Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCGGCGGAACGACGAGGAATGACGGCAAGGGACGACAACGACGATGGAATGGAAGGTGGCGAGCTACGGACGGCAAAGCCTCGACGGTTCTCTCTTCTCCCTTTTCCTTTCGGTTTTAGTTCTGTGAAATACAGAACTGAATCGTTTATAAAGGGGATTTCCCAACGCAGTCGTGTGGCGTCAGGAAATCTCCAAAAAGGCATCAGGAATAATGGTATTCCTGATGCTCATTAA mRNA sequence ATGGCGGCGGAACGACGAGGAATGACGGCAAGGGACGACAACGACGATGGAATGGAAGGTGGCGAGCTACGGACGGCAAAGCCTCGACGGTTCTCTCTTCTCCCTTTTCCTTTCGGTTTTAGTTCTGTGAAATACAGAACTGAATCGTTTATAAAGGGGATTTCCCAACGCAGTCGTGTGGCGTCAGGAAATCTCCAAAAAGGCATCAGGAATAATGGTATTCCTGATGCTCATTAA Coding sequence (CDS) ATGGCGGCGGAACGACGAGGAATGACGGCAAGGGACGACAACGACGATGGAATGGAAGGTGGCGAGCTACGGACGGCAAAGCCTCGACGGTTCTCTCTTCTCCCTTTTCCTTTCGGTTTTAGTTCTGTGAAATACAGAACTGAATCGTTTATAAAGGGGATTTCCCAACGCAGTCGTGTGGCGTCAGGAAATCTCCAAAAAGGCATCAGGAATAATGGTATTCCTGATGCTCATTAA Protein sequence MAAERRGMTARDDNDDGMEGGELRTAKPRRFSLLPFPFGFSSVKYRTESFIKGISQRSRVASGNLQKGIRNNGIPDAH
Homology
BLAST of IVF0019527 vs. NCBI nr
Match: KAA0056303.1 (putative bromodomain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 47.8 bits (112), Expect = 2.48e-04 Identity = 26/51 (50.98%), Postives = 31/51 (60.78%), Query Frame = 0
Query: 6 RGMTARDDNDDGMEGGELRTAKPRRFSLLPFPFGFS-SVKYRTESFIKGIS 55
R MTARD NDDGM+GGELRTA PFPF F VK + + + +S
Sbjct: 77 RRMTARDSNDDGMDGGELRTAMNVSLFSEPFPFCFQFCVKQKRNKYSEDLS 127
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAA0056303.1 | 2.48e-04 | 50.98 | putative bromodomain-containing protein [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..26 |
Relationships
The following mRNA feature(s) are a part of this gene:
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