IVF0019301 (gene) Melon (IVF77) v1

Overview


Name	IVF0019301
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	zinc finger CCCH domain-containing protein 25
Location	chr11: 19652874 .. 19655504 (-)
RNA-Seq Expression	IVF0019301
Synteny	IVF0019301

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCCTTTAACCTTAGTCAAACGCATCCAGAAGATCAATTCTCAAGAGGCAGCGCTTGGGATTTCTGAGGAAGCTTCATGGCACGCCAAATACAAAGATTCCGCTTACGTTTTCGTCGGAGGCATTCCTTATGATCTCACTGAGGGTGACCTCCTCGCCGTCTTCGCCCAGTAAGTTCATAATTCTATCTATTTTCTTCCCCTTCGTTGTTTTGATTATGCTCTCTTGCAGCTCTATGTTCGTATTTACTTGATGGATTGTTGCTGGATAAGTTTAGATTGAGATGTTGTGCTAGATTTGTGTGTTCGACATTGAAATTGGTCGTCGTCTTGTTGTTCCTGTAGCTTCTAATTTGGACTTTGCTGGTAGTGACGAAACTTGTTGTTCCTGTAGCTTCTAAATTGGCCTTTGCTGGTAGTGACGAAAATTTATGGGGTGCTGTGTAAGTAGAAGAATTGTTTGTTGGTCGTTGTAAATCGTTTTTAGTCAAAAATCCTAGGTATTTTGAATTGGTAACTTAAGAGGTGGAGTTGATGTTTCAAGTTGTGCAAATAGACTAATTGAGCTCATAGTTGTTAGTCCAATAGATTTTGTTGTTTCTTGTAGTGTCAGCTTTTCCTATTTTAGAATTCATCTTCATTGTGACCTTGGAGGGGCAATTGTATGAGAAGGGTTGGGATGTTTGGAGATACCTCTTTAGGTCCTAGGTTTAAATCTCAGGTGGAAAACTCAGCCCTGATTGGTAATATTTGGTTTTTTGTTTTTGAAAATTAAGTCTATAGACATCCCTAGGAATTGCATCTCTCTCTCCTTGTTTTTTTAGATGTGGTTAAGAACTCAACTCTTTAGCTTAAAAAATATGCAAGTCATGGTAAGAAACTGAGAGTATATAGATTTGGTTTTCAAAAACTAAAACCAAATGGTTACCAAACAGGGCCAAAGGTACTCAAAACTTTTGTTTTTCTCTCCGGAGCCAGCCTTGGTGTGGGGAAGGCCTCTTGGCAACTAGGGGTAGGTTCTATGATAAAGCTAAAACAGCTCTTCGATATCTTGGTTTATGTGTGTGTATAATCACATTTGTTTCAATCAATAAAAGACTCTTTTTCTTCTTCCTTGCCCTTTCACTGTTTAGTTATCTGTAAATGCATTTTTAAGGTTACATGTTCACTTGTGGGTCATTTGCGTTTTTTGAATATTGGAATATATTTGAACGTACAGGTATGGGGAGATTGTAGATGTCAATCTTATCAGAGACAAGGGTACGGGAAAATCAAAAGGCTATGCCTTTGTTGCATATGAAGATCAGAGAAGTACAAATCTTGCTGTAGGTTGTCTCCTTCTCCTCTCTCTAAACCGTTCATTTTTTGTTATATGAGACTGAATGCAGATCTCTAAGTAATGTGGCTTGTCTCTTTCAGATAACTTGAATGGCGCACAGATTCTAGGTCGAATCATTAGGGTTGATCATGTGTCTAAATATAAAAAGAAGGAAGAGGAAGATGAAGAAGAAGAACAAAAAAAGAGGGAAGCTAGGGGTGTTTGTCGTGCCTTTCAAAGGGGTGAATGTACTCGCGGAGCTGGTTGCAAATTCTCCCATGATGAGCAGGTATGTGCTAGACCTGTTATGTAAATTTTCTCTTGGAAGGATAGGAAGGGGTTTTGATCCCTGACAGGTTGTTAGTGGGGAGATGGGATGGTTTGATTTACAGAAAAGGAAGTTTATTGATTTTTGTAGGGGAAATATCTTCGCTTCACGGGATTGTAGTTCATCTTTTACCTTTAATGTTACTAGCTAGTTATGTCTGAATTGAATAAAAGAAGTTTCAAGACTATTTTTTCTTCAGCATGCTTCGGTTAGAGCTTCATTTTAAGAAATTTGATGCATGGAGATTGTTCGTTTTTCAGAGAGCTGCAAACACGGGCTGGGGGGCGGCAGAAGATGCAAGTTCAAAATGGGGGCATGACAAGTTTGACAGTAGAACAAATCACGACAAAGAATTACGTGCAAAAGGAAGGAAAAATAGTGATGACTTAGGAAGACATCCAAGGGAAACTAGTGGGAGTCTGAGGCAGGAAAATAGACCGAAAGGTTGGGATGATAGTAAAGGATCAGAACTCAAGCCGAGAGAGGATCATTGGAGGAGAGATGAGAAGAGATCGAGAAGATATGATCTTGATGGCAATCCTGATCCGAAGTTAGGAGATGATCGTTATAAAAGGGAAGAGAAGAGATCTACAAGGAACCACGAATACGATGATAACAGGAAAGACGAGAAAAGATCGAGAAAACATGACAATGATGAGGAGATGAAATTAGAAGATGATCGCTATAGGAAGGAAGAAAATAGGTATAGAAGGAACCAAGACAATGAACTTCCACAGCATTCGAGAAGAAACTACAACACAAGGGAAGAAGACAGATCATCAAAAAGGCATGGTGACGAAGAGTATCAGCCAAAGTTGGGGGAAGATGATAAAAGAAGGGAAAGAGATATATCAGTACGACATCGCTCAGAATCACACAGGAGGGAAAATCCGAATGAGAAGAGAGATTTTCGGTCCTCTCATGGTGGTAGAGATTCTTCATCACATTCTCATACAGAAAGAAACGAGGACCGTCGTAGATAA

mRNA sequence

ATGAATCCTTTAACCTTAGTCAAACGCATCCAGAAGATCAATTCTCAAGAGGCAGCGCTTGGGATTTCTGAGGAAGCTTCATGGCACGCCAAATACAAAGATTCCGCTTACGTTTTCGTCGGAGGCATTCCTTATGATCTCACTGAGGGTGACCTCCTCGCCGTCTTCGCCCAGTATGGGGAGATTGTAGATGTCAATCTTATCAGAGACAAGGGTACGGGAAAATCAAAAGGCTATGCCTTTGTTGCATATGAAGATCAGAGAAGTACAAATCTTGCTGTAGATAACTTGAATGGCGCACAGATTCTAGGTCGAATCATTAGGGTTGATCATGTGTCTAAATATAAAAAGAAGGAAGAGGAAGATGAAGAAGAAGAACAAAAAAAGAGGGAAGCTAGGGGTGTTTGTCGTGCCTTTCAAAGGGGTGAATGTACTCGCGGAGCTGGTTGCAAATTCTCCCATGATGAGCAGAGAGCTGCAAACACGGGCTGGGGGGCGGCAGAAGATGCAAGTTCAAAATGGGGGCATGACAAGTTTGACAGTAGAACAAATCACGACAAAGAATTACGTGCAAAAGGAAGGAAAAATAGTGATGACTTAGGAAGACATCCAAGGGAAACTAGTGGGAGTCTGAGGCAGGAAAATAGACCGAAAGGTTGGGATGATAGTAAAGGATCAGAACTCAAGCCGAGAGAGGATCATTGGAGGAGAGATGAGAAGAGATCGAGAAGATATGATCTTGATGGCAATCCTGATCCGAAGTTAGGAGATGATCGTTATAAAAGGGAAGAGAAGAGATCTACAAGGAACCACGAATACGATGATAACAGGAAAGACGAGAAAAGATCGAGAAAACATGACAATGATGAGGAGATGAAATTAGAAGATGATCGCTATAGGAAGGAAGAAAATAGGTATAGAAGGAACCAAGACAATGAACTTCCACAGCATTCGAGAAGAAACTACAACACAAGGGAAGAAGACAGATCATCAAAAAGGCATGGTGACGAAGAGTATCAGCCAAAGTTGGGGGAAGATGATAAAAGAAGGGAAAGAGATATATCAGTACGACATCGCTCAGAATCACACAGGAGGGAAAATCCGAATGAGAAGAGAGATTTTCGGTCCTCTCATGGTGGTAGAGATTCTTCATCACATTCTCATACAGAAAGAAACGAGGACCGTCGTAGATAA

Coding sequence (CDS)

ATGAATCCTTTAACCTTAGTCAAACGCATCCAGAAGATCAATTCTCAAGAGGCAGCGCTTGGGATTTCTGAGGAAGCTTCATGGCACGCCAAATACAAAGATTCCGCTTACGTTTTCGTCGGAGGCATTCCTTATGATCTCACTGAGGGTGACCTCCTCGCCGTCTTCGCCCAGTATGGGGAGATTGTAGATGTCAATCTTATCAGAGACAAGGGTACGGGAAAATCAAAAGGCTATGCCTTTGTTGCATATGAAGATCAGAGAAGTACAAATCTTGCTGTAGATAACTTGAATGGCGCACAGATTCTAGGTCGAATCATTAGGGTTGATCATGTGTCTAAATATAAAAAGAAGGAAGAGGAAGATGAAGAAGAAGAACAAAAAAAGAGGGAAGCTAGGGGTGTTTGTCGTGCCTTTCAAAGGGGTGAATGTACTCGCGGAGCTGGTTGCAAATTCTCCCATGATGAGCAGAGAGCTGCAAACACGGGCTGGGGGGCGGCAGAAGATGCAAGTTCAAAATGGGGGCATGACAAGTTTGACAGTAGAACAAATCACGACAAAGAATTACGTGCAAAAGGAAGGAAAAATAGTGATGACTTAGGAAGACATCCAAGGGAAACTAGTGGGAGTCTGAGGCAGGAAAATAGACCGAAAGGTTGGGATGATAGTAAAGGATCAGAACTCAAGCCGAGAGAGGATCATTGGAGGAGAGATGAGAAGAGATCGAGAAGATATGATCTTGATGGCAATCCTGATCCGAAGTTAGGAGATGATCGTTATAAAAGGGAAGAGAAGAGATCTACAAGGAACCACGAATACGATGATAACAGGAAAGACGAGAAAAGATCGAGAAAACATGACAATGATGAGGAGATGAAATTAGAAGATGATCGCTATAGGAAGGAAGAAAATAGGTATAGAAGGAACCAAGACAATGAACTTCCACAGCATTCGAGAAGAAACTACAACACAAGGGAAGAAGACAGATCATCAAAAAGGCATGGTGACGAAGAGTATCAGCCAAAGTTGGGGGAAGATGATAAAAGAAGGGAAAGAGATATATCAGTACGACATCGCTCAGAATCACACAGGAGGGAAAATCCGAATGAGAAGAGAGATTTTCGGTCCTCTCATGGTGGTAGAGATTCTTCATCACATTCTCATACAGAAAGAAACGAGGACCGTCGTAGATAA

Protein sequence

MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEEEDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFDSRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEKRSRRYDLDGNPDPKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDRYRKEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDEEYQPKLGEDDKRRERDISVRHRSESHRRENPNEKRDFRSSHGGRDSSSHSHTERNEDRRR

Homology

[Close]

BLAST of IVF0019301 vs. ExPASy Swiss-Prot
Match: Q10B98 (Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0826400 PE=2 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 5.0e-80
Identity = 181/318 (56.92%), Postives = 224/318 (70.44%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VKR Q IN +EA LGI E+ SWHAK+KDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTQVKRTQVINQKEALLGIGEDGSWHAKFKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           E+VDVNL+RDKGTGKSKG+AF+AYEDQRST LAVDNLNGA++LGRI+RVDHVSKYKKKEE
Sbjct: 61  EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIVRVDHVSKYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDK-F 180
           EDEEE QKKREARGVC AFQ+GEC RGA C++SHDEQR ANTGWG+ E++ ++W HD+  
Sbjct: 121 EDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNANTGWGSKEESKARWEHDRHH 180

Query: 181 DSRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDE 240
           +   +H K   + G +   D  +   +++G   Q +R + + D + S L+    H  R  
Sbjct: 181 EPPMSHKKFPSSAGEQRFPDRAKEENKSTGREGQSSRSEAYKD-RDSRLR----HSDRGS 240

Query: 241 KRSRRYDLDGNPDPKLGD-----DRYK--REEKRSTRNHEYDDNRKDEKRSRKHDNDEEM 300
           K   RY  D +P+   GD     DRY   R+EK      E   +  D+KRSR+ D D   
Sbjct: 241 KDHDRYRHDRSPERSRGDRQRNNDRYAQGRDEKSERYRSEVKHDEGDQKRSRR-DTDSSG 300

Query: 301 KLEDDRYRKEENRYRRNQ 311
             E  R  ++  RYR+++
Sbjct: 301 HYE-RRGNEDSERYRKSR 311

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BLAST of IVF0019301 vs. ExPASy Swiss-Prot
Match: Q9SD61 (Zinc finger CCCH domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=At3g47120 PE=2 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 5.3e-74
Identity = 194/354 (54.80%), Postives = 230/354 (64.97%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VK +QKIN++E+ LGIS+EASWHAKYK+SAYV+VGGIP+DLTEGDLLAVF+QYG
Sbjct: 1   MNPLTQVKNLQKINARESDLGISDEASWHAKYKNSAYVYVGGIPFDLTEGDLLAVFSQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKG+AF+AYEDQRST LAVDNLNGA +LGR I+VDH   YKK EE
Sbjct: 61  EIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGALVLGRTIKVDHCGAYKKHEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDK-- 180
           EDEE  ++ REARGVCRAFQRGECTRG  CKFSHDE+RAANTGWG  ED SSKW HDK  
Sbjct: 121 EDEETRRQNREARGVCRAFQRGECTRGDSCKFSHDEKRAANTGWGHEEDRSSKWDHDKNR 180

Query: 181 ----FDSRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSK-------GSE 240
                       +  R    K S D  R    T+G   +E+R   WD  K       G+ 
Sbjct: 181 EGRGVCRAFQRGECTRGDSCKFSHDEKR--AATTGWGHEEDRSSKWDQDKLNGAKKGGTS 240

Query: 241 LKPREDHWRRDEKRSRRYDLDGNPD---PKLGDDRYKREEKRSTRNHEYDDNRKDEKRSR 300
              R D     E++S R   DG+     PK   +R  RE+        YD   K++KRS 
Sbjct: 241 FGNRGDFKPDVEEKSYRGRGDGDASYGRPK-ERERVDREDMGPRSRDAYD--MKEQKRSG 300

Query: 301 KHDNDEEMKLEDDRYRKEENRYRRNQDNELPQ-HSRRNYNTREE-DRSSKRHGD 337
           ++DN    +  D+     E++  R QD E  +  SRR+ N REE DR S R  D
Sbjct: 301 RYDNAYSRRHNDEIDYVREDKGSRAQDWEKRKAESRRDRNDREEKDRDSLRRED 349

[Close]

BLAST of IVF0019301 vs. ExPASy Swiss-Prot
Match: Q8R0F5 (RNA-binding motif protein, X-linked 2 OS=Mus musculus OX=10090 GN=Rbmx2 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 4.9e-35
Identity = 118/341 (34.60%), Postives = 177/341 (51.91%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VK I ++N +E  LG++E+ SWH++YK SA++FVGG+PY+LTEGD++ VF+QYG
Sbjct: 1   MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKHSAWIFVGGLPYELTEGDIICVFSQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIV++NL+RDK TGKSKG+ F+ YEDQRST LAVDN NG +I GR IRVDHVS Y+  +E
Sbjct: 61  EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
            ++ ++        V R  Q     +G G K         +      EDA     H K  
Sbjct: 121 SEDVDD--------VTRELQE----KGCGVKTPPSSPPEVSED----EDAKLTKKHKKDK 180

Query: 181 SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK 240
                 K+ + +G+  ++      R  +   +++ R      SK SE   + +H  R+ K
Sbjct: 181 KEKKKRKKEKTEGQAQAEQ-PSCSRSATVKEKKDERASRKHSSKTSERAQKSEH--RESK 240

Query: 241 RSRRYDLDGNPD--PKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDR 300
           +S     DG      +  D   K  +++    H+    R+ E++SR+ +          R
Sbjct: 241 KSHSGSPDGRSSYHARAEDPECKARKEKPKHEHKSASRREAEEKSRERERGRSSGTHSGR 300

Query: 301 YR--KEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDE 338
           +R   +   +R    +  P  S R+   R        HG +
Sbjct: 301 HRGHSDGRSHRSRSRSRSPDKSHRHKKYRHSRERDSYHGSD 322

[Close]

BLAST of IVF0019301 vs. ExPASy Swiss-Prot
Match: B0BN49 (RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus OX=10116 GN=Rbmx2 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.1e-34
Identity = 123/352 (34.94%), Postives = 183/352 (51.99%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VK I ++N +E  LG++E+ SWH++YKDSA++F+GG+PY+LTEGD++ VF+QYG
Sbjct: 1   MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIV++NL+RDK TGKSKG+ F+ YEDQRST LAVDN NG +I GR IRVDHV+ Y+  +E
Sbjct: 61  EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVANYRAPQE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
            ++ ++        V R  Q     +G G K         +      EDA       K  
Sbjct: 121 SEDVDD--------VTRELQE----KGCGAKTPPSSPPEVSED----EDA-------KVT 180

Query: 181 SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDD--SKGSELKPREDHWRRD 240
            +   DK+ + K +K  +   R  +    S  +    K  D+  +K    KP E   ++ 
Sbjct: 181 KKPKKDKKEKKK-KKEKEKTERPVQAELPSCSRSKTVKETDEQSAKKHSSKPSE-RAQKS 240

Query: 241 EKRSRRYDLDGNPDPKLG-------------DDRYKREEKRSTRNHEYDDNR-KDEKRSR 300
           E R R+    G+PD +                +++K E K S+R    + +R KD  RS 
Sbjct: 241 ECRERKKSHSGSPDGRTSCRGRAEEPEWEAKKEKHKHEHKPSSRREGEEKSRDKDRGRSS 300

Query: 301 KHDNDEEMKLEDDRYRKEENRYRRNQDNELPQHSRRNYNTREED--RSSKRH 335
              +       + R  +  +R R    +   +H +  Y+   E    S +RH
Sbjct: 301 GTHSSRHHGHSEGRSHRSRSRSRSRSPDRSHRHKKHRYSHERESFHASDRRH 327

[Close]

BLAST of IVF0019301 vs. ExPASy Swiss-Prot
Match: Q9Y388 (RNA-binding motif protein, X-linked 2 OS=Homo sapiens OX=9606 GN=RBMX2 PE=1 SV=2)

HSP 1 Score: 145.2 bits (365), Expect = 1.6e-33
Identity = 115/343 (33.53%), Postives = 177/343 (51.60%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VK I ++N +E  LG++++ SWH++YKDSA++F+GG+PY+LTEGD++ VF+QYG
Sbjct: 1   MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIV++NL+RDK TGKSKG+ F+ YEDQRST LAVDN NG +I GR IRVDHVS Y+  ++
Sbjct: 61  EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
            +E ++        V R  Q   C               A T   +  ++S      K  
Sbjct: 121 SEEIDD--------VTRQLQEKGC--------------GARTPSPSLSESSEDEKPTKKH 180

Query: 181 SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK 240
            +   +K+ + K ++ +D      RE        + P+     +  +  P++   +  E+
Sbjct: 181 KKDKKEKKKKKKEKEKAD------REVQAEQPSSSSPRRKTVKEKDDTGPKKHSSKNSER 240

Query: 241 RSRRYDLDGNPDPKL------GDDRYKREEKRSTRNHEYDDNRKDEKRSRK---HDNDEE 300
             +    +G   PK       G +  +RE K+    HE+  + + E R  K    D    
Sbjct: 241 AQKSEPREGQKLPKSRTAYSGGAEDLERELKKEKPKHEHKSSSRREAREEKTRIRDRGRS 300

Query: 301 MKLEDDRY--RKEENRYR-RNQDNELPQHSRRNYNTREEDRSS 332
                  Y  R E   YR R++  +     +R   +RE + S+
Sbjct: 301 SDAHSSWYNGRSEGRSYRSRSRSRDKSHRHKRARRSRERESSN 315

[Close]

BLAST of IVF0019301 vs. ExPASy TrEMBL
Match: A0A5D3CVY9 (Zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00620 PE=4 SV=1)

HSP 1 Score: 758.1 bits (1956), Expect = 1.9e-215
Identity = 397/397 (100.00%), Postives = 397/397 (100.00%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180

Query: 181 SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK 240
           SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK
Sbjct: 181 SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK 240

Query: 241 RSRRYDLDGNPDPKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDRYR 300
           RSRRYDLDGNPDPKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDRYR
Sbjct: 241 RSRRYDLDGNPDPKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDRYR 300

Query: 301 KEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDEEYQPKLGEDDKRRERDISVRHRS 360
           KEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDEEYQPKLGEDDKRRERDISVRHRS
Sbjct: 301 KEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDEEYQPKLGEDDKRRERDISVRHRS 360

Query: 361 ESHRRENPNEKRDFRSSHGGRDSSSHSHTERNEDRRR 398
           ESHRRENPNEKRDFRSSHGGRDSSSHSHTERNEDRRR
Sbjct: 361 ESHRRENPNEKRDFRSSHGGRDSSSHSHTERNEDRRR 397

[Close]

BLAST of IVF0019301 vs. ExPASy TrEMBL
Match: A0A0A0KZW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308540 PE=4 SV=1)

HSP 1 Score: 690.3 bits (1780), Expect = 4.8e-195
Identity = 367/397 (92.44%), Postives = 381/397 (95.97%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRI+RVDHVSKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAA+TGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180

Query: 181 SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK 240
           SR NHDKEL AKGRK SD+LGRHPRETSGSLRQENRP+GWDDSK SELK REDH  +DEK
Sbjct: 181 SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDHGGKDEK 240

Query: 241 RSRRYDLDGNPDPKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDRYR 300
           RSRRYDLDGN DPK GDD+YK EEKRS+RNH  DDNRKDEKRSRKHDND+EMKLEDDRYR
Sbjct: 241 RSRRYDLDGNSDPKSGDDQYKGEEKRSSRNH--DDNRKDEKRSRKHDNDDEMKLEDDRYR 300

Query: 301 KEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDEEYQPKLGEDDKRRERDISVRHRS 360
           KEENRYRRNQDNELPQHSRR+Y TREEDRSSKRHGD+EY PKL EDDKRRERD+SVRHRS
Sbjct: 301 KEENRYRRNQDNELPQHSRRDYKTREEDRSSKRHGDKEYPPKLREDDKRRERDVSVRHRS 360

Query: 361 ESHRRENPNEKRDFRSSHGGRDSSSHSHTERNEDRRR 398
           ES+RRENP+EKRD+RSSHGGRDSSSHSH ERNEDRRR
Sbjct: 361 ESYRRENPDEKRDYRSSHGGRDSSSHSHRERNEDRRR 395

[Close]

BLAST of IVF0019301 vs. ExPASy TrEMBL
Match: A0A5A7TUW9 (Zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G00260 PE=4 SV=1)

HSP 1 Score: 669.5 bits (1726), Expect = 8.9e-189
Identity = 361/397 (90.93%), Postives = 372/397 (93.70%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRI+RVDH SKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEEE+QKKREARGVCRAFQRGECTRGAGCKFSHDEQRAA+TGWG AEDASSKWGHDKFD
Sbjct: 121 EDEEEQQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFD 180

Query: 181 SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK 240
            R N +KELRAKGRKNSD+LGRHPRETSGSLRQENR KG DDSK SELK REDH  +DEK
Sbjct: 181 GRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEK 240

Query: 241 RSRRYDLDGNPDPKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDRYR 300
           RSRRYDLDGNPDPK GDD YKREEKRS RNH  DDNRKDEKRSRKHD+D+EMK EDDRYR
Sbjct: 241 RSRRYDLDGNPDPKSGDDHYKREEKRSRRNH--DDNRKDEKRSRKHDDDDEMKSEDDRYR 300

Query: 301 KEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDEEYQPKLGEDDKRRERDISVRHRS 360
           KEENRYRRNQDNELPQHSRR+YNTREEDRSSKRHGD EY PKL EDDKRRERDISVRHRS
Sbjct: 301 KEENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRS 360

Query: 361 ESHRRENPNEKRDFRSSHGGRDSSSHSHTERNEDRRR 398
           ESHRRENP+EKRD+ SS GGRDSSSHSH ERNED  R
Sbjct: 361 ESHRRENPDEKRDYWSSQGGRDSSSHSHRERNEDCHR 395

[Close]

BLAST of IVF0019301 vs. ExPASy TrEMBL
Match: A0A1S3BLJ3 (zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491164 PE=4 SV=1)

HSP 1 Score: 669.5 bits (1726), Expect = 8.9e-189
Identity = 361/397 (90.93%), Postives = 372/397 (93.70%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRI+RVDH SKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEEE+QKKREARGVCRAFQRGECTRGAGCKFSHDEQRAA+TGWG AEDASSKWGHDKFD
Sbjct: 121 EDEEEQQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFD 180

Query: 181 SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK 240
            R N +KELRAKGRKNSD+LGRHPRETSGSLRQENR KG DDSK SELK REDH  +DEK
Sbjct: 181 GRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEK 240

Query: 241 RSRRYDLDGNPDPKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDRYR 300
           RSRRYDLDGNPDPK GDD YKREEKRS RNH  DDNRKDEKRSRKHD+D+EMK EDDRYR
Sbjct: 241 RSRRYDLDGNPDPKSGDDHYKREEKRSRRNH--DDNRKDEKRSRKHDDDDEMKSEDDRYR 300

Query: 301 KEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDEEYQPKLGEDDKRRERDISVRHRS 360
           KEENRYRRNQDNELPQHSRR+YNTREEDRSSKRHGD EY PKL EDDKRRERDISVRHRS
Sbjct: 301 KEENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRS 360

Query: 361 ESHRRENPNEKRDFRSSHGGRDSSSHSHTERNEDRRR 398
           ESHRRENP+EKRD+ SS GGRDSSSHSH ERNED  R
Sbjct: 361 ESHRRENPDEKRDYWSSQGGRDSSSHSHRERNEDCHR 395

[Close]

BLAST of IVF0019301 vs. ExPASy TrEMBL
Match: A0A1S3BLK5 (zinc finger CCCH domain-containing protein 25-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491164 PE=4 SV=1)

HSP 1 Score: 666.4 bits (1718), Expect = 7.5e-188
Identity = 358/392 (91.33%), Postives = 369/392 (94.13%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRI+RVDH SKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEEE+QKKREARGVCRAFQRGECTRGAGCKFSHDEQRAA+TGWG AEDASSKWGHDKFD
Sbjct: 121 EDEEEQQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFD 180

Query: 181 SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK 240
            R N +KELRAKGRKNSD+LGRHPRETSGSLRQENR KG DDSK SELK REDH  +DEK
Sbjct: 181 GRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEK 240

Query: 241 RSRRYDLDGNPDPKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDRYR 300
           RSRRYDLDGNPDPK GDD YKREEKRS RNH  DDNRKDEKRSRKHD+D+EMK EDDRYR
Sbjct: 241 RSRRYDLDGNPDPKSGDDHYKREEKRSRRNH--DDNRKDEKRSRKHDDDDEMKSEDDRYR 300

Query: 301 KEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDEEYQPKLGEDDKRRERDISVRHRS 360
           KEENRYRRNQDNELPQHSRR+YNTREEDRSSKRHGD EY PKL EDDKRRERDISVRHRS
Sbjct: 301 KEENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRS 360

Query: 361 ESHRRENPNEKRDFRSSHGGRDSSSHSHTERN 393
           ESHRRENP+EKRD+ SS GGRDSSSHSH ERN
Sbjct: 361 ESHRRENPDEKRDYWSSQGGRDSSSHSHRERN 390

[Close]

BLAST of IVF0019301 vs. NCBI nr
Match: TYK15418.1 (zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 757 bits (1954), Expect = 3.79e-275
Identity = 397/397 (100.00%), Postives = 397/397 (100.00%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180

Query: 181 SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK 240
           SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK
Sbjct: 181 SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK 240

Query: 241 RSRRYDLDGNPDPKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDRYR 300
           RSRRYDLDGNPDPKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDRYR
Sbjct: 241 RSRRYDLDGNPDPKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDRYR 300

Query: 301 KEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDEEYQPKLGEDDKRRERDISVRHRS 360
           KEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDEEYQPKLGEDDKRRERDISVRHRS
Sbjct: 301 KEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDEEYQPKLGEDDKRRERDISVRHRS 360

Query: 361 ESHRRENPNEKRDFRSSHGGRDSSSHSHTERNEDRRR 397
           ESHRRENPNEKRDFRSSHGGRDSSSHSHTERNEDRRR
Sbjct: 361 ESHRRENPNEKRDFRSSHGGRDSSSHSHTERNEDRRR 397

[Close]

BLAST of IVF0019301 vs. NCBI nr
Match: XP_004147921.1 (zinc finger CCCH domain-containing protein 25 [Cucumis sativus] >KGN54364.1 hypothetical protein Csa_018037 [Cucumis sativus])

HSP 1 Score: 689 bits (1779), Expect = 1.62e-248
Identity = 367/397 (92.44%), Postives = 381/397 (95.97%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRI+RVDHVSKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAA+TGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180

Query: 181 SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK 240
           SR NHDKEL AKGRK SD+LGRHPRETSGSLRQENRP+GWDDSK SELK REDH  +DEK
Sbjct: 181 SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDHGGKDEK 240

Query: 241 RSRRYDLDGNPDPKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDRYR 300
           RSRRYDLDGN DPK GDD+YK EEKRS+RNH  DDNRKDEKRSRKHDND+EMKLEDDRYR
Sbjct: 241 RSRRYDLDGNSDPKSGDDQYKGEEKRSSRNH--DDNRKDEKRSRKHDNDDEMKLEDDRYR 300

Query: 301 KEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDEEYQPKLGEDDKRRERDISVRHRS 360
           KEENRYRRNQDNELPQHSRR+Y TREEDRSSKRHGD+EY PKL EDDKRRERD+SVRHRS
Sbjct: 301 KEENRYRRNQDNELPQHSRRDYKTREEDRSSKRHGDKEYPPKLREDDKRRERDVSVRHRS 360

Query: 361 ESHRRENPNEKRDFRSSHGGRDSSSHSHTERNEDRRR 397
           ES+RRENP+EKRD+RSSHGGRDSSSHSH ERNEDRRR
Sbjct: 361 ESYRRENPDEKRDYRSSHGGRDSSSHSHRERNEDRRR 395

[Close]

BLAST of IVF0019301 vs. NCBI nr
Match: XP_008449221.1 (PREDICTED: zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo] >KAA0045039.1 zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 669 bits (1726), Expect = 1.92e-240
Identity = 360/394 (91.37%), Postives = 371/394 (94.16%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRI+RVDH SKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEEE+QKKREARGVCRAFQRGECTRGAGCKFSHDEQRAA+TGWG AEDASSKWGHDKFD
Sbjct: 121 EDEEEQQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFD 180

Query: 181 SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK 240
            R N +KELRAKGRKNSD+LGRHPRETSGSLRQENR KG DDSK SELK REDH  +DEK
Sbjct: 181 GRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEK 240

Query: 241 RSRRYDLDGNPDPKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDRYR 300
           RSRRYDLDGNPDPK GDD YKREEKRS RNH  DDNRKDEKRSRKHD+D+EMK EDDRYR
Sbjct: 241 RSRRYDLDGNPDPKSGDDHYKREEKRSRRNH--DDNRKDEKRSRKHDDDDEMKSEDDRYR 300

Query: 301 KEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDEEYQPKLGEDDKRRERDISVRHRS 360
           KEENRYRRNQDNELPQHSRR+YNTREEDRSSKRHGD EY PKL EDDKRRERDISVRHRS
Sbjct: 301 KEENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRS 360

Query: 361 ESHRRENPNEKRDFRSSHGGRDSSSHSHTERNED 394
           ESHRRENP+EKRD+ SS GGRDSSSHSH ERNED
Sbjct: 361 ESHRRENPDEKRDYWSSQGGRDSSSHSHRERNED 392

[Close]

BLAST of IVF0019301 vs. NCBI nr
Match: XP_008449231.1 (PREDICTED: zinc finger CCCH domain-containing protein 25-like isoform X2 [Cucumis melo])

HSP 1 Score: 665 bits (1717), Expect = 4.04e-239
Identity = 358/392 (91.33%), Postives = 369/392 (94.13%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRI+RVDH SKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEEE+QKKREARGVCRAFQRGECTRGAGCKFSHDEQRAA+TGWG AEDASSKWGHDKFD
Sbjct: 121 EDEEEQQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFD 180

Query: 181 SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK 240
            R N +KELRAKGRKNSD+LGRHPRETSGSLRQENR KG DDSK SELK REDH  +DEK
Sbjct: 181 GRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEK 240

Query: 241 RSRRYDLDGNPDPKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDRYR 300
           RSRRYDLDGNPDPK GDD YKREEKRS RNH  DDNRKDEKRSRKHD+D+EMK EDDRYR
Sbjct: 241 RSRRYDLDGNPDPKSGDDHYKREEKRSRRNH--DDNRKDEKRSRKHDDDDEMKSEDDRYR 300

Query: 301 KEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDEEYQPKLGEDDKRRERDISVRHRS 360
           KEENRYRRNQDNELPQHSRR+YNTREEDRSSKRHGD EY PKL EDDKRRERDISVRHRS
Sbjct: 301 KEENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRS 360

Query: 361 ESHRRENPNEKRDFRSSHGGRDSSSHSHTERN 392
           ESHRRENP+EKRD+ SS GGRDSSSHSH ERN
Sbjct: 361 ESHRRENPDEKRDYWSSQGGRDSSSHSHRERN 390

[Close]

BLAST of IVF0019301 vs. NCBI nr
Match: XP_008464049.2 (PREDICTED: zinc finger CCCH domain-containing protein 25 [Cucumis melo])

HSP 1 Score: 664 bits (1712), Expect = 3.26e-238
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180

Query: 181 SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK 240
           SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK
Sbjct: 181 SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK 240

Query: 241 RSRRYDLDGNPDPKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDRYR 300
           RSRRYDLDGNPDPKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDRYR
Sbjct: 241 RSRRYDLDGNPDPKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDRYR 300

Query: 301 KEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDEEYQPKLG 344
           KEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDEEYQPKLG
Sbjct: 301 KEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDEEYQPKLG 344

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BLAST of IVF0019301 vs. TAIR 10
Match: AT3G47120.1 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 279.6 bits (714), Expect = 3.8e-75
Identity = 194/354 (54.80%), Postives = 230/354 (64.97%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VK +QKIN++E+ LGIS+EASWHAKYK+SAYV+VGGIP+DLTEGDLLAVF+QYG
Sbjct: 1   MNPLTQVKNLQKINARESDLGISDEASWHAKYKNSAYVYVGGIPFDLTEGDLLAVFSQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKG+AF+AYEDQRST LAVDNLNGA +LGR I+VDH   YKK EE
Sbjct: 61  EIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGALVLGRTIKVDHCGAYKKHEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDK-- 180
           EDEE  ++ REARGVCRAFQRGECTRG  CKFSHDE+RAANTGWG  ED SSKW HDK  
Sbjct: 121 EDEETRRQNREARGVCRAFQRGECTRGDSCKFSHDEKRAANTGWGHEEDRSSKWDHDKNR 180

Query: 181 ----FDSRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSK-------GSE 240
                       +  R    K S D  R    T+G   +E+R   WD  K       G+ 
Sbjct: 181 EGRGVCRAFQRGECTRGDSCKFSHDEKR--AATTGWGHEEDRSSKWDQDKLNGAKKGGTS 240

Query: 241 LKPREDHWRRDEKRSRRYDLDGNPD---PKLGDDRYKREEKRSTRNHEYDDNRKDEKRSR 300
              R D     E++S R   DG+     PK   +R  RE+        YD   K++KRS 
Sbjct: 241 FGNRGDFKPDVEEKSYRGRGDGDASYGRPK-ERERVDREDMGPRSRDAYD--MKEQKRSG 300

Query: 301 KHDNDEEMKLEDDRYRKEENRYRRNQDNELPQ-HSRRNYNTREE-DRSSKRHGD 337
           ++DN    +  D+     E++  R QD E  +  SRR+ N REE DR S R  D
Sbjct: 301 RYDNAYSRRHNDEIDYVREDKGSRAQDWEKRKAESRRDRNDREEKDRDSLRRED 349

The following BLAST results are available for this feature:

BLAST of IVF0019301 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q10B98	5.0e-80	56.92	Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa subsp. japonica OX...	[more]
Q9SD61	5.3e-74	54.80	Zinc finger CCCH domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q8R0F5	4.9e-35	34.60	RNA-binding motif protein, X-linked 2 OS=Mus musculus OX=10090 GN=Rbmx2 PE=1 SV=...	[more]
B0BN49	4.1e-34	34.94	RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus OX=10116 GN=Rbmx2 PE=...	[more]
Q9Y388	1.6e-33	33.53	RNA-binding motif protein, X-linked 2 OS=Homo sapiens OX=9606 GN=RBMX2 PE=1 SV=2	[more]

BLAST of IVF0019301 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CVY9	1.9e-215	100.00	Zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo va...	[more]
A0A0A0KZW7	4.8e-195	92.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308540 PE=4 SV=1	[more]
A0A5A7TUW9	8.9e-189	90.93	Zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo va...	[more]
A0A1S3BLJ3	8.9e-189	90.93	zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo OX...	[more]
A0A1S3BLK5	7.5e-188	91.33	zinc finger CCCH domain-containing protein 25-like isoform X2 OS=Cucumis melo OX...	[more]

BLAST of IVF0019301 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK15418.1	3.79e-275	100.00	zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo var....	[more]
XP_004147921.1	1.62e-248	92.44	zinc finger CCCH domain-containing protein 25 [Cucumis sativus] >KGN54364.1 hypo...	[more]
XP_008449221.1	1.92e-240	91.37	PREDICTED: zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumi...	[more]
XP_008449231.1	4.04e-239	91.33	PREDICTED: zinc finger CCCH domain-containing protein 25-like isoform X2 [Cucumi...	[more]
XP_008464049.2	3.26e-238	100.00	PREDICTED: zinc finger CCCH domain-containing protein 25 [Cucumis melo]	[more]

BLAST of IVF0019301 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47120.1	3.8e-75	54.80	RNA recognition motif (RRM)-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 115..135
None	No IPR available	GENE3D	4.10.1000.10		coord: 118..198 e-value: 1.4E-7 score: 33.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..397
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..397
None	No IPR available	PANTHER	PTHR45880:SF1	RNA-BINDING MOTIF PROTEIN, X-LINKED 2	coord: 1..311
None	No IPR available	PANTHER	PTHR45880	RNA-BINDING MOTIF PROTEIN, X-LINKED 2	coord: 1..311
None	No IPR available	CDD	cd12411	RRM_ist3_like	coord: 27..113 e-value: 6.5552E-58 score: 182.068
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 132..156 e-value: 0.001 score: 28.3
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 135..155 e-value: 7.9E-5 score: 22.5
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 130..157 score: 14.802481
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 37..110 e-value: 1.8E-26 score: 103.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 38..107 e-value: 2.1E-21 score: 75.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 36..114 score: 19.979433
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 5..111 e-value: 6.9E-28 score: 99.4
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 27..115
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 133..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0019301.2	IVF0019301.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071011	precatalytic spliceosome
cellular_component	GO:0005686	U2 snRNP
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding