IVF0019174 (gene) Melon (IVF77) v1

Overview
NameIVF0019174
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprotein ABCI7, chloroplastic-like
Locationchr04: 625420 .. 627525 (-)
RNA-Seq ExpressionIVF0019174
SyntenyIVF0019174
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCTTCCGAGAGATGGCGAAGAGGGTGCCTGTGTTTGTTGATGGGAAGTTCGTGAAGGATTTGTTTTGGTCTATTTATGGCGCTAAAGCTCCAGCTTTTTATGTTCCTGCTAGATTATCCAATCCATTTTAGTTATCTTTTCTATCAATGTGGGAGTGGAGAGTTCGAAGGAAATGGCTGTTCGAATCCTAGATCGTTGGTTTCGGTGGAAAATGGAGCGGAGATTCAAATCATTGAGAAGTTTTTGAGTGGGGATGGGGGTAATTCCTATTGGGCAAATCTAAATCTTGTTTTGGAGTTAGTTATTGGAAGTGGAGGTGAGGTTAAACATTCTTATATTCCGAATCAGTCTTTAAATGCTTCACATATCAAATGGACTTCTGTTCTGCAGGTACTCTCTCCTTTTCGGTTATTTAATTTTGTTGGTAGTTTTGGTGACCTGTTTCTGGCTGCTCTACACCTTCATTATGCTCATATGTTTATCTTATGTTGGGAATGTGACCAAACATGAAAAAGAGAGTACCTGCCAGATAAGATTAACTGTATATTAGTGAGGACAACTAGATTTTAAGTTAAGCCTAGTTTGGTACCGTTTTAGTCTTTGGTTCTGAGATTCTTTGTTTTGTTATTGTTGTTTTAGGAATTTGGAAAGAATTCAAATCTTTTTGGGAAGATGAAAACATATGTGAGAAAATAAACATAATTTTCAAAAACCAAAGTTATGTTGACAGTAGATATTGAAATCAGGAGTGTAAGGTGTGTATTTTCCATTTTTTACTACCTGTCTTGAGAACCTTCCCAATGTAGGATTCACTTTGATGGTTTATGTGGATTTTTCTTTGGAAGCATCTTTTTGAAGTAACTATGGAAATCAAGTGCAAACCAGTTGTCATAGTACAATTTTGTTGAAGATATAGGTCTTTCAATTGTTTTAGTTGTTTTTCCTCCCCATATGTAAAAGGTTCTAGTACTTCTTTTAAGCTAGAAACTTATGGGTCTAAGCTAGCTTGAAAGAATTCCTAGAGCTTATGGATCTAAGCTGCAAGCTAGCAGTTTGTGGGGCTGTTTTTTGTTCGTTATTGTATTCTTTCGATATAAAACTCTTACTAAATTAACTCTAACATTTTAACTCTCACGTATTTTTCTAACTCTCGTAAATTAATTTACATTTAATTTATTTATTTAAAACATGTTTAATTTTCAACAAGGAAGTGACTTTTTCATAAAAGAAAAAGATAGCTAACAGCTCATGGGACTAGCCAGTATGTCACGCACGGTCTCGGACTAGTAGCTTATGAGTCATAAGCCTCTTCCTTCTTTCAGGCTAAGGCTGATGTTGCCTGTTTCCTGTTGGACTCTCCCATTGGAAAATTCTCAATTAAATTTGGAGATTGAGTCCCTGGATAATCATAATCTCCTGTCATTAAGATAAGAGACTCTTTGTTGGTAGATGATTTTGCAAATTCTATTGATACAAGTAGAATTGAGGAAGTTTTATCTGAAGAAGGTCTCAAGGAGGAGGCTGCCTGTTTTGGCACCAAATCCTTCTTGATGGACATATGTTAATAGTGTTTCGTAATTATAAACTTAGTGTGGATTCTTTTTAAGTGGCTGCGATGATGGTATTATGTATGTGAGTATTTTTTTATACGCCGCTTTAGTAGATTCTTTTGTATTGTCACGTAATGAAGCTTGGTTTATGGGCTTCTTTTATAGTTTATGGTCTGAGAAATAATACGTTATCTGATGTGCATGTTGCTTCGACGTTGTTATGTGCACATTAAGCTGGATCATAGCACTATTTGAACTCCGCTTTGATGTTCATTTGTATGCTTATTAAAAAGGTGAAATCTGTTTAACATGTTCTTTTATAATATGTTAATTAACGTTCATTTTTTACAAATTTGTAGGTTTTCGAAGAATCTATAGACCATGAGATCAAGTCGATTTATGCATTATTAAATTAGGTGACCCAATACATGTATTTAATGTTTTACAATTTATGTATTAAATTCTTGTAAACCTTTACCGACGACAATGTAATTTAAATTTTTATTATCAATGTAAATATCTTTCTAAACATATGTGGGTAATGTTGAATCTCGG

mRNA sequence

GCCTTCCGAGAGATGGCGAAGAGGGTGCCTGTGTTTGTTGATGGGAAGTTCGTGAAGGATTTGTTTTGGTCTATTTATGGCGCTAAAGCTCCAGCTTTTTATGTTCCTGCTAGATTATCCAATCCATTTTAGTTATCTTTTCTATCAATGTGGGAGTGGAGAGTTCGAAGGAAATGGCTGTTCGAATCCTAGATCGTTGGTTTCGGTGGAAAATGGAGCGGAGATTCAAATCATTGAGAAGTTTTTGAGTGGGGATGGGGGTAATTCCTATTGGGCAAATCTAAATCTTGTTTTGGAGTTAGTTATTGGAAGTGGAGGTGAGGTTAAACATTCTTATATTCCGAATCAGTCTTTAAATGCTTCACATATCAAATGGACTTCTGTTCTGCAGGTTTTCGAAGAATCTATAGACCATGAGATCAAGTCGATTTATGCATTATTAAATTAGGTGACCCAATACATGTATTTAATGTTTTACAATTTATGTATTAAATTCTTGTAAACCTTTACCGACGACAATGTAATTTAAATTTTTATTATCAATGTAAATATCTTTCTAAACATATGTGGGTAATGTTGAATCTCGG

Coding sequence (CDS)

ATGGCGCTAAAGCTCCAGCTTTTTATGTTCCTGCTAGATTATCCAATCCATTTTAGTTATCTTTTCTATCAATGTGGGAGTGGAGAGTTCGAAGGAAATGGCTGTTCGAATCCTAGATCGTTGGTTTCGGTGGAAAATGGAGCGGAGATTCAAATCATTGAGAAGTTTTTGAGTGGGGATGGGGGTAATTCCTATTGGGCAAATCTAAATCTTGTTTTGGAGTTAGTTATTGGAAGTGGAGGTGAGGTTAAACATTCTTATATTCCGAATCAGTCTTTAAATGCTTCACATATCAAATGGACTTCTGTTCTGCAGGTTTTCGAAGAATCTATAGACCATGAGATCAAGTCGATTTATGCATTATTAAATTAG

Protein sequence

MALKLQLFMFLLDYPIHFSYLFYQCGSGEFEGNGCSNPRSLVSVENGAEIQIIEKFLSGDGGNSYWANLNLVLELVIGSGGEVKHSYIPNQSLNASHIKWTSVLQVFEESIDHEIKSIYALLN
Homology
BLAST of IVF0019174 vs. ExPASy Swiss-Prot
Match: Q9LQK7 (Protein ABCI7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABCI7 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.1e-13
Identity = 39/101 (38.61%), Postives = 57/101 (56.44%), Query Frame = 0

Query: 12  LDYPIHFSYLFYQCGSGEFEGNGCSNPRSLVSVENGAEIQIIEKFLSGDGGNSYWANLNL 71
           ++ PI+  Y   + G  E +    SNPR  V VE G EI I+E+F+  D    YW   N 
Sbjct: 200 VENPIYLRYFSGETGDRESKRLPVSNPRVFVLVEEGGEIGIVEEFVGKDEEGFYWT--NP 259

Query: 72  VLELVIGSGGEVKHSYIPNQSLNASHIKWTSVLQVFEESID 113
           VLE+V+    ++KHSY+  +S+ ++HIKWT V Q  E   +
Sbjct: 260 VLEVVVQKNAKLKHSYLQKESMASAHIKWTFVRQEAESEYE 298

BLAST of IVF0019174 vs. ExPASy TrEMBL
Match: A0A1S3CRH6 (protein ABCI7, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103503518 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.3e-63
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0

Query: 1   MALKLQLFMFLLDYPIHFSYLFYQCGSGEFEGNGCSNPRSLVSVENGAEIQIIEKFLSGD 60
           MALKLQLFMFLLDYPIHFSYLFYQCGSGEFEGNGCSNPRSLVSVENGAEIQIIEKFLSGD
Sbjct: 1   MALKLQLFMFLLDYPIHFSYLFYQCGSGEFEGNGCSNPRSLVSVENGAEIQIIEKFLSGD 60

Query: 61  GGNSYWANLNLVLELVIGSGGEVKHSYIPNQSLNASHIKWTSVLQVFEESIDHEIKSIYA 120
           GGNSYWANLNLVLELVIGSGGEVKHSYIPNQSLNASHIKWTSVLQVFEESIDHEIKSIYA
Sbjct: 61  GGNSYWANLNLVLELVIGSGGEVKHSYIPNQSLNASHIKWTSVLQVFEESIDHEIKSIYA 120

Query: 121 LLN 124
           LLN
Sbjct: 121 LLN 123

BLAST of IVF0019174 vs. ExPASy TrEMBL
Match: A0A5D3E5C0 (Protein ABCI7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004240 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.8e-23
Identity = 61/94 (64.89%), Postives = 70/94 (74.47%), Query Frame = 0

Query: 12  LDYPIHFSYLFYQCGSGEFEGNGCSNPRSLVSVENGAEIQIIEKFLSGDGGNSYWANLNL 71
           ++ PIHF Y     G    +    SNPR LV VENG EI+IIE+FLSGDGG SYW+  N 
Sbjct: 221 VENPIHFRYYSIDGGDEGSKELAVSNPRVLVLVENGGEIEIIEEFLSGDGGKSYWS--NP 280

Query: 72  VLELVIGSGGEVKHSYIPNQSLNASHIKWTSVLQ 106
           VLE+VIGSGG+VKHSYI NQSLNA+HIKWTSV Q
Sbjct: 281 VLEVVIGSGGKVKHSYIQNQSLNAAHIKWTSVQQ 312

BLAST of IVF0019174 vs. ExPASy TrEMBL
Match: A0A0A0LEE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G903500 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.8e-23
Identity = 61/94 (64.89%), Postives = 70/94 (74.47%), Query Frame = 0

Query: 12  LDYPIHFSYLFYQCGSGEFEGNGCSNPRSLVSVENGAEIQIIEKFLSGDGGNSYWANLNL 71
           ++ PIHF Y     G    +    SNPR LV VENG EI+IIE+FLSGDGG SYW+  N 
Sbjct: 214 VENPIHFRYYSINGGDEGSKELAVSNPRVLVLVENGGEIEIIEEFLSGDGGKSYWS--NP 273

Query: 72  VLELVIGSGGEVKHSYIPNQSLNASHIKWTSVLQ 106
           VLE+VIGSGG+VKHSYI NQSLNA+HIKWTSV Q
Sbjct: 274 VLEVVIGSGGKVKHSYIQNQSLNAAHIKWTSVQQ 305

BLAST of IVF0019174 vs. ExPASy TrEMBL
Match: A0A1S3CQ30 (protein ABCI7, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103503519 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.8e-23
Identity = 61/94 (64.89%), Postives = 70/94 (74.47%), Query Frame = 0

Query: 12  LDYPIHFSYLFYQCGSGEFEGNGCSNPRSLVSVENGAEIQIIEKFLSGDGGNSYWANLNL 71
           ++ PIHF Y     G    +    SNPR LV VENG EI+IIE+FLSGDGG SYW+  N 
Sbjct: 221 VENPIHFRYYSIDGGDEGSKELAVSNPRVLVLVENGGEIEIIEEFLSGDGGKSYWS--NP 280

Query: 72  VLELVIGSGGEVKHSYIPNQSLNASHIKWTSVLQ 106
           VLE+VIGSGG+VKHSYI NQSLNA+HIKWTSV Q
Sbjct: 281 VLEVVIGSGGKVKHSYIQNQSLNAAHIKWTSVQQ 312

BLAST of IVF0019174 vs. ExPASy TrEMBL
Match: A0A7J6IB91 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_013844 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 6.4e-21
Identity = 54/95 (56.84%), Postives = 67/95 (70.53%), Query Frame = 0

Query: 12  LDYPIHFSYLFYQCGSGEFEGNGCSNPRSLVSVENGAEIQIIEKFLSGDGGNSYWANLNL 71
           ++ PIH +YL  +      E    SNPR LV VENG E++IIE+FL GDG   YWA  N 
Sbjct: 198 VESPIHLTYLSIEGSEKGSEKMPISNPRVLVLVENGGEVEIIEEFLGGDGNKCYWA--NA 257

Query: 72  VLELVIGSGGEVKHSYIPNQSLNASHIKWTSVLQV 107
           VL++VIG GG+VKHSY+  QSLNA+HIKWTSV Q+
Sbjct: 258 VLDVVIGEGGKVKHSYVQTQSLNAAHIKWTSVRQI 290

BLAST of IVF0019174 vs. NCBI nr
Match: XP_008465947.1 (PREDICTED: protein ABCI7, chloroplastic-like [Cucumis melo])

HSP 1 Score: 248 bits (634), Expect = 4.69e-83
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0

Query: 1   MALKLQLFMFLLDYPIHFSYLFYQCGSGEFEGNGCSNPRSLVSVENGAEIQIIEKFLSGD 60
           MALKLQLFMFLLDYPIHFSYLFYQCGSGEFEGNGCSNPRSLVSVENGAEIQIIEKFLSGD
Sbjct: 1   MALKLQLFMFLLDYPIHFSYLFYQCGSGEFEGNGCSNPRSLVSVENGAEIQIIEKFLSGD 60

Query: 61  GGNSYWANLNLVLELVIGSGGEVKHSYIPNQSLNASHIKWTSVLQVFEESIDHEIKSIYA 120
           GGNSYWANLNLVLELVIGSGGEVKHSYIPNQSLNASHIKWTSVLQVFEESIDHEIKSIYA
Sbjct: 61  GGNSYWANLNLVLELVIGSGGEVKHSYIPNQSLNASHIKWTSVLQVFEESIDHEIKSIYA 120

Query: 121 LLN 123
           LLN
Sbjct: 121 LLN 123

BLAST of IVF0019174 vs. NCBI nr
Match: XP_038877817.1 (protein ABCI7, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 116 bits (291), Expect = 4.79e-28
Identity = 61/91 (67.03%), Postives = 68/91 (74.73%), Query Frame = 0

Query: 15  PIHFSYLFYQCGSGEFEGNGCSNPRSLVSVENGAEIQIIEKFLSGDGGNSYWANLNLVLE 74
           PIHF Y     G    +    SNPR LV VENG EI+IIE+FL+GDGG SYWAN   VLE
Sbjct: 210 PIHFRYFSINGGEEGSKELAVSNPRVLVLVENGGEIEIIEEFLTGDGGRSYWANP--VLE 269

Query: 75  LVIGSGGEVKHSYIPNQSLNASHIKWTSVLQ 105
           +VIGSGG+VKHSYI NQSLNA+HIKWTSV Q
Sbjct: 270 VVIGSGGKVKHSYIQNQSLNAAHIKWTSVQQ 298

BLAST of IVF0019174 vs. NCBI nr
Match: XP_038877814.1 (protein ABCI7, chloroplastic isoform X1 [Benincasa hispida] >XP_038877815.1 protein ABCI7, chloroplastic isoform X1 [Benincasa hispida] >XP_038877816.1 protein ABCI7, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 116 bits (291), Expect = 9.85e-28
Identity = 61/91 (67.03%), Postives = 68/91 (74.73%), Query Frame = 0

Query: 15  PIHFSYLFYQCGSGEFEGNGCSNPRSLVSVENGAEIQIIEKFLSGDGGNSYWANLNLVLE 74
           PIHF Y     G    +    SNPR LV VENG EI+IIE+FL+GDGG SYWAN   VLE
Sbjct: 210 PIHFRYFSINGGEEGSKELAVSNPRVLVLVENGGEIEIIEEFLTGDGGRSYWANP--VLE 269

Query: 75  LVIGSGGEVKHSYIPNQSLNASHIKWTSVLQ 105
           +VIGSGG+VKHSYI NQSLNA+HIKWTSV Q
Sbjct: 270 VVIGSGGKVKHSYIQNQSLNAAHIKWTSVQQ 298

BLAST of IVF0019174 vs. NCBI nr
Match: XP_004148492.1 (protein ABCI7, chloroplastic [Cucumis sativus] >KGN60410.1 hypothetical protein Csa_001454 [Cucumis sativus])

HSP 1 Score: 116 bits (290), Expect = 1.44e-27
Identity = 61/91 (67.03%), Postives = 68/91 (74.73%), Query Frame = 0

Query: 15  PIHFSYLFYQCGSGEFEGNGCSNPRSLVSVENGAEIQIIEKFLSGDGGNSYWANLNLVLE 74
           PIHF Y     G    +    SNPR LV VENG EI+IIE+FLSGDGG SYW+N   VLE
Sbjct: 217 PIHFRYYSINGGDEGSKELAVSNPRVLVLVENGGEIEIIEEFLSGDGGKSYWSNP--VLE 276

Query: 75  LVIGSGGEVKHSYIPNQSLNASHIKWTSVLQ 105
           +VIGSGG+VKHSYI NQSLNA+HIKWTSV Q
Sbjct: 277 VVIGSGGKVKHSYIQNQSLNAAHIKWTSVQQ 305

BLAST of IVF0019174 vs. NCBI nr
Match: XP_008465948.1 (PREDICTED: protein ABCI7, chloroplastic-like [Cucumis melo] >KAA0038548.1 protein ABCI7 [Cucumis melo var. makuwa] >TYK31144.1 protein ABCI7 [Cucumis melo var. makuwa])

HSP 1 Score: 116 bits (290), Expect = 1.52e-27
Identity = 61/91 (67.03%), Postives = 68/91 (74.73%), Query Frame = 0

Query: 15  PIHFSYLFYQCGSGEFEGNGCSNPRSLVSVENGAEIQIIEKFLSGDGGNSYWANLNLVLE 74
           PIHF Y     G    +    SNPR LV VENG EI+IIE+FLSGDGG SYW+N   VLE
Sbjct: 224 PIHFRYYSIDGGDEGSKELAVSNPRVLVLVENGGEIEIIEEFLSGDGGKSYWSNP--VLE 283

Query: 75  LVIGSGGEVKHSYIPNQSLNASHIKWTSVLQ 105
           +VIGSGG+VKHSYI NQSLNA+HIKWTSV Q
Sbjct: 284 VVIGSGGKVKHSYIQNQSLNAAHIKWTSVQQ 312

BLAST of IVF0019174 vs. TAIR 10
Match: AT1G32500.1 (non-intrinsic ABC protein 6 )

HSP 1 Score: 74.7 bits (182), Expect = 5.7e-14
Identity = 39/101 (38.61%), Postives = 57/101 (56.44%), Query Frame = 0

Query: 12  LDYPIHFSYLFYQCGSGEFEGNGCSNPRSLVSVENGAEIQIIEKFLSGDGGNSYWANLNL 71
           ++ PI+  Y   + G  E +    SNPR  V VE G EI I+E+F+  D    YW   N 
Sbjct: 200 VENPIYLRYFSGETGDRESKRLPVSNPRVFVLVEEGGEIGIVEEFVGKDEEGFYWT--NP 259

Query: 72  VLELVIGSGGEVKHSYIPNQSLNASHIKWTSVLQVFEESID 113
           VLE+V+    ++KHSY+  +S+ ++HIKWT V Q  E   +
Sbjct: 260 VLEVVVQKNAKLKHSYLQKESMASAHIKWTFVRQEAESEYE 298

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LQK78.1e-1338.61Protein ABCI7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABCI7 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A1S3CRH62.3e-63100.00protein ABCI7, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103503518 PE=4 S... [more]
A0A5D3E5C01.8e-2364.89Protein ABCI7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004240... [more]
A0A0A0LEE91.8e-2364.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G903500 PE=4 SV=1[more]
A0A1S3CQ301.8e-2364.89protein ABCI7, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103503519 PE=4 S... [more]
A0A7J6IB916.4e-2156.84Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_013844 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_008465947.14.69e-83100.00PREDICTED: protein ABCI7, chloroplastic-like [Cucumis melo][more]
XP_038877817.14.79e-2867.03protein ABCI7, chloroplastic isoform X2 [Benincasa hispida][more]
XP_038877814.19.85e-2867.03protein ABCI7, chloroplastic isoform X1 [Benincasa hispida] >XP_038877815.1 prot... [more]
XP_004148492.11.44e-2767.03protein ABCI7, chloroplastic [Cucumis sativus] >KGN60410.1 hypothetical protein ... [more]
XP_008465948.11.52e-2767.03PREDICTED: protein ABCI7, chloroplastic-like [Cucumis melo] >KAA0038548.1 protei... [more]
Match NameE-valueIdentityDescription
AT1G32500.15.7e-1438.61non-intrinsic ABC protein 6 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000825SUF system FeS cluster assembly, SufBDPFAMPF01458SUFBDcoord: 37..105
e-value: 7.3E-6
score: 25.8
IPR011542SUF system FeS cluster assembly, SufDPANTHERPTHR43575PROTEIN ABCI7, CHLOROPLASTICcoord: 12..105
IPR037284SUF system FeS cluster assembly, SufBD superfamilySUPERFAMILY101960Stabilizer of iron transporter SufDcoord: 14..104

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0019174.1IVF0019174.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016226 iron-sulfur cluster assembly