IVF0019411 (gene) Melon (IVF77) v1

Overview
NameIVF0019411
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein MNN4-like
Locationchr06: 18669439 .. 18669684 (+)
RNA-Seq ExpressionIVF0019411
SyntenyIVF0019411
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGTAAAGCAAGCTCTCACGGAAGCCCTCATGAAATACCAACAAATTGTTGGTAAAGCAAGTCTGTCCAATGCAAAGGCTGAGAAAACTCCATCTGGCAGTCCTATGTTGGAGAAAAGAACAGAAAAATGCCTATTCAAGAAGGTGGTCATCAATGAAGTAGAAATTCAACTCCCTGAGGATAAGTTGAGTGACCTTCTCATAATAGTCTCTAGAGAGACTTCAAAGAGAGAAGAAGAATAA

mRNA sequence

ATGTCTGTAAAGCAAGCTCTCACGGAAGCCCTCATGAAATACCAACAAATTGTTGGTAAAGCAAGTCTGTCCAATGCAAAGGCTGAGAAAACTCCATCTGGCAGTCCTATGTTGGAGAAAAGAACAGAAAAATGCCTATTCAAGAAGGTGGTCATCAATGAAGTAGAAATTCAACTCCCTGAGGATAAGTTGAGTGACCTTCTCATAATAGTCTCTAGAGAGACTTCAAAGAGAGAAGAAGAATAA

Coding sequence (CDS)

ATGTCTGTAAAGCAAGCTCTCACGGAAGCCCTCATGAAATACCAACAAATTGTTGGTAAAGCAAGTCTGTCCAATGCAAAGGCTGAGAAAACTCCATCTGGCAGTCCTATGTTGGAGAAAAGAACAGAAAAATGCCTATTCAAGAAGGTGGTCATCAATGAAGTAGAAATTCAACTCCCTGAGGATAAGTTGAGTGACCTTCTCATAATAGTCTCTAGAGAGACTTCAAAGAGAGAAGAAGAATAA

Protein sequence

MSVKQALTEALMKYQQIVGKASLSNAKAEKTPSGSPMLEKRTEKCLFKKVVINEVEIQLPEDKLSDLLIIVSRETSKREEE
Homology
BLAST of IVF0019411 vs. ExPASy TrEMBL
Match: A0A5D3BV17 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001510 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.1e-32
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0

Query: 1  MSVKQALTEALMKYQQIVGKASLSNAKAEKTPSGSPMLEKRTEKCLFKKVVINEVEIQLP 60
          MSVKQALTEALMKYQQIVGKASLSNAKAEKTPSGSPMLEKRTEKCLFKKVVINEVEIQLP
Sbjct: 1  MSVKQALTEALMKYQQIVGKASLSNAKAEKTPSGSPMLEKRTEKCLFKKVVINEVEIQLP 60

Query: 61 EDKLSDLLIIVSRETSKREEE 82
          EDKLSDLLIIVSRETSKREEE
Sbjct: 61 EDKLSDLLIIVSRETSKREEE 81

BLAST of IVF0019411 vs. ExPASy TrEMBL
Match: A0A5A7V2G2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005880 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.4e-29
Identity = 76/81 (93.83%), Postives = 78/81 (96.30%), Query Frame = 0

Query: 1  MSVKQALTEALMKYQQIVGKASLSNAKAEKTPSGSPMLEKRTEKCLFKKVVINEVEIQLP 60
          MSVKQALTEALMKYQQIVGKASLSN +AEKTPSGSPMLEKRTEKCLF+KVVINEVEIQL 
Sbjct: 1  MSVKQALTEALMKYQQIVGKASLSNPRAEKTPSGSPMLEKRTEKCLFEKVVINEVEIQLS 60

Query: 61 EDKLSDLLIIVSRETSKREEE 82
          EDKLSDLLIIVS ETSKREEE
Sbjct: 61 EDKLSDLLIIVSGETSKREEE 81

BLAST of IVF0019411 vs. ExPASy TrEMBL
Match: A0A5A7SUZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G00150 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.0e-11
Identity = 47/73 (64.38%), Postives = 53/73 (72.60%), Query Frame = 0

Query: 9  EALMKYQQIVGKASLSNAKAEKTPSGSPMLEKRTEKCLFKKVVINEVEIQLPEDKLSDLL 68
          +AL KYQ  VGKASLSN  AEKTPS   + E+R EK   K V+IN VEIQL EDKL DLL
Sbjct: 5  QALKKYQGTVGKASLSNEGAEKTPSDGLVSEQRKEKRPLKMVIINGVEIQLTEDKLGDLL 64

Query: 69 IIVSRETSKREEE 82
           I+  ETSKRE+E
Sbjct: 65 AIIFGETSKREDE 77

BLAST of IVF0019411 vs. ExPASy TrEMBL
Match: A0A0A0K8A0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336460 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.0e-11
Identity = 48/78 (61.54%), Postives = 57/78 (73.08%), Query Frame = 0

Query: 4  KQALTEALMKYQQIVGKASLSNAKAEKTPSGSPMLEKRTEKCLFKKVVINEVEIQLPEDK 63
          KQ LT+AL KYQ  VGKAS  +   E +P GS +LE+R E+   K VVIN V+IQL EDK
Sbjct: 4  KQDLTKALKKYQATVGKASPFSDGVEHSPFGSLVLEQRKEEIQLKMVVINGVKIQLLEDK 63

Query: 64 LSDLLIIVSRETSKREEE 82
          L +LL IVSRETSKRE+E
Sbjct: 64 LGNLLAIVSRETSKREKE 81

BLAST of IVF0019411 vs. ExPASy TrEMBL
Match: A0A5D3C865 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001870 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.7e-09
Identity = 42/73 (57.53%), Postives = 53/73 (72.60%), Query Frame = 0

Query: 9  EALMKYQQIVGKASLSNAKAEKTPSGSPMLEKRTEKCLFKKVVINEVEIQLPEDKLSDLL 68
          +AL KYQ  +GKAS SN   E +P+  P+LE++ EK   K V IN V+IQLPEDKL DLL
Sbjct: 21 QALKKYQATLGKASPSNEAVEHSPASGPVLEEK-EKIPLKIVFINRVKIQLPEDKLQDLL 80

Query: 69 IIVSRETSKREEE 82
           IVS ETS++EE+
Sbjct: 81 AIVSGETSRKEED 92

BLAST of IVF0019411 vs. NCBI nr
Match: TYK03307.1 (hypothetical protein E5676_scaffold298G001510 [Cucumis melo var. makuwa])

HSP 1 Score: 149 bits (377), Expect = 3.56e-45
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0

Query: 1  MSVKQALTEALMKYQQIVGKASLSNAKAEKTPSGSPMLEKRTEKCLFKKVVINEVEIQLP 60
          MSVKQALTEALMKYQQIVGKASLSNAKAEKTPSGSPMLEKRTEKCLFKKVVINEVEIQLP
Sbjct: 1  MSVKQALTEALMKYQQIVGKASLSNAKAEKTPSGSPMLEKRTEKCLFKKVVINEVEIQLP 60

Query: 61 EDKLSDLLIIVSRETSKREEE 81
          EDKLSDLLIIVSRETSKREEE
Sbjct: 61 EDKLSDLLIIVSRETSKREEE 81

BLAST of IVF0019411 vs. NCBI nr
Match: KAA0060686.1 (hypothetical protein E6C27_scaffold22G005880 [Cucumis melo var. makuwa])

HSP 1 Score: 139 bits (350), Expect = 4.69e-41
Identity = 76/81 (93.83%), Postives = 78/81 (96.30%), Query Frame = 0

Query: 1  MSVKQALTEALMKYQQIVGKASLSNAKAEKTPSGSPMLEKRTEKCLFKKVVINEVEIQLP 60
          MSVKQALTEALMKYQQIVGKASLSN +AEKTPSGSPMLEKRTEKCLF+KVVINEVEIQL 
Sbjct: 1  MSVKQALTEALMKYQQIVGKASLSNPRAEKTPSGSPMLEKRTEKCLFEKVVINEVEIQLS 60

Query: 61 EDKLSDLLIIVSRETSKREEE 81
          EDKLSDLLIIVS ETSKREEE
Sbjct: 61 EDKLSDLLIIVSGETSKREEE 81

BLAST of IVF0019411 vs. NCBI nr
Match: KGN44567.1 (hypothetical protein Csa_016483 [Cucumis sativus])

HSP 1 Score: 78.6 bits (192), Expect = 1.19e-16
Identity = 48/78 (61.54%), Postives = 57/78 (73.08%), Query Frame = 0

Query: 4  KQALTEALMKYQQIVGKASLSNAKAEKTPSGSPMLEKRTEKCLFKKVVINEVEIQLPEDK 63
          KQ LT+AL KYQ  VGKAS  +   E +P GS +LE+R E+   K VVIN V+IQL EDK
Sbjct: 4  KQDLTKALKKYQATVGKASPFSDGVEHSPFGSLVLEQRKEEIQLKMVVINGVKIQLLEDK 63

Query: 64 LSDLLIIVSRETSKREEE 81
          L +LL IVSRETSKRE+E
Sbjct: 64 LGNLLAIVSRETSKREKE 81

BLAST of IVF0019411 vs. NCBI nr
Match: KAA0033147.1 (hypothetical protein E6C27_scaffold269G002910 [Cucumis melo var. makuwa] >TYK17087.1 hypothetical protein E5676_scaffold1032G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 79.7 bits (195), Expect = 1.37e-15
Identity = 47/73 (64.38%), Postives = 53/73 (72.60%), Query Frame = 0

Query: 9  EALMKYQQIVGKASLSNAKAEKTPSGSPMLEKRTEKCLFKKVVINEVEIQLPEDKLSDLL 68
          +AL KYQ  VGKASLSN  AEKTPS   + E+R EK   K V+IN VEIQL EDKL DLL
Sbjct: 5  QALKKYQGTVGKASLSNEGAEKTPSDGLVSEQRKEKRPLKMVIINGVEIQLTEDKLGDLL 64

Query: 69 IIVSRETSKREEE 81
           I+  ETSKRE+E
Sbjct: 65 AIIFGETSKREDE 77

BLAST of IVF0019411 vs. NCBI nr
Match: KAA0048215.1 (hypothetical protein E6C27_scaffold63G001290 [Cucumis melo var. makuwa] >TYK08041.1 hypothetical protein E5676_scaffold265G001870 [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 1.49e-13
Identity = 42/73 (57.53%), Postives = 53/73 (72.60%), Query Frame = 0

Query: 9  EALMKYQQIVGKASLSNAKAEKTPSGSPMLEKRTEKCLFKKVVINEVEIQLPEDKLSDLL 68
          +AL KYQ  +GKAS SN   E +P+  P+LE++ EK   K V IN V+IQLPEDKL DLL
Sbjct: 21 QALKKYQATLGKASPSNEAVEHSPASGPVLEEK-EKIPLKIVFINRVKIQLPEDKLQDLL 80

Query: 69 IIVSRETSKREEE 81
           IVS ETS++EE+
Sbjct: 81 AIVSGETSRKEED 92

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BV171.1e-32100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V2G21.4e-2993.83Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7SUZ41.0e-1164.38Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K8A03.0e-1161.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336460 PE=4 SV=1[more]
A0A5D3C8651.7e-0957.53Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
TYK03307.13.56e-45100.00hypothetical protein E5676_scaffold298G001510 [Cucumis melo var. makuwa][more]
KAA0060686.14.69e-4193.83hypothetical protein E6C27_scaffold22G005880 [Cucumis melo var. makuwa][more]
KGN44567.11.19e-1661.54hypothetical protein Csa_016483 [Cucumis sativus][more]
KAA0033147.11.37e-1564.38hypothetical protein E6C27_scaffold269G002910 [Cucumis melo var. makuwa] >TYK170... [more]
KAA0048215.11.49e-1357.53hypothetical protein E6C27_scaffold63G001290 [Cucumis melo var. makuwa] >TYK0804... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0019411.1IVF0019411.1mRNA