IVF0019077 (gene) Melon (IVF77) v1

Overview
NameIVF0019077
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionHistidine-rich glycoprotein-like
Locationchr04: 10614429 .. 10614776 (-)
RNA-Seq ExpressionIVF0019077
SyntenyIVF0019077
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGAGTAGAGGCAGAGCTGAACAATCATCATCATCTTGGAGAGGTGAAGGCAGAGCTCTTTCATCGTCATCATTTTGGAGAGGTAAAGTTGCATCATCATCGTCATCTTAGAGAGACGAAGGTAAAGCTGCTTCATTGCATCAGCTTTAGAGAAGTGGAAATAAAGTTGCACCGTCTTTGTCATCTTAGAGTGGCAGAGGTAGAGATGCACCATCATTATCCTCTCGAAGTTGCACTATCATCATTTAAAGAGTTGGAGGTCGAGATGTATTATCATCATCATGCTCGAAGCTGCAACACATTGGAGATGAATAATCCCTTTGATGGTCGATATTGGAGATAA

mRNA sequence

ATGGAAAGAGTAGAGGCAGAGCTGAACAATCATCATCATCTTGGAGAGGTGAAGGCAGAGCTCTTTCATCGTCATCATTTTGGAGAGGTAAAGTTGCATCATCATCGTCATCTTAGAGAGACGAAGGTAAAGCTGCTTCATTGCATCAGCTTTAGAGAAGTGGAAATAAAGTTGCACCGTCTTTGTCATCTTAGAGTGGCAGAGGTAGAGATGCACCATCATTATCCTCTCGAAGTTGCACTATCATCATTTAAAGAGTTGGAGGTCGAGATGTATTATCATCATCATGCTCGAAGCTGCAACACATTGGAGATGAATAATCCCTTTGATGGTCGATATTGGAGATAA

Coding sequence (CDS)

ATGGAAAGAGTAGAGGCAGAGCTGAACAATCATCATCATCTTGGAGAGGTGAAGGCAGAGCTCTTTCATCGTCATCATTTTGGAGAGGTAAAGTTGCATCATCATCGTCATCTTAGAGAGACGAAGGTAAAGCTGCTTCATTGCATCAGCTTTAGAGAAGTGGAAATAAAGTTGCACCGTCTTTGTCATCTTAGAGTGGCAGAGGTAGAGATGCACCATCATTATCCTCTCGAAGTTGCACTATCATCATTTAAAGAGTTGGAGGTCGAGATGTATTATCATCATCATGCTCGAAGCTGCAACACATTGGAGATGAATAATCCCTTTGATGGTCGATATTGGAGATAA

Protein sequence

MERVEAELNNHHHLGEVKAELFHRHHFGEVKLHHHRHLRETKVKLLHCISFREVEIKLHRLCHLRVAEVEMHHHYPLEVALSSFKELEVEMYYHHHARSCNTLEMNNPFDGRYWR
Homology
[Close]
BLAST of IVF0019077 vs. ExPASy TrEMBL
Match: A0A5D3C3Q9 (Histidine-rich glycoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G002720 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 6.6e-20
Identity = 66/129 (51.16%), Postives = 77/129 (59.69%), Query Frame = 0 

Query: 11  HHHLGEVKAELFHRHHFG--EVKLHHHRHLRETK-----VKLLH--------CISFREVE 70
           HH  GEV+A+L      G  EV+LHHHRHL +TK     V +L          I    VE
Sbjct: 151 HHPFGEVEAKLHRCLCLGKREVELHHHRHLGDTKAECTIVSILETWRQSCTIIIILERVE 210

Query: 71  IKLHRLCHLRVAEVEMHHH-------------YPLEVALSSFKELEVEMYYHHHARSCNT 112
           ++LH  CHLR  E E+HHH             +PLEVA SSF EL+V+MYYHHHARSCNT
Sbjct: 211 VELHLHCHLRGVEEELHHHHHLGDAEVKLHHRHPLEVAPSSFGELKVDMYYHHHARSCNT 270

[Close]
BLAST of IVF0019077 vs. ExPASy TrEMBL
Match: A0A5D3DTT9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00090 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 5.1e-12
Identity = 45/77 (58.44%), Postives = 51/77 (66.23%), Query Frame = 0 

Query: 40  ETKVKLLHCISFREVEIKLHRLCHLRVAEVEMHH-HYPLEVALSSFKELEVEMYYHHHAR 99
           E +V+L   + FREVE KLH    LR  E E+HH HY        F ELE EMYYHHHAR
Sbjct: 224 EEEVELHIVVIFREVEAKLHDHHLLREVEAELHHSHY--------FGELEAEMYYHHHAR 283

Query: 100 SCNTLEMNNPFDGRYWR 116
           S N LEMN+PF+GRYWR
Sbjct: 284 SYNILEMNDPFNGRYWR 292

[Close]
BLAST of IVF0019077 vs. ExPASy TrEMBL
Match: A0A5D3C8P6 (Histidine-rich glycoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00230 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 6.6e-12
Identity = 47/105 (44.76%), Postives = 60/105 (57.14%), Query Frame = 0 

Query: 5   EAELNNHHHLGEVKAELFHR-------------HHFGEVKLHHHRHLRETKVKLLHCISF 64
           E EL++H HLGE + ELFHR             HHF + ++HHHR+LRE K +L H    
Sbjct: 433 EVELHHHCHLGEAEVELFHRHHLREAEAKLHCHHHFRDAEMHHHRYLREAKAELHHRCYL 492

Query: 65  REVEIKLHRLCHLRVAEVEMHHHYPLEVALSSFKELEVEMYYHHH 97
            EVE K+H   HLR AE E HHHY         K+ E E+++HHH
Sbjct: 493 GEVEAKMHHCRHLREAEAE-HHHY------RHHKKAEAELHHHHH 530

[Close]
BLAST of IVF0019077 vs. ExPASy TrEMBL
Match: A0A5A7U6T5 (Histidine-rich glycoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G00350 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 6.6e-12
Identity = 47/105 (44.76%), Postives = 60/105 (57.14%), Query Frame = 0 

Query: 5   EAELNNHHHLGEVKAELFHR-------------HHFGEVKLHHHRHLRETKVKLLHCISF 64
           E EL++H HLGE + ELFHR             HHF + ++HHHR+LRE K +L H    
Sbjct: 130 EVELHHHCHLGEAEVELFHRHHLREAEAKLHCHHHFRDAEMHHHRYLREAKAELHHRCYL 189

Query: 65  REVEIKLHRLCHLRVAEVEMHHHYPLEVALSSFKELEVEMYYHHH 97
            EVE K+H   HLR AE E HHHY         K+ E E+++HHH
Sbjct: 190 GEVEAKMHHCRHLREAEAE-HHHY------RHHKKAEAELHHHHH 227

[Close]
BLAST of IVF0019077 vs. ExPASy TrEMBL
Match: A0A1S3B5B4 (histidine-rich glycoprotein-like OS=Cucumis melo OX=3656 GN=LOC103485951 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 6.6e-12
Identity = 47/105 (44.76%), Postives = 60/105 (57.14%), Query Frame = 0 

Query: 5   EAELNNHHHLGEVKAELFHR-------------HHFGEVKLHHHRHLRETKVKLLHCISF 64
           E EL++H HLGE + ELFHR             HHF + ++HHHR+LRE K +L H    
Sbjct: 148 EVELHHHCHLGEAEVELFHRHHLREAEAKLHCHHHFRDAEMHHHRYLREAKAELHHRCYL 207

Query: 65  REVEIKLHRLCHLRVAEVEMHHHYPLEVALSSFKELEVEMYYHHH 97
            EVE K+H   HLR AE E HHHY         K+ E E+++HHH
Sbjct: 208 GEVEAKMHHCRHLREAEAE-HHHY------RHHKKAEAELHHHHH 245

[Close]
BLAST of IVF0019077 vs. NCBI nr
Match: TYK05019.1 (histidine-rich glycoprotein-like [Cucumis melo var. makuwa])

HSP 1 Score: 106 bits (264), Expect = 3.49e-25
Identity = 66/129 (51.16%), Postives = 77/129 (59.69%), Query Frame = 0 

Query: 11  HHHLGEVKAELFHRHHFG--EVKLHHHRHLRETK-----VKLLHC--------ISFREVE 70
           HH  GEV+A+L      G  EV+LHHHRHL +TK     V +L          I    VE
Sbjct: 151 HHPFGEVEAKLHRCLCLGKREVELHHHRHLGDTKAECTIVSILETWRQSCTIIIILERVE 210

Query: 71  IKLHRLCHLRVAEVEMHHHY-------------PLEVALSSFKELEVEMYYHHHARSCNT 111
           ++LH  CHLR  E E+HHH+             PLEVA SSF EL+V+MYYHHHARSCNT
Sbjct: 211 VELHLHCHLRGVEEELHHHHHLGDAEVKLHHRHPLEVAPSSFGELKVDMYYHHHARSCNT 270

[Close]
BLAST of IVF0019077 vs. NCBI nr
Match: KAA0042150.1 (hypothetical protein E6C27_scaffold67G006410 [Cucumis melo var. makuwa] >TYK26725.1 hypothetical protein E5676_scaffold124G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 80.9 bits (198), Expect = 1.90e-15
Identity = 45/77 (58.44%), Postives = 51/77 (66.23%), Query Frame = 0 

Query: 40  ETKVKLLHCISFREVEIKLHRLCHLRVAEVEMHH-HYPLEVALSSFKELEVEMYYHHHAR 99
           E +V+L   + FREVE KLH    LR  E E+HH HY        F ELE EMYYHHHAR
Sbjct: 224 EEEVELHIVVIFREVEAKLHDHHLLREVEAELHHSHY--------FGELEAEMYYHHHAR 283

Query: 100 SCNTLEMNNPFDGRYWR 115
           S N LEMN+PF+GRYWR
Sbjct: 284 SYNILEMNDPFNGRYWR 292

[Close]
BLAST of IVF0019077 vs. NCBI nr
Match: KAA0049886.1 (histidine-rich glycoprotein-like [Cucumis melo var. makuwa])

HSP 1 Score: 79.7 bits (195), Expect = 3.02e-15
Identity = 47/105 (44.76%), Postives = 60/105 (57.14%), Query Frame = 0 

Query: 5   EAELNNHHHLGEVKAELFHRHH-------------FGEVKLHHHRHLRETKVKLLHCISF 64
           E EL++H HLGE + ELFHRHH             F + ++HHHR+LRE K +L H    
Sbjct: 130 EVELHHHCHLGEAEVELFHRHHLREAEAKLHCHHHFRDAEMHHHRYLREAKAELHHRCYL 189

Query: 65  REVEIKLHRLCHLRVAEVEMHHHYPLEVALSSFKELEVEMYYHHH 96
            EVE K+H   HLR AE E HHHY         K+ E E+++HHH
Sbjct: 190 GEVEAKMHHCRHLREAEAE-HHHYR------HHKKAEAELHHHHH 227

[Close]
BLAST of IVF0019077 vs. NCBI nr
Match: XP_008441951.1 (PREDICTED: histidine-rich glycoprotein-like [Cucumis melo])

HSP 1 Score: 79.7 bits (195), Expect = 3.90e-15
Identity = 47/105 (44.76%), Postives = 60/105 (57.14%), Query Frame = 0 

Query: 5   EAELNNHHHLGEVKAELFHRHH-------------FGEVKLHHHRHLRETKVKLLHCISF 64
           E EL++H HLGE + ELFHRHH             F + ++HHHR+LRE K +L H    
Sbjct: 148 EVELHHHCHLGEAEVELFHRHHLREAEAKLHCHHHFRDAEMHHHRYLREAKAELHHRCYL 207

Query: 65  REVEIKLHRLCHLRVAEVEMHHHYPLEVALSSFKELEVEMYYHHH 96
            EVE K+H   HLR AE E HHHY         K+ E E+++HHH
Sbjct: 208 GEVEAKMHHCRHLREAEAE-HHHYR------HHKKAEAELHHHHH 245

[Close]
BLAST of IVF0019077 vs. NCBI nr
Match: TYK07624.1 (histidine-rich glycoprotein-like [Cucumis melo var. makuwa])

HSP 1 Score: 79.7 bits (195), Expect = 1.44e-14
Identity = 47/105 (44.76%), Postives = 60/105 (57.14%), Query Frame = 0 

Query: 5   EAELNNHHHLGEVKAELFHRHH-------------FGEVKLHHHRHLRETKVKLLHCISF 64
           E EL++H HLGE + ELFHRHH             F + ++HHHR+LRE K +L H    
Sbjct: 433 EVELHHHCHLGEAEVELFHRHHLREAEAKLHCHHHFRDAEMHHHRYLREAKAELHHRCYL 492

Query: 65  REVEIKLHRLCHLRVAEVEMHHHYPLEVALSSFKELEVEMYYHHH 96
            EVE K+H   HLR AE E HHHY         K+ E E+++HHH
Sbjct: 493 GEVEAKMHHCRHLREAEAE-HHHYR------HHKKAEAELHHHHH 530

The following BLAST results are available for this feature:
BLAST of IVF0019077 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0019077 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3C3Q96.6e-2051.16Histidine-rich glycoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5D3DTT95.1e-1258.44Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3C8P66.6e-1244.76Histidine-rich glycoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5A7U6T56.6e-1244.76Histidine-rich glycoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A1S3B5B46.6e-1244.76histidine-rich glycoprotein-like OS=Cucumis melo OX=3656 GN=LOC103485951 PE=4 SV... [more]
BLAST of IVF0019077 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK05019.13.49e-2551.16histidine-rich glycoprotein-like [Cucumis melo var. makuwa][more]
KAA0042150.11.90e-1558.44hypothetical protein E6C27_scaffold67G006410 [Cucumis melo var. makuwa] >TYK2672... [more]
KAA0049886.13.02e-1544.76histidine-rich glycoprotein-like [Cucumis melo var. makuwa][more]
XP_008441951.13.90e-1544.76PREDICTED: histidine-rich glycoprotein-like [Cucumis melo][more]
TYK07624.11.44e-1444.76histidine-rich glycoprotein-like [Cucumis melo var. makuwa][more]
BLAST of IVF0019077 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0019077.1IVF0019077.1mRNA