IVF0019041 (gene) Melon (IVF77) v1

Overview


Name	IVF0019041
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Ribosome assembly factor mrt4
Location	chr11: 577108 .. 581468 (-)
RNA-Seq Expression	IVF0019041
Synteny	IVF0019041

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCAAGTCGAAGCGTGATAGACCAGGTACGTTTTTAATTCCTCTTGGACTTATATGTGCATTGTTTCCTGCTGCAAGAAGTTGAATCCGTTTCGTTATTTTGTGTGTTTTTTTTTGTTGGTTGTTCTATCTTTCTTGTTTTCGATGCTTAGAGAAGTAGGTTTAGCTCATCTGGTTAGAGGAGAGGTAGTTTAATATGTTAGGGGAAGTTGTCACTGCAAAAGTTGTATTTGAAAGATGGGTTTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTGCTATATGAGGGGAAGTTCATTCTGAAGTGCTTAGTTCACTAGGTTGGCTGCAAATGCACCGGCATTTGTGGTGTTACATTATGTAATAGGACCTGAATGTAAAATATATGAATACCCTTAGCATGCACACAACTAAGTATATCTTTTTGATTGCTATTTTCATGAGACACCTCTGATGAATTTGTTTTCTTGTTAAAATATAGCTTTTTTTCCTTCATTTTACTCTGTGGCAATGATAAGTTTTCTAGTTTCTAAGTTTCTGACCAAATTTTTTTACACCCAAGAAGATATTTGGTATTTCTTAGGCTAGGTTTGGTTTAGGCTTGGGATGGTCTTGACATCTTATCATCACTTATGGAGAAACATTCCACTAGTTGCTTCTTTCTGACAAGGTACTATAGTCGATATTTCTTCATGTTTATATCAACTTTCCTTGTAATTCAGATTTACAAACTAGTTTTTCTCTTTTCTTGCTTAAGCTTTGTATTGTTCATCTAAGGCCTTTCAAAGTTCTATTGACTATATTTGATGTGTTTCTTGTGCAAATACTTTAAGAGTGAGGAATTTGTAGAGGCATCCTGATAAGGAGTAGCCAGTAGGTCATTTGCTATCCACTTCTTGAACTAATACTTATTACAAATATGACATTTTGTGAGCGTCAAGCTTGCTTCCCTTGATGGTAGAGAGGCTTTAGTGTGCTCTAGAAGATAGTTTATGTTATCAATATGAGGGAAGAATAATTTTACTTTTTAGTATAGGTGTTGCCAGGAGGTGGGTGAGTTGAAAGTTTCTATCTATGTGCAAATATAGAGTTGCTTACAACACACGGGACATGTCTAAAGTTATAGTGTTTGTTTCCTGTGATTAATTTCTAAAAAATATACTTAGTAGGCTGGTTAATGTTGTTAAACAGAAACCAAATAGCAGTGAACCTAGGAGAACTTAATGACTTGCTTTAGCTGTAGGAAGATGCTAAAATTTTGTTATTTTCATTCAAGGTTCTTGTTGATTATGGGTTAAAGAGTTAGTTATATTATGGGTTAATTTGTATGAGGGAGTTTCTTGTGAAAAGTATGAGGCAGTTGAAGAAGTTAAATGACTTGTGGTGGTAGTATTCAGTGTCAAACTCGTGTGGTTTTTAACTTGAAAAGAAAGAGGAAAAATATGAGACTTAGTCCGATGCAGATTAGTGTTTTGAGTCTTTTAACTAATTGTTAGTGGGATAAATGCAGTTACTTTATCAAAAACAAAGAAGAAAGGAAGGGACCACAAGAAATCAATGGTGGAATCGATCAGGCAGGCTGTGGAAAATTACAACTCAGTTTTTGTTTTCACTGTTGAGAACATGAGAAACCTCAAGTTCAAGGACTCAGGGAGCAGCTGAAGTCAACTAGCAGGCGAGTTGTACTCCCTGACTTCTTTATCATTAATTTGCTTCATCATTTCAATATTGATTAGTGATACGAATGTACTTCCTCTATGTTGTTTGGTTAGCTTCTCGATTGCACAAGAAAAGATATAAATAATAAATAGCACATTTTAAAACTCAAAAGAAAAAATCATAATGTATGCATGCCTTAGGAGAAAGGATGAGAACACGTTGTTGCCATAACAACTGAAAACAACAATTTTAGCAGGTTATGGTAACAGCAATTGTTTCCATGCTTACACAGCAACCTTTCTCTCCTTGCTTTAAAAAGCTTCACTTAAAAAGGGGTTTACAACCTTTGGCTGCTGCATGTGTACCTATGTCTTAACATGTCCTCTATTCTTTTTCTTCTTGAAGGCATCAATGATTTGGAAATTATATTACTTGACTTTGAAACATATTTTAGCTATACATTATGTATCATGCTTCTGATACTCGTTCACATTTTTAAAGTGTATAAATGTTTAATGAGGCTAACTGGTTGAAAATCAGGATATTCTGTTTGTGAACTCATTTATTGCAATTTTTGAACTGCTGCTGGCTGAGTGGCATTTTGAGATGTCATGCATGGCCTCTCTCATTTTTTTCTAATGAATTGATGTGACCTGACCTGACCAGACAGTTTTAAGTGGGTTTCCAAATTGACTTTTTTTCCGCCCAATGATAGATTGTTTTTTGGAGCAAACAAAGTTATGCAAGTTTCTCTTGGGCGAAGTGCTTCTGATGAGATTCGGCCAGCCTTCACAAGGTTTCTAAGGTGAATCTCTTTTTCCAAGTGCATATACTTCAAGTGTTCTTTCTCTGTAGTCTTTAGGAAGTAACATTCACTCTTCTATTTTCAGCTTTTGCATGGAAATACTGGACTTTGCTTCACAAACTTACCAAAAGAAGAGGTTGAGAGGTAAATAAGCATGCACTGTTTAAAATCGACAAGCTCTGCCATAAAGTAGTAATTTTGACAAGTTGCTATTTCATTTTAAATTTATATACCTTGGTATTTAGATTTCATGAATTATGCATTCTGTTTTTGTTTAGCAGTTGAAGGATCAGATAAATTGTGCTCAATAAATTTCCATATCTATGAATACAAAAGTGTGAAATTTTCATTTGAGAAAGACACCTTAAAAATGAGAATTTTGGCCCCCAAAAAAATCCCAACTTTGTATCACATGGTTAGCATTTCAATTCTGTGGGAAGGGACTTCTAGAATAAATTGCTTAGAGGAAAATGCTCGTGTATTTGTTATGTTTTACGATAATGCTTGATTTAATTTTTAATGTTTTGTTATACAGGTTATTTAACGAGTATGAGGATTATGATTATGCAAGGACTGGAAGCGCAGCCTCAGAAAAGGTTGTGGAACACATGACATTTATCGAGTATTCTTTTTAATAAATCTGATTTTTTTTTTACTTTGGTCTTTTCATGACCTTAATATTGTTCTTGTATTTTGAATATGATGAGGGTGCTATGGGGTGTCAACCTAGTTGAGATGTCCGAGTGCTCCTACTGATCCTCTCTCTCTCTCTTTTTCCCATTTCTAGGCCTCTCTATTATTCTCGATGTATAACTGTCTTGTACTTTGAGTTTATTAATAATAGAGAAGTTTGTCTCCTTTTCAAAAAACAAAAAAAACTGATTTTTTTAAGGTGTTGATTCAACAAAAAGGTCCAGTATGATTTTATATAATCTGTGTTATAATATGCATGTACTTGGTGGTTGGATGCTTTATTGAAGTTTAATGCTATTAGGTTGAGCTTAAGGAAGGTCCCCTGGAGCAGTTTAGCCATGAGATGGAACCTTCTCTACGGAAGCTTGGGTTGCCTGTTCGTTTGAATAAGGGTCCGTAAATATACACTTCGTGCCTGCAAGCATTACTTATTTTAAAAAGTTGGTTATAAAGCAGAATTCTTTGTGGAACAGGTGTGGTGGAGCTTGTATCAGACTTCGTTGTATGCGAGGAGGGCAAGTCTCTATCACCAGAGTCAGCCGGAATACTGGTTTGTATCTCTTTGCGACTTGCTCTTTTCTTAAATCTATGTTGACTTTGACATGTGAATGAGGCTCTGTAAGGTTGTTCCAGCAGTGGCGTTTTTCACTTCCAACTCCCATCTCAAATTAAGTGTGGTTTGAAGATGTTTTTGGAATAAGTTCTTTGAGGGAAACAATTTCTATGCACACTTTTTTAATTATAGGCTCTTTTATGTTGCCATTGAGAGAACTGAGCGTCTATAAAAAAAGAACAGGTGGTTCTTTTTTGGCATCGAACAAATTGTCAGGTTCCTTCGGTTTTTGTTCTCTAAGTTTGATTTTTTTATCTAGCAATTTGAAGTTTCGAAGAGAGAACTTCTATTTGGTTCTTCTTTACTGTTTACAACCTTACTTGAGTTATGCATTTGTATAAGTTCTAAAATTTGTAGGCGAGAGCTATATCAATTGACAGTTGGAATTTGAGGCTAAGAGAGAGATTGTACTTTGGCATCGATGTTCGCATGACGATTAAGATGTTTGATTTGATTTGATTTGGTTGCAGCGTGCACTAGGGCTAAGGATGGCAATTTTTCGGCTGAATTTGGTTTGCAGATGGAGCCCCGGTGACTTTGAACTTTACATTGATGGACCAGAAAATTCTGATGTGGAATCTGCCTAA

mRNA sequence

ATGCCCAAGTCGAAGCGTGATAGACCAGTTACTTTATCAAAAACAAAGAAGAAAGGAAGGGACCACAAGAAATCAATGGTGGAATCGATCAGGCAGGCTGTGGAAAATTACAACTCAGTTTTTGTTTTCACTGTTGAGAACATGAGAAACCTCAAATTGTTTTTTGGAGCAAACAAAGTTATGCAAGTTTCTCTTGGGCGAAGTGCTTCTGATGAGATTCGGCCACTTTTGCATGGAAATACTGGACTTTGCTTCACAAACTTACCAAAAGAAGAGGTTGAGAGGTTATTTAACGAGTATGAGGATTATGATTATGCAAGGACTGGAAGCGCAGCCTCAGAAAAGGTTGAGCTTAAGGAAGGTCCCCTGGAGCAGTTTAGCCATGAGATGGAACCTTCTCTACGGAAGCTTGGGTTGCCTGTTCGTTTGAATAAGGGTGTGGTGGAGCTTGTATCAGACTTCGTTGTATGCGAGGAGGGCAAGTCTCTATCACCAGAGTCAGCCGGAATACTGCGTGCACTAGGGCTAAGGATGGCAATTTTTCGGCTGAATTTGGTTTGCAGATGGAGCCCCGGTGACTTTGAACTTTACATTGATGGACCAGAAAATTCTGATGTGGAATCTGCCTAA

Coding sequence (CDS)

ATGCCCAAGTCGAAGCGTGATAGACCAGTTACTTTATCAAAAACAAAGAAGAAAGGAAGGGACCACAAGAAATCAATGGTGGAATCGATCAGGCAGGCTGTGGAAAATTACAACTCAGTTTTTGTTTTCACTGTTGAGAACATGAGAAACCTCAAATTGTTTTTTGGAGCAAACAAAGTTATGCAAGTTTCTCTTGGGCGAAGTGCTTCTGATGAGATTCGGCCACTTTTGCATGGAAATACTGGACTTTGCTTCACAAACTTACCAAAAGAAGAGGTTGAGAGGTTATTTAACGAGTATGAGGATTATGATTATGCAAGGACTGGAAGCGCAGCCTCAGAAAAGGTTGAGCTTAAGGAAGGTCCCCTGGAGCAGTTTAGCCATGAGATGGAACCTTCTCTACGGAAGCTTGGGTTGCCTGTTCGTTTGAATAAGGGTGTGGTGGAGCTTGTATCAGACTTCGTTGTATGCGAGGAGGGCAAGTCTCTATCACCAGAGTCAGCCGGAATACTGCGTGCACTAGGGCTAAGGATGGCAATTTTTCGGCTGAATTTGGTTTGCAGATGGAGCCCCGGTGACTTTGAACTTTACATTGATGGACCAGAAAATTCTGATGTGGAATCTGCCTAA

Protein sequence

MPKSKRDRPVTLSKTKKKGRDHKKSMVESIRQAVENYNSVFVFTVENMRNLKLFFGANKVMQVSLGRSASDEIRPLLHGNTGLCFTNLPKEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRMAIFRLNLVCRWSPGDFELYIDGPENSDVESA

Homology

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BLAST of IVF0019041 vs. ExPASy Swiss-Prot
Match: A4FV84 (mRNA turnover protein 4 homolog OS=Bos taurus OX=9913 GN=MRTO4 PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 7.0e-49
Identity = 109/229 (47.60%), Postives = 142/229 (62.01%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVESIRQAVENYNSVFVFTVENMRNLKL------- 60
           MPKSKRD+ V+L+KT KKG + K++++E +R+ V+ Y  +F+F+V NMRN KL       
Sbjct: 1   MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60

Query: 61  -----FFGANKVMQVSLGRSASDEIRPLLH-------GNTGLCFTNLPKEEVERLFNEYE 120
                FFG NKVM V+LGRS SDE +  LH       G  GL FTN  KEEV+  F +Y 
Sbjct: 61  KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVDEWFTKYT 120

Query: 121 DYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGK 180
           + DYAR G+ A+  V L  GPLEQF H MEP LR+LGLP  L KGVV L+SD+ VC+EG 
Sbjct: 121 EMDYARAGNKATFTVNLDPGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 180

Query: 181 SLSPESAGILRALGLRMAIFRLNLVCRW--SPGDFELYIDGPENSDVES 209
            L+PE A +L+  G  MA F++++   W    G F+   D    S  ES
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVSIKYMWDAQSGRFQQMGDDLPESAPES 229

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BLAST of IVF0019041 vs. ExPASy Swiss-Prot
Match: Q9UKD2 (mRNA turnover protein 4 homolog OS=Homo sapiens OX=9606 GN=MRTO4 PE=1 SV=2)

HSP 1 Score: 193.0 bits (489), Expect = 3.5e-48
Identity = 108/229 (47.16%), Postives = 140/229 (61.14%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVESIRQAVENYNSVFVFTVENMRNLKL------- 60
           MPKSKRD+ V+L+KT KKG + K++++E +R+ V+ Y  +F+F+V NMRN KL       
Sbjct: 1   MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60

Query: 61  -----FFGANKVMQVSLGRSASDEIRPLLH-------GNTGLCFTNLPKEEVERLFNEYE 120
                FFG NKVM V+LGRS SDE +  LH       G  GL FTN  KEEV   F +Y 
Sbjct: 61  KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYT 120

Query: 121 DYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGK 180
           + DYAR G+ A+  V L  GPLEQF H MEP LR+LGLP  L +GVV L+SD+ VC+EG 
Sbjct: 121 EMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD 180

Query: 181 SLSPESAGILRALGLRMAIFRLNLVCRW--SPGDFELYIDGPENSDVES 209
            L+PE A +L+  G  MA F++ +   W    G F+   D    S  ES
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGDDLPESASES 229

[Close]

BLAST of IVF0019041 vs. ExPASy Swiss-Prot
Match: Q9D0I8 (mRNA turnover protein 4 homolog OS=Mus musculus OX=10090 GN=Mrto4 PE=1 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.7e-47
Identity = 108/229 (47.16%), Postives = 140/229 (61.14%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVESIRQAVENYNSVFVFTVENMRNLKL------- 60
           MPKSKRD+ V+L+KT KKG + K++++E +R+ V+ Y  +F+F+V NMRN KL       
Sbjct: 1   MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60

Query: 61  -----FFGANKVMQVSLGRSASDEIRPLLH-------GNTGLCFTNLPKEEVERLFNEYE 120
                FFG NKVM V+LGRS SDE +  LH       G  GL FTN  KEEV   F +Y 
Sbjct: 61  KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYT 120

Query: 121 DYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGK 180
           + D+AR G+ A+  V L  GPL+QF H MEP LR+LGLP  L KGVV L+SD+ VC+EG 
Sbjct: 121 EMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 180

Query: 181 SLSPESAGILRALGLRMAIFRLNLVCRW--SPGDFELYIDGPENSDVES 209
            L+PE A IL+  G  MA F++ +   W    G F+   D    S  ES
Sbjct: 181 VLTPEQARILKLFGYEMAEFKVIIKYMWDAQSGRFQQMDDDLPESAPES 229

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BLAST of IVF0019041 vs. ExPASy Swiss-Prot
Match: Q86HD3 (Ribosome assembly factor mrt4 OS=Dictyostelium discoideum OX=44689 GN=mrt4 PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.3e-34
Identity = 78/215 (36.28%), Postives = 121/215 (56.28%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVESIRQAVENYNSVFVFTVENMRNLKL------- 60
           M KSKR+  V ++K  K   + KK +V +I+  V+ Y  +++FT ENMRN KL       
Sbjct: 1   MVKSKRNVVVNMTKVTKNPGEKKKKLVSTIKDIVDQYKFIYLFTFENMRNNKLKSVRTEW 60

Query: 61  -----FFGANKVMQVSLGRSASDEIRPLLH-------GNTGLCFTNLPKEEVERLFNEYE 120
                 FG NKV+ V LG+S  DE++P LH       G  GL FTN PK++V   F  Y 
Sbjct: 61  STSKFLFGKNKVLSVGLGKSEEDELKPNLHKLTEHLEGECGLFFTNEPKDKVFEYFTNYS 120

Query: 121 DYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGK 180
           + D+ R+G  + E + +KEGP+   +H ME  LR LGLP  L  GV+ +  ++ +CE G 
Sbjct: 121 EKDFPRSGFVSEETITIKEGPIVGMTHSMETYLRGLGLPTTLKNGVIFVDREYTLCEAGV 180

Query: 181 SLSPESAGILRALGLRMAIFRLNLVCRWSPGDFEL 197
           +++PE + +L+     ++ F+ ++   W+  +F L
Sbjct: 181 AVTPEQSQLLKLFNHEISEFKFHIKGFWNEDEFTL 215

[Close]

BLAST of IVF0019041 vs. ExPASy Swiss-Prot
Match: Q7S302 (Ribosome assembly factor mrt4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=mrt4 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.2e-28
Identity = 75/233 (32.19%), Postives = 118/233 (50.64%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVESIRQAVENYNSVFVFTVENMRN---------- 60
           MPKSKR +   L++  KK R+ K+ + E+IR+ + NY   FVF+++NMRN          
Sbjct: 1   MPKSKRAKVYNLTQVTKKNREQKEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKEL 60

Query: 61  --LKLFFGANKVMQVSLGRSAS-------DEIRPLLHGNTGLCFTNLPKEEVERLFNEYE 120
              ++FFG  K+   +LG +         D++   L G+ GL FTN    E++  F    
Sbjct: 61  NDCRIFFGKTKLTARALGTTPEDAQADGLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNLT 120

Query: 121 DYDYARTGSAASEKVELKEGPLEQ------------FSHEMEPSLRKLGLPVRLNKGVVE 180
             D+AR GS A+  + +  GPL               SH +EP LR+LG+P R+ KG V 
Sbjct: 121 QVDFARAGSVATRTITIPSGPLYSTGGEVPAEHDVPVSHTLEPELRRLGMPTRMVKGKVC 180

Query: 181 L------VSDFVVCEEGKSLSPESAGILRALGLRMAIFRLNLVCRWSPGDFEL 197
           L        D+V+C+EG++L      +L+   + ++ FR+ L+  WS    E+
Sbjct: 181 LGDEAGEGDDYVICKEGETLDSRQTRLLKLFSICLSEFRVKLLAYWSAASGEV 233

[Close]

BLAST of IVF0019041 vs. ExPASy TrEMBL
Match: A0A6J1F4Z2 (Ribosome assembly factor mrt4 OS=Cucurbita moschata OX=3662 GN=LOC111440919 PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.1e-100
Identity = 192/229 (83.84%), Postives = 204/229 (89.08%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVESIRQAVENYNSVFVFTVENMRNLK-------- 60
           MPKSKRDRPVTLSKTKKKGR+HKKSMV+ IRQAVENYNS++VFTVENMRNLK        
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60

Query: 61  -----LFFGANKVMQVSLGRSASDEIRP-------LLHGNTGLCFTNLPKEEVERLFNEY 120
                LFFGANKVMQVSLGR+ASDEI+P       LLHGNTGLCFTNLPKEEVERLFNEY
Sbjct: 61  KSSSRLFFGANKVMQVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
            DYDYARTGS A+EKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEG
Sbjct: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180

Query: 181 KSLSPESAGILRALGLRMAIFRLNLVCRWSPGDFELYIDGPENSDVESA 210
           KSLSPESAGILRALG+RMA FRLNLVCRWSPG+FELYIDGP+NSD+E+A
Sbjct: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 229

[Close]

BLAST of IVF0019041 vs. ExPASy TrEMBL
Match: A0A6J1DT71 (Ribosome assembly factor mrt4 OS=Momordica charantia OX=3673 GN=LOC111024162 PE=3 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.4e-100
Identity = 192/229 (83.84%), Postives = 204/229 (89.08%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVESIRQAVENYNSVFVFTVENMRNLK-------- 60
           MPKSKRDRPVTLSKTKKKGR+HKKSMV+ IRQAVENYNS++VFTVENMRNLK        
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60

Query: 61  -----LFFGANKVMQVSLGRSASDEIRP-------LLHGNTGLCFTNLPKEEVERLFNEY 120
                LFFGANKVMQVSLGR+ SDEIRP       LLHGNTGLCFTNLPKEEVERLFNEY
Sbjct: 61  KSTSRLFFGANKVMQVSLGRTVSDEIRPGLHKISKLLHGNTGLCFTNLPKEEVERLFNEY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
           EDYDYARTGS A+EKVELKEGPLEQFSHEMEPSLRKLG+PVRLNKGVVELVSDFVVCEEG
Sbjct: 121 EDYDYARTGSTATEKVELKEGPLEQFSHEMEPSLRKLGMPVRLNKGVVELVSDFVVCEEG 180

Query: 181 KSLSPESAGILRALGLRMAIFRLNLVCRWSPGDFELYIDGPENSDVESA 210
           K+LSPESAGILRALG+RMA FRLNLVCRWSPGDF+LYI+G +NSDVESA
Sbjct: 181 KALSPESAGILRALGIRMASFRLNLVCRWSPGDFQLYIEGLDNSDVESA 229

[Close]

BLAST of IVF0019041 vs. ExPASy TrEMBL
Match: A0A6J1I1E2 (Ribosome assembly factor mrt4 OS=Cucurbita maxima OX=3661 GN=LOC111468997 PE=3 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 9.0e-100
Identity = 191/229 (83.41%), Postives = 203/229 (88.65%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVESIRQAVENYNSVFVFTVENMRNLK-------- 60
           MPKSKRDRPVTLSKTKKKGR+HKKSMV+ IRQAVENYNS++VFTVENMRNLK        
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60

Query: 61  -----LFFGANKVMQVSLGRSASDEIRP-------LLHGNTGLCFTNLPKEEVERLFNEY 120
                LFFGANKVMQVSLGR+ASDEI+P       LLHGNTGLCFTNLPKEEVERLFNEY
Sbjct: 61  KSSSRLFFGANKVMQVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
            DYDYARTGS A+EKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEG
Sbjct: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180

Query: 181 KSLSPESAGILRALGLRMAIFRLNLVCRWSPGDFELYIDGPENSDVESA 210
           KSLSPESAGILRALG+RMA FRLNLVCRWSPG+FELYIDGP+ SD+E+A
Sbjct: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDYSDIETA 229

[Close]

BLAST of IVF0019041 vs. ExPASy TrEMBL
Match: A0A0A0LM77 (Ribosome assembly factor mrt4 OS=Cucumis sativus OX=3659 GN=Csa_2G302060 PE=3 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.9e-87
Identity = 175/207 (84.54%), Postives = 177/207 (85.51%), Query Frame = 0


Query: 26  MVESIRQAVENYNSVFVFTVENMRNLK----------------LFFGANKVMQVSLGRSA 85
           MVE IRQAVENYNSVFVFTVENMRNLK                L   +NKVMQ+SLGRS 
Sbjct: 1   MVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRQVLLPDFSNKVMQISLGRSD 60

Query: 86  SDEIRP-------LLHGNTGLCFTNLPKEEVERLFNEYEDYDYARTGSAASEKVELKEGP 145
           SDEIRP       LLHGNTGLCFTNLPKEEVERLFNEYEDYDYARTGSAASEKVELKEGP
Sbjct: 61  SDEIRPGLHKVSKLLHGNTGLCFTNLPKEEVERLFNEYEDYDYARTGSAASEKVELKEGP 120

Query: 146 LEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRMAIFR 205
           L QFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLR AIFR
Sbjct: 121 LGQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFR 180

Query: 206 LNLVCRWSPGDFELYIDGPENSDVESA 210
           LNLVCRWSPGDFELYIDGPENSDVESA
Sbjct: 181 LNLVCRWSPGDFELYIDGPENSDVESA 207

[Close]

BLAST of IVF0019041 vs. ExPASy TrEMBL
Match: A0A6P4AGB2 (Ribosome assembly factor mrt4 OS=Ziziphus jujuba OX=326968 GN=LOC107427781 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.8e-85
Identity = 164/229 (71.62%), Postives = 190/229 (82.97%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVESIRQAVENYNSVFVFTVENMRNLK-------- 60
           MPKSKRDRPVTLSKTKKKGR+HK+++V +IRQAVE+Y+S++VF  ENMRNLK        
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKEAIVNAIRQAVEDYSSIYVFKFENMRNLKFKEFREKM 60

Query: 61  -----LFFGANKVMQVSLGRSASDEIRP-------LLHGNTGLCFTNLPKEEVERLFNEY 120
                 F G+NKVMQVSLGRSA+DE+RP       LL G+ GLCFTNL KEEVERLFNEY
Sbjct: 61  KSTSRFFLGSNKVMQVSLGRSAADEMRPGIYKVSKLLRGDAGLCFTNLAKEEVERLFNEY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
           EDYD+ RTGS A+EKVELKEGPL+QFSHEMEP LRK G+PVRLNKGVVELV+D+VVCEEG
Sbjct: 121 EDYDFGRTGSIATEKVELKEGPLDQFSHEMEPFLRKQGMPVRLNKGVVELVADYVVCEEG 180

Query: 181 KSLSPESAGILRALGLRMAIFRLNLVCRWSPGDFELYIDGPENSDVESA 210
           K LSPE+A ILR LG++MA FRL+L+CRWSP DFELYID P +SDVES+
Sbjct: 181 KPLSPEAARILRLLGIKMATFRLHLICRWSPSDFELYIDAPGDSDVESS 229

[Close]

BLAST of IVF0019041 vs. NCBI nr
Match: XP_011649395.1 (mRNA turnover protein 4 homolog [Cucumis sativus] >KAE8651976.1 hypothetical protein Csa_005993 [Cucumis sativus])

HSP 1 Score: 388 bits (996), Expect = 3.97e-135
Identity = 204/229 (89.08%), Postives = 205/229 (89.52%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVESIRQAVENYNSVFVFTVENMRNLK-------- 60
           MPKSKRDRPVTLSKTKKKGRDHKKSMVE IRQAVENYNSVFVFTVENMRNLK        
Sbjct: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQL 60

Query: 61  -----LFFGANKVMQVSLGRSASDEIRP-------LLHGNTGLCFTNLPKEEVERLFNEY 120
                LFFGANKVMQ+SLGRS SDEIRP       LLHGNTGLCFTNLPKEEVERLFNEY
Sbjct: 61  KSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
           EDYDYARTGSAASEKVELKEGPL QFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG
Sbjct: 121 EDYDYARTGSAASEKVELKEGPLGQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180

Query: 181 KSLSPESAGILRALGLRMAIFRLNLVCRWSPGDFELYIDGPENSDVESA 209
           KSLSPESAGILRALGLR AIFRLNLVCRWSPGDFELYIDGPENSDVESA
Sbjct: 181 KSLSPESAGILRALGLRTAIFRLNLVCRWSPGDFELYIDGPENSDVESA 229

[Close]

BLAST of IVF0019041 vs. NCBI nr
Match: XP_038902849.1 (mRNA turnover protein 4 homolog [Benincasa hispida])

HSP 1 Score: 382 bits (981), Expect = 7.68e-133
Identity = 199/229 (86.90%), Postives = 206/229 (89.96%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVESIRQAVENYNSVFVFTVENMRNLK-------- 60
           MPKSKRDRPVTLSKTKKKGR+HKKSMVE IRQAVENYNS+FVFTVENMRNLK        
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVELIRQAVENYNSIFVFTVENMRNLKFKELREQL 60

Query: 61  -----LFFGANKVMQVSLGRSASDEIRP-------LLHGNTGLCFTNLPKEEVERLFNEY 120
                LFFGANKVMQVSLGRSAS+EIRP       LLHGNTGLCFTNLPKEEVERLFNEY
Sbjct: 61  KSSSRLFFGANKVMQVSLGRSASNEIRPGLHKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
            DYDYARTGSAA+EKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG
Sbjct: 121 VDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180

Query: 181 KSLSPESAGILRALGLRMAIFRLNLVCRWSPGDFELYIDGPENSDVESA 209
           KSLSPESAGILRALG+RMA FRL+LVCRWSPGDFELYIDGP+NSDVESA
Sbjct: 181 KSLSPESAGILRALGIRMATFRLHLVCRWSPGDFELYIDGPDNSDVESA 229

[Close]

BLAST of IVF0019041 vs. NCBI nr
Match: XP_022933518.1 (mRNA turnover protein 4 homolog [Cucurbita moschata] >KAG6588508.1 mRNA turnover protein 4-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 374 bits (961), Expect = 8.57e-130
Identity = 192/229 (83.84%), Postives = 204/229 (89.08%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVESIRQAVENYNSVFVFTVENMRNLK-------- 60
           MPKSKRDRPVTLSKTKKKGR+HKKSMV+ IRQAVENYNS++VFTVENMRNLK        
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60

Query: 61  -----LFFGANKVMQVSLGRSASDEIRP-------LLHGNTGLCFTNLPKEEVERLFNEY 120
                LFFGANKVMQVSLGR+ASDEI+P       LLHGNTGLCFTNLPKEEVERLFNEY
Sbjct: 61  KSSSRLFFGANKVMQVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
            DYDYARTGS A+EKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEG
Sbjct: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180

Query: 181 KSLSPESAGILRALGLRMAIFRLNLVCRWSPGDFELYIDGPENSDVESA 209
           KSLSPESAGILRALG+RMA FRLNLVCRWSPG+FELYIDGP+NSD+E+A
Sbjct: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 229

[Close]

BLAST of IVF0019041 vs. NCBI nr
Match: XP_022157470.1 (mRNA turnover protein 4 homolog [Momordica charantia])

HSP 1 Score: 373 bits (958), Expect = 2.46e-129
Identity = 192/229 (83.84%), Postives = 204/229 (89.08%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVESIRQAVENYNSVFVFTVENMRNLK-------- 60
           MPKSKRDRPVTLSKTKKKGR+HKKSMV+ IRQAVENYNS++VFTVENMRNLK        
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60

Query: 61  -----LFFGANKVMQVSLGRSASDEIRP-------LLHGNTGLCFTNLPKEEVERLFNEY 120
                LFFGANKVMQVSLGR+ SDEIRP       LLHGNTGLCFTNLPKEEVERLFNEY
Sbjct: 61  KSTSRLFFGANKVMQVSLGRTVSDEIRPGLHKISKLLHGNTGLCFTNLPKEEVERLFNEY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
           EDYDYARTGS A+EKVELKEGPLEQFSHEMEPSLRKLG+PVRLNKGVVELVSDFVVCEEG
Sbjct: 121 EDYDYARTGSTATEKVELKEGPLEQFSHEMEPSLRKLGMPVRLNKGVVELVSDFVVCEEG 180

Query: 181 KSLSPESAGILRALGLRMAIFRLNLVCRWSPGDFELYIDGPENSDVESA 209
           K+LSPESAGILRALG+RMA FRLNLVCRWSPGDF+LYI+G +NSDVESA
Sbjct: 181 KALSPESAGILRALGIRMASFRLNLVCRWSPGDFQLYIEGLDNSDVESA 229

[Close]

BLAST of IVF0019041 vs. NCBI nr
Match: XP_023529350.1 (mRNA turnover protein 4 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 373 bits (957), Expect = 3.49e-129
Identity = 191/229 (83.41%), Postives = 204/229 (89.08%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVESIRQAVENYNSVFVFTVENMRNLK-------- 60
           MPKSKRDRPVTLSKTKKKGR+HKKSMV+ IRQAVENYNS++VFTVENMRNLK        
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60

Query: 61  -----LFFGANKVMQVSLGRSASDEIRP-------LLHGNTGLCFTNLPKEEVERLFNEY 120
                LFFGANKVMQVSLGR+AS+EI+P       LLHGNTGLCFTNLPKEEVERLFNEY
Sbjct: 61  KSSSRLFFGANKVMQVSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
            DYDYARTGS A+EKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEG
Sbjct: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180

Query: 181 KSLSPESAGILRALGLRMAIFRLNLVCRWSPGDFELYIDGPENSDVESA 209
           KSLSPESAGILRALG+RMA FRLNLVCRWSPG+FELYIDGP+NSD+E+A
Sbjct: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 229

[Close]

BLAST of IVF0019041 vs. TAIR 10
Match: AT1G25260.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 282.0 bits (720), Expect = 4.0e-76
Identity = 146/217 (67.28%), Postives = 170/217 (78.34%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVESIRQAVENYNSVFVFTVENMRNL--------- 60
           MPKSKRDRPVTLSKTKKKGR+HK+ +V  IR+AVE Y+SV+VF+ ENMRN+         
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKECIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQF 60

Query: 61  ----KLFFGANKVMQVSLGRSASDEIR-------PLLHGNTGLCFTNLPKEEVERLFNEY 120
               K F G+NKVMQV+LGRSA DE+R        LL G+TGL  T++PKEEVE LFN Y
Sbjct: 61  RHNGKFFLGSNKVMQVALGRSAEDELRSGIYKVSKLLRGDTGLLVTDMPKEEVESLFNAY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
           ED D++RTGS A E VELKEGPLEQF+HEMEP LRKL +PVRLNKG VELV+DFVVCEEG
Sbjct: 121 EDSDFSRTGSIAVETVELKEGPLEQFTHEMEPLLRKLEMPVRLNKGTVELVADFVVCEEG 180

Query: 181 KSLSPESAGILRALGLRMAIFRLNLVCRWSPGDFELY 198
           K LSP+SA ILR L ++MA F+LNL+CRWSP DFELY
Sbjct: 181 KQLSPKSAHILRLLRMKMATFKLNLLCRWSPSDFELY 217

[Close]

BLAST of IVF0019041 vs. TAIR 10
Match: AT3G09200.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 58.5 bits (140), Expect = 7.2e-09
Identity = 44/170 (25.88%), Postives = 77/170 (45.29%), Query Frame = 0


Query: 32  QAVENYNSVFVFTVENMRNLKL-------------FFGANKVMQVSL-------GRSASD 91
           Q ++ Y  + V   +N+ + +L               G N +M+ S+       G +A  
Sbjct: 19  QLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENTGNTAIL 78

Query: 92  EIRPLLHGNTGLCFTNLPKEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEME 151
            + PLL GN GL FT    +EV     +Y+    AR G  A   V ++ G     +  ++
Sbjct: 79  NLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPG-----NTGLD 138

Query: 152 PS----LRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLR 178
           PS     + L +P ++NKG VE+++   + ++G  +    A +L  LG+R
Sbjct: 139 PSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIR 183

[Close]

BLAST of IVF0019041 vs. TAIR 10
Match: AT3G11250.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 58.5 bits (140), Expect = 7.2e-09
Identity = 44/170 (25.88%), Postives = 77/170 (45.29%), Query Frame = 0


Query: 32  QAVENYNSVFVFTVENMRNLKL-------------FFGANKVMQVSL-------GRSASD 91
           Q ++ Y  + V   +N+ + +L               G N +M+ S+       G +A  
Sbjct: 19  QLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENSGNTAIL 78

Query: 92  EIRPLLHGNTGLCFTNLPKEEVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEME 151
            + PLL GN GL FT    +EV     +Y+    AR G  A   V ++ G     +  ++
Sbjct: 79  NLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPG-----NTGLD 138

Query: 152 PS----LRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLR 178
           PS     + L +P ++NKG VE+++   + ++G  +    A +L  LG+R
Sbjct: 139 PSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIR 183

[Close]

BLAST of IVF0019041 vs. TAIR 10
Match: AT3G09200.2 (Ribosomal protein L10 family protein )

HSP 1 Score: 55.5 bits (132), Expect = 6.1e-08
Identity = 39/150 (26.00%), Postives = 69/150 (46.00%), Query Frame = 0


Query: 32  QAVENYNSVFVFTVENMRNLKLFFGANKVMQVSLGRSASDEIRPLLHGNTGLCFTNLPKE 91
           Q ++ Y  + V +V             ++   + G +A   + PLL GN GL FT    +
Sbjct: 19  QLIDEYTQILVRSV-------------RIHSENTGNTAILNLLPLLQGNVGLIFTKGDLK 78

Query: 92  EVERLFNEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGV 151
           EV     +Y+    AR G  A   V ++ G     +  ++PS     + L +P ++NKG 
Sbjct: 79  EVSEEVAKYKVGAPARVGLVAPIDVVVQPG-----NTGLDPSQTSFFQVLNIPTKINKGT 138

Query: 152 VELVSDFVVCEEGKSLSPESAGILRALGLR 178
           VE+++   + ++G  +    A +L  LG+R
Sbjct: 139 VEIITPVELIKQGDKVGSSEAALLAKLGIR 150

The following BLAST results are available for this feature:

BLAST of IVF0019041 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4FV84	7.0e-49	47.60	mRNA turnover protein 4 homolog OS=Bos taurus OX=9913 GN=MRTO4 PE=2 SV=1	[more]
Q9UKD2	3.5e-48	47.16	mRNA turnover protein 4 homolog OS=Homo sapiens OX=9606 GN=MRTO4 PE=1 SV=2	[more]
Q9D0I8	1.7e-47	47.16	mRNA turnover protein 4 homolog OS=Mus musculus OX=10090 GN=Mrto4 PE=1 SV=1	[more]
Q86HD3	6.3e-34	36.28	Ribosome assembly factor mrt4 OS=Dictyostelium discoideum OX=44689 GN=mrt4 PE=3 ...	[more]
Q7S302	5.2e-28	32.19	Ribosome assembly factor mrt4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-...	[more]

BLAST of IVF0019041 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4Z2	1.1e-100	83.84	Ribosome assembly factor mrt4 OS=Cucurbita moschata OX=3662 GN=LOC111440919 PE=3...	[more]
A0A6J1DT71	2.4e-100	83.84	Ribosome assembly factor mrt4 OS=Momordica charantia OX=3673 GN=LOC111024162 PE=...	[more]
A0A6J1I1E2	9.0e-100	83.41	Ribosome assembly factor mrt4 OS=Cucurbita maxima OX=3661 GN=LOC111468997 PE=3 S...	[more]
A0A0A0LM77	3.9e-87	84.54	Ribosome assembly factor mrt4 OS=Cucumis sativus OX=3659 GN=Csa_2G302060 PE=3 SV...	[more]
A0A6P4AGB2	4.8e-85	71.62	Ribosome assembly factor mrt4 OS=Ziziphus jujuba OX=326968 GN=LOC107427781 PE=3 ...	[more]

BLAST of IVF0019041 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649395.1	3.97e-135	89.08	mRNA turnover protein 4 homolog [Cucumis sativus] >KAE8651976.1 hypothetical pro...	[more]
XP_038902849.1	7.68e-133	86.90	mRNA turnover protein 4 homolog [Benincasa hispida]	[more]
XP_022933518.1	8.57e-130	83.84	mRNA turnover protein 4 homolog [Cucurbita moschata] >KAG6588508.1 mRNA turnover...	[more]
XP_022157470.1	2.46e-129	83.84	mRNA turnover protein 4 homolog [Momordica charantia]	[more]
XP_023529350.1	3.49e-129	83.41	mRNA turnover protein 4 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0019041 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G25260.1	4.0e-76	67.28	Ribosomal protein L10 family protein	[more]
AT3G09200.1	7.2e-09	25.88	Ribosomal protein L10 family protein	[more]
AT3G11250.1	7.2e-09	25.88	Ribosomal protein L10 family protein	[more]
AT3G09200.2	6.1e-08	26.00	Ribosomal protein L10 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040637	60S ribosomal protein L10P, insertion domain	PFAM	PF17777	RL10P_insert	coord: 106..175 e-value: 4.2E-22 score: 78.0
IPR043164	50S ribosomal protein L10, insertion domain superfamily	GENE3D	3.90.105.20		coord: 105..178 e-value: 2.6E-50 score: 172.5
IPR043141	Ribosomal protein L10-like domain superfamily	GENE3D	3.30.70.1730		coord: 30..190 e-value: 2.6E-50 score: 172.5
IPR043141	Ribosomal protein L10-like domain superfamily	SUPERFAMILY	160369	Ribosomal protein L10-like	coord: 20..124
IPR001790	Ribosomal protein L10P	PFAM	PF00466	Ribosomal_L10	coord: 51..100 e-value: 3.7E-5 score: 23.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR45841	MRNA TURNOVER PROTEIN 4 MRTO4	coord: 1..208
None	No IPR available	PANTHER	PTHR45841:SF4	RIBOSOME ASSEMBLY FACTOR MRT4	coord: 1..208
IPR033867	Ribosome assembly factor Mrt4	CDD	cd05796	Ribosomal_P0_like	coord: 21..164 e-value: 4.74843E-71 score: 211.668

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0019041.2	IVF0019041.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000956	nuclear-transcribed mRNA catabolic process
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor