IVF0019308 (gene) Melon (IVF77) v1

Overview


Name	IVF0019308
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ATP synthase subunit b, chloroplastic
Location	tig00000662: 141127 .. 142456 (+)
RNA-Seq Expression	IVF0019308
Synteny	IVF0019308

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAATGTAACCGATTCTTTCATTTCTTTGGGTTACTGGCCATCCGCCGAGAGTTTCGGATTTAATACCGATATTTTAGCAACAAATCCAATAAATCTAAGCGTAGTGCTTGGTGTATTGATTTTTTTTGGAAAGGGAGTGTGTGCGAGTTGTTTATTTCAAGAATAAGTTGGATACAACCAACTGTACTTTTCTAGTTATAACTACGAAAAGGTGCATGATCCCGCGAATTACTTCTGACAAAATGAAGAAATCATATTGAAGAACCATAGCATTTCGTGATTCATTGGTAAATCAACTTTGATTCTCTATCAACCAATAATGTGGGACTATTAACATGGTTAAAACGTTTGAAGTCCAGACGTAGCATGGTACTCTTTCTACTACTATGTTAATACATAGTTAATACATAAATCGTTTCAAATAGTTGGGCTTTTTTTTCGATATAGAACACTCATGTCGATAAAATGATTTGAACCCCCCTTTTTTATTATTTTCTATTTTAATAGAATATTAGAATTTTTTTGTAAAAAACTAAAAAAATGAGGATTTCACCCTCATTTTTTCTTTTTTATCCAATGCTGAATCGATGACCTATGTTATGTATAAAGTAAGAAAATTTTTTTGGATTTCAAGAAAAAAAAAGAAACAACTTTGCTGACAATTGTTTGTTTGGTCAGAAGAGTCCTCCGAATATTCGGGTCTTGGATTAATGATCCATATTTTTTTTTTTTTCTTTGTGGAATATGAATAGAGAAAAGAGGATAGGCTCATTACATTCAAAAAGATATATGGGAATTTCTCAGAAATAATTGCAATGATTGAGCGTGAGAGCCAAATGAATCGAAAGATTCATGTTTGGTTCGGGAAGGGATCGTCGAAGTTTTGAAATGAATGGAAAGACAATCTACTTTCATTAAGTGATTTATTAGATAATCGAAAACAGAGGATCTTGAAAACAATTCAAAATTCAGAAGAACTACGTGAGGGGGCCATTGAACAGCTGGAAAAAGCCCGGGCTCGCTTACGAAAAGTTGAAATGGAAGCCGATCAGTTTCGAGTGAATGGATATTCTGAGATAGAACGAGAAAAATTGAATTTGATTAATTCAACTTCTAAAAGTTTGGAACAATTAGAAAATTATAAAAATGAAACTATTCGTTTTGAACAACAAAAAGCGATTAATCAAGTACGACAACAGGTTTTCCAACAAGCCTTACAAGGAGCTCTAGGAACTCTGAATAGTTGTTTGGACAACGAGTTACATTTACGTACCATCAGTGCTAATATTGGCATGTTTGGGACGATGAAAGAAATAACTAACTGA

mRNA sequence

ATGAAAAATGTAACCGATTCTTTCATTTCTTTGGGTTACTGGCCATCCGCCGAGAGTTTCGGATTTAATACCGATATTTTAGCAACAAATCCAATAAATCTAAGCGTAGTGCTTGGTGTATTGATTTTTTTTGGAAAGGGAGTGTACAATCTACTTTCATTAAGTGATTTATTAGATAATCGAAAACAGAGGATCTTGAAAACAATTCAAAATTCAGAAGAACTACGTGAGGGGGCCATTGAACAGCTGGAAAAAGCCCGGGCTCGCTTACGAAAAGTTGAAATGGAAGCCGATCAGTTTCGAGTGAATGGATATTCTGAGATAGAACGAGAAAAATTGAATTTGATTAATTCAACTTCTAAAAGTTTGGAACAATTAGAAAATTATAAAAATGAAACTATTCGTTTTGAACAACAAAAAGCGATTAATCAAGTACGACAACAGGTTTTCCAACAAGCCTTACAAGGAGCTCTAGGAACTCTGAATAGTTGTTTGGACAACGAGTTACATTTACGTACCATCAGTGCTAATATTGGCATGTTTGGGACGATGAAAGAAATAACTAACTGA

Coding sequence (CDS)

ATGAAAAATGTAACCGATTCTTTCATTTCTTTGGGTTACTGGCCATCCGCCGAGAGTTTCGGATTTAATACCGATATTTTAGCAACAAATCCAATAAATCTAAGCGTAGTGCTTGGTGTATTGATTTTTTTTGGAAAGGGAGTGTACAATCTACTTTCATTAAGTGATTTATTAGATAATCGAAAACAGAGGATCTTGAAAACAATTCAAAATTCAGAAGAACTACGTGAGGGGGCCATTGAACAGCTGGAAAAAGCCCGGGCTCGCTTACGAAAAGTTGAAATGGAAGCCGATCAGTTTCGAGTGAATGGATATTCTGAGATAGAACGAGAAAAATTGAATTTGATTAATTCAACTTCTAAAAGTTTGGAACAATTAGAAAATTATAAAAATGAAACTATTCGTTTTGAACAACAAAAAGCGATTAATCAAGTACGACAACAGGTTTTCCAACAAGCCTTACAAGGAGCTCTAGGAACTCTGAATAGTTGTTTGGACAACGAGTTACATTTACGTACCATCAGTGCTAATATTGGCATGTTTGGGACGATGAAAGAAATAACTAACTGA

Protein sequence

MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGVYNLLSLSDLLDNRKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN

Homology

[Close]

BLAST of IVF0019308 vs. ExPASy Swiss-Prot
Match: Q4VZP7 (ATP synthase subunit b, chloroplastic OS=Cucumis sativus OX=3659 GN=atpF PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 1.6e-92
Identity = 183/189 (96.83%), Postives = 183/189 (96.83%), Query Frame = 0


Query: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGVYNLLSLSDLLDN 60
           MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGV     LSDLLDN
Sbjct: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGV-----LSDLLDN 60

Query: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120
           RKQRILKTIQNSEELR GAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS
Sbjct: 61  RKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120

Query: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180
           KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM
Sbjct: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180

Query: 181 FGTMKEITN 190
           FGTMKEITN
Sbjct: 181 FGTMKEITN 184

[Close]

BLAST of IVF0019308 vs. ExPASy Swiss-Prot
Match: Q09X31 (ATP synthase subunit b, chloroplastic OS=Morus indica OX=248361 GN=atpF PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 3.2e-85
Identity = 167/189 (88.36%), Postives = 178/189 (94.18%), Query Frame = 0


Query: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGVYNLLSLSDLLDN 60
           MKNVTD F+SL YWPSA SFGFNTDILATNPINLSVVLGVLIFFGKGV     LSDLLDN
Sbjct: 1   MKNVTDPFLSLSYWPSAGSFGFNTDILATNPINLSVVLGVLIFFGKGV-----LSDLLDN 60

Query: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120
           RKQRILKTI+NSEELREGA+EQLEKAR+RLRKVE EADQFRVNGYSEIEREKLNLINSTS
Sbjct: 61  RKQRILKTIRNSEELREGALEQLEKARSRLRKVEKEADQFRVNGYSEIEREKLNLINSTS 120

Query: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180
           K+LEQLENYKNETI FEQQ+AIN+VRQ+VFQQAL+GALGTLNSCL+NELHLRTIS NIGM
Sbjct: 121 KTLEQLENYKNETIHFEQQRAINEVRQRVFQQALEGALGTLNSCLNNELHLRTISTNIGM 180

Query: 181 FGTMKEITN 190
           FGTMKEIT+
Sbjct: 181 FGTMKEITD 184

[Close]

BLAST of IVF0019308 vs. ExPASy Swiss-Prot
Match: Q49L12 (ATP synthase subunit b, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=atpF PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 7.1e-85
Identity = 168/189 (88.89%), Postives = 178/189 (94.18%), Query Frame = 0


Query: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGVYNLLSLSDLLDN 60
           MKNVTDSF+SLG+WPSA SFGFNTDILATNPINLSVVLGVLIFFGKGV     LSDLLDN
Sbjct: 1   MKNVTDSFVSLGHWPSAGSFGFNTDILATNPINLSVVLGVLIFFGKGV-----LSDLLDN 60

Query: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120
           RKQRIL TI+NSEELR GAIEQLEKARARLRKVEMEA+QFRVNGYSEIE+EKLNLINST 
Sbjct: 61  RKQRILNTIRNSEELRGGAIEQLEKARARLRKVEMEAEQFRVNGYSEIEQEKLNLINSTY 120

Query: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180
           K+LEQLENYKNETI FEQQ+AINQVRQ+VFQQALQGALGTLNSCL+NELHLRTISANIGM
Sbjct: 121 KTLEQLENYKNETIHFEQQRAINQVRQRVFQQALQGALGTLNSCLNNELHLRTISANIGM 180

Query: 181 FGTMKEITN 190
           FG MKEIT+
Sbjct: 181 FGAMKEITD 184

[Close]

BLAST of IVF0019308 vs. ExPASy Swiss-Prot
Match: Q8S8Y2 (ATP synthase subunit b, chloroplastic OS=Atropa belladonna OX=33113 GN=atpF PE=3 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.2e-84
Identity = 167/189 (88.36%), Postives = 179/189 (94.71%), Query Frame = 0


Query: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGVYNLLSLSDLLDN 60
           MKNVTDSF+SLG+WPSA SFGFNTDILATNPINLSVVLGVLIFFGKGV     LSDLLDN
Sbjct: 1   MKNVTDSFVSLGHWPSAGSFGFNTDILATNPINLSVVLGVLIFFGKGV-----LSDLLDN 60

Query: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120
           RKQRIL TI+NSEELREGAIEQLEKAR+RLRKVE EA+QFRVNGYSEIEREKLNLINST 
Sbjct: 61  RKQRILNTIRNSEELREGAIEQLEKARSRLRKVETEAEQFRVNGYSEIEREKLNLINSTY 120

Query: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180
           K+LEQLENYKNETI+FEQQ+AINQVRQ+VFQQAL+GALGTLNSCL+NELHLRTISANIGM
Sbjct: 121 KTLEQLENYKNETIQFEQQRAINQVRQRVFQQALRGALGTLNSCLNNELHLRTISANIGM 180

Query: 181 FGTMKEITN 190
            GTMKEIT+
Sbjct: 181 LGTMKEITD 184

[Close]

BLAST of IVF0019308 vs. ExPASy Swiss-Prot
Match: Q14FH1 (ATP synthase subunit b, chloroplastic OS=Populus alba OX=43335 GN=atpF PE=3 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.2e-84
Identity = 168/189 (88.89%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGVYNLLSLSDLLDN 60
           MKN+TDSF+SLG+W SA SFGFNTDILATNPINLSVVLGVLIFFGKGV     LSDLLDN
Sbjct: 1   MKNITDSFVSLGHWSSAGSFGFNTDILATNPINLSVVLGVLIFFGKGV-----LSDLLDN 60

Query: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120
           RKQRIL TI+NSEELR GAIEQLEKARARLRKVE+EADQFRVNGYSEIEREKLNLINST 
Sbjct: 61  RKQRILNTIRNSEELRGGAIEQLEKARARLRKVEIEADQFRVNGYSEIEREKLNLINSTY 120

Query: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180
           K+LEQLENYKNETI FEQQ+AINQVRQ+VFQQALQGALGTLNSCL NELHLRTISANIGM
Sbjct: 121 KTLEQLENYKNETIHFEQQRAINQVRQRVFQQALQGALGTLNSCLTNELHLRTISANIGM 180

Query: 181 FGTMKEITN 190
           FG MKEITN
Sbjct: 181 FGAMKEITN 184

[Close]

BLAST of IVF0019308 vs. ExPASy TrEMBL
Match: A0A513X1C2 (ATP synthase subunit b, chloroplastic OS=Cucumis sativus OX=3659 GN=atpF PE=3 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.3e-94
Identity = 188/189 (99.47%), Postives = 188/189 (99.47%), Query Frame = 0


Query: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGVYNLLSLSDLLDN 60
           MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGVYNLLSLSDLLDN
Sbjct: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGVYNLLSLSDLLDN 60

Query: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120
           RKQRILKTIQNSEELR GAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS
Sbjct: 61  RKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120

Query: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180
           KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM
Sbjct: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180

Query: 181 FGTMKEITN 190
           FGTMKEITN
Sbjct: 181 FGTMKEITN 189

[Close]

BLAST of IVF0019308 vs. ExPASy TrEMBL
Match: A0A6M8YGS6 (ATP synthase subunit b, chloroplastic OS=Cucumis melo subsp. agrestis OX=217619 GN=atpF PE=3 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 9.0e-91
Identity = 184/189 (97.35%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGVYNLLSLSDLLDN 60
           MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGV     LSDLLDN
Sbjct: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGV-----LSDLLDN 60

Query: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120
           RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS
Sbjct: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120

Query: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180
           KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM
Sbjct: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180

Query: 181 FGTMKEITN 190
           FGTMKEITN
Sbjct: 181 FGTMKEITN 184

[Close]

BLAST of IVF0019308 vs. ExPASy TrEMBL
Match: G3ETX1 (ATP synthase subunit b, chloroplastic OS=Cucumis melo subsp. melo OX=412675 GN=atpF PE=3 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 9.0e-91
Identity = 184/189 (97.35%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGVYNLLSLSDLLDN 60
           MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGV     LSDLLDN
Sbjct: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGV-----LSDLLDN 60

Query: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120
           RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS
Sbjct: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120

Query: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180
           KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM
Sbjct: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180

Query: 181 FGTMKEITN 190
           FGTMKEITN
Sbjct: 181 FGTMKEITN 184

[Close]

BLAST of IVF0019308 vs. ExPASy TrEMBL
Match: A0A1S4ETZ5 (ATP synthase subunit b, chloroplastic OS=Cucumis melo OX=3656 GN=atpF PE=3 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 9.0e-91
Identity = 184/189 (97.35%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGVYNLLSLSDLLDN 60
           MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGV     LSDLLDN
Sbjct: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGV-----LSDLLDN 60

Query: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120
           RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS
Sbjct: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120

Query: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180
           KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM
Sbjct: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180

Query: 181 FGTMKEITN 190
           FGTMKEITN
Sbjct: 181 FGTMKEITN 184

[Close]

BLAST of IVF0019308 vs. ExPASy TrEMBL
Match: A0A249RZG2 (ATP synthase subunit b, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=atpF PE=3 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.0e-90
Identity = 183/189 (96.83%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGVYNLLSLSDLLDN 60
           MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGV     +SDLLDN
Sbjct: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGV----CVSDLLDN 60

Query: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120
           RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS
Sbjct: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120

Query: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180
           KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM
Sbjct: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180

Query: 181 FGTMKEITN 190
           FGTMKEITN
Sbjct: 181 FGTMKEITN 185

[Close]

BLAST of IVF0019308 vs. NCBI nr
Match: QDH07731.1 (AtpF [Cucumis sativus])

HSP 1 Score: 349 bits (896), Expect = 7.48e-121
Identity = 188/189 (99.47%), Postives = 188/189 (99.47%), Query Frame = 0


Query: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGVYNLLSLSDLLDN 60
           MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGVYNLLSLSDLLDN
Sbjct: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGVYNLLSLSDLLDN 60

Query: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120
           RKQRILKTIQNSEELR GAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS
Sbjct: 61  RKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120

Query: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180
           KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM
Sbjct: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180

Query: 181 FGTMKEITN 189
           FGTMKEITN
Sbjct: 181 FGTMKEITN 189

[Close]

BLAST of IVF0019308 vs. NCBI nr
Match: YP_004841769.1 (ATP synthase CF0 subunit I [Cucumis melo subsp. melo] >YP_009860059.1 ATP synthase CF0 subunit I [Cucumis melo subsp. agrestis] >AEM76878.1 ATP synthase CF0 subunit I [Cucumis melo subsp. melo] >QKK36642.1 ATP synthase CF0 subunit I [Cucumis melo subsp. agrestis] >QRW36541.1 ATPase subunit I [Cucumis melo])

HSP 1 Score: 337 bits (864), Expect = 4.74e-116
Identity = 184/189 (97.35%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGVYNLLSLSDLLDN 60
           MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGV     LSDLLDN
Sbjct: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGV-----LSDLLDN 60

Query: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120
           RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS
Sbjct: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120

Query: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180
           KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM
Sbjct: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180

Query: 181 FGTMKEITN 189
           FGTMKEITN
Sbjct: 181 FGTMKEITN 184

[Close]

BLAST of IVF0019308 vs. NCBI nr
Match: ASY96331.1 (ATP synthase CF0 B subunit [Cucumis melo subsp. agrestis] >ASY96592.1 ATP synthase CF0 B subunit [Cucumis melo var. conomon] >ASY96679.1 ATP synthase CF0 B subunit [Cucumis melo var. makuwa] >ASY96766.1 ATP synthase CF0 B subunit [Cucumis melo var. momordica] >ASY96853.1 ATP synthase CF0 B subunit [Cucumis melo var. dudaim] >ASY96940.1 ATP synthase CF0 B subunit [Cucumis melo var. cantalupo] >ASY97114.1 ATP synthase CF0 B subunit [Cucumis melo var. inodorus] >ASY97288.1 ATP synthase CF0 B subunit [Cucumis melo var. flexuosus] >QJF46369.1 ATP synthase CF0 B subunit [Cucumis melo])

HSP 1 Score: 336 bits (861), Expect = 1.41e-115
Identity = 183/189 (96.83%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGVYNLLSLSDLLDN 60
           MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGV     +SDLLDN
Sbjct: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGV----CVSDLLDN 60

Query: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120
           RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS
Sbjct: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120

Query: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180
           KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM
Sbjct: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180

Query: 181 FGTMKEITN 189
           FGTMKEITN
Sbjct: 181 FGTMKEITN 185

[Close]

BLAST of IVF0019308 vs. NCBI nr
Match: YP_009752482.1 (CF0 subunit I [Trichosanthes tubiflora] >QIT04878.1 CF0 subunit I [Trichosanthes tubiflora])

HSP 1 Score: 335 bits (858), Expect = 3.90e-115
Identity = 182/189 (96.30%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGVYNLLSLSDLLDN 60
           MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGV     LSDLLDN
Sbjct: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGV-----LSDLLDN 60

Query: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120
           RKQRILKTIQNSE+LREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS
Sbjct: 61  RKQRILKTIQNSEDLREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120

Query: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180
           KSLEQLENYKNETIRFEQQ+AINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM
Sbjct: 121 KSLEQLENYKNETIRFEQQRAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180

Query: 181 FGTMKEITN 189
           FGTMKEITN
Sbjct: 181 FGTMKEITN 184

[Close]

BLAST of IVF0019308 vs. NCBI nr
Match: YP_009317372.1 (ATP synthase CF0 B subunit [Coccinia grandis] >YP_009346471.1 ATPase subunit I [Cucumis x hytivus] >YP_009752061.1 CF0 subunit I [Dendrosicyos socotranus] >YP_009752313.1 CF0 subunit I [Bryonia marmorata] >YP_010131080.1 ATP synthase CF0 subunit I [Benincasa hispida] >YP_247585.1 ATP synthase CF0 B subunit [Cucumis sativus] >Q4VZP7.1 RecName: Full=ATP synthase subunit b, chloroplastic; AltName: Full=ATP synthase F(0) sector subunit b; AltName: Full=ATPase subunit I [Cucumis sativus] >AHM88694.1 ATP synthase CF0 subunit I [Lagenaria siceraria] >ALF03287.1 ATP synthase CF0 B subunit [Cucumis sativus var. hardwickii] >AVE15317.1 AtpF [Cucumis sativus var. sativus] >QCY72828.1 AtpF [Cucumis hystrix] >QZL38667.1 CF0 subunit I [Citrullus ecirrhosus])

HSP 1 Score: 334 bits (857), Expect = 5.53e-115
Identity = 183/189 (96.83%), Postives = 183/189 (96.83%), Query Frame = 0


Query: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGVYNLLSLSDLLDN 60
           MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGV     LSDLLDN
Sbjct: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGV-----LSDLLDN 60

Query: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120
           RKQRILKTIQNSEELR GAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS
Sbjct: 61  RKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120

Query: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180
           KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM
Sbjct: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180

Query: 181 FGTMKEITN 189
           FGTMKEITN
Sbjct: 181 FGTMKEITN 184

[Close]

BLAST of IVF0019308 vs. TAIR 10
Match: ATCG00130.1 (ATPase, F0 complex, subunit B/B', bacterial/chloroplast )

HSP 1 Score: 300.1 bits (767), Expect = 1.3e-81
Identity = 158/189 (83.60%), Postives = 173/189 (91.53%), Query Frame = 0


Query: 1   MKNVTDSFISLGYWPSAESFGFNTDILATNPINLSVVLGVLIFFGKGVYNLLSLSDLLDN 60
           MKN+TDSF+ LG+WPSA SFGFNTDILATNPINLSVV GVLIFFGKGV     L+DLLDN
Sbjct: 1   MKNLTDSFVYLGHWPSAGSFGFNTDILATNPINLSVVFGVLIFFGKGV-----LNDLLDN 60

Query: 61  RKQRILKTIQNSEELREGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTS 120
           RKQRIL TI+NSEELREGAI+QLE ARARLR VE EAD+FRVNGYSEIEREKLNLINST 
Sbjct: 61  RKQRILNTIRNSEELREGAIQQLENARARLRNVETEADKFRVNGYSEIEREKLNLINSTY 120

Query: 121 KSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGM 180
           K+L+QLENYKNETI FEQQ+ INQVR++VFQQALQGA+GTLNSCL NELHLRTI+ANIGM
Sbjct: 121 KTLKQLENYKNETILFEQQRTINQVRERVFQQALQGAIGTLNSCLSNELHLRTINANIGM 180

Query: 181 FGTMKEITN 190
           FGTMKEIT+
Sbjct: 181 FGTMKEITD 184

The following BLAST results are available for this feature:

BLAST of IVF0019308 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZP7	1.6e-92	96.83	ATP synthase subunit b, chloroplastic OS=Cucumis sativus OX=3659 GN=atpF PE=3 SV...	[more]
Q09X31	3.2e-85	88.36	ATP synthase subunit b, chloroplastic OS=Morus indica OX=248361 GN=atpF PE=3 SV=...	[more]
Q49L12	7.1e-85	88.89	ATP synthase subunit b, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=...	[more]
Q8S8Y2	1.2e-84	88.36	ATP synthase subunit b, chloroplastic OS=Atropa belladonna OX=33113 GN=atpF PE=3...	[more]
Q14FH1	1.2e-84	88.89	ATP synthase subunit b, chloroplastic OS=Populus alba OX=43335 GN=atpF PE=3 SV=1	[more]

BLAST of IVF0019308 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A513X1C2	1.3e-94	99.47	ATP synthase subunit b, chloroplastic OS=Cucumis sativus OX=3659 GN=atpF PE=3 SV...	[more]
A0A6M8YGS6	9.0e-91	97.35	ATP synthase subunit b, chloroplastic OS=Cucumis melo subsp. agrestis OX=217619 ...	[more]
G3ETX1	9.0e-91	97.35	ATP synthase subunit b, chloroplastic OS=Cucumis melo subsp. melo OX=412675 GN=a...	[more]
A0A1S4ETZ5	9.0e-91	97.35	ATP synthase subunit b, chloroplastic OS=Cucumis melo OX=3656 GN=atpF PE=3 SV=1	[more]
A0A249RZG2	2.0e-90	96.83	ATP synthase subunit b, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658...	[more]

BLAST of IVF0019308 vs. NCBI nr


Match Name	E-value	Identity	Description
QDH07731.1	7.48e-121	99.47	AtpF [Cucumis sativus]	[more]
YP_004841769.1	4.74e-116	97.35	ATP synthase CF0 subunit I [Cucumis melo subsp. melo] >YP_009860059.1 ATP syntha...	[more]
ASY96331.1	1.41e-115	96.83	ATP synthase CF0 B subunit [Cucumis melo subsp. agrestis] >ASY96592.1 ATP syntha...	[more]
YP_009752482.1	3.90e-115	96.30	CF0 subunit I [Trichosanthes tubiflora] >QIT04878.1 CF0 subunit I [Trichosanthes...	[more]
YP_009317372.1	5.53e-115	96.83	ATP synthase CF0 B subunit [Coccinia grandis] >YP_009346471.1 ATPase subunit I [...	[more]

BLAST of IVF0019308 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00130.1	1.3e-81	83.60	ATPase, F0 complex, subunit B/B', bacterial/chloroplast	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 69..103
None	No IPR available	PANTHER	PTHR34264	ATP SYNTHASE SUBUNIT B, CHLOROPLASTIC	coord: 1..181
None	No IPR available	CDD	cd06503	ATP-synt_Fo_b	coord: 26..157 e-value: 1.24049E-15 score: 67.8479
IPR002146	ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast	PFAM	PF00430	ATP-synt_B	coord: 27..161 e-value: 4.4E-30 score: 104.5
IPR002146	ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast	HAMAP	MF_01398	ATP_synth_b_bprime	coord: 21..163 score: 10.916273

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0019308.2	IVF0019308.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
molecular_function	GO:0015078	proton transmembrane transporter activity