IVF0019048 (gene) Melon (IVF77) v1

Overview
NameIVF0019048
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCACTA en-spm transposon protein
Locationchr05: 2436950 .. 2437150 (+)
RNA-Seq ExpressionIVF0019048
SyntenyIVF0019048
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGATGCGAGCAGTTCCATGACCTCATGTTCAAAGTCTACGGTAGATTTTCAATTATGGGATGCGCTAGATCAAGCTATGCAATGGATTGAAGAACAGACAAGAAATCATGATGGGTTAACTTCAGAAGTGGAACGAATGCTAAAGCTCATAGAAGACATGAGTCGGGCACAGCAAAGACCACTACATGATCCCTAG

mRNA sequence

ATGGTCGATGCGAGCAGTTCCATGACCTCATGTTCAAAGTCTACGGTAGATTTTCAATTATGGGATGCGCTAGATCAAGCTATGCAATGGATTGAAGAACAGACAAGAAATCATGATGGGTTAACTTCAGAAGTGGAACGAATGCTAAAGCTCATAGAAGACATGAGTCGGGCACAGCAAAGACCACTACATGATCCCTAG

Coding sequence (CDS)

ATGGTCGATGCGAGCAGTTCCATGACCTCATGTTCAAAGTCTACGGTAGATTTTCAATTATGGGATGCGCTAGATCAAGCTATGCAATGGATTGAAGAACAGACAAGAAATCATGATGGGTTAACTTCAGAAGTGGAACGAATGCTAAAGCTCATAGAAGACATGAGTCGGGCACAGCAAAGACCACTACATGATCCCTAG

Protein sequence

MVDASSSMTSCSKSTVDFQLWDALDQAMQWIEEQTRNHDGLTSEVERMLKLIEDMSRAQQRPLHDP
Homology
BLAST of IVF0019048 vs. ExPASy TrEMBL
Match: A0A5A7V7J7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1465G00220 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.2e-28
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0

Query: 1  MVDASSSMTSCSKSTVDFQLWDALDQAMQWIEEQTRNHDGLTSEVERMLKLIEDMSRAQQ 60
          MVDASSSMTSCSKSTVDFQLWDALDQAMQWIEEQTRNHDGLTSEVERMLKLIEDMSRAQQ
Sbjct: 19 MVDASSSMTSCSKSTVDFQLWDALDQAMQWIEEQTRNHDGLTSEVERMLKLIEDMSRAQQ 78

Query: 61 RPLHDP 67
          RPLHDP
Sbjct: 79 RPLHDP 84

BLAST of IVF0019048 vs. ExPASy TrEMBL
Match: A0A5D3C320 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00640 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.4e-14
Identity = 46/62 (74.19%), Postives = 50/62 (80.65%), Query Frame = 0

Query: 5   SSSMTSCSKSTVDFQLWDALDQAMQWIEEQTRNHDGLTSEVERMLKLIEDMSRAQQRPLH 64
           SSS TSCS+STV+ QL   LDQAMQ IEEQTRNHD L S+VERM KLIEDM+R QQ P H
Sbjct: 176 SSSTTSCSQSTVELQLQAKLDQAMQQIEEQTRNHDALVSKVERMRKLIEDMTRVQQGPPH 235

Query: 65  DP 67
           DP
Sbjct: 236 DP 237

BLAST of IVF0019048 vs. ExPASy TrEMBL
Match: A0A5D3DLR3 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00110 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.0e-13
Identity = 45/62 (72.58%), Postives = 48/62 (77.42%), Query Frame = 0

Query: 5   SSSMTSCSKSTVDFQLWDALDQAMQWIEEQTRNHDGLTSEVERMLKLIEDMSRAQQRPLH 64
           +SSMT CS+S V+ QL   LDQAMQ IEEQTRNHD L SEVERM KLIEDMSR  Q P H
Sbjct: 109 NSSMTLCSQSIVELQLRAPLDQAMQQIEEQTRNHDALASEVERMRKLIEDMSRVLQGPPH 168

Query: 65  DP 67
           DP
Sbjct: 169 DP 170

BLAST of IVF0019048 vs. ExPASy TrEMBL
Match: A0A5A7TGL8 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002200 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.5e-13
Identity = 43/65 (66.15%), Postives = 50/65 (76.92%), Query Frame = 0

Query: 1   MVDASSSMTSCSKSTVDFQLWDALDQAMQWIEEQTRNHDGLTSEVERMLKLIEDMSRAQQ 60
           M  ASSSMTSC +S ++ QL    DQAMQ IEEQTRNH+ L SEVERM KLI+DM+R QQ
Sbjct: 53  MTSASSSMTSCPQSIIELQLQAKFDQAMQQIEEQTRNHEALVSEVERMRKLIDDMTREQQ 112

Query: 61  RPLHD 66
            PL+D
Sbjct: 113 GPLYD 117

BLAST of IVF0019048 vs. ExPASy TrEMBL
Match: A0A5A7VDZ5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G001440 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.7e-13
Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = 0

Query: 1   MVDASSSMTSCSKSTVDFQLWDALDQAMQWIEEQTRNHDGLTSEVERMLKLIEDMSRAQQ 60
           M +ASS+MTSCS+S V+ QLW AL +A   IE+QT NHD L  EVE+M KLI+DM+RAQQ
Sbjct: 283 MANASSAMTSCSQSIVELQLWVALQEATLRIEQQTSNHDALVLEVEQMRKLIKDMTRAQQ 342

Query: 61  RPLHDP 67
            P HDP
Sbjct: 343 GPPHDP 348

BLAST of IVF0019048 vs. NCBI nr
Match: KAA0061639.1 (uncharacterized protein E6C27_scaffold212G00080 [Cucumis melo var. makuwa] >TYK05867.1 uncharacterized protein E5676_scaffold1465G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 135 bits (339), Expect = 1.30e-39
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0

Query: 1  MVDASSSMTSCSKSTVDFQLWDALDQAMQWIEEQTRNHDGLTSEVERMLKLIEDMSRAQQ 60
          MVDASSSMTSCSKSTVDFQLWDALDQAMQWIEEQTRNHDGLTSEVERMLKLIEDMSRAQQ
Sbjct: 19 MVDASSSMTSCSKSTVDFQLWDALDQAMQWIEEQTRNHDGLTSEVERMLKLIEDMSRAQQ 78

Query: 61 RPLHDP 66
          RPLHDP
Sbjct: 79 RPLHDP 84

BLAST of IVF0019048 vs. NCBI nr
Match: KAA0040565.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK05608.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 89.0 bits (219), Expect = 1.06e-19
Identity = 46/62 (74.19%), Postives = 50/62 (80.65%), Query Frame = 0

Query: 5   SSSMTSCSKSTVDFQLWDALDQAMQWIEEQTRNHDGLTSEVERMLKLIEDMSRAQQRPLH 64
           SSS TSCS+STV+ QL   LDQAMQ IEEQTRNHD L S+VERM KLIEDM+R QQ P H
Sbjct: 176 SSSTTSCSQSTVELQLQAKLDQAMQQIEEQTRNHDALVSKVERMRKLIEDMTRVQQGPPH 235

Query: 65  DP 66
           DP
Sbjct: 236 DP 237

BLAST of IVF0019048 vs. NCBI nr
Match: KAA0041988.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK17924.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 84.7 bits (208), Expect = 3.18e-19
Identity = 43/65 (66.15%), Postives = 50/65 (76.92%), Query Frame = 0

Query: 1   MVDASSSMTSCSKSTVDFQLWDALDQAMQWIEEQTRNHDGLTSEVERMLKLIEDMSRAQQ 60
           M  ASSSMTSC +S ++ QL    DQAMQ IEEQTRNH+ L SEVERM KLI+DM+R QQ
Sbjct: 53  MTSASSSMTSCPQSIIELQLQAKFDQAMQQIEEQTRNHEALVSEVERMRKLIDDMTREQQ 112

Query: 61  RPLHD 65
            PL+D
Sbjct: 113 GPLYD 117

BLAST of IVF0019048 vs. NCBI nr
Match: TYK31653.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 83.6 bits (205), Expect = 4.17e-19
Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0

Query: 11 CSKSTVDFQLWDALDQAMQWIEEQTRNHDGLTSEVERMLKLIEDMSRAQQRPLHDP 66
          C KSTV+ QL   LDQAMQWIEEQT+NH  LTS+VER+ K+I+DMSRAQQ P HDP
Sbjct: 35 CEKSTVELQLQAKLDQAMQWIEEQTKNHYALTSKVERIRKIIKDMSRAQQGPPHDP 90

BLAST of IVF0019048 vs. NCBI nr
Match: TYK15307.1 (uncharacterized protein E5676_scaffold1706G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 83.6 bits (205), Expect = 7.54e-19
Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = 0

Query: 1   MVDASSSMTSCSKSTVDFQLWDALDQAMQWIEEQTRNHDGLTSEVERMLKLIEDMSRAQQ 60
           M +ASS+MTSCS+S V+ QLW AL +A   IE+QT NHD L  EVE+M KLI+DM+RAQQ
Sbjct: 47  MANASSAMTSCSQSIVELQLWVALQEATLRIEQQTSNHDALVLEVEQMRKLIKDMTRAQQ 106

Query: 61  RPLHDP 66
            P HDP
Sbjct: 107 GPPHDP 112

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V7J72.2e-28100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3C3201.4e-1474.19CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3DLR32.0e-1372.58CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7TGL83.5e-1366.15NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7VDZ57.7e-1363.64CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
Match NameE-valueIdentityDescription
KAA0061639.11.30e-39100.00uncharacterized protein E6C27_scaffold212G00080 [Cucumis melo var. makuwa] >TYK0... [more]
KAA0040565.11.06e-1974.19CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK05608.1 CACTA en-... [more]
KAA0041988.13.18e-1966.15NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK17924.1 NBS-LRR t... [more]
TYK31653.14.17e-1971.43CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
TYK15307.17.54e-1963.64uncharacterized protein E5676_scaffold1706G00140 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0019048.1IVF0019048.1mRNA