IVF0019462 (gene) Melon (IVF77) v1

Overview


Name	IVF0019462
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	HNH domain-containing protein
Location	chr02: 21597938 .. 21600554 (+)
RNA-Seq Expression	IVF0019462
Synteny	IVF0019462

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCGAAGCAAGGAATCGAAGAAGAAAACTCGCCCCTCGTCACCGCTCAGGGACCGAACTGGTGCTCCAACAAGTCTCGAATCGACGCGTTATGGGTCTCACCCATCAAGCCTCAGCCCCTCTGCATCCCTTCTGGACCGGGACCTCGTCACCGGCGAATCCAATCTCCTCGGAGACCTAAAATTCTCTCCCAATGACTCAGTTTCCAACTACAATCCCGGAGCTTTCCTCATAGTGTGAAGCAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGAGACCCAGATCGCTGGCGACGGGATGCTCTTGGTAACACTGTTTTTCGAAAGCTTGTTGGCTGCCCCGGTTGTCTCTGTCATGACTATGATCACATTTTGCCTTACTCTAAGGTAGTTCCCCTTTCCGAATTCTGATTTTTTGTAATTCCTCTGTTTTAGGACTGTTGTGAGGTGTTTTTGTTTCGTTTTCGTAATTTAGGCTGTGGGATGGAAATGAGTAAGAACTCTTGATAATGTGTTCATTAGAGACATGGTAATACATTACTTCCAATTCTAGTTGGCCCATGCTGAAATTAGCTTGGTGGGTTCTTCTTCTTTGTACATATATGGGTTAGGCTTGTCATTTTTAATGTATCGTGACTTGAAAATCTTCAATTTCTGTTTCTATTTAGACTATCACATGTATTTAACAAGTTGTTTTCAATTATAGTATTGGATATTTGACGATTGTATATGGTTGTGGAATTGTTTTATAATCTTCTCTTCTCTCTCTCTCCCAGAAGATTTGTGTACAATATTGTTTTTTTATTGCTTCCTAAGTTTTTGTGGACTTTACCAACCAAAGAGATAGCATTGGAAGATGTCTAACAGTTTATGCGAATGGAAGCTTAGTATGGGCAACTAAATGTGTTAAGAAATGAATGAACCAATGAAATGAAAATTAAATTACTTTGGATACAGTTAATTATCAGTAAGCATGAACTTCTTTGTGACTTCAAAATTTCAAGGGAGGTTTGGGATCTTAATTCTAATTGATTGTGAATATTCCATTAGTCATCCCTTCAGTATCATTTTTTCTATTTTCTGAAAAGTTGAGTACGAGGTTCCAAGAGTCTACATGTTATGAAGTATCTTTGCCATATTTATTTCTTAATAAATTCAGTAAGTGTTCATGAGTTACTCTTCGGGCTGAATATGAATACTTCATATTGCAGGGAGGAAAGAGCACACTAGAAAATTGTCAGGTTTTGCAGGTAATAATCCTAACGACTTTCCTTTGTCCCATCCAAACTTCACTTAGTATTGTTTTCAACCTTCGCTTAGTTTGCGCTGTTTTTCGGAAGATAGGCAGCATTAAGGAGGACCAAGAGGATATTATATTATAGAGGACAGAGCTACTGATTGTTCTGTTTGCTAAATAATGTGTCCCCCATGGCCAGATGTTACTACATAATAGTTCTTAATGCTTTGTTGACCGTGCTTCTGACTGTCTTTTCAATTATTTGATTGTCTCATCTCTCAAACTTTTCCTTTCACGTACTGAAGGATGAACACTGTTCCCTCATGGCTTGTCATAGTTGATTGTTCTTCTTTAACCAGGGACCTGCCCTTAGATACTAGAGTTTACAAGAGTTAATTACTTGCTAGATTATAATTGAAAATTCTTTATTCAGATTTTTCTATTCATCATGTGCAAGAGGACGTTACATAGTTTTACATTTGACTCTTTTACATTATTCACTATTGTAAAGTCAGAGGGTTGTTAATCCGGGAAGGACGTACAATCACGCAGCATTGTGGTTAATACATCTTGTCTTTGTTTAAATTTACTTCCCAAATAACTTTGGAAGCCAAAACTTTGATTCAATCATTTTTTGAAGAATCATTTTAAATTTAATTATTCAAAAGATACTTCTTAAGTGATTCAATCACTTTGGAACCAATTTTACTGTGATTTATTATTTGTAGAATCGGCTTTAGATATAGTGCAACAAAACAAACTTGATTAAAAATCACCTTTAGAAAATGTATCCACACTAGAATTTTAATTAAAATAAATTTTCTTAAGAGGTACCGATCGAATACAAAAATACCACACTACTAACTGTTATATATTTGGTGGTTTGCTATAATTTCTATATCTCATAACAGTTTGAATTATTTTGTTTGCCAATAATTTCAAATAATTGGTTTCGTTACTCAAACGATTCTTTATTGCAAGAAAGAATTCTTCCAAATTCCTACTCCCAATTCCCTTCATCTTCTTCTTATTTTTTTTTTCTATGTTGTTTAGTAGTTAGCATATTGCGTTATGATTATTATCTTCTGATGGCTGTATTATTCACGATGTAGGCAACTGTGAATCGATCAAAGGGAAACCGGACAGAAATTTCGAGGGCAGAACTAATACAGAAAAGCTCTTACTGCCGGGTTTCAGGTACATTAGCCTGATTAAACAACATATCTAAGGGTATTCACTTACACCTTGGTGATGATATCATATGGTCAATATGTTTACATAATTTACAGGTCGAGACATGGATCTTCTTGAACTATCTGCCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGCTGTAGAATTCAATGA

mRNA sequence

ATGAGGCGAAGCAAGGAATCGAAGAAGAAAACTCGCCCCTCGTCACCGCTCAGGGACCGAACTGGTGCTCCAACAAGTCTCGAATCGACGCGTTATGGGTCTCACCCATCAAGCCTCAGCCCCTCTGCATCCCTTCTGGACCGGGACCTCGTCACCGGCGAATCCAATCTCCTCGGAGACCTAAAATTCTCTCCCAATGACTCACAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGAGACCCAGATCGCTGGCGACGGGATGCTCTTGGTAACACTGTTTTTCGAAAGCTTGTTGGCTGCCCCGGTTGTCTCTGTCATGACTATGATCACATTTTGCCTTACTCTAAGGGAGGAAAGAGCACACTAGAAAATTGTCAGGTTTTGCAGGCAACTGTGAATCGATCAAAGGGAAACCGGACAGAAATTTCGAGGGCAGAACTAATACAGAAAAGCTCTTACTGCCGGGTTTCAGGTCGAGACATGGATCTTCTTGAACTATCTGCCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGCTGTAGAATTCAATGA

Coding sequence (CDS)

ATGAGGCGAAGCAAGGAATCGAAGAAGAAAACTCGCCCCTCGTCACCGCTCAGGGACCGAACTGGTGCTCCAACAAGTCTCGAATCGACGCGTTATGGGTCTCACCCATCAAGCCTCAGCCCCTCTGCATCCCTTCTGGACCGGGACCTCGTCACCGGCGAATCCAATCTCCTCGGAGACCTAAAATTCTCTCCCAATGACTCACAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGAGACCCAGATCGCTGGCGACGGGATGCTCTTGGTAACACTGTTTTTCGAAAGCTTGTTGGCTGCCCCGGTTGTCTCTGTCATGACTATGATCACATTTTGCCTTACTCTAAGGGAGGAAAGAGCACACTAGAAAATTGTCAGGTTTTGCAGGCAACTGTGAATCGATCAAAGGGAAACCGGACAGAAATTTCGAGGGCAGAACTAATACAGAAAAGCTCTTACTGCCGGGTTTCAGGTCGAGACATGGATCTTCTTGAACTATCTGCCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGCTGTAGAATTCAATGA

Protein sequence

MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGDLKFSPNDSQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

Homology

[Close]

BLAST of IVF0019462 vs. ExPASy TrEMBL
Match: A0A5A7US43 (HNH endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002510 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.2e-98
Identity = 186/200 (93.00%), Postives = 186/200 (93.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60
           MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60

Query: 61  LKFSPNDS--------------QQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKFSPNDS              QQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 187
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of IVF0019462 vs. ExPASy TrEMBL
Match: A0A1S3BWU4 (uncharacterized protein LOC103493997 OS=Cucumis melo OX=3656 GN=LOC103493997 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.2e-98
Identity = 186/200 (93.00%), Postives = 186/200 (93.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60
           MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60

Query: 61  LKFSPNDS--------------QQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKFSPNDS              QQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 187
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of IVF0019462 vs. ExPASy TrEMBL
Match: A0A0A0LUI5 (HNH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009800 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.2e-95
Identity = 181/200 (90.50%), Postives = 184/200 (92.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60
           MRRSKESKKKTRPSSPLRDRTG+PTSLES  YGSHPSSLSPSASLLDRDLVTGES+LLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD 60

Query: 61  LKFSPNDS--------------QQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKFSP+DS              QQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 187
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of IVF0019462 vs. ExPASy TrEMBL
Match: A0A6J1I688 (uncharacterized protein LOC111471489 OS=Cucurbita maxima OX=3661 GN=LOC111471489 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.1e-88
Identity = 169/200 (84.50%), Postives = 174/200 (87.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60
           MR SKESKKKTRPSSPLRDRT   T  ES R+GS+ S LSPS SLLDRDLVT E+NLLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSNSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKFSPNDS--------------QQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SP+DS              QQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 187
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of IVF0019462 vs. ExPASy TrEMBL
Match: A0A6J1EZE0 (uncharacterized protein LOC111440950 OS=Cucurbita moschata OX=3662 GN=LOC111440950 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.2e-87
Identity = 168/200 (84.00%), Postives = 172/200 (86.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60
           MR SKESKKKTRPSSPLRDRT      ES R+GSH S LSPS SLLDRDLVT E+NLLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSKRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKFSPNDS--------------QQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SP+DS              QQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 187
           ELSAYGNVHRGQD GGCRIQ
Sbjct: 181 ELSAYGNVHRGQDPGGCRIQ 200

[Close]

BLAST of IVF0019462 vs. NCBI nr
Match: XP_008453210.1 (PREDICTED: uncharacterized protein LOC103493997 [Cucumis melo] >KAA0057948.1 HNH endonuclease [Cucumis melo var. makuwa])

HSP 1 Score: 370 bits (950), Expect = 5.71e-129
Identity = 186/200 (93.00%), Postives = 186/200 (93.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60
           MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60

Query: 61  LKFSPNDS--------------QQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKFSPNDS              QQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 186
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of IVF0019462 vs. NCBI nr
Match: XP_004138170.1 (uncharacterized protein LOC101222461 [Cucumis sativus] >KGN63676.1 hypothetical protein Csa_013308 [Cucumis sativus])

HSP 1 Score: 360 bits (924), Expect = 5.26e-125
Identity = 181/200 (90.50%), Postives = 184/200 (92.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60
           MRRSKESKKKTRPSSPLRDRTG+PTSLES  YGSHPSSLSPSASLLDRDLVTGES+LLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD 60

Query: 61  LKFSPNDS--------------QQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKFSP+DS              QQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 186
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of IVF0019462 vs. NCBI nr
Match: XP_038880609.1 (uncharacterized protein LOC120072255 [Benincasa hispida])

HSP 1 Score: 345 bits (884), Expect = 6.59e-119
Identity = 173/200 (86.50%), Postives = 179/200 (89.50%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60
           MRR+KESKKKTR SSPLRDRTG PTSLES RYGS+PSSLSPSASLLDRDL+TGE++LLGD
Sbjct: 1   MRRNKESKKKTRSSSPLRDRTGDPTSLESRRYGSNPSSLSPSASLLDRDLITGEASLLGD 60

Query: 61  LKFSPND--------------SQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SP+D               QQCWDKAEKIKGRDP RWRRDALGN VFRKLVGCPGCL
Sbjct: 61  LKLSPDDLVSDYNPRSFPHSVKQQCWDKAEKIKGRDPSRWRRDALGNIVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 186
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of IVF0019462 vs. NCBI nr
Match: XP_023529236.1 (uncharacterized protein LOC111792136 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335 bits (859), Expect = 4.26e-115
Identity = 169/200 (84.50%), Postives = 173/200 (86.50%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60
           MR SKESKKKTRPSSPLRDRT   T  ES R+GSH S LSPS SLLDRDLVT E+NLLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKFSPNDS--------------QQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SP+ S              QQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDHSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 186
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of IVF0019462 vs. NCBI nr
Match: XP_022972967.1 (uncharacterized protein LOC111471489 [Cucurbita maxima])

HSP 1 Score: 335 bits (859), Expect = 4.26e-115
Identity = 169/200 (84.50%), Postives = 174/200 (87.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60
           MR SKESKKKTRPSSPLRDRT   T  ES R+GS+ S LSPS SLLDRDLVT E+NLLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSNSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKFSPNDS--------------QQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SP+DS              QQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 186
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of IVF0019462 vs. TAIR 10
Match: AT3G47490.1 (HNH endonuclease )

HSP 1 Score: 222.6 bits (566), Expect = 2.6e-58
Identity = 120/191 (62.83%), Postives = 135/191 (70.68%), Query Frame = 0


Query: 4   SKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRD---LVTGESNLLGD 63
           S  S  KTRP       +G+P        G     +  SA+LLDR+   L  G     GD
Sbjct: 53  SSSSPSKTRPEL----SSGSPNRNTGEARG---GKVKTSATLLDREEMGLFPGSG--YGD 112

Query: 64  LKFSPND-----SQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILP 123
               P        QQCW+KAEKIKGRDP+RWRRD LGN VFRKLVGCPGCLCHDYDHI+P
Sbjct: 113 PNPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLCHDYDHIVP 172

Query: 124 YSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVH 183
           YSKGGKSTLENCQVLQA VNRSKGN+T+ISR+ELIQ+SSYCRV+GRDMDL+EL+AYGNV 
Sbjct: 173 YSKGGKSTLENCQVLQAKVNRSKGNKTDISRSELIQRSSYCRVAGRDMDLIELTAYGNVQ 232

Query: 184 RGQDSGGCRIQ 187
           R   S GCRIQ
Sbjct: 233 RAPTSSGCRIQ 234

[Close]

BLAST of IVF0019462 vs. TAIR 10
Match: AT3G47490.3 (HNH endonuclease )

HSP 1 Score: 210.7 bits (535), Expect = 1.0e-54
Identity = 120/211 (56.87%), Postives = 135/211 (63.98%), Query Frame = 0


Query: 4   SKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRD---LVTGESNLLGD 63
           S  S  KTRP       +G+P        G     +  SA+LLDR+   L  G     GD
Sbjct: 14  SSSSPSKTRPEL----SSGSPNRNTGEARG---GKVKTSATLLDREEMGLFPGSG--YGD 73

Query: 64  LKFSPND-----SQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILP 123
               P        QQCW+KAEKIKGRDP+RWRRD LGN VFRKLVGCPGCLCHDYDHI+P
Sbjct: 74  PNPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLCHDYDHIVP 133

Query: 124 YS--------------------KGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSY 183
           YS                    KGGKSTLENCQVLQA VNRSKGN+T+ISR+ELIQ+SSY
Sbjct: 134 YSKDMCPLEHAFDEPHKDFLDLKGGKSTLENCQVLQAKVNRSKGNKTDISRSELIQRSSY 193

Query: 184 CRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ 187
           CRV+GRDMDL+EL+AYGNV R   S GCRIQ
Sbjct: 194 CRVAGRDMDLIELTAYGNVQRAPTSSGCRIQ 215

[Close]

BLAST of IVF0019462 vs. TAIR 10
Match: AT1G18680.1 (HNH endonuclease domain-containing protein )

HSP 1 Score: 114.0 bits (284), Expect = 1.3e-25
Identity = 49/122 (40.16%), Postives = 73/122 (59.84%), Query Frame = 0


Query: 63  FSPNDSQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKS 122
           F      +CW  A+ + GR P+RWR+D  GN V ++   C GCLC +YDHI+PYSKGG+S
Sbjct: 43  FDGKAKNKCWANADIVPGRHPERWRKDVAGNIVCKRFGNCNGCLCFEYDHIVPYSKGGES 102

Query: 123 TLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGG 182
             ENCQ+LQ  VNR K  +  +    L   S   + + +++D++E++ YG+V R      
Sbjct: 103 IAENCQILQTRVNRFKSAQENVDATTLKSYSCGLQFTDKELDVIEMAVYGDVLRPGKECR 162

Query: 183 CR 185
           C+
Sbjct: 163 CK 164

[Close]

BLAST of IVF0019462 vs. TAIR 10
Match: AT3G47490.2 (HNH endonuclease )

HSP 1 Score: 111.3 bits (277), Expect = 8.4e-25
Identity = 65/123 (52.85%), Postives = 73/123 (59.35%), Query Frame = 0


Query: 4   SKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRD---LVTGESNLLGD 63
           S  S  KTRP       +G+P        G     +  SA+LLDR+   L  G     GD
Sbjct: 53  SSSSPSKTRPEL----SSGSPNRNTGEARG---GKVKTSATLLDREEMGLFPGSG--YGD 112

Query: 64  LKFSPND-----SQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILP 119
               P        QQCW+KAEKIKGRDP+RWRRD LGN VFRKLVGCPGCLCHDYDHI+P
Sbjct: 113 PNPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLCHDYDHIVP 166

The following BLAST results are available for this feature:

BLAST of IVF0019462 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0019462 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7US43	1.2e-98	93.00	HNH endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002...	[more]
A0A1S3BWU4	1.2e-98	93.00	uncharacterized protein LOC103493997 OS=Cucumis melo OX=3656 GN=LOC103493997 PE=...	[more]
A0A0A0LUI5	1.2e-95	90.50	HNH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009800 PE=4 SV...	[more]
A0A6J1I688	4.1e-88	84.50	uncharacterized protein LOC111471489 OS=Cucurbita maxima OX=3661 GN=LOC111471489...	[more]
A0A6J1EZE0	1.2e-87	84.00	uncharacterized protein LOC111440950 OS=Cucurbita moschata OX=3662 GN=LOC1114409...	[more]

BLAST of IVF0019462 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453210.1	5.71e-129	93.00	PREDICTED: uncharacterized protein LOC103493997 [Cucumis melo] >KAA0057948.1 HNH...	[more]
XP_004138170.1	5.26e-125	90.50	uncharacterized protein LOC101222461 [Cucumis sativus] >KGN63676.1 hypothetical ...	[more]
XP_038880609.1	6.59e-119	86.50	uncharacterized protein LOC120072255 [Benincasa hispida]	[more]
XP_023529236.1	4.26e-115	84.50	uncharacterized protein LOC111792136 [Cucurbita pepo subsp. pepo]	[more]
XP_022972967.1	4.26e-115	84.50	uncharacterized protein LOC111471489 [Cucurbita maxima]	[more]

BLAST of IVF0019462 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47490.1	2.6e-58	62.83	HNH endonuclease	[more]
AT3G47490.3	1.0e-54	56.87	HNH endonuclease	[more]
AT1G18680.1	1.3e-25	40.16	HNH endonuclease domain-containing protein	[more]
AT3G47490.2	8.4e-25	52.85	HNH endonuclease	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002711	HNH endonuclease	PFAM	PF01844	HNH	coord: 108..141 e-value: 1.3E-4 score: 22.0
None	No IPR available	GENE3D	1.10.30.50		coord: 66..162 e-value: 4.8E-8 score: 34.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..45
None	No IPR available	PANTHER	PTHR33427:SF3	HNH ENDONUCLEASE	coord: 5..186
None	No IPR available	PANTHER	PTHR33427	HNH ENDONUCLEASE	coord: 5..186
IPR003615	HNH nuclease	CDD	cd00085	HNHc	coord: 95..139 e-value: 1.21386E-5 score: 39.3772

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0019462.2	IVF0019462.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding