Homology
BLAST of IVF0019368 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 553.5 bits (1425), Expect = 6.8e-156
Identity = 419/1436 (29.18%), Postives = 677/1436 (47.14%), Query Frame = 0
Query: 62 NYGVWSQMVEVLLASKDKLGHINGERTQPASN---------DTGYKRWMSDNSMVKGWIL 121
NY +WS+ V L + G ++G T P + + Y RW + ++ +L
Sbjct: 30 NYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLIYSAVL 89
Query: 122 SSLDPNLIGNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKV-YGLKQTGTLEDYFYT 181
++ ++ R +TA ++W++++ + + + + L ++ K T T++DY
Sbjct: 90 GAISMSVQPAVSRATTAAQIWETLRKIYANPSYG-HVTQLRTQLKQWTKGTKTIDDY--- 149
Query: 182 LQGLWKEIEFRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPT 241
+QGL F + + P+D D +V L L + + + +I PT
Sbjct: 150 MQGL--VTRFDQLALLGKPMD--------HDEQVERVLENLPEEYKPVIDQIAAKDTPPT 209
Query: 242 VEETYGHVRREDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSVQE 301
+ E + + ++ +S L+ S A ++ V H +T +T+ N+N +
Sbjct: 210 LTE---------IHERLLNHESKILAVSSATVIPITAN--AVSHRNTTTTNNNNNGN--- 269
Query: 302 IHCLCHRRYRERNPVLIKVLYTLQHDTTKLKQFSSAPTVAAKAIVKTPVLKSMDWYKELK 361
+ RY RN ++ +K Q SS K + K +
Sbjct: 270 ----RNNRYDNRN----------NNNNSKPWQQSSTNFHPNNNQSKPYLGKC----QICG 329
Query: 362 KKQAEAKR-GKVSIAVSGKNGDDSPS-------EGIIFLSSNLSNDNSTWIVDSGASDHM 421
+ AKR ++ +S N PS + L S S++N W++DSGA+ H+
Sbjct: 330 VQGHSAKRCSQLQHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSNN--WLLDSGATHHI 389
Query: 422 TFTKTDLTA-ECVTKKTEILNANGISYPVKCAGSIKVTSQ---LNLSNVLVVPSLATRLM 481
T +L+ + T +++ A+G + P+ GS ++++ LNL N+L VP++ L+
Sbjct: 390 TSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLI 449
Query: 482 SVSKLTKDRNCVVKMYSDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEV 541
SV +L V+ + F ++D+ T + +G +D LY + +L +
Sbjct: 450 SVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSK 509
Query: 542 QNKIWTWHRRLGHPSLGYMKKLLPRLFKNNNLTVFN-------CDTCIKAKSHRVSYAPS 601
+WH RLGHP+ +L + N +L+V N C C+ KS++V ++ S
Sbjct: 510 ATHS-SWHARLGHPA----PSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQS 569
Query: 602 SNKSNSPFDLIHSDVWGPAPVSSIDGNKWFVLFIDDCTRMTWVYLLKSKDEVPSVFKKFY 661
+ S P + I+SDVW +P+ S D +++V+F+D TR TW+Y LK K +V F F
Sbjct: 570 TINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFK 629
Query: 662 TMIKTQFGKGIKFFRSDNGGEFIGKVLKDFFVQMGIVHETSCVGTPQQNGVAERKNRHIL 721
+++ +F I F SDNGGEF+ L ++F Q GI H TS TP+ NG++ERK+RHI+
Sbjct: 630 NLLENRFQTRIGTFYSDNGGEFV--ALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIV 689
Query: 722 EMSRALLFEYHVPTKFWDKSILMAVYVLNRLPTKINNFQTPLKTLEKHHSIPSVLSLTPK 781
E LL +P +W + +AVY++NRLPT + ++P + L + P+ L +
Sbjct: 690 ETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKL--FGTSPNYDKL--R 749
Query: 782 IFGCVAYVHVPKTQRSKLSPCAVRCVFLGFGQNQKGYKCFDVDSRKWYVTMDVTFVEH-- 841
+FGC Y + + KL + +CVFLG+ Q Y C + + + Y++ V F E+
Sbjct: 750 VFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCF 809
Query: 842 -EAFFKPTIQSDQGENSSESDVWKNKDLLSFQGWTL---------------------YGQ 901
+ + T+ Q + S VW L + L +
Sbjct: 810 PFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRN 869
Query: 902 DGVSGTDESDGNGNGTDESDGDGNGATDGNKPLEMYSRNKNRAVFGMESENEEVIQP-NE 961
VS ++ + S +G +P ++ + + S+N P NE
Sbjct: 870 SQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQT---HSSQNTSQNNPTNE 929
Query: 962 EPQ---GPMSPEDQLQVSLPTSKYTLPVRCNRGIPPK--RYEPD---EDRHKKSKYPI-A 1021
P +S Q S P+ + PP + P + + ++ P+
Sbjct: 930 SPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNT 989
Query: 1022 NFVDTKSLSGPVKRFNENLLSCKI-----PENVDEAKSDPNWSQAMEAEMSALYNNKTWT 1081
+ + T++ +G +K + L+ + P +A D W AM +E++A N TW
Sbjct: 990 HSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWD 1049
Query: 1082 LVELPQGKIP-VGCRWVFSIKYNANGEIDRYKARLVAKGYTQ------------------ 1141
LV P + VGCRW+F+ KYN++G ++RYKARLVAKGY Q
Sbjct: 1050 LVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTS 1109
Query: 1142 -------------------TQECFLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYGL 1201
FL G L ++VYM QPPG+ + VCKL KALYGL
Sbjct: 1110 IRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGL 1169
Query: 1202 KQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIAT 1261
KQ+PRAW+ + + GF SD +LF+ + + + +++YVDD+++TGND +
Sbjct: 1170 KQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHN 1229
Query: 1262 LEKKLSGEFEMKNLGGLKYFLRIEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPVV 1321
LS F +K+ L YFL IE R G+ LSQR+YILDLLA M+ +P TP+
Sbjct: 1230 TLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMA 1289
Query: 1322 QGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVMR 1381
KL + + Y+ +VG L YLA TRPDI+Y V+ +SQFMH P+E+H+ A+ R
Sbjct: 1290 PSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKR 1349
Query: 1382 IIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKKQ 1392
I+RYL G P GI KK L + ++DADWAG D ST GY ++G + ++W SKKQ
Sbjct: 1350 ILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQ 1402
BLAST of IVF0019368 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 547.7 bits (1410), Expect = 3.7e-154
Identity = 409/1428 (28.64%), Postives = 651/1428 (45.59%), Query Frame = 0
Query: 62 NYGVWSQMVEVLLASKDKLGHINGERTQPASN---------DTGYKRWMSDNSMVKGWIL 121
NY +WS+ V L + G ++G P + + Y RW + ++ IL
Sbjct: 30 NYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDKLIYSAIL 89
Query: 122 SSLDPNLIGNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQTGTLEDYFYTL 181
++ ++ R +TA ++W++++ K+Y G + +
Sbjct: 90 GAISMSVQPAVSRATTAAQIWETLR-----------------KIYANPSYGHVTQLRFIT 149
Query: 182 QGLWKEIEFRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTV 241
+ F + + P+D D +V L L D + + +I P++
Sbjct: 150 R-------FDQLALLGKPMD--------HDEQVERVLENLPDDYKPVIDQIAAKDTPPSL 209
Query: 242 EETYGHVRREDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSVQEI 301
E + + ++ +S L+ + A +V V V H +TN T+ N NN
Sbjct: 210 TE---------IHERLINRESKLLALNSAEVVPITANV--VTHRNTN-TNRNQNNRGD-- 269
Query: 302 HCLCHRRYRERNPVLIKVLYTLQHDTTKLKQFSSAPTVAAKAIVKTPVLKSMDWYKELKK 361
+R Y N + S + K + + S+ + +
Sbjct: 270 ----NRNYNNNN--------NRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRC 329
Query: 362 KQAEAKRGKVSIAVSGKNGDDSPSEGIIFLSSNLSNDNSTWIVDSGASDHMTFTKTDLT- 421
Q + + S +P + L+ N + + W++DSGA+ H+T +L+
Sbjct: 330 PQLHQFQSTTNQQQS--TSPFTPWQPRANLAVNSPYNANNWLLDSGATHHITSDFNNLSF 389
Query: 422 AECVTKKTEILNANGISYPVKCAGSIKV---TSQLNLSNVLVVPSLATRLMSVSKLTKDR 481
+ T +++ A+G + P+ GS + + L+L+ VL VP++ L+SV +L
Sbjct: 390 HQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTN 449
Query: 482 NCVVKMYSDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEVQNKIWTWHR 541
V+ + F ++D+ T + +G +D LY + ++ +WH
Sbjct: 450 RVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHS-SWHS 509
Query: 542 RLGHPSLGYMKKLLPRLFKNNNLTVFN-------CDTCIKAKSHRVSYAPSSNKSNSPFD 601
RLGHPSL +L + N++L V N C C KSH+V ++ S+ S+ P +
Sbjct: 510 RLGHPSLA----ILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLE 569
Query: 602 LIHSDVWGPAPVSSIDGNKWFVLFIDDCTRMTWVYLLKSKDEVPSVFKKFYTMIKTQFGK 661
I+SDVW +P+ SID +++V+F+D TR TW+Y LK K +V F F ++++ +F
Sbjct: 570 YIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQT 629
Query: 662 GIKFFRSDNGGEFIGKVLKDFFVQMGIVHETSCVGTPQQNGVAERKNRHILEMSRALLFE 721
I SDNGGEF+ VL+D+ Q GI H TS TP+ NG++ERK+RHI+EM LL
Sbjct: 630 RIGTLYSDNGGEFV--VLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSH 689
Query: 722 YHVPTKFWDKSILMAVYVLNRLPTKINNFQTPLKTLEKHHSIPSVLSLTPKIFGCVAYVH 781
VP +W + +AVY++NRLPT + Q+P + L P+ L K+FGC Y
Sbjct: 690 ASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKL--FGQPPNYEKL--KVFGCACYPW 749
Query: 782 VPKTQRSKLSPCAVRCVFLGFGQNQKGYKCFDVDSRKWYVTMDVTFVEHEAFFKPT---I 841
+ R KL + +C F+G+ Q Y C + + + Y + V F E F T +
Sbjct: 750 LRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGV 809
Query: 842 QSDQGENSSESDVWKNKDLLSFQGWTL-----------------YGQDGVSGTDESDGN- 901
+ Q + S + W + L L + T S N
Sbjct: 810 STSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNL 869
Query: 902 -------GNGTDESDGDGNGATDGNKPLEMYSRNKNRAVFGMESENE-EVIQPNEEPQGP 961
+ ++ + NG +P + + N N + + N PN+ P
Sbjct: 870 PSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLP 929
Query: 962 MSPEDQLQVSLPTSKYTLPVRCNRG------IPPKRYEPDEDRHKKSKYPIANFVDTKSL 1021
SP + P++ + P + +PP P + + + T++
Sbjct: 930 QSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAK 989
Query: 1022 SG---PVKRFN--ENLLSCKIPENVDEAKSDPNWSQAMEAEMSALYNNKTWTLVELPQGK 1081
G P ++++ +L + P +A D W QAM +E++A N TW LV P
Sbjct: 990 DGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPS 1049
Query: 1082 IP-VGCRWVFSIKYNANGEIDRYKARLVAKGYTQ-------------------------- 1141
+ VGCRW+F+ K+N++G ++RYKARLVAKGY Q
Sbjct: 1050 VTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVA 1109
Query: 1142 -----------TQECFLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYGLKQSPRAWF 1201
FL G L +EVYM QPPG+ + VC+L KA+YGLKQ+PRAW+
Sbjct: 1110 VDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWY 1169
Query: 1202 GRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGE 1261
+ + GF SD +LF+ + + +++YVDD+++TGNDT + LS
Sbjct: 1170 VELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQR 1229
Query: 1262 FEMKNLGGLKYFLRIEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPVVQGVKLGEF 1321
F +K L YFL IE R QG+ LSQR+Y LDLLA ML +P TP+ KL
Sbjct: 1230 FSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLH 1289
Query: 1322 PDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVMRIIRYLKGC 1381
+ Y+ +VG L YLA TRPD++Y V+ +SQ+MH P++DH +A+ R++RYL G
Sbjct: 1290 SGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGT 1349
Query: 1382 PGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSA 1392
P GI KK L + ++DADWAG D ST GY ++G + ++W SKKQ V SS
Sbjct: 1350 PDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSST 1385
BLAST of IVF0019368 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 530.8 bits (1366), Expect = 4.7e-149
Identity = 368/1099 (33.48%), Postives = 552/1099 (50.23%), Query Frame = 0
Query: 367 SGKNGDDSPS-------EGIIFLSS-----NLSNDNSTWIVDSGASDHMTFTKTDLTAEC 426
SG+ DD+ + ++F++ +LS S W+VD+ AS H T + DL
Sbjct: 256 SGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVR-DLFCRY 315
Query: 427 VTKKTEILNANGISYPVKCAGSIKVTSQLNLSNVLV------VPSLATRLMSVSKLTKDR 486
V + SY K AG + + N+ LV VP L L+S L +D
Sbjct: 316 VAGDFGTVKMGNTSYS-KIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDG 375
Query: 487 NCVVKMYSDYFIIQD-ILTKE--IIGRGIERDGLYHLE-DLKAGRANLVVDQTEVQNKIW 546
Y YF Q LTK +I +G+ R LY ++ G N D+ V
Sbjct: 376 ------YESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGELNAAQDEISVD---- 435
Query: 547 TWHRRLGHPSLGYMKKLLPR--LFKNNNLTVFNCDTCIKAKSHRVSYAPSSNKSNSPFDL 606
WH+R+GH S ++ L + + TV CD C+ K HRVS+ SS + + DL
Sbjct: 436 LWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDL 495
Query: 607 IHSDVWGPAPVSSIDGNKWFVLFIDDCTRMTWVYLLKSKDEVPSVFKKFYTMIKTQFGKG 666
++SDV GP + S+ GNK+FV FIDD +R WVY+LK+KD+V VF+KF+ +++ + G+
Sbjct: 496 VYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRK 555
Query: 667 IKFFRSDNGGEFIGKVLKDFFVQMGIVHETSCVGTPQQNGVAERKNRHILEMSRALLFEY 726
+K RSDNGGE+ + +++ GI HE + GTPQ NGVAER NR I+E R++L
Sbjct: 556 LKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMA 615
Query: 727 HVPTKFWDKSILMAVYVLNRLPTKINNFQTPLKTLEKHHSIPSVLSLTPKIFGCVAYVHV 786
+P FW +++ A Y++NR P+ F+ P + S L K+FGC A+ HV
Sbjct: 616 KLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHL----KVFGCRAFAHV 675
Query: 787 PKTQRSKLSPCAVRCVFLGFGQNQKGYKCFDVDSRKWYVTMDVTFVEHEAFFKPTIQSDQ 846
PK QR+KL ++ C+F+G+G + GY+ +D +K + DV F E E
Sbjct: 676 PKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEV---------- 735
Query: 847 GENSSESDVWKNKDLLSFQGWTLYGQDGVSGTDESDGNGNGTDESDGDGNGATDGNKPLE 906
D S+ NG +
Sbjct: 736 --------------------------------------RTAADMSEKVKNGIIPNFVTIP 795
Query: 907 MYSRNKNRAVFGMESENEEVIQPNEEPQGPMSPEDQLQVSLPTSKYTLPVRCNRGIPPKR 966
S N A ES +EV + E+P + +QL + ++ P + P R
Sbjct: 796 STSNNPTSA----ESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEH--PTQGEEQHQPLR 855
Query: 967 YEPDEDRHKKSKYPIANFVDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQ---AM 1026
+ R + +YP +V + + PE++ E S P +Q AM
Sbjct: 856 -RSERPRVESRRYPSTEYV--------------LISDDREPESLKEVLSHPEKNQLMKAM 915
Query: 1027 EAEMSALYNNKTWTLVELPQGKIPVGCRWVFSIKYNANGEIDRYKARLVAKGYTQ----- 1086
+ EM +L N T+ LVELP+GK P+ C+WVF +K + + ++ RYKARLV KG+ Q
Sbjct: 916 QEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGID 975
Query: 1087 --------------------------------TQECFLHGELKEEVYMEQPPGYKSTNAK 1146
+ FLHG+L+EE+YMEQP G++ K
Sbjct: 976 FDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKK 1035
Query: 1147 PMVCKLNKALYGLKQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKR-NQEKLTALIIYVD 1206
MVCKLNK+LYGLKQ+PR W+ +F M+S + + SD ++ KR ++ L++YVD
Sbjct: 1036 HMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVD 1095
Query: 1207 DMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLRIEVMRSK--QGIVLSQRKYILDLL 1266
DM++ G D IA L+ LS F+MK+LG + L ++++R + + + LSQ KYI +L
Sbjct: 1096 DMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVL 1155
Query: 1267 AEIGMLDCRPADTPVVQGVKLGE--FPDQVPAN----KERYQRLVGKLIY-LAHTRPDIA 1326
M + +P TP+ +KL + P V K Y VG L+Y + TRPDIA
Sbjct: 1156 ERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIA 1215
Query: 1327 YGVSVVSQFMHNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSD 1386
+ V VVS+F+ NP ++H +AV I+RYL+G G + F + + + G+TDAD AG + +
Sbjct: 1216 HAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPI-LKGYTDADMAGDIDN 1266
Query: 1387 RRSTAGY-FTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAP 1391
R+S+ GY FTF GG ++W+SK Q VALS+ EAE+ + E++WL+R L ELG
Sbjct: 1276 RKSSTGYLFTFSGG-AISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQ 1266
BLAST of IVF0019368 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 382.9 bits (982), Expect = 1.6e-104
Identity = 347/1421 (24.42%), Postives = 624/1421 (43.91%), Query Frame = 0
Query: 58 FNGRNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDP 117
F+G Y +W + LLA +D L ++G P D W K I+ L
Sbjct: 11 FDGEKYAIWKFRIRALLAEQDVLKVVDG--LMPNEVDDS---WKKAERCAKSTIIEYLSD 70
Query: 118 NLIGNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQTG--TLEDYFYTLQGL 177
+ + TA+++ +++ + + +Q+ L ++ LK + +L +F+ L
Sbjct: 71 SFLNFATSDITARQILENLDAVYERKSLASQL-ALRKRLLSLKLSSEMSLLSHFHIFDEL 130
Query: 178 WKEIEFRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEE- 237
E+ + ++E+ K+ L L +DGI +T + T+ E
Sbjct: 131 ISEL-------------LAAGAKIEEMDKISHLLITLPSCYDGI------ITAIETLSEE 190
Query: 238 --TYGHVRREDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSVQEI 297
T V+ + Q + + + ++ M N+ N+NN+ +
Sbjct: 191 NLTLAFVKNRLLDQEIKIKNDHNDTSKKVM----------------NAIVHNNNNTYK-- 250
Query: 298 HCLCHRRYRERNPVLIKVLYTLQHDTTKLKQFSSAPTVAAKAIVKTPVLKSMDWYKELKK 357
+ ++ R K+ K S + + K YK +
Sbjct: 251 ----NNLFKNRVTKPKKI----------FKGNSKYKVKCHHCGREGHIKKDCFHYKRILN 310
Query: 358 KQAEAKRGKVSIAVSGKNGDDSPSEGIIFLSSNLSN----DNSTWIVDSGASDHMTFTK- 417
+ + +V A S GI F+ ++N DN +++DSGASDH+ +
Sbjct: 311 NKNKENEKQVQTAT---------SHGIAFMVKEVNNTSVMDNCGFVLDSGASDHLINDES 370
Query: 418 --TDLTAECVTKKTEILNANGISYPVKCAGSIKVTS--QLNLSNVLVVPSLATRLMSVSK 477
TD K + Y K G +++ + ++ L +VL A LMSV +
Sbjct: 371 LYTDSVEVVPPLKIAVAKQGEFIYATK-RGIVRLRNDHEITLEDVLFCKEAAGNLMSVKR 430
Query: 478 LTKDRNCVVKMYSDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEVQNKI 537
L + + S I ++ L ++ G+ L ++ + +N
Sbjct: 431 LQEAGMSIEFDKSGVTISKNGLMV------VKNSGM--LNNVPVINFQAYSINAKHKNNF 490
Query: 538 WTWHRRLGHPSLGYMKKLLPR-------LFKNNNLTVFNCDTCIKAKSHRVSYAPSSNKS 597
WH R GH S G + ++ + L N L+ C+ C+ K R+ + +K+
Sbjct: 491 RLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDKT 550
Query: 598 N--SPFDLIHSDVWGPAPVSSIDGNKWFVLFIDDCTRMTWVYLLKSKDEVPSVFKKFYTM 657
+ P ++HSDV GP ++D +FV+F+D T YL+K K +V S+F+ F
Sbjct: 551 HIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAK 610
Query: 658 IKTQFGKGIKFFRSDNGGEFIGKVLKDFFVQMGIVHETSCVGTPQQNGVAERKNRHILEM 717
+ F + + DNG E++ ++ F V+ GI + + TPQ NGV+ER R I E
Sbjct: 611 SEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEK 670
Query: 718 SRALLFEYHVPTKFWDKSILMAVYVLNRLPTK--INNFQTPLKTLEKHHSIPSVLSLTPK 777
+R ++ + FW +++L A Y++NR+P++ +++ +TP + H+ P + L +
Sbjct: 671 ARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMW--HNKKPYLKHL--R 730
Query: 778 IFGCVAYVHVPKTQRSKLSPCAVRCVFLGFGQNQKGYKCFDVDSRKWYVTMDVTFVE--- 837
+FG YVH+ K ++ K + + +F+G+ N G+K +D + K+ V DV E
Sbjct: 731 VFGATVYVHI-KNKQGKFDDKSFKSIFVGYEPN--GFKLWDAVNEKFIVARDVVVDETNM 790
Query: 838 ---HEAFFKPTIQSDQGENSSESDVWKNKDLLSFQGWTLYGQ-DGVSGTDESDGNGNGTD 897
F+ D E+ +++ ++ ++ + + D + +S + N
Sbjct: 791 VNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNF 850
Query: 898 ESDGD-------GNGATDGNKPLEMYSRNKNRAVFGMESENEEVIQPNEEPQGPMSPEDQ 957
+D N + + + + ++ F ES+ + E +G +P +
Sbjct: 851 PNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNES 910
Query: 958 LQVSLPTSKYTLPVRCNRGIPPKRYEPDEDRHK--KSKYPIANFVDTKSLSGPVKRFNEN 1017
+ T+++ + + E R + K+K I+ + SL+ V N +
Sbjct: 911 RESE--TAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVV--LNAH 970
Query: 1018 LLSCKIPENVDEAK---SDPNWSQAMEAEMSALYNNKTWTLVELPQGKIPVGCRWVFSIK 1077
+ +P + DE + +W +A+ E++A N TWT+ + P+ K V RWVFS+K
Sbjct: 971 TIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVK 1030
Query: 1078 YNANGEIDRYKARLVAKGYTQ-------------------------------------TQ 1137
YN G RYKARLVA+G+TQ +
Sbjct: 1031 YNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVK 1090
Query: 1138 ECFLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYGLKQSPRAWFGRFCRAMQSYGFK 1197
FL+G LKEE+YM P G + VCKLNKA+YGLKQ+ R WF F +A++ F
Sbjct: 1091 TAFLNGTLKEEIYMRLPQGISCNSDN--VCKLNKAIYGLKQAARCWFEVFEQALKECEFV 1150
Query: 1198 QCDSDHTLFL--KRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKY 1257
D +++ K N + +++YVDD+++ D + ++ L +F M +L +K+
Sbjct: 1151 NSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKH 1210
Query: 1258 FLRIEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPVVQGVKLGEFPDQVPANKERY 1317
F+ I + + I LSQ Y+ +L++ M +C TP+ + N
Sbjct: 1211 FIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTP-C 1270
Query: 1318 QRLVGKLIY-LAHTRPDIAYGVSVVSQFMHNPSEDHMDAVMRIIRYLKGCPGKGITFKKN 1377
+ L+G L+Y + TRPD+ V+++S++ + + + R++RYLKG + FKKN
Sbjct: 1271 RSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKN 1330
Query: 1378 GHLD--VSGFTDADWAGSVSDRRSTAGY-FTFVGGNLVTWRSKKQSVVALSSAEAEFRGV 1392
+ + G+ D+DWAGS DR+ST GY F NL+ W +K+Q+ VA SS EAE+ +
Sbjct: 1331 LAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMAL 1342
BLAST of IVF0019368 vs. ExPASy Swiss-Prot
Match:
P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)
HSP 1 Score: 185.7 bits (470), Expect = 3.7e-45
Identity = 95/228 (41.67%), Postives = 139/228 (60.96%), Query Frame = 0
Query: 1136 LIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLRIEVMRSKQGIVLSQRKYI 1195
L++YVDD+++TG+ + L +LS F MK+LG + YFL I++ G+ LSQ KY
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 1196 LDLLAEIGMLDCRPADTPVV----QGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDI 1255
+L GMLDC+P TP+ V ++PD P++ ++ +VG L YL TRPDI
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPD--PSD---FRSIVGALQYLTLTRPDI 122
Query: 1256 AYGVSVVSQFMHNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVS 1315
+Y V++V Q MH P+ D + R++RY+KG G+ KN L+V F D+DWAG S
Sbjct: 123 SYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTS 182
Query: 1316 DRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLW 1360
RRST G+ TF+G N+++W +K+Q V+ SS E E+R +A EL W
Sbjct: 183 TRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of IVF0019368 vs. ExPASy TrEMBL
Match:
A0A5A7T8G9 (Putative polyprotein (Retrotrasposon protein) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G00310 PE=4 SV=1)
HSP 1 Score: 2676.7 bits (6937), Expect = 0.0e+00
Identity = 1340/1437 (93.25%), Postives = 1349/1437 (93.88%), Query Frame = 0
Query: 1 MAEETNNRQLIVDGNTVSSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFNG 60
MAEETNNRQLIVDGNTVSSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFNG
Sbjct: 1 MAEETNNRQLIVDGNTVSSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFNG 60
Query: 61 RNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNLI 120
RNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNLI
Sbjct: 61 RNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNLI 120
Query: 121 GNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQTGTLEDYFYTLQGLWKEIE 180
GNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQTGTLEDYFYTLQGLWKEIE
Sbjct: 121 GNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQTGTLEDYFYTLQGLWKEIE 180
Query: 181 FRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGHVR 240
FRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGHVR
Sbjct: 181 FRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGHVR 240
Query: 241 REDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSV--QEIHCLCHR 300
REDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSV +
Sbjct: 241 REDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSVPGDPLSLSSQV 300
Query: 301 RYRERNPVLIKVLYTLQHDTTKLKQFSSAPTVAAKAIVKTPVLK---SMDWYKELKKKQA 360
+ +E + V +T +++ K + K K K DWYKELKKKQA
Sbjct: 301 QGKESSSNQGAVHFTTRYN--KTEAVLKCTHCGGKGHSKDTCFKIHGYPDWYKELKKKQA 360
Query: 361 EAKRGKVSIAVSGKNGDDSPSEGIIFLSSNLSNDNSTWIVDSGASDHMTFTKTDLTAECV 420
EAKRGKVSIAVSGKNGDDSPSEGIIFLSSNLSNDNSTWIVDSGASDHMTFTKTDLTAECV
Sbjct: 361 EAKRGKVSIAVSGKNGDDSPSEGIIFLSSNLSNDNSTWIVDSGASDHMTFTKTDLTAECV 420
Query: 421 TKKTEILNANGISYPVKCAGSIKVTSQLNLSNVLVVPSLATRLMSVSKLTKDRNCVVKMY 480
TKKTEILNANGISYPVKCAGSIKVTSQLNLSNVLVVPSLATRLMSVSKLTKDRNCVVKMY
Sbjct: 421 TKKTEILNANGISYPVKCAGSIKVTSQLNLSNVLVVPSLATRLMSVSKLTKDRNCVVKMY 480
Query: 481 SDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEVQNKIWTWHRRLGHPSL 540
SDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEVQNKIWTWHRRLGHPSL
Sbjct: 481 SDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEVQNKIWTWHRRLGHPSL 540
Query: 541 GYMKKLLPRLFKNNNLTVFNCDTCIKAKSHRVSYAPSSNKSNSPFDLIHSDVWGPAPVSS 600
GYMKKLLPRLFKNNNLTVFNCDTCIKAKSHRVSYAPSSNKSNSPFDLIHSDVWGPAPVSS
Sbjct: 541 GYMKKLLPRLFKNNNLTVFNCDTCIKAKSHRVSYAPSSNKSNSPFDLIHSDVWGPAPVSS 600
Query: 601 IDGNKWFVLFIDDCTRMTWVYLLKSKDEVPSVFKKFYTMIKTQFGKGIKFFRSDNGGEFI 660
IDGNKWFVLFIDDCTRMTWVYLLKSKDEVPSVFKKFYTMIKTQFGKGIKFFRSDNGGEFI
Sbjct: 601 IDGNKWFVLFIDDCTRMTWVYLLKSKDEVPSVFKKFYTMIKTQFGKGIKFFRSDNGGEFI 660
Query: 661 GKVLKDFFVQMGIVHETSCVGTPQQNGVAERKNRHILEMSRALLFEYHVPTKFWDKSILM 720
GKVLKDFFVQMGIVHETSCVGTPQQNGVAERKNRHILEMSRALLFEYHVPTKFWDKSILM
Sbjct: 661 GKVLKDFFVQMGIVHETSCVGTPQQNGVAERKNRHILEMSRALLFEYHVPTKFWDKSILM 720
Query: 721 AVYVLNRLPTKINNFQTPLKTLEKHHSIPSVLSLTPKIFGCVAYVHVPKTQRSKLSPCAV 780
AVYVLNRLPTKINNFQTPLKTLEKHHSIPSVLSLTPKIFGCVAYVHVPKTQRSKLSPCAV
Sbjct: 721 AVYVLNRLPTKINNFQTPLKTLEKHHSIPSVLSLTPKIFGCVAYVHVPKTQRSKLSPCAV 780
Query: 781 RCVFLGFGQNQKGYKCFDVDSRKWYVTMDVTFVEHEAFFKPTIQSDQGENSSESDVWKNK 840
RCVFLGFGQNQKGYKCFDVDSRKWYVTMDVTFVEHEAFFKPTIQSDQGENSSESDVWKNK
Sbjct: 781 RCVFLGFGQNQKGYKCFDVDSRKWYVTMDVTFVEHEAFFKPTIQSDQGENSSESDVWKNK 840
Query: 841 DLLSFQGWT----LYGQDGVSGTDESDGNGNGTDESDGDGNGATDGNKPLEMYSRNKNRA 900
DLLSFQGWT YGQDGVSGTDESDGNGNGTDESDGDGNGATDGNKPLEMYSRNKNRA
Sbjct: 841 DLLSFQGWTPGCEQYGQDGVSGTDESDGNGNGTDESDGDGNGATDGNKPLEMYSRNKNRA 900
Query: 901 VFGMESENEEVIQPNEEPQGPMSPEDQLQVSLPTSKYTLPVRCNRGIPPKRYEPDEDRHK 960
VFGMESENEEVIQPNEEPQGPMSPEDQLQVSLPTSKYTLPVRCNRGIPPKRYEPDEDRHK
Sbjct: 901 VFGMESENEEVIQPNEEPQGPMSPEDQLQVSLPTSKYTLPVRCNRGIPPKRYEPDEDRHK 960
Query: 961 KSKYPIANFVDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQAMEAEMSALYNNKT 1020
KSKYPIANFVDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQAMEAEMSALYNNKT
Sbjct: 961 KSKYPIANFVDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQAMEAEMSALYNNKT 1020
Query: 1021 WTLVELPQGKIPVGCRWVFSIKYNANGEIDRYKARLVAKGYTQTQ--------------- 1080
WTLVELPQGKIPVGCRWVFSIKYNANGEIDRYKARLVAKGYTQTQ
Sbjct: 1021 WTLVELPQGKIPVGCRWVFSIKYNANGEIDRYKARLVAKGYTQTQGIDFQETFSPVAKLN 1080
Query: 1081 ----------------------ECFLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYG 1140
FLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYG
Sbjct: 1081 TIRVLLSLAANLDWPLHQFDVKNAFLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYG 1140
Query: 1141 LKQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIA 1200
LKQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIA
Sbjct: 1141 LKQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIA 1200
Query: 1201 TLEKKLSGEFEMKNLGGLKYFLRIEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPV 1260
TLEKKLSGEFEMKNLGGLKYFLRIEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPV
Sbjct: 1201 TLEKKLSGEFEMKNLGGLKYFLRIEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPV 1260
Query: 1261 VQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVM 1320
VQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVM
Sbjct: 1261 VQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVM 1320
Query: 1321 RIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKK 1380
RIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKK
Sbjct: 1321 RIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKK 1380
Query: 1381 QSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNP 1392
QSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNP
Sbjct: 1381 QSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNP 1435
BLAST of IVF0019368 vs. ExPASy TrEMBL
Match:
A0A5D3CF38 (Putative polyprotein (Retrotrasposon protein) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G001130 PE=4 SV=1)
HSP 1 Score: 2666.0 bits (6909), Expect = 0.0e+00
Identity = 1335/1437 (92.90%), Postives = 1345/1437 (93.60%), Query Frame = 0
Query: 1 MAEETNNRQLIVDGNTVSSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFNG 60
MAEETNNRQLIVDGNTVSSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFNG
Sbjct: 1 MAEETNNRQLIVDGNTVSSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFNG 60
Query: 61 RNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNLI 120
RNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNLI
Sbjct: 61 RNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNLI 120
Query: 121 GNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQTGTLEDYFYTLQGLWKEIE 180
GNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQTGTLEDYFYTLQGLWKEIE
Sbjct: 121 GNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQTGTLEDYFYTLQGLWKEIE 180
Query: 181 FRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGHVR 240
FRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGHVR
Sbjct: 181 FRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGHVR 240
Query: 241 REDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSV--QEIHCLCHR 300
REDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSV +
Sbjct: 241 REDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSVPGDPLSLSSQV 300
Query: 301 RYRERNPVLIKVLYTLQHDTTKLKQFSSAPTVAAKAIVKTPVLK---SMDWYKELKKKQA 360
+ +E + V +T +++ K + K K K DWYKELKKKQA
Sbjct: 301 QGKESSSNQGAVHFTTRYN--KTEAVLKCTHCGGKGHSKDTCFKIHGYPDWYKELKKKQA 360
Query: 361 EAKRGKVSIAVSGKNGDDSPSEGIIFLSSNLSNDNSTWIVDSGASDHMTFTKTDLTAECV 420
EAKRGKVSIAVSGKNGDDSPSEG IFLSSNLSND STWIVDSGASDHMTFTKTDLTAECV
Sbjct: 361 EAKRGKVSIAVSGKNGDDSPSEGTIFLSSNLSNDYSTWIVDSGASDHMTFTKTDLTAECV 420
Query: 421 TKKTEILNANGISYPVKCAGSIKVTSQLNLSNVLVVPSLATRLMSVSKLTKDRNCVVKMY 480
TKKTEILNANGISYPVKCAGSIKVTSQLNLSNVLVVPSLATRLMSVSKLTKDRNCVVKMY
Sbjct: 421 TKKTEILNANGISYPVKCAGSIKVTSQLNLSNVLVVPSLATRLMSVSKLTKDRNCVVKMY 480
Query: 481 SDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEVQNKIWTWHRRLGHPSL 540
SDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEVQNKIWTWHRRLGHPSL
Sbjct: 481 SDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEVQNKIWTWHRRLGHPSL 540
Query: 541 GYMKKLLPRLFKNNNLTVFNCDTCIKAKSHRVSYAPSSNKSNSPFDLIHSDVWGPAPVSS 600
GYMKKLLPRLFKNNNLTVFNCDTCIKAKSHRVSYAPSSNKSNSPFDLIHSDVWGPAPVSS
Sbjct: 541 GYMKKLLPRLFKNNNLTVFNCDTCIKAKSHRVSYAPSSNKSNSPFDLIHSDVWGPAPVSS 600
Query: 601 IDGNKWFVLFIDDCTRMTWVYLLKSKDEVPSVFKKFYTMIKTQFGKGIKFFRSDNGGEFI 660
IDGNKWFVLFIDDCTRMTWVYLLKSKDEVPSVFKKFYTMIKTQFGKGIKFFRSDNGGEFI
Sbjct: 601 IDGNKWFVLFIDDCTRMTWVYLLKSKDEVPSVFKKFYTMIKTQFGKGIKFFRSDNGGEFI 660
Query: 661 GKVLKDFFVQMGIVHETSCVGTPQQNGVAERKNRHILEMSRALLFEYHVPTKFWDKSILM 720
GKVLKDFFVQMGIVHETSCVGTPQQNGVAERKNRHILEMSRALLFEYHVPTKFWDKSILM
Sbjct: 661 GKVLKDFFVQMGIVHETSCVGTPQQNGVAERKNRHILEMSRALLFEYHVPTKFWDKSILM 720
Query: 721 AVYVLNRLPTKINNFQTPLKTLEKHHSIPSVLSLTPKIFGCVAYVHVPKTQRSKLSPCAV 780
AVYVLNRLPTKINNFQTPLKTLEKHHSIPSVLSLTPKIFGCVAYVHVPKTQRSKLSPCAV
Sbjct: 721 AVYVLNRLPTKINNFQTPLKTLEKHHSIPSVLSLTPKIFGCVAYVHVPKTQRSKLSPCAV 780
Query: 781 RCVFLGFGQNQKGYKCFDVDSRKWYVTMDVTFVEHEAFFKPTIQSDQGENSSESDVWKNK 840
RCVFLGFGQNQKGYKCFDVDSRKWYVTMDVTFVEHEAFFKPTIQSDQGENSSESDVWKNK
Sbjct: 781 RCVFLGFGQNQKGYKCFDVDSRKWYVTMDVTFVEHEAFFKPTIQSDQGENSSESDVWKNK 840
Query: 841 DLLSFQGWT----LYGQDGVSGTDESDGNGNGTDESDGDGNGATDGNKPLEMYSRNKNRA 900
DLLSFQGWT YGQDGVSGTDESDGNGNGTDESDGDGNGATDGNKPLEMYSRNKNRA
Sbjct: 841 DLLSFQGWTPGCEQYGQDGVSGTDESDGNGNGTDESDGDGNGATDGNKPLEMYSRNKNRA 900
Query: 901 VFGMESENEEVIQPNEEPQGPMSPEDQLQVSLPTSKYTLPVRCNRGIPPKRYEPDEDRHK 960
VFGMESENEEVIQPNEEPQGPMSPEDQLQVSLPTSKYTLPVRCNRGIPPKRYEPDEDRHK
Sbjct: 901 VFGMESENEEVIQPNEEPQGPMSPEDQLQVSLPTSKYTLPVRCNRGIPPKRYEPDEDRHK 960
Query: 961 KSKYPIANFVDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQAMEAEMSALYNNKT 1020
KSKYPIANFVDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQAMEAEMSALYNNKT
Sbjct: 961 KSKYPIANFVDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQAMEAEMSALYNNKT 1020
Query: 1021 WTLVELPQGKIPVGCRWVFSIKYNANGEIDRYKARLVAKGYTQTQ--------------- 1080
WTLVELPQGKIPVGCRWVFSIKYNANGEIDRYKARLVAKGYTQTQ
Sbjct: 1021 WTLVELPQGKIPVGCRWVFSIKYNANGEIDRYKARLVAKGYTQTQGIDFQETFSPVAKLN 1080
Query: 1081 ----------------------ECFLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYG 1140
FLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYG
Sbjct: 1081 TIRVLLSLAANLDWPLHQFDVKNAFLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYG 1140
Query: 1141 LKQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIA 1200
LKQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIV GNDTQEIA
Sbjct: 1141 LKQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVMGNDTQEIA 1200
Query: 1201 TLEKKLSGEFEMKNLGGLKYFLRIEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPV 1260
TLEKKLSGEFEMKNLGGLKYFL IEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPV
Sbjct: 1201 TLEKKLSGEFEMKNLGGLKYFLGIEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPV 1260
Query: 1261 VQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVM 1320
VQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVM
Sbjct: 1261 VQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVM 1320
Query: 1321 RIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKK 1380
RI+RYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKK
Sbjct: 1321 RILRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKK 1380
Query: 1381 QSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNP 1392
QSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNP
Sbjct: 1381 QSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNP 1435
BLAST of IVF0019368 vs. ExPASy TrEMBL
Match:
A0A5D3BHP1 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00280 PE=4 SV=1)
HSP 1 Score: 2109.0 bits (5463), Expect = 0.0e+00
Identity = 1111/1437 (77.31%), Postives = 1122/1437 (78.08%), Query Frame = 0
Query: 1 MAEETNNRQLIVDGNTVSSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFNG 60
MAEETNNRQLIVDGNTVSSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFNG
Sbjct: 1 MAEETNNRQLIVDGNTVSSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFNG 60
Query: 61 RNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNLI 120
RNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNLI
Sbjct: 61 RNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNLI 120
Query: 121 GNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQTGTLEDYFYTLQGLWKEIE 180
GNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQTGTLEDYFYTLQGLWKEIE
Sbjct: 121 GNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQTGTLEDYFYTLQGLWKEIE 180
Query: 181 FRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGHVR 240
FRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGHVR
Sbjct: 181 FRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGHVR 240
Query: 241 REDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSV--QEIHCLCHR 300
REDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSV +
Sbjct: 241 REDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSVPGDPLSLSSQV 300
Query: 301 RYRERNPVLIKVLYTLQHDTTKLKQFSSAPTVAAKAIVKTPVLK---SMDWYKELKKKQA 360
+ +E + V +T +++ K + K K K DWYKELKKKQA
Sbjct: 301 QGKESSSNQGAVHFTTRYN--KTEAVLKCTHCGGKGHSKDTCFKIHGYPDWYKELKKKQA 360
Query: 361 EAKRGKVSIAVSGKNGDDSPSEGIIFLSSNLSNDNSTWIVDSGASDHMTFTKTDLTAECV 420
EAKRGKVSIAVSGKNGDDSPSEG IFLSSNLSND STWIVDSGASDHMTFTKTDLTAECV
Sbjct: 361 EAKRGKVSIAVSGKNGDDSPSEGTIFLSSNLSNDYSTWIVDSGASDHMTFTKTDLTAECV 420
Query: 421 TKKTEILNANGISYPVKCAGSIKVTSQLNLSNVLVVPSLATRLMSVSKLTKDRNCVVKMY 480
TKKTEILNANGISYPVKCAGSIKVTSQLNLSNVLVVPSLATRLMSVSKLTKDRNCVVKMY
Sbjct: 421 TKKTEILNANGISYPVKCAGSIKVTSQLNLSNVLVVPSLATRLMSVSKLTKDRNCVVKMY 480
Query: 481 SDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEVQNKIWTWHRRLGHPSL 540
SDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEVQNKIWTWHRRLGHPSL
Sbjct: 481 SDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEVQNKIWTWHRRLGHPSL 540
Query: 541 GYMKKLLPRLFKNNNLTVFNCDTCIKAKSHRVSYAPSSNKSNSPFDLIHSDVWGPAPVSS 600
GYMKKLLPRLFKNNNLTVFNCDTCIKAKSHRVSYAPSSNKSNSPFDLIHSDVWGPAP
Sbjct: 541 GYMKKLLPRLFKNNNLTVFNCDTCIKAKSHRVSYAPSSNKSNSPFDLIHSDVWGPAP--- 600
Query: 601 IDGNKWFVLFIDDCTRMTWVYLLKSKDEVPSVFKKFYTMIKTQFGKGIKFFRSDNGGEFI 660
Sbjct: 601 ------------------------------------------------------------ 660
Query: 661 GKVLKDFFVQMGIVHETSCVGTPQQNGVAERKNRHILEMSRALLFEYHVPTKFWDKSILM 720
Sbjct: 661 ------------------------------------------------------------ 720
Query: 721 AVYVLNRLPTKINNFQTPLKTLEKHHSIPSVLSLTPKIFGCVAYVHVPKTQRSKLSPCAV 780
Sbjct: 721 ------------------------------------------------------------ 780
Query: 781 RCVFLGFGQNQKGYKCFDVDSRKWYVTMDVTFVEHEAFFKPTIQSDQGENSSESDVWKNK 840
NQKGYKCFDVDSRKWYVTMDVTF+EHEAFFKPTIQSDQGENSSESDVWKNK
Sbjct: 781 ---------NQKGYKCFDVDSRKWYVTMDVTFMEHEAFFKPTIQSDQGENSSESDVWKNK 840
Query: 841 DLLSFQGWT----LYGQDGVSGTDESDGNGNGTDESDGDGNGATDGNKPLEMYSRNKNRA 900
DLLSFQGWT YGQDGVSGTDESDGNGNGTDESDGDGNGATDGNKPLEMYSRNKNRA
Sbjct: 841 DLLSFQGWTPGCEQYGQDGVSGTDESDGNGNGTDESDGDGNGATDGNKPLEMYSRNKNRA 900
Query: 901 VFGMESENEEVIQPNEEPQGPMSPEDQLQVSLPTSKYTLPVRCNRGIPPKRYEPDEDRHK 960
VFGMESENEEVIQPNEEPQGPMSPEDQLQVSLPTSKYTLPVRCNRGIPPKRYEPDEDRHK
Sbjct: 901 VFGMESENEEVIQPNEEPQGPMSPEDQLQVSLPTSKYTLPVRCNRGIPPKRYEPDEDRHK 960
Query: 961 KSKYPIANFVDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQAMEAEMSALYNNKT 1020
KSKYPIANFVDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQAMEAEMSALYNNKT
Sbjct: 961 KSKYPIANFVDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQAMEAEMSALYNNKT 1020
Query: 1021 WTLVELPQGKIPVGCRWVFSIKYNANGEIDRYKARLVAKGYTQTQ--------------- 1080
WTLVELPQGKIPVGCRWVFSIKYNANGEIDRYKARLVAKGYTQTQ
Sbjct: 1021 WTLVELPQGKIPVGCRWVFSIKYNANGEIDRYKARLVAKGYTQTQGIDFQETFSPVAKLN 1080
Query: 1081 ----------------------ECFLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYG 1140
FLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYG
Sbjct: 1081 TIRVLLSLAANLDWPLHQFDVKNAFLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYG 1140
Query: 1141 LKQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIA 1200
LKQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIV GNDTQEIA
Sbjct: 1141 LKQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVMGNDTQEIA 1200
Query: 1201 TLEKKLSGEFEMKNLGGLKYFLRIEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPV 1260
TLEKKLSGEFEMKNLGGLKYFL IEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPV
Sbjct: 1201 TLEKKLSGEFEMKNLGGLKYFLGIEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPV 1212
Query: 1261 VQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVM 1320
VQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVM
Sbjct: 1261 VQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVM 1212
Query: 1321 RIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKK 1380
RI+RYLKGCPGK GYFTFVGGNLVTWRSKK
Sbjct: 1321 RILRYLKGCPGK-------------------------------GYFTFVGGNLVTWRSKK 1212
Query: 1381 QSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNP 1392
QSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNP
Sbjct: 1381 QSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNP 1212
BLAST of IVF0019368 vs. ExPASy TrEMBL
Match:
A0A2N9IDK7 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29099 PE=4 SV=1)
HSP 1 Score: 1426.0 bits (3690), Expect = 0.0e+00
Identity = 742/1466 (50.61%), Postives = 971/1466 (66.23%), Query Frame = 0
Query: 1 MAEETNNRQLIVDGNTVSSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFNG 60
MAE T+ Q + N + + LT K+T+ + R+ P P + P+ I +G
Sbjct: 1 MAESTDLMQQL---NPQTESLLTSLTTKMTEVLTRSQTSPHPPPA--DSSTAPIGIKLDG 60
Query: 61 RNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNLI 120
NY +WSQ+VE+ ++ KDKLG+ING+ QP D ++RW ++N++VKGW+++S+D +LI
Sbjct: 61 SNYALWSQVVEMYISGKDKLGYINGDSPQPPETDPSFRRWRTENAIVKGWLINSMDSSLI 120
Query: 121 GNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQT-GTLEDYFYTLQGLWKEI 180
NFIRF TAK+VWDS T+FDG D +Q+YDL +V KQ G++E Y+ LQGLW+EI
Sbjct: 121 ANFIRFPTAKQVWDSAATTYFDGTDTSQVYDLRRRVTRTKQAGGSIEKYYNDLQGLWREI 180
Query: 181 EFRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGHV 240
+FR+PNPM C DI+KYN + Q+ +VYIFL GL+DR D R+++L++ P PTVE+ Y HV
Sbjct: 181 DFRRPNPMECANDIQKYNSILQEDRVYIFLDGLDDRLDKTRSDVLQLKPFPTVEQAYAHV 240
Query: 241 RREDVRQSVMVGKSTDLSNSVAMIVQGAK-------QVAGVPHISTNSTHGNSNNSVQEI 300
RREDVRQ VM + + V M +G K GV +S+ ++ S +
Sbjct: 241 RREDVRQMVMT-SGANTAPGVVMASKGIKAGHYHTPPKTGVLSLSSGKSNPPSKSKAPSD 300
Query: 301 HCLCHRRYRERNPVLIKVLYTLQHDTTKLKQFSSAPTVAAKAIVKTPVLKSMDWYKELK- 360
C +H + P DW+ +L+
Sbjct: 301 GMKCTH------------CGNAKHTRETCFKLHGYP----------------DWWHDLQA 360
Query: 361 KKQAEA-----KRGKVSIA--------VSGKNGDDSPSEGIIFLSSNLSNDNSTWIVDSG 420
+K+ EA G+V++ S +P L S+ ND+ WI+DSG
Sbjct: 361 RKKHEAPVIDDSTGRVAMVTGEPSLSLTSQVESSHNPGNCSNALHSSTHNDDDNWILDSG 420
Query: 421 ASDHMTFTKTDLTAECVTKKTEILNANGISYPVKCAGSIKVTSQLNLSNVLVVPSLATRL 480
A+DHMTF D + +++ + NANG++YPV AG + ++ L+LS+ L+VPSL+ +L
Sbjct: 421 ATDHMTFDSNDFSHITPPRRSHVANANGVTYPVTGAGIVTLSPSLSLSHTLLVPSLSNKL 480
Query: 481 MSVSKLTKDRNCVVKMYSDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTE 540
MSVS++T D NCVV MYS + ++QDILTKEIIGRG +R GLY+++D RAN +
Sbjct: 481 MSVSQVTADLNCVVLMYSTFCLLQDILTKEIIGRGTKRGGLYYVDDFSPSRANHM--HHT 540
Query: 541 VQNK---IWTWHRRLGHPSLGYMKKLLPRLFKNNNLTVFNCDTCIKAKSHRVSYAPSSNK 600
V NK IW WH RLGHPS GY+K L P LF N + F C+TCI AKSHRVSY S NK
Sbjct: 541 VNNKERQIWLWHHRLGHPSFGYLKHLFPDLFSNTMHSNFKCNTCILAKSHRVSYPVSMNK 600
Query: 601 SNSPFDLIHSDVWGPAPVSSIDGNKWFVLFIDDCTRMTWVYLLKSKDEVPSVFKKFYTMI 660
S PF LIHSDVWGP+PV++ G++WFV+F+DDCTRMTW+YLLK KDEV VFK F+ M+
Sbjct: 601 SAIPFALIHSDVWGPSPVTTSSGHRWFVIFVDDCTRMTWLYLLKHKDEVFDVFKSFHIMV 660
Query: 661 KTQFGKGIKFFRSDNGGEFIGKVLKDFFVQMGIVHETSCVGTPQQNGVAERKNRHILEMS 720
+TQF I+ RSDNGGE++ + + +F G+ HETSC TPQQNG+AERKNRHILE +
Sbjct: 661 QTQFSAKIQILRSDNGGEYVNQPFQAYFQSHGLFHETSCSQTPQQNGIAERKNRHILETA 720
Query: 721 RALLFEYHVPTKFWDKSILMAVYVLNRLPTKINNFQTPLKTLEKHHSIPSVLSLTPKIFG 780
RALL HVP+++WD ++ AV++LNR+PTK+ FQTPLK L H +P+VL + P+IFG
Sbjct: 721 RALLIGAHVPSRYWDDAVATAVHLLNRMPTKVLTFQTPLKVLSNHVPLPTVLMIPPRIFG 780
Query: 781 CVAYVHVPKTQRSKLSPCAVRCVFLGFGQNQKGYKCFDVDSRKWYVTMDVTFVEHEAFF- 840
CVA+VH+ K QR+KL PCAVRC+FLG+G ++KGY+CFD +++ Y+TMDVTF+E + FF
Sbjct: 781 CVAFVHLHKNQRTKLDPCAVRCLFLGYGLHKKGYRCFDPTTKRTYITMDVTFLESDTFFP 840
Query: 841 KPTIQSD-QGENSSESDVWKNKDLLSFQGWTLYGQDGVSGTDESDGNGNGTDESDGDGNG 900
P S QGE E W +G + + D +G D + D
Sbjct: 841 SPASNSTLQGELRDEEQNW-------------WGSEELHVEDNPAHMNDGNDMIEPDVQT 900
Query: 901 ATDGNKPLEMYSRNKNRAVFGMESENEEVIQPNEEPQGPMSPEDQLQVSLPTSK------ 960
++MY R + ++ ESE+E +P P S E+ +VS PT+
Sbjct: 901 FVG----VDMYPRAEPVSLANAESEDESPHSSVPDPNDPPS-ENIPEVSSPTTPLHTNAM 960
Query: 961 -----YTLPVRCNRGIPPKRYEPDEDRHKKSKYPIANFVDTKSLSGPVKRFNENLLSCKI 1020
Y LP R NRG PP RY PD + ++SKYPIAN+V T+ LS P+K F L SC I
Sbjct: 961 DTSTGYVLPFRHNRGKPPNRYSPDIE-ERRSKYPIANYVSTQRLSEPLKAFAHTLSSCNI 1020
Query: 1021 PENVDEAKSDPNWSQAMEAEMSALYNNKTWTLVELPQGKIPVGCRWVFSIKYNANGEIDR 1080
P +V+EA SDP W+QA++ E+ AL NKTW LV LP+GK VGC+W+FSIKY A+G IDR
Sbjct: 1021 PSSVEEALSDPKWAQAIKEELEALQKNKTWALVVLPEGKKTVGCKWIFSIKYKADGSIDR 1080
Query: 1081 YKARLVAKGYTQT-------------------------------------QECFLHGELK 1140
KARLVAKGYTQT + FLHG+L+
Sbjct: 1081 CKARLVAKGYTQTYGIDYHETFSPVAKLNTVRVLLSLAANLDWPLHQLDVKNAFLHGDLE 1140
Query: 1141 EEVYMEQPPGYKSTNAKPMVCKLNKALYGLKQSPRAWFGRFCRAMQSYGFKQCDSDHTLF 1200
EEVYM+ PPGY +++ + CKL +ALYGLKQSPRAWFGRF AM+ YGF+Q +SDHTLF
Sbjct: 1141 EEVYMDIPPGYTASSKAKIACKLQRALYGLKQSPRAWFGRFSSAMRKYGFQQSNSDHTLF 1200
Query: 1201 LKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLRIEVMRSKQ 1260
LK K+TALI+YVDDMI+TG+D +EI+ L+++LS EFEMKNLGGLKYFL IEV RS+Q
Sbjct: 1201 LKHRLGKVTALIVYVDDMIITGDDAEEISRLQEQLSTEFEMKNLGGLKYFLGIEVARSRQ 1260
Query: 1261 GIVLSQRKYILDLLAEIGMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLA 1320
GI LSQRKY+LDLL+E+G+L+C+PADTP+V KLGE+ DQVPA+KERYQRLVGKLIYL+
Sbjct: 1261 GIFLSQRKYVLDLLSEVGLLECKPADTPIVPNHKLGEYTDQVPADKERYQRLVGKLIYLS 1320
Query: 1321 HTRPDIAYGVSVVSQFMHNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDAD 1380
HTRPDIAY VSVVSQFMH PSEDHMDAV+RI+RYLK PGKG+ F KN HL+V G+TDAD
Sbjct: 1321 HTRPDIAYAVSVVSQFMHCPSEDHMDAVIRILRYLKSSPGKGLMFSKNNHLNVDGYTDAD 1380
Query: 1381 WAGSVSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLG 1392
WAG++SDR+ST+GYFTFVGGNLVTWRSKKQ VVALSSAEAEFRG+AKG+CELLWLRRLL
Sbjct: 1381 WAGNISDRKSTSGYFTFVGGNLVTWRSKKQKVVALSSAEAEFRGMAKGLCELLWLRRLLA 1411
BLAST of IVF0019368 vs. ExPASy TrEMBL
Match:
A0A2N9G4T4 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22073 PE=4 SV=1)
HSP 1 Score: 1425.6 bits (3689), Expect = 0.0e+00
Identity = 735/1424 (51.62%), Postives = 960/1424 (67.42%), Query Frame = 0
Query: 1 MAEETNNRQLIVDGNTVSSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFNG 60
MAE T+ Q + N + + LT K+T+ + R+ P P + P+ I +G
Sbjct: 1 MAESTDLMQQL---NPQTESLLTSLTTKMTEVLTRSQTSPHPPPA--DSSTAPIGIKLDG 60
Query: 61 RNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNLI 120
NY +WSQ+VE+ ++ KDKLG+ING+ QP D ++RW ++N++VKGW+++S+D +LI
Sbjct: 61 SNYALWSQVVEMYISGKDKLGYINGDSPQPPETDPSFRRWRTENAIVKGWLINSMDSSLI 120
Query: 121 GNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQT-GTLEDYFYTLQGLWKEI 180
NFIRF TAK+VWDS T+FDG D +Q+YDL +V KQ G++E Y+ LQGLW+EI
Sbjct: 121 ANFIRFPTAKQVWDSAATTYFDGTDTSQVYDLRRRVTRTKQAGGSIEKYYNDLQGLWREI 180
Query: 181 EFRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGHV 240
+FR+PNPM C DI+KYN + Q+ +VYIFL GL+DR D R+++L++ P PTVE+ Y HV
Sbjct: 181 DFRRPNPMECASDIQKYNSILQEDRVYIFLDGLDDRLDKTRSDVLQLKPFPTVEQAYAHV 240
Query: 241 RREDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGV-PHISTNSTHGNSNNSVQEIHCLCHR 300
RREDVRQ VM GA GV P TH + +E C
Sbjct: 241 RREDVRQMVM--------------TSGANTAPGVAPSDGMKCTHCGNAKHTRET-CFKLH 300
Query: 301 RYRERNPVLIKVLYTLQHDTTKLKQFSSAPTVAAKAIVKTPVLKSMDWYKELKKKQAEAK 360
Y + HD K+ + PV+ +
Sbjct: 301 GYPD-----------WWHDLQARKKH------------EAPVIDD-------STGRVAMV 360
Query: 361 RGKVSIAVSGK-NGDDSPSEGIIFLSSNLSNDNSTWIVDSGASDHMTFTKTDLTAECVTK 420
G+ S++++ + +P L S+ ND+ WI+DSGA+DHMTF D + +
Sbjct: 361 TGEPSLSLTSQVESSHNPGNCSNALHSSTHNDDDNWILDSGATDHMTFDSNDFSHITPPR 420
Query: 421 KTEILNANGISYPVKCAGSIKVTSQLNLSNVLVVPSLATRLMSVSKLTKDRNCVVKMYSD 480
++ + NANG++YPV AG + ++ L+LS+ L+VPSL+ +LMSVS++T D NCVV MYS
Sbjct: 421 RSHVANANGVTYPVTGAGIVTLSPSLSLSHTLLVPSLSNKLMSVSQVTADLNCVVLMYST 480
Query: 481 YFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEVQNK---IWTWHRRLGHPS 540
+ ++QDILTKEIIGRG +R GLY+++D RAN + V NK IW WH RLGHPS
Sbjct: 481 FCLLQDILTKEIIGRGTKRGGLYYVDDFSPSRANHM--HHTVNNKERQIWLWHHRLGHPS 540
Query: 541 LGYMKKLLPRLFKNNNLTVFNCDTCIKAKSHRVSYAPSSNKSNSPFDLIHSDVWGPAPVS 600
GY+K L P LF N + F C+TCI AKSHRVSY S NKS PF LIHSDVWGP+P++
Sbjct: 541 FGYLKHLFPDLFSNTMHSNFKCNTCILAKSHRVSYPVSMNKSAIPFALIHSDVWGPSPIT 600
Query: 601 SIDGNKWFVLFIDDCTRMTWVYLLKSKDEVPSVFKKFYTMIKTQFGKGIKFFRSDNGGEF 660
+ G++WFV+F+DDCTRMTW+YLLK KDEV VFK F+ M++TQF I+ RSDNGGE+
Sbjct: 601 TSSGHRWFVIFVDDCTRMTWLYLLKHKDEVFDVFKSFHIMVQTQFSAKIQILRSDNGGEY 660
Query: 661 IGKVLKDFFVQMGIVHETSCVGTPQQNGVAERKNRHILEMSRALLFEYHVPTKFWDKSIL 720
+ + + +F G+ HETSC TPQQNG+AERKNRHILE +RALL HVP+++WD ++
Sbjct: 661 VNQPFQAYFQSHGLFHETSCSQTPQQNGIAERKNRHILETARALLIGAHVPSRYWDDAVA 720
Query: 721 MAVYVLNRLPTKINNFQTPLKTLEKHHSIPSVLSLTPKIFGCVAYVHVPKTQRSKLSPCA 780
AV++LNR+PTK+ FQTPLK L H +P+VL + P+IFGCVA+VH+ K QR+KL PCA
Sbjct: 721 TAVHLLNRMPTKVLTFQTPLKVLSNHVPLPTVLMIPPRIFGCVAFVHLHKNQRTKLDPCA 780
Query: 781 VRCVFLGFGQNQKGYKCFDVDSRKWYVTMDVTFVEHEAFF-KPTIQSD-QGENSSESDVW 840
VRC+FLG+G ++KGY+CFD +++ Y+TMDVTF+E + FF P S QGE E W
Sbjct: 781 VRCLFLGYGLHKKGYRCFDPTTKRTYITMDVTFLESDTFFPSPASNSTLQGELRDEEQNW 840
Query: 841 KNKDLLSFQGWTLYGQDGVSGTDESDGNGNGTDESDGDGNGATDGNKPLEMYSRNKNRAV 900
+G + + D +G D + D ++MY R + ++
Sbjct: 841 -------------WGSEELHVEDNPAHMNDGNDMIEPDVQTFVG----VDMYPRAEPVSL 900
Query: 901 FGMESENEEVIQPNEEPQGPMSPEDQLQVSLPTSK-----------YTLPVRCNRGIPPK 960
ESE+E +P P S E+ +VS PT+ Y LP R NRG PP
Sbjct: 901 ANAESEDESPHSSVPDPNDPPS-ENIPEVSSPTTPLHTNAMDTSTGYVLPFRHNRGKPPN 960
Query: 961 RYEPDEDRHKKSKYPIANFVDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQAMEA 1020
RY PD + ++SKYPIAN+V T+ LS P+K F L SC IP +V+EA SDP W+QA++
Sbjct: 961 RYSPDIE-ERRSKYPIANYVSTQRLSEPLKAFAHTLSSCNIPSSVEEALSDPKWAQAIKE 1020
Query: 1021 EMSALYNNKTWTLVELPQGKIPVGCRWVFSIKYNANGEIDRYKARLVAKG---------- 1080
E+ AL NKTW LV LP+GK VGC+W+FSIKY A+G IDRYKARLVAKG
Sbjct: 1021 ELEALQKNKTWALVVLPEGKKTVGCKWIFSIKYKADGSIDRYKARLVAKGVLLSLAANLD 1080
Query: 1081 ----YTQTQECFLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYGLKQSPRAWFGRFC 1140
+ FLHG+L+EEVYM+ PPGY +++ + CKL +ALYGLKQSPRAWFGRF
Sbjct: 1081 WPLHQLDVKNAFLHGDLEEEVYMDIPPGYTASSKAKIACKLQRALYGLKQSPRAWFGRFS 1140
Query: 1141 RAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMK 1200
AM+ YGF+Q +SDHTLFLK K+TALI+YVDDMI+TG+D +EI+ L+++LS EFEMK
Sbjct: 1141 SAMRKYGFQQSNSDHTLFLKHRLGKVTALIVYVDDMIITGDDAEEISRLQEQLSTEFEMK 1200
Query: 1201 NLGGLKYFLRIEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPVVQGVKLGEFPDQV 1260
NLGGLKYFL IEV RS+QGI LSQRKY+LDLL+E+G+L+C+PADTP+V KLGE+ DQV
Sbjct: 1201 NLGGLKYFLGIEVARSRQGIFLSQRKYVLDLLSEVGLLECKPADTPIVPNHKLGEYTDQV 1260
Query: 1261 PANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVMRIIRYLKGCPGKG 1320
PA+KERYQRLVGKLIYL+HTRPDIAY VSVVSQFMH PSEDHMDAV+RI+RYLK PGKG
Sbjct: 1261 PADKERYQRLVGKLIYLSHTRPDIAYAVSVVSQFMHCPSEDHMDAVIRILRYLKSSPGKG 1320
Query: 1321 ITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEF 1380
+ F KN HL+V G+TDADWAG++SDR+ST+GYFTFVGGNLVTWRSKKQ VVALSSAEAEF
Sbjct: 1321 LMFSKNNHLNVDGYTDADWAGNISDRKSTSGYFTFVGGNLVTWRSKKQKVVALSSAEAEF 1353
Query: 1381 RGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNP 1392
RG+AKG+CELLWLRRLL E+GFAP+ M+L+CD++ AIDISHNP
Sbjct: 1381 RGMAKGLCELLWLRRLLAEIGFAPSSEMNLFCDNKAAIDISHNP 1353
BLAST of IVF0019368 vs. NCBI nr
Match:
KAA0037867.1 (putative polyprotein (retrotrasposon protein) [Cucumis melo var. makuwa])
HSP 1 Score: 2664 bits (6905), Expect = 0.0
Identity = 1340/1437 (93.25%), Postives = 1349/1437 (93.88%), Query Frame = 0
Query: 1 MAEETNNRQLIVDGNTVSSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFNG 60
MAEETNNRQLIVDGNTVSSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFNG
Sbjct: 1 MAEETNNRQLIVDGNTVSSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFNG 60
Query: 61 RNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNLI 120
RNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNLI
Sbjct: 61 RNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNLI 120
Query: 121 GNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQTGTLEDYFYTLQGLWKEIE 180
GNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQTGTLEDYFYTLQGLWKEIE
Sbjct: 121 GNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQTGTLEDYFYTLQGLWKEIE 180
Query: 181 FRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGHVR 240
FRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGHVR
Sbjct: 181 FRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGHVR 240
Query: 241 REDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSV--QEIHCLCHR 300
REDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSV +
Sbjct: 241 REDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSVPGDPLSLSSQV 300
Query: 301 RYRERNPVLIKVLYTLQHDTTKLKQFSSAPTVAAKAIVKTPVLKSM---DWYKELKKKQA 360
+ +E + V +T +++ T+ K K K DWYKELKKKQA
Sbjct: 301 QGKESSSNQGAVHFTTRYNKTEA--VLKCTHCGGKGHSKDTCFKIHGYPDWYKELKKKQA 360
Query: 361 EAKRGKVSIAVSGKNGDDSPSEGIIFLSSNLSNDNSTWIVDSGASDHMTFTKTDLTAECV 420
EAKRGKVSIAVSGKNGDDSPSEGIIFLSSNLSNDNSTWIVDSGASDHMTFTKTDLTAECV
Sbjct: 361 EAKRGKVSIAVSGKNGDDSPSEGIIFLSSNLSNDNSTWIVDSGASDHMTFTKTDLTAECV 420
Query: 421 TKKTEILNANGISYPVKCAGSIKVTSQLNLSNVLVVPSLATRLMSVSKLTKDRNCVVKMY 480
TKKTEILNANGISYPVKCAGSIKVTSQLNLSNVLVVPSLATRLMSVSKLTKDRNCVVKMY
Sbjct: 421 TKKTEILNANGISYPVKCAGSIKVTSQLNLSNVLVVPSLATRLMSVSKLTKDRNCVVKMY 480
Query: 481 SDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEVQNKIWTWHRRLGHPSL 540
SDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEVQNKIWTWHRRLGHPSL
Sbjct: 481 SDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEVQNKIWTWHRRLGHPSL 540
Query: 541 GYMKKLLPRLFKNNNLTVFNCDTCIKAKSHRVSYAPSSNKSNSPFDLIHSDVWGPAPVSS 600
GYMKKLLPRLFKNNNLTVFNCDTCIKAKSHRVSYAPSSNKSNSPFDLIHSDVWGPAPVSS
Sbjct: 541 GYMKKLLPRLFKNNNLTVFNCDTCIKAKSHRVSYAPSSNKSNSPFDLIHSDVWGPAPVSS 600
Query: 601 IDGNKWFVLFIDDCTRMTWVYLLKSKDEVPSVFKKFYTMIKTQFGKGIKFFRSDNGGEFI 660
IDGNKWFVLFIDDCTRMTWVYLLKSKDEVPSVFKKFYTMIKTQFGKGIKFFRSDNGGEFI
Sbjct: 601 IDGNKWFVLFIDDCTRMTWVYLLKSKDEVPSVFKKFYTMIKTQFGKGIKFFRSDNGGEFI 660
Query: 661 GKVLKDFFVQMGIVHETSCVGTPQQNGVAERKNRHILEMSRALLFEYHVPTKFWDKSILM 720
GKVLKDFFVQMGIVHETSCVGTPQQNGVAERKNRHILEMSRALLFEYHVPTKFWDKSILM
Sbjct: 661 GKVLKDFFVQMGIVHETSCVGTPQQNGVAERKNRHILEMSRALLFEYHVPTKFWDKSILM 720
Query: 721 AVYVLNRLPTKINNFQTPLKTLEKHHSIPSVLSLTPKIFGCVAYVHVPKTQRSKLSPCAV 780
AVYVLNRLPTKINNFQTPLKTLEKHHSIPSVLSLTPKIFGCVAYVHVPKTQRSKLSPCAV
Sbjct: 721 AVYVLNRLPTKINNFQTPLKTLEKHHSIPSVLSLTPKIFGCVAYVHVPKTQRSKLSPCAV 780
Query: 781 RCVFLGFGQNQKGYKCFDVDSRKWYVTMDVTFVEHEAFFKPTIQSDQGENSSESDVWKNK 840
RCVFLGFGQNQKGYKCFDVDSRKWYVTMDVTFVEHEAFFKPTIQSDQGENSSESDVWKNK
Sbjct: 781 RCVFLGFGQNQKGYKCFDVDSRKWYVTMDVTFVEHEAFFKPTIQSDQGENSSESDVWKNK 840
Query: 841 DLLSFQGWT----LYGQDGVSGTDESDGNGNGTDESDGDGNGATDGNKPLEMYSRNKNRA 900
DLLSFQGWT YGQDGVSGTDESDGNGNGTDESDGDGNGATDGNKPLEMYSRNKNRA
Sbjct: 841 DLLSFQGWTPGCEQYGQDGVSGTDESDGNGNGTDESDGDGNGATDGNKPLEMYSRNKNRA 900
Query: 901 VFGMESENEEVIQPNEEPQGPMSPEDQLQVSLPTSKYTLPVRCNRGIPPKRYEPDEDRHK 960
VFGMESENEEVIQPNEEPQGPMSPEDQLQVSLPTSKYTLPVRCNRGIPPKRYEPDEDRHK
Sbjct: 901 VFGMESENEEVIQPNEEPQGPMSPEDQLQVSLPTSKYTLPVRCNRGIPPKRYEPDEDRHK 960
Query: 961 KSKYPIANFVDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQAMEAEMSALYNNKT 1020
KSKYPIANFVDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQAMEAEMSALYNNKT
Sbjct: 961 KSKYPIANFVDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQAMEAEMSALYNNKT 1020
Query: 1021 WTLVELPQGKIPVGCRWVFSIKYNANGEIDRYKARLVAKGYTQTQ--------------- 1080
WTLVELPQGKIPVGCRWVFSIKYNANGEIDRYKARLVAKGYTQTQ
Sbjct: 1021 WTLVELPQGKIPVGCRWVFSIKYNANGEIDRYKARLVAKGYTQTQGIDFQETFSPVAKLN 1080
Query: 1081 ----------------------ECFLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYG 1140
FLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYG
Sbjct: 1081 TIRVLLSLAANLDWPLHQFDVKNAFLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYG 1140
Query: 1141 LKQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIA 1200
LKQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIA
Sbjct: 1141 LKQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIA 1200
Query: 1201 TLEKKLSGEFEMKNLGGLKYFLRIEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPV 1260
TLEKKLSGEFEMKNLGGLKYFLRIEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPV
Sbjct: 1201 TLEKKLSGEFEMKNLGGLKYFLRIEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPV 1260
Query: 1261 VQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVM 1320
VQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVM
Sbjct: 1261 VQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVM 1320
Query: 1321 RIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKK 1380
RIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKK
Sbjct: 1321 RIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKK 1380
Query: 1381 QSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNP 1391
QSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNP
Sbjct: 1381 QSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNP 1435
BLAST of IVF0019368 vs. NCBI nr
Match:
TYK09814.1 (putative polyprotein (retrotrasposon protein) [Cucumis melo var. makuwa])
HSP 1 Score: 2653 bits (6877), Expect = 0.0
Identity = 1335/1437 (92.90%), Postives = 1345/1437 (93.60%), Query Frame = 0
Query: 1 MAEETNNRQLIVDGNTVSSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFNG 60
MAEETNNRQLIVDGNTVSSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFNG
Sbjct: 1 MAEETNNRQLIVDGNTVSSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFNG 60
Query: 61 RNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNLI 120
RNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNLI
Sbjct: 61 RNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNLI 120
Query: 121 GNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQTGTLEDYFYTLQGLWKEIE 180
GNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQTGTLEDYFYTLQGLWKEIE
Sbjct: 121 GNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQTGTLEDYFYTLQGLWKEIE 180
Query: 181 FRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGHVR 240
FRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGHVR
Sbjct: 181 FRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGHVR 240
Query: 241 REDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSV--QEIHCLCHR 300
REDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSV +
Sbjct: 241 REDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSVPGDPLSLSSQV 300
Query: 301 RYRERNPVLIKVLYTLQHDTTKLKQFSSAPTVAAKAIVKTPVLKSM---DWYKELKKKQA 360
+ +E + V +T +++ T+ K K K DWYKELKKKQA
Sbjct: 301 QGKESSSNQGAVHFTTRYNKTEA--VLKCTHCGGKGHSKDTCFKIHGYPDWYKELKKKQA 360
Query: 361 EAKRGKVSIAVSGKNGDDSPSEGIIFLSSNLSNDNSTWIVDSGASDHMTFTKTDLTAECV 420
EAKRGKVSIAVSGKNGDDSPSEG IFLSSNLSND STWIVDSGASDHMTFTKTDLTAECV
Sbjct: 361 EAKRGKVSIAVSGKNGDDSPSEGTIFLSSNLSNDYSTWIVDSGASDHMTFTKTDLTAECV 420
Query: 421 TKKTEILNANGISYPVKCAGSIKVTSQLNLSNVLVVPSLATRLMSVSKLTKDRNCVVKMY 480
TKKTEILNANGISYPVKCAGSIKVTSQLNLSNVLVVPSLATRLMSVSKLTKDRNCVVKMY
Sbjct: 421 TKKTEILNANGISYPVKCAGSIKVTSQLNLSNVLVVPSLATRLMSVSKLTKDRNCVVKMY 480
Query: 481 SDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEVQNKIWTWHRRLGHPSL 540
SDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEVQNKIWTWHRRLGHPSL
Sbjct: 481 SDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEVQNKIWTWHRRLGHPSL 540
Query: 541 GYMKKLLPRLFKNNNLTVFNCDTCIKAKSHRVSYAPSSNKSNSPFDLIHSDVWGPAPVSS 600
GYMKKLLPRLFKNNNLTVFNCDTCIKAKSHRVSYAPSSNKSNSPFDLIHSDVWGPAPVSS
Sbjct: 541 GYMKKLLPRLFKNNNLTVFNCDTCIKAKSHRVSYAPSSNKSNSPFDLIHSDVWGPAPVSS 600
Query: 601 IDGNKWFVLFIDDCTRMTWVYLLKSKDEVPSVFKKFYTMIKTQFGKGIKFFRSDNGGEFI 660
IDGNKWFVLFIDDCTRMTWVYLLKSKDEVPSVFKKFYTMIKTQFGKGIKFFRSDNGGEFI
Sbjct: 601 IDGNKWFVLFIDDCTRMTWVYLLKSKDEVPSVFKKFYTMIKTQFGKGIKFFRSDNGGEFI 660
Query: 661 GKVLKDFFVQMGIVHETSCVGTPQQNGVAERKNRHILEMSRALLFEYHVPTKFWDKSILM 720
GKVLKDFFVQMGIVHETSCVGTPQQNGVAERKNRHILEMSRALLFEYHVPTKFWDKSILM
Sbjct: 661 GKVLKDFFVQMGIVHETSCVGTPQQNGVAERKNRHILEMSRALLFEYHVPTKFWDKSILM 720
Query: 721 AVYVLNRLPTKINNFQTPLKTLEKHHSIPSVLSLTPKIFGCVAYVHVPKTQRSKLSPCAV 780
AVYVLNRLPTKINNFQTPLKTLEKHHSIPSVLSLTPKIFGCVAYVHVPKTQRSKLSPCAV
Sbjct: 721 AVYVLNRLPTKINNFQTPLKTLEKHHSIPSVLSLTPKIFGCVAYVHVPKTQRSKLSPCAV 780
Query: 781 RCVFLGFGQNQKGYKCFDVDSRKWYVTMDVTFVEHEAFFKPTIQSDQGENSSESDVWKNK 840
RCVFLGFGQNQKGYKCFDVDSRKWYVTMDVTFVEHEAFFKPTIQSDQGENSSESDVWKNK
Sbjct: 781 RCVFLGFGQNQKGYKCFDVDSRKWYVTMDVTFVEHEAFFKPTIQSDQGENSSESDVWKNK 840
Query: 841 DLLSFQGWT----LYGQDGVSGTDESDGNGNGTDESDGDGNGATDGNKPLEMYSRNKNRA 900
DLLSFQGWT YGQDGVSGTDESDGNGNGTDESDGDGNGATDGNKPLEMYSRNKNRA
Sbjct: 841 DLLSFQGWTPGCEQYGQDGVSGTDESDGNGNGTDESDGDGNGATDGNKPLEMYSRNKNRA 900
Query: 901 VFGMESENEEVIQPNEEPQGPMSPEDQLQVSLPTSKYTLPVRCNRGIPPKRYEPDEDRHK 960
VFGMESENEEVIQPNEEPQGPMSPEDQLQVSLPTSKYTLPVRCNRGIPPKRYEPDEDRHK
Sbjct: 901 VFGMESENEEVIQPNEEPQGPMSPEDQLQVSLPTSKYTLPVRCNRGIPPKRYEPDEDRHK 960
Query: 961 KSKYPIANFVDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQAMEAEMSALYNNKT 1020
KSKYPIANFVDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQAMEAEMSALYNNKT
Sbjct: 961 KSKYPIANFVDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQAMEAEMSALYNNKT 1020
Query: 1021 WTLVELPQGKIPVGCRWVFSIKYNANGEIDRYKARLVAKGYTQTQ--------------- 1080
WTLVELPQGKIPVGCRWVFSIKYNANGEIDRYKARLVAKGYTQTQ
Sbjct: 1021 WTLVELPQGKIPVGCRWVFSIKYNANGEIDRYKARLVAKGYTQTQGIDFQETFSPVAKLN 1080
Query: 1081 ----------------------ECFLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYG 1140
FLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYG
Sbjct: 1081 TIRVLLSLAANLDWPLHQFDVKNAFLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYG 1140
Query: 1141 LKQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIA 1200
LKQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIV GNDTQEIA
Sbjct: 1141 LKQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVMGNDTQEIA 1200
Query: 1201 TLEKKLSGEFEMKNLGGLKYFLRIEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPV 1260
TLEKKLSGEFEMKNLGGLKYFL IEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPV
Sbjct: 1201 TLEKKLSGEFEMKNLGGLKYFLGIEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPV 1260
Query: 1261 VQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVM 1320
VQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVM
Sbjct: 1261 VQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVM 1320
Query: 1321 RIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKK 1380
RI+RYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKK
Sbjct: 1321 RILRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKK 1380
Query: 1381 QSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNP 1391
QSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNP
Sbjct: 1381 QSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNP 1435
BLAST of IVF0019368 vs. NCBI nr
Match:
TYJ98005.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 2100 bits (5440), Expect = 0.0
Identity = 1111/1437 (77.31%), Postives = 1122/1437 (78.08%), Query Frame = 0
Query: 1 MAEETNNRQLIVDGNTVSSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFNG 60
MAEETNNRQLIVDGNTVSSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFNG
Sbjct: 1 MAEETNNRQLIVDGNTVSSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFNG 60
Query: 61 RNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNLI 120
RNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNLI
Sbjct: 61 RNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNLI 120
Query: 121 GNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQTGTLEDYFYTLQGLWKEIE 180
GNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQTGTLEDYFYTLQGLWKEIE
Sbjct: 121 GNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQTGTLEDYFYTLQGLWKEIE 180
Query: 181 FRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGHVR 240
FRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGHVR
Sbjct: 181 FRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGHVR 240
Query: 241 REDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSV--QEIHCLCHR 300
REDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSV +
Sbjct: 241 REDVRQSVMVGKSTDLSNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSVPGDPLSLSSQV 300
Query: 301 RYRERNPVLIKVLYTLQHDTTKLKQFSSAPTVAAKAIVKTPVLKSM---DWYKELKKKQA 360
+ +E + V +T +++ T+ K K K DWYKELKKKQA
Sbjct: 301 QGKESSSNQGAVHFTTRYNKTEA--VLKCTHCGGKGHSKDTCFKIHGYPDWYKELKKKQA 360
Query: 361 EAKRGKVSIAVSGKNGDDSPSEGIIFLSSNLSNDNSTWIVDSGASDHMTFTKTDLTAECV 420
EAKRGKVSIAVSGKNGDDSPSEG IFLSSNLSND STWIVDSGASDHMTFTKTDLTAECV
Sbjct: 361 EAKRGKVSIAVSGKNGDDSPSEGTIFLSSNLSNDYSTWIVDSGASDHMTFTKTDLTAECV 420
Query: 421 TKKTEILNANGISYPVKCAGSIKVTSQLNLSNVLVVPSLATRLMSVSKLTKDRNCVVKMY 480
TKKTEILNANGISYPVKCAGSIKVTSQLNLSNVLVVPSLATRLMSVSKLTKDRNCVVKMY
Sbjct: 421 TKKTEILNANGISYPVKCAGSIKVTSQLNLSNVLVVPSLATRLMSVSKLTKDRNCVVKMY 480
Query: 481 SDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEVQNKIWTWHRRLGHPSL 540
SDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEVQNKIWTWHRRLGHPSL
Sbjct: 481 SDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLVVDQTEVQNKIWTWHRRLGHPSL 540
Query: 541 GYMKKLLPRLFKNNNLTVFNCDTCIKAKSHRVSYAPSSNKSNSPFDLIHSDVWGPAPVSS 600
GYMKKLLPRLFKNNNLTVFNCDTCIKAKSHRVSYAPSSNKSNSPFDLIHSDVWGPAP
Sbjct: 541 GYMKKLLPRLFKNNNLTVFNCDTCIKAKSHRVSYAPSSNKSNSPFDLIHSDVWGPAP--- 600
Query: 601 IDGNKWFVLFIDDCTRMTWVYLLKSKDEVPSVFKKFYTMIKTQFGKGIKFFRSDNGGEFI 660
Sbjct: 601 ------------------------------------------------------------ 660
Query: 661 GKVLKDFFVQMGIVHETSCVGTPQQNGVAERKNRHILEMSRALLFEYHVPTKFWDKSILM 720
Sbjct: 661 ------------------------------------------------------------ 720
Query: 721 AVYVLNRLPTKINNFQTPLKTLEKHHSIPSVLSLTPKIFGCVAYVHVPKTQRSKLSPCAV 780
Sbjct: 721 ------------------------------------------------------------ 780
Query: 781 RCVFLGFGQNQKGYKCFDVDSRKWYVTMDVTFVEHEAFFKPTIQSDQGENSSESDVWKNK 840
NQKGYKCFDVDSRKWYVTMDVTF+EHEAFFKPTIQSDQGENSSESDVWKNK
Sbjct: 781 ---------NQKGYKCFDVDSRKWYVTMDVTFMEHEAFFKPTIQSDQGENSSESDVWKNK 840
Query: 841 DLLSFQGWT----LYGQDGVSGTDESDGNGNGTDESDGDGNGATDGNKPLEMYSRNKNRA 900
DLLSFQGWT YGQDGVSGTDESDGNGNGTDESDGDGNGATDGNKPLEMYSRNKNRA
Sbjct: 841 DLLSFQGWTPGCEQYGQDGVSGTDESDGNGNGTDESDGDGNGATDGNKPLEMYSRNKNRA 900
Query: 901 VFGMESENEEVIQPNEEPQGPMSPEDQLQVSLPTSKYTLPVRCNRGIPPKRYEPDEDRHK 960
VFGMESENEEVIQPNEEPQGPMSPEDQLQVSLPTSKYTLPVRCNRGIPPKRYEPDEDRHK
Sbjct: 901 VFGMESENEEVIQPNEEPQGPMSPEDQLQVSLPTSKYTLPVRCNRGIPPKRYEPDEDRHK 960
Query: 961 KSKYPIANFVDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQAMEAEMSALYNNKT 1020
KSKYPIANFVDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQAMEAEMSALYNNKT
Sbjct: 961 KSKYPIANFVDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQAMEAEMSALYNNKT 1020
Query: 1021 WTLVELPQGKIPVGCRWVFSIKYNANGEIDRYKARLVAKGYTQTQ--------------- 1080
WTLVELPQGKIPVGCRWVFSIKYNANGEIDRYKARLVAKGYTQTQ
Sbjct: 1021 WTLVELPQGKIPVGCRWVFSIKYNANGEIDRYKARLVAKGYTQTQGIDFQETFSPVAKLN 1080
Query: 1081 ----------------------ECFLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYG 1140
FLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYG
Sbjct: 1081 TIRVLLSLAANLDWPLHQFDVKNAFLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYG 1140
Query: 1141 LKQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIA 1200
LKQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIV GNDTQEIA
Sbjct: 1141 LKQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVMGNDTQEIA 1200
Query: 1201 TLEKKLSGEFEMKNLGGLKYFLRIEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPV 1260
TLEKKLSGEFEMKNLGGLKYFL IEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPV
Sbjct: 1201 TLEKKLSGEFEMKNLGGLKYFLGIEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPV 1212
Query: 1261 VQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVM 1320
VQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVM
Sbjct: 1261 VQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVM 1212
Query: 1321 RIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKK 1380
RI+RYLKGCPGKG YFTFVGGNLVTWRSKK
Sbjct: 1321 RILRYLKGCPGKG-------------------------------YFTFVGGNLVTWRSKK 1212
Query: 1381 QSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNP 1391
QSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNP
Sbjct: 1381 QSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNP 1212
BLAST of IVF0019368 vs. NCBI nr
Match:
RVW36328.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 1391 bits (3601), Expect = 0.0
Identity = 737/1463 (50.38%), Postives = 968/1463 (66.17%), Query Frame = 0
Query: 1 MAEETNNRQ-LIVDGNTVSSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFN 60
MAE + Q LI +++ S +TE LT+A + QP L + P+ I
Sbjct: 1 MAESKDITQPLIPQTDSIFSDLTTRMTEVLTRAQ-TSPQPLLA-----DSSTTPIGIKLE 60
Query: 61 GRNYGVWSQMVEVLLASKDKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNL 120
G NY +WSQ+VE+ ++ KDKLG+ING+ QP D ++RW ++N++VKGW+++S+DP+L
Sbjct: 61 GSNYALWSQVVEMYISGKDKLGYINGDSPQPPETDPSFRRWRTENAIVKGWLINSMDPSL 120
Query: 121 IGNFIRFSTAKEVWDSIKLTFFDGNDNTQIYDLEVKVYGLKQTG-TLEDYFYTLQGLWKE 180
I NFIRF TAK+VWDS +T+FDG D +Q+YDL +V +KQ G ++E Y+ LQGLW+E
Sbjct: 121 IANFIRFPTAKQVWDSAAITYFDGTDTSQVYDLRRRVTRMKQAGGSIEKYYNDLQGLWRE 180
Query: 181 IEFRKPNPMTCPIDIEKYNRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGH 240
I+FR+PNPM C IDI+KYN + Q+ +VY FL GL+DR D R+++L++ P PTVE+ Y
Sbjct: 181 IDFRRPNPMECAIDIQKYNSILQEDQVYTFLDGLDDRLDKTRSDVLQIKPFPTVEQAYAF 240
Query: 241 VRREDVRQSVMVGKSTDLSNSVAMIVQGAK----QVAGVPHISTNSTHGNSNNSVQEIHC 300
VRRE+VRQ+VM+ + L +V M +G K Q+ P + S+ G SN+S
Sbjct: 241 VRREEVRQTVMISGADTLPGAV-MASKGIKGSHHQMPPKPGALSLSS-GKSNSS------ 300
Query: 301 LCHRRYRERNP---VLIKVLYTLQHDTTKLKQFSSAPTVAAKAIVKTPVLKSMDWYKELK 360
++ + P + +H + P DW+ +L
Sbjct: 301 -----FKTKPPSDGMKCTHCGNTKHTRDTCFKLHGYP----------------DWWNDL- 360
Query: 361 KKQAEAKR------------------GKVSIAVSGKNGDDSPSEGIIFLSSNLSNDNSTW 420
QA KR +S+ ++ DS + +F S D+ W
Sbjct: 361 --QARKKREIIVNDNHTGRAAVVTCDASLSLIPQAESSHDSGTSSKVFHIS-THKDDEDW 420
Query: 421 IVDSGASDHMTFTKTDLTAECVTKKTEILNANGISYPVKCAGSIKVTSQLNLSNVLVVPS 480
I+DSGA+DHMTF D + +++ + NANG++YPV AG++ ++ L+LSN L+VPS
Sbjct: 421 ILDSGATDHMTFDSKDFSNTTQPRRSCVANANGVTYPVTGAGTVTLSPSLSLSNTLLVPS 480
Query: 481 LATRLMSVSKLTKDRNCVVKMYSDYFIIQDILTKEIIGRGIERDGLYHLEDLKAGRANLV 540
L+ RLMSVS++T D NCVV MYS + ++QDILTKEIIGRG +R GLY+++ +GRAN +
Sbjct: 481 LSNRLMSVSQVTSDLNCVVLMYSTFCLLQDILTKEIIGRGTKRGGLYYVDAFSSGRANHM 540
Query: 541 VDQT-EVQNKIWTWHRRLGHPSLGYMKKLLPRLFKNNNLTVFNCDTCIKAKSHRVSYAPS 600
+ + +IW WH RLGHPS GY+K LLP LF F CDTCI AKSHR SY S
Sbjct: 541 HHKVGNKERQIWLWHHRLGHPSFGYLKHLLPGLFSKATHLDFKCDTCILAKSHRASYPMS 600
Query: 601 SNKSNSPFDLIHSDVWGPAPVSSIDGNKWFVLFIDDCTRMTWVYLLKSKDEVPSVFKKFY 660
NKS PFDLIHSDVWGP+ V++ G++WFV+F+DDCTRMTW+YLLK KDEV S+F+ F+
Sbjct: 601 MNKSMIPFDLIHSDVWGPSLVTTSSGHRWFVIFVDDCTRMTWLYLLKHKDEVFSIFQSFH 660
Query: 661 TMIKTQFGKGIKFFRSDNGGEFIGKVLKDFFVQMGIVHETSCVGTPQQNGVAERKNRHIL 720
M++TQF IK RSDNGGE++ + + +F GI+HETSC TPQQNG+AERKNRHIL
Sbjct: 661 AMVQTQFSARIKILRSDNGGEYVNQQFQTYFNNHGILHETSCSQTPQQNGIAERKNRHIL 720
Query: 721 EMSRALLFEYHVPTKFWDKSILMAVYVLNRLPTKINNFQTPLKTLEKHHSIPSVLSLTPK 780
E +RALL HVP ++W ++ AVY+LNR+PTK+ FQTPLK L H S+P+VL + P+
Sbjct: 721 ETARALLINAHVPNRYWSDAVTTAVYLLNRMPTKVLQFQTPLKVLSYHVSLPTVLMIPPR 780
Query: 781 IFGCVAYVHVPKTQRSKLSPCAVRCVFLGFGQNQKGYKCFDVDSRKWYVTMDVTFVEHEA 840
IFGCVA+VH+ K QR+KL PCAVRC+FLG+G +KGY+C+D +++ Y+TMDVTF+E E
Sbjct: 781 IFGCVAFVHLHKNQRTKLDPCAVRCLFLGYGVQKKGYRCYDPIAKRSYITMDVTFLESEF 840
Query: 841 FFKPTIQSD-QGENSSESDVWKNKDLLSFQGWTLYGQDGVSGTDESDGNGNGTDESDGDG 900
FF P S QGE E W + ++L G + D++D E D
Sbjct: 841 FFSPISNSPLQGEIYGEERNWSDVEVLEV------GDNPTHPNDDND-----LVEHDPVP 900
Query: 901 NGATDGNKPLEMYSRNKNRAVFGMESENEEVIQPNEEPQGPM----SPEDQLQVS-LPTS 960
+P+ S + VF + PN+ P + SP LQ + + TS
Sbjct: 901 EPLRTEAEPVPESSEDAESDVFP------HSLVPNDPPTENIPEVSSPTTPLQTNAIDTS 960
Query: 961 K-YTLPVRCNRGIPPKRYEPDEDRHKKSKYPIANFVDTKSLSGPVKRFNENLLSCKIPEN 1020
Y LP R NRG PP RY PD + ++SKYPIAN V T+ LS P++ F L SC+IP
Sbjct: 961 AGYVLPFRHNRGKPPNRYSPDIEE-RRSKYPIANHVSTQRLSEPLRAFAHTLSSCQIPSR 1020
Query: 1021 VDEAKSDPNWSQAMEAEMSALYNNKTWTLVELPQGKIPVGCRWVFSIKYNANGEIDRYKA 1080
V+EA SDP W+QA++ E+ AL N TW L LP+G+ V C+W+FSIKY A+G IDRYKA
Sbjct: 1021 VEEAFSDPKWAQAIKEELEALQKNNTWVLSVLPEGRKTVRCKWIFSIKYKADGSIDRYKA 1080
Query: 1081 RLVAKGYTQ-------------------------------------TQECFLHGELKEEV 1140
RLVAKGYTQ + FLHG+L+EE+
Sbjct: 1081 RLVAKGYTQKHGIDYQETFSPVAKLKTVRVLLSLAANLDWPLHQLDVKNAFLHGDLEEEI 1140
Query: 1141 YMEQPPGYKSTNAKPMVCKLNKALYGLKQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKR 1200
YM+ PPGY +T+ + C+L +ALYGLKQSPRAWFGR AM+ YGF+Q +SDHTLFLK
Sbjct: 1141 YMDIPPGYTATSEAKIACRLQRALYGLKQSPRAWFGRLSSAMRKYGFQQSNSDHTLFLKH 1200
Query: 1201 NQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLRIEVMRSKQGIV 1260
K+TALI+YVDDMI+TG+D +EI+ L+ +LS EFEMKNLGGLKYFL IEV RS+QGI
Sbjct: 1201 RLGKITALIVYVDDMIITGDDVEEISKLQDQLSTEFEMKNLGGLKYFLGIEVARSRQGIF 1260
Query: 1261 LSQRKYILDLLAEIGMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTR 1320
LSQRKYILDLLAE+G+L+C+PAD P+VQ KLGE+ DQVPA+K+RYQRLVGKLIYL+HTR
Sbjct: 1261 LSQRKYILDLLAEVGLLECKPADIPIVQNHKLGEYVDQVPADKQRYQRLVGKLIYLSHTR 1320
Query: 1321 PDIAYGVSVVSQFMHNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAG 1380
PDIAY VSVVSQFMH PSEDHMDAVMRI+RYLK PGKG+ F KNGHL V+G+TDADWAG
Sbjct: 1321 PDIAYAVSVVSQFMHWPSEDHMDAVMRILRYLKSSPGKGLMFSKNGHLKVAGYTDADWAG 1380
Query: 1381 SVSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELG 1391
+++DR+STAGYFTFVGGNLVTWRSKKQ VVALSSAEAEFRG+ KGICEL+WL++LL E+G
Sbjct: 1381 NITDRKSTAGYFTFVGGNLVTWRSKKQKVVALSSAEAEFRGMVKGICELIWLKKLLAEIG 1406
BLAST of IVF0019368 vs. NCBI nr
Match:
RVX17869.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 1278 bits (3308), Expect = 0.0
Identity = 673/1428 (47.13%), Postives = 904/1428 (63.31%), Query Frame = 0
Query: 18 SSKFIEDLTEKLTKAMFRNFQPPLGPATGPEGGLPPMTIVFNGRNYGVWSQMVEVLLASK 77
S ++T K+T+A+ + P L T P L + I +G NY +WSQ+VE+ ++ K
Sbjct: 259 SDSLFSEITAKMTEALTKVQPPTL--TTEPSTAL--IGIKLDGTNYALWSQVVEMYISGK 318
Query: 78 DKLGHINGERTQPASNDTGYKRWMSDNSMVKGWILSSLDPNLIGNFIRFSTAKEVWDSIK 137
DKLG+ING+ QP S D +++W +DN++VKGW+++S+DP LIGNFIRF TAK VWDSI
Sbjct: 319 DKLGYINGDIPQPPSTDPTFRKWRTDNAIVKGWLINSMDPFLIGNFIRFPTAKLVWDSIA 378
Query: 138 LTFFDGNDNTQIYDLEVKVYGLKQTG-TLEDYFYTLQGLWKEIEFRKPNPMTCPIDIEKY 197
T+FDG+D +Q+YDL +V LKQ G +LE + LQGLW+EI+FR+PNPM C +DI Y
Sbjct: 379 TTYFDGSDTSQVYDLRRRVTQLKQAGGSLEKCYNDLQGLWREIDFRRPNPMECAVDIHNY 438
Query: 198 NRVEQDRKVYIFLGGLEDRFDGIRAEILRMTPLPTVEETYGHVRREDVRQSVMVGKSTDL 257
N + Q+ +VY+FL GL+DR D IR ++L++ P PTVE+ Y HVRRE +RQSVM+ + D
Sbjct: 439 NLLLQEDRVYVFLDGLDDRLDKIRGDVLQLRPFPTVEQAYAHVRREALRQSVMITGNADA 498
Query: 258 SNSVAMIVQGAKQVAGVPHISTNSTHGNSNNSVQEIHCLCHRRYRERNPVLIKVL-YTLQ 317
+ + +G K + + + ++ S S + + C + K+ Y+
Sbjct: 499 VSGAVLATKGLKLGSSIQPPTVHNGMPKSRTSSEGLKCSHCGNSKHTCDTCFKLHGYSDW 558
Query: 318 HDTTKLKQFSSAPTV---AAKAIVKTPVLKSMDWYKELKKKQAEAKRGKVSIAVSGKNGD 377
+ + K+ A T +A A+V T AE + + +G+
Sbjct: 559 WNDLRAKKGRDAGTKDEDSATAVVAT----------------AEPQLSFIPQMTMPNSGN 618
Query: 378 DSPSEGIIFLSSNLSNDNSTWIVDSGASDHMTFTKTDLTAECVTKKTEILNANGISYPVK 437
G +S W++DSGA+DHMTFT D T + ++T NANG+ PV
Sbjct: 619 C----GYACYTSTNDGYRGAWLLDSGATDHMTFTAMDFTMTSLPRRTNTANANGVISPVT 678
Query: 438 CAGSIKVTSQLNLSNVLVVPSLATRLMSVSKLTKDRNCVVKMYSDYFIIQDILTKEIIGR 497
AG++ ++ +L L N L VPSL+ +L+SVS++T D NC+V +Y ++QDILTKEIIGR
Sbjct: 679 GAGTVTLSPKLQLHNTLFVPSLSHKLLSVSQVTSDLNCIVLIYPTLCLLQDILTKEIIGR 738
Query: 498 GIERDGLYHLEDLKAGRANLVVDQTEV-QNKIWTWHRRLGHPSLGYMKKLLPRLFKNNNL 557
G +R GLY++EDL GRA+ +V +N++W WHRRLGHPS YMK L P LF
Sbjct: 739 GTKRGGLYYMEDLSVGRAHHTQHTLDVKENELWLWHRRLGHPSFTYMKHLFPDLFSQLKN 798
Query: 558 TVFNCDTCIKAKSHRVSYAPSSNKSNSPFDLIHSDVWGPAPVSSIDGNKWFVLFIDDCTR 617
F C+TCI AKS+R S+ NK ++PF LIHSDVWG +P+++++G KWFVLF+DDCTR
Sbjct: 799 FDFQCETCILAKSYRASFPLHLNKKDTPFALIHSDVWGLSPITTVNGFKWFVLFVDDCTR 858
Query: 618 MTWVYLLKSKDEVPSVFKKFYTMIKTQFGKGIKFFRSDNGGEFIGKVLKDFFVQMGIVHE 677
MTW+YLLK KDEV VFK F+ M++TQF ++ RSDNGGE++ +++F Q GI+HE
Sbjct: 859 MTWLYLLKHKDEVLGVFKSFHAMVQTQFSAKVQVLRSDNGGEYVNHQFREYFQQHGIIHE 918
Query: 678 TSCVGTPQQNGVAERKNRHILEMSRALLFEYHVPTKFWDKSILMAVYVLNRLPTKINNFQ 737
TSC TPQQNG+ ERKNRH+LE +RALL H PT+FW ++ AV++LNR+ +K+ +FQ
Sbjct: 919 TSCPQTPQQNGIVERKNRHVLETARALLVGAHAPTRFWADAVTTAVHLLNRMLSKVLDFQ 978
Query: 738 TPLKTLEKHHSIPSVLSLTPKIFGCVAYVHVPKTQRSKLSPCAVRCVFLGFGQNQKGYKC 797
TPL+ L + ++P++L L P +FGCVAYVH+ K Q++KL PCA C+FLG+ +QKGY+C
Sbjct: 979 TPLQALSGYTAVPAILMLPPHVFGCVAYVHLHKNQQTKLDPCARCCLFLGYAFHQKGYRC 1038
Query: 798 FDVDSRKWYVTMDVTFVEHEAFFKPTIQSDQGENSSESDVWKNKDLLSFQGWTLYGQDGV 857
+D+ S + Y+TMDVTF+E E FF P QGE E Q WT V
Sbjct: 1039 YDLTSGRMYITMDVTFMETETFFPPNSPL-QGETRQEE-----------QNWTELNWPSV 1098
Query: 858 SGTDESDGNGNGTDESDGDGNGATDGNKPLEMYSRNKNRAVFGMESENEE----VIQPNE 917
S + + R E ++ V P+
Sbjct: 1099 S---------------------------EIHVEPRQPEHVSLATEHHEDDHEAHVTSPST 1158
Query: 918 EPQGPMSPEDQLQVS-------LPTSKYTLPVRCNRGIPPKRYEPDEDRHKKSKYPIANF 977
P+ P +PE+ +VS P Y LP R NRG P RY PD + ++S+YPIAN+
Sbjct: 1159 IPENP-TPENDPEVSSFNTNILAPPIGYVLPNRHNRGKTPSRYSPDIEG-RRSRYPIANY 1218
Query: 978 VDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQAMEAEMSALYNNKTWTLVELPQG 1037
V TK L+ P+K F N+ C +P V+EA DP W+QA++ EM L NKTW LV L +G
Sbjct: 1219 VPTKKLNEPLKTFVHNISGCHVPTRVEEALGDPKWTQAIKDEMETLMKNKTWNLVPLSEG 1278
Query: 1038 KIPVGCRWVFSIKYNANGEIDRYKARLVAKGYTQT------------------------- 1097
K VGC+WVFSIK+ A+G I+RYKARLVAKGYTQT
Sbjct: 1279 KKTVGCKWVFSIKHKADGSIERYKARLVAKGYTQTYGIDYQDTFSPVAKLNTVRVLISLA 1338
Query: 1098 ------------QECFLHGELKEEVYMEQPPGYKSTNAKPMVCKLNKALYGLKQSPRAWF 1157
+ FLHG L+EEVYM+ PPGY T
Sbjct: 1339 ANLNWPLHQFDVKNAFLHGGLEEEVYMDIPPGYSVTT----------------------- 1398
Query: 1158 GRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGE 1217
G + ++DHTLFLK+ Q K+TALI+YVDDM++TG+D +EI+ L+ +L+ E
Sbjct: 1399 ----------GTNESNADHTLFLKKQQGKVTALIVYVDDMVITGDDIEEISRLQGQLASE 1458
Query: 1218 FEMKNLGGLKYFLRIEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTPVVQGVKLGEF 1277
FEMKNLGGLKYFL I+V RS QGI LSQRKY+LDLL+E+G+L+C+P DTP+VQ KLG +
Sbjct: 1459 FEMKNLGGLKYFLGIKVARSTQGIFLSQRKYVLDLLSEVGLLECKPVDTPIVQNHKLGIY 1518
Query: 1278 PDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVMRIIRYLKGC 1337
P+Q P +K RYQRLV KLIYL+HTRPDIAY VSVVSQFMH PSE+HM+AV+RI+RYLK
Sbjct: 1519 PNQKPIDKGRYQRLVSKLIYLSHTRPDIAYAVSVVSQFMHCPSEEHMEAVIRILRYLKSS 1578
Query: 1338 PGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSA 1391
PGKG+ F KN H+ V G+TDADWAG++SDR+ST+GYFTFVGGNLVTWRSKKQ VVALSSA
Sbjct: 1579 PGKGLMFSKNDHVRVDGYTDADWAGNISDRKSTSGYFTFVGGNLVTWRSKKQKVVALSSA 1588
BLAST of IVF0019368 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 340.1 bits (871), Expect = 8.4e-93
Identity = 178/477 (37.32%), Postives = 265/477 (55.56%), Query Frame = 0
Query: 955 YPIANFVDTKSLSGPVKRFNENLLSCKIPENVDEAKSDPNWSQAMEAEMSALYNNKTWTL 1014
+ I+ F+ + +S F + K P +EAK W AM+ E+ A+ TW +
Sbjct: 58 HDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEI 117
Query: 1015 VELPQGKIPVGCRWVFSIKYNANGEIDRYKARLVAKGYTQTQ------------------ 1074
LP K P+GC+WV+ IKYN++G I+RYKARLVAKGYTQ +
Sbjct: 118 CTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVK 177
Query: 1075 -------------------ECFLHGELKEEVYMEQPPGYKSTNAKPM----VCKLNKALY 1134
FL+G+L EE+YM+ PPGY + + VC L K++Y
Sbjct: 178 LILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIY 237
Query: 1135 GLKQSPRAWFGRFCRAMQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEI 1194
GLKQ+ R WF +F + +GF Q SDHT FLK +++YVDD+I+ N+ +
Sbjct: 238 GLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAV 297
Query: 1195 ATLEKKLSGEFEMKNLGGLKYFLRIEVMRSKQGIVLSQRKYILDLLAEIGMLDCRPADTP 1254
L+ +L F++++LG LKYFL +E+ RS GI + QRKY LDLL E G+L C+P+ P
Sbjct: 298 DELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVP 357
Query: 1255 VVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAV 1314
+ V + + Y+RL+G+L+YL TR DI++ V+ +SQF P H AV
Sbjct: 358 MDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAV 417
Query: 1315 MRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSK 1374
M+I+ Y+KG G+G+ + + + F+DA + RRST GY F+G +L++W+SK
Sbjct: 418 MKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSK 477
Query: 1375 KQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHN 1391
KQ VV+ SSAEAE+R ++ E++WL + EL ++ L+CD+ AI I+ N
Sbjct: 478 KQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATN 534
BLAST of IVF0019368 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 185.7 bits (470), Expect = 2.6e-46
Identity = 95/228 (41.67%), Postives = 139/228 (60.96%), Query Frame = 0
Query: 1136 LIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLRIEVMRSKQGIVLSQRKYI 1195
L++YVDD+++TG+ + L +LS F MK+LG + YFL I++ G+ LSQ KY
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 1196 LDLLAEIGMLDCRPADTPVV----QGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDI 1255
+L GMLDC+P TP+ V ++PD P++ ++ +VG L YL TRPDI
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPD--PSD---FRSIVGALQYLTLTRPDI 122
Query: 1256 AYGVSVVSQFMHNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVS 1315
+Y V++V Q MH P+ D + R++RY+KG G+ KN L+V F D+DWAG S
Sbjct: 123 SYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTS 182
Query: 1316 DRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLW 1360
RRST G+ TF+G N+++W +K+Q V+ SS E E+R +A EL W
Sbjct: 183 TRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of IVF0019368 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 82.4 bits (202), Expect = 3.1e-15
Identity = 38/76 (50.00%), Postives = 51/76 (67.11%), Query Frame = 0
Query: 981 KIPENVDEAKSDPNWSQAMEAEMSALYNNKTWTLVELPQGKIPVGCRWVFSIKYNANGEI 1040
K P++V A DP W QAM+ E+ AL NKTW LV P + +GC+WVF K +++G +
Sbjct: 26 KEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTL 85
Query: 1041 DRYKARLVAKGYTQTQ 1057
DR KARLVAKG+ Q +
Sbjct: 86 DRLKARLVAKGFHQEE 101
BLAST of IVF0019368 vs. TAIR 10
Match:
ATMG00240.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 66.6 bits (161), Expect = 1.8e-10
Identity = 29/82 (35.37%), Postives = 45/82 (54.88%), Query Frame = 0
Query: 1242 IYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGF 1301
+YL TRPD+ + V+ +SQF M AV +++ Y+KG G+G+ + L + F
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 1302 TDADWAGSVSDRRSTAGYFTFV 1324
D+DWA RRS G+ + V
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q94HW2 | 6.8e-156 | 29.18 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
| Q9ZT94 | 3.7e-154 | 28.64 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
| P10978 | 4.7e-149 | 33.48 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
| P04146 | 1.6e-104 | 24.42 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
| P92519 | 3.7e-45 | 41.67 | Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7T8G9 | 0.0e+00 | 93.25 | Putative polyprotein (Retrotrasposon protein) OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A5D3CF38 | 0.0e+00 | 92.90 | Putative polyprotein (Retrotrasposon protein) OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A5D3BHP1 | 0.0e+00 | 77.31 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G... | [more] |
| A0A2N9IDK7 | 0.0e+00 | 50.61 | Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB... | [more] |
| A0A2N9G4T4 | 0.0e+00 | 51.62 | Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0037867.1 | 0.0 | 93.25 | putative polyprotein (retrotrasposon protein) [Cucumis melo var. makuwa] | [more] |
| TYK09814.1 | 0.0 | 92.90 | putative polyprotein (retrotrasposon protein) [Cucumis melo var. makuwa] | [more] |
| TYJ98005.1 | 0.0 | 77.31 | gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
| RVW36328.1 | 0.0 | 50.38 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
| RVX17869.1 | 0.0 | 47.13 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G23160.1 | 8.4e-93 | 37.32 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
| ATMG00810.1 | 2.6e-46 | 41.67 | DNA/RNA polymerases superfamily protein | [more] |
| ATMG00820.1 | 3.1e-15 | 50.00 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |
| ATMG00240.1 | 1.8e-10 | 35.37 | Gag-Pol-related retrotransposon family protein | [more] |
