IVF0019036 (gene) Melon (IVF77) v1

Overview


Name	IVF0019036
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	30S ribosomal protein S3, chloroplastic
Location	tig00000662: 69067 .. 70308 (+)
RNA-Seq Expression	IVF0019036
Synteny	IVF0019036

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGAAAAATGATAATAGACCTCGTCGTTAATAATTAATATTATGAAAAAAAAAGTGAATAGTGAATATAGATACCTATCGTTCATTACTAAGAGGTAAACCTTATGATAAAGAAGAGAAAAAAAAATCAATCTGAAGTATACGCTTTAGGTCAACATATATGTATGTCCCCTCACAAAGCGCGAAGAGTAATTGATCAGATTCGTGGACGTTCCTACGAAGAAACAATGATGATACTCGAACTCATGCCTTATCGAACATGTTATGCAATTTTAAAATTGGTTTATTCGGCAGCAGCAAATGCTAGCCACAATATGGGTTTCAACGAAAGAGATTTAGTCATTAGTAAAGCAGAGGTCAATCAAGGTACTACTGTGAAAAAATTAAAACCTCGAGCTAGAGGGCGAAGTTATCCCATAAAACGACCCACTTGTTCTATAACTATTGTATTGAAAAATACATCTGTGAATAAAGAAGAATTTAAAAGATACCAATACACCATAAACAAACCTGGTGGATTGATAACTAAAGAAAAGTACACAGATATGACGTGTTATGAGATGTATACTAATGGGGGATTATGGGACAAAAAATAAATCCACTCGGTTTTAGACTTGGTGCAACCCAAGGGCATCATTCTCTGTGGTTTGCACACCCCAAAAAATATTCTGAAGGTTTACAAGAAGATCAAAAAATACGAGATTGTATCCGGAATTATGTACAAAAAAACATGAGAATATTTTCTGGTGTTGAAGGAATTGCACGTATCGAGATTCAAAAAAGAATTGATCTTATTCAAGTGATAATCTTTATGGGATTCCCAAAGTTATTAATAGAAGGTGGGTCTCGAAAAATCGAAGAATTACAGATGAATGTACAAAAAGAATTAAATTCTGGGAACCGAAAACTTAACATTGCTATTACAAGAATAGGAAACCCTTATGGACACCCTAATATTCTCGCAGAATTTATAGCCGGACAATTAAAGAATAGAGTTTCATTTCGCAAAGCAATGAAAAAAGCTATTGAATTAACTGAACAGGCGGGTACAAAGGGAATTCAAGTACAAATTGCCGGACGTATAGACGGAAAAGAAATTGCACGTGTCGAATGGATCAGAGAAGGACGGGTTCCTCTACAAACCATTCGAGCTAAAATTGATTATTGTTGCTATCCAGTTCGAACTATCTATGGGGTATTAGGCATCAAAATTTGGATATTTGTAGACGAGCAATAATAAGC

mRNA sequence

TGTGAAAAATGATAATAGACCTCGTCGTTAATAATTAATATTATGAAAAAAAAAGTGAATAGTGAATATAGATACCTATCGTTCATTACTAAGAGGTAAACCTTATGATAAAGAAGAGAAAAAAAAATCAATCTGAAGTATACGCTTTAGGTCAACATATATGTATGTCCCCTCACAAAGCGCGAAGAGTAATTGATCAGATTCGTGGACGTTCCTACGAAGAAACAATGATGATACTCGAACTCATGCCTTATCGAACATGTTATGCAATTTTAAAATTGGTTTATTCGGCAGCAGCAAATGCTAGCCACAATATGGGTTTCAACGAAAGAGATTTAGTCATTAGTAAAGCAGAGGTCAATCAAGGTACTACTGTGAAAAAATTAAAACCTCGAGCTAGAGGGCGAAGTTATCCCATAAAACGACCCACTTGTTCTATAACTATTGTATTGAAAAATACATCTGTGAATAAAGAAGAATTTAAAAGATACCAATACACCATAAACAAACCTGGTGGATTGATAACTAAAGAAAAGTACACAGATATGACGTGTTATGAGATGTATACTAATGGGGGATTATGGGACAAAAAATAAATCCACTCGGTTTTAGACTTGGTGCAACCCAAGGGCATCATTCTCTGTGGTTTGCACACCCCAAAAAATATTCTGAAGGTTTACAAGAAGATCAAAAAATACGAGATTGTATCCGGAATTATGTACAAAAAAACATGAGAATATTTTCTGGTGTTGAAGGAATTGCACGTATCGAGATTCAAAAAAGAATTGATCTTATTCAAGTGATAATCTTTATGGGATTCCCAAAGTTATTAATAGAAGGTGGGTCTCGAAAAATCGAAGAATTACAGATGAATGTACAAAAAGAATTAAATTCTGGGAACCGAAAACTTAACATTGCTATTACAAGAATAGGAAACCCTTATGGACACCCTAATATTCTCGCAGAATTTATAGCCGGACAATTAAAGAATAGAGTTTCATTTCGCAAAGCAATGAAAAAAGCTATTGAATTAACTGAACAGGCGGGTACAAAGGGAATTCAAGTACAAATTGCCGGACGTATAGACGGAAAAGAAATTGCACGTGTCGAATGGATCAGAGAAGGACGGGTTCCTCTACAAACCATTCGAGCTAAAATTGATTATTGTTGCTATCCAGTTCGAACTATCTATGGGGTATTAGGCATCAAAATTTGGATATTTGTAGACGAGCAATAATAAGC

Coding sequence (CDS)

ATGGGACAAAAAATAAATCCACTCGGTTTTAGACTTGGTGCAACCCAAGGGCATCATTCTCTGTGGTTTGCACACCCCAAAAAATATTCTGAAGGTTTACAAGAAGATCAAAAAATACGAGATTGTATCCGGAATTATGTACAAAAAAACATGAGAATATTTTCTGGTGTTGAAGGAATTGCACGTATCGAGATTCAAAAAAGAATTGATCTTATTCAAGTGATAATCTTTATGGGATTCCCAAAGTTATTAATAGAAGGTGGGTCTCGAAAAATCGAAGAATTACAGATGAATGTACAAAAAGAATTAAATTCTGGGAACCGAAAACTTAACATTGCTATTACAAGAATAGGAAACCCTTATGGACACCCTAATATTCTCGCAGAATTTATAGCCGGACAATTAAAGAATAGAGTTTCATTTCGCAAAGCAATGAAAAAAGCTATTGAATTAACTGAACAGGCGGGTACAAAGGGAATTCAAGTACAAATTGCCGGACGTATAGACGGAAAAGAAATTGCACGTGTCGAATGGATCAGAGAAGGACGGGTTCCTCTACAAACCATTCGAGCTAAAATTGATTATTGTTGCTATCCAGTTCGAACTATCTATGGGGTATTAGGCATCAAAATTTGGATATTTGTAGACGAGCAATAA

Protein sequence

MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ

Homology

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BLAST of IVF0019036 vs. ExPASy Swiss-Prot
Match: Q4VZN0 (30S ribosomal protein S3, chloroplastic OS=Cucumis sativus OX=3659 GN=rps3 PE=3 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 7.9e-120
Identity = 211/218 (96.79%), Postives = 216/218 (99.08%), Query Frame = 0


Query: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60
           MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCI+NYVQKNMRIFSGVEGI
Sbjct: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIQNYVQKNMRIFSGVEGI 60

Query: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120
           ARIEIQKRIDLIQVIIFMGFPKL+I+ GSRKIEELQ+NVQKE NSGNRKLNIAITRIGNP
Sbjct: 61  ARIEIQKRIDLIQVIIFMGFPKLVIDDGSRKIEELQINVQKEFNSGNRKLNIAITRIGNP 120

Query: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180
           YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180

Query: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 219
           EGRVPLQTIRAKIDYCCYPVRTIYG+LGIKIWIFVDEQ
Sbjct: 181 EGRVPLQTIRAKIDYCCYPVRTIYGILGIKIWIFVDEQ 218

[Close]

BLAST of IVF0019036 vs. ExPASy Swiss-Prot
Match: Q0ZIY0 (30S ribosomal protein S3, chloroplastic OS=Vitis vinifera OX=29760 GN=rps3 PE=3 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 8.2e-109
Identity = 196/218 (89.91%), Postives = 205/218 (94.04%), Query Frame = 0


Query: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60
           MGQKINPLGFRLG TQGHHSLWFA PK YS+GLQEDQKIRDCI+NYVQKN+RI SGVEGI
Sbjct: 1   MGQKINPLGFRLGTTQGHHSLWFAQPKNYSKGLQEDQKIRDCIKNYVQKNIRISSGVEGI 60

Query: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120
           ARIEIQKRIDLIQVII+MGFPKLL+EG  R+IEELQMNVQKELN  NRKLNIAITRI  P
Sbjct: 61  ARIEIQKRIDLIQVIIYMGFPKLLVEGKPRRIEELQMNVQKELNYVNRKLNIAITRITKP 120

Query: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180
           YGHPNILAEFIAGQL+NRVSFRKA+KKAIELTEQA TKGIQVQIAGRIDGKEIARVEWIR
Sbjct: 121 YGHPNILAEFIAGQLRNRVSFRKAIKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180

Query: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 219
           EGRVPLQTIRAKIDYC Y VRTIYGVLGIKIWIFVDE+
Sbjct: 181 EGRVPLQTIRAKIDYCSYRVRTIYGVLGIKIWIFVDEE 218

[Close]

BLAST of IVF0019036 vs. ExPASy Swiss-Prot
Match: A0ZZ73 (30S ribosomal protein S3, chloroplastic OS=Gossypium barbadense OX=3634 GN=rps3 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 1.8e-108
Identity = 194/218 (88.99%), Postives = 204/218 (93.58%), Query Frame = 0


Query: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60
           MGQKINPLGFRLG TQ HHSLWFA PKKYSEGLQED+KIRDCI+NYVQKN R+ SGVEGI
Sbjct: 1   MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLQEDKKIRDCIKNYVQKNTRLSSGVEGI 60

Query: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120
           ARIEIQKR+DLIQVII+MGFPKLLIE   RK+EELQMNVQKELN  NRKLNIAITRIGNP
Sbjct: 61  ARIEIQKRLDLIQVIIYMGFPKLLIEDKPRKLEELQMNVQKELNCMNRKLNIAITRIGNP 120

Query: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180
           YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQA TKGIQ+QIAGRIDGKEIARVEWIR
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180

Query: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 219
           EGRVPLQTI AKI+YC Y VRTIYGVLGIKIWIF+DE+
Sbjct: 181 EGRVPLQTIGAKIEYCSYRVRTIYGVLGIKIWIFIDEE 218

[Close]

BLAST of IVF0019036 vs. ExPASy Swiss-Prot
Match: Q2L946 (30S ribosomal protein S3, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rps3 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 1.8e-108
Identity = 194/218 (88.99%), Postives = 204/218 (93.58%), Query Frame = 0


Query: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60
           MGQKINPLGFRLG TQ HHSLWFA PKKYSEGLQED+KIRDCI+NYVQKN R+ SGVEGI
Sbjct: 1   MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLQEDKKIRDCIKNYVQKNTRLSSGVEGI 60

Query: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120
           ARIEIQKR+DLIQVII+MGFPKLLIE   RK+EELQMNVQKELN  NRKLNIAITRIGNP
Sbjct: 61  ARIEIQKRLDLIQVIIYMGFPKLLIEDKPRKLEELQMNVQKELNCMNRKLNIAITRIGNP 120

Query: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180
           YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQA TKGIQ+QIAGRIDGKEIARVEWIR
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180

Query: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 219
           EGRVPLQTI AKI+YC Y VRTIYGVLGIKIWIF+DE+
Sbjct: 181 EGRVPLQTIGAKIEYCSYRVRTIYGVLGIKIWIFIDEE 218

[Close]

BLAST of IVF0019036 vs. ExPASy Swiss-Prot
Match: A6MM75 (30S ribosomal protein S3, chloroplastic OS=Buxus microphylla OX=153571 GN=rps3 PE=3 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.2e-107
Identity = 195/218 (89.45%), Postives = 201/218 (92.20%), Query Frame = 0


Query: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60
           MGQKINPLGFRLG TQGHHSLWFA PK YSEGLQEDQKIRDCI+NYVQKNMRI SG EGI
Sbjct: 1   MGQKINPLGFRLGTTQGHHSLWFAQPKSYSEGLQEDQKIRDCIKNYVQKNMRISSGAEGI 60

Query: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120
           ARIEIQKRIDLIQVII+MGFPKLLIEG  R +EELQ+NVQKE NS NRKLNIAITRI  P
Sbjct: 61  ARIEIQKRIDLIQVIIYMGFPKLLIEGRPRGVEELQINVQKEFNSVNRKLNIAITRIAKP 120

Query: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180
           YG PNILAEFIAGQLKNRVSFRKAMKKAIELTEQA TKGIQ+QIAGRIDGKEIARVEWIR
Sbjct: 121 YGQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180

Query: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 219
           EGRVPLQTIRAKI YC Y VRTIYGVLGIKIWIFVDE+
Sbjct: 181 EGRVPLQTIRAKIYYCSYTVRTIYGVLGIKIWIFVDEE 218

[Close]

BLAST of IVF0019036 vs. ExPASy TrEMBL
Match: A0A1S4EU44 (30S ribosomal protein S3, chloroplastic OS=Cucumis melo OX=3656 GN=rps3 PE=3 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 2.8e-120
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60
           MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI
Sbjct: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60

Query: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120
           ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP
Sbjct: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120

Query: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180
           YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180

Query: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 219
           EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ
Sbjct: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 218

[Close]

BLAST of IVF0019036 vs. ExPASy TrEMBL
Match: A0A249RZG7 (30S ribosomal protein S3, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=rps3 PE=3 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 2.8e-120
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60
           MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI
Sbjct: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60

Query: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120
           ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP
Sbjct: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120

Query: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180
           YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180

Query: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 219
           EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ
Sbjct: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 218

[Close]

BLAST of IVF0019036 vs. ExPASy TrEMBL
Match: A0A249RXQ1 (30S ribosomal protein S3, chloroplastic OS=Cucumis melo subsp. agrestis OX=217619 GN=rps3 PE=3 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 2.8e-120
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60
           MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI
Sbjct: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60

Query: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120
           ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP
Sbjct: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120

Query: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180
           YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180

Query: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 219
           EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ
Sbjct: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 218

[Close]

BLAST of IVF0019036 vs. ExPASy TrEMBL
Match: A0A286NFY0 (30S ribosomal protein S3, chloroplastic OS=Cucumis melo var. flexuosus OX=1120798 GN=rps3 PE=3 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 2.8e-120
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60
           MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI
Sbjct: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60

Query: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120
           ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP
Sbjct: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120

Query: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180
           YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180

Query: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 219
           EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ
Sbjct: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 218

[Close]

BLAST of IVF0019036 vs. ExPASy TrEMBL
Match: A0A249RYX6 (30S ribosomal protein S3, chloroplastic OS=Cucumis melo var. dudaim OX=2034236 GN=rps3 PE=3 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 2.8e-120
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60
           MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI
Sbjct: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60

Query: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120
           ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP
Sbjct: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120

Query: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180
           YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180

Query: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 219
           EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ
Sbjct: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 218

[Close]

BLAST of IVF0019036 vs. NCBI nr
Match: YP_004841822.1 (ribosomal protein S3 [Cucumis melo subsp. melo] >YP_009860112.1 ribosomal protein S3 [Cucumis melo subsp. agrestis] >ASY96586.1 ribosomal protein S3 [Cucumis melo var. conomon] >ASY96673.1 ribosomal protein S3 [Cucumis melo var. makuwa] >ASY96760.1 ribosomal protein S3 [Cucumis melo var. momordica] >ASY96847.1 ribosomal protein S3 [Cucumis melo var. dudaim] >ASY96934.1 ribosomal protein S3 [Cucumis melo var. cantalupo] >ASY97108.1 ribosomal protein S3 [Cucumis melo var. inodorus] >ASY97282.1 ribosomal protein S3 [Cucumis melo var. flexuosus] >QJF46423.1 ribosomal protein S3 [Cucumis melo])

HSP 1 Score: 441 bits (1134), Expect = 3.53e-156
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60
           MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI
Sbjct: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60

Query: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120
           ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP
Sbjct: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120

Query: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180
           YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180

Query: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 218
           EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ
Sbjct: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 218

[Close]

BLAST of IVF0019036 vs. NCBI nr
Match: YP_009456184.1 (ribosomal protein S3 [Lagenaria siceraria] >YP_010131132.1 ribosomal protein S3 [Benincasa hispida] >QNM38569.1 ribosomal protein S3 [Lagenaria siceraria var. microcarpa] >AHM88705.1 ribosomal protein S3 [Lagenaria siceraria] >AHM88995.1 ribosomal protein S3 [Lagenaria siceraria] >AHM89054.1 ribosomal protein S3 [Lagenaria siceraria] >AHM89113.1 ribosomal protein S3 [Lagenaria siceraria])

HSP 1 Score: 439 bits (1130), Expect = 1.44e-155
Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60
           MGQKINPLGFRLGATQGHHSLWFAHP+KYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI
Sbjct: 1   MGQKINPLGFRLGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60

Query: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120
           ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP
Sbjct: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120

Query: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180
           YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180

Query: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 218
           EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ
Sbjct: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 218

[Close]

BLAST of IVF0019036 vs. NCBI nr
Match: AHM88937.1 (ribosomal protein S3 [Lagenaria siceraria])

HSP 1 Score: 439 bits (1130), Expect = 1.49e-155
Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60
           MGQKINPLGFRLGATQGHHSLWFAHP+KYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI
Sbjct: 1   MGQKINPLGFRLGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60

Query: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120
           ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP
Sbjct: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120

Query: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180
           YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180

Query: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 218
           EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ
Sbjct: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 218

[Close]

BLAST of IVF0019036 vs. NCBI nr
Match: YP_009326028.1 (ribosomal protein S3 [Citrullus lanatus] >YP_009348070.1 ribosomal protein S3 [Citrullus mucosospermus] >YP_009420833.1 ribosomal protein S3 [Citrullus colocynthis] >YP_009431595.1 ribosomal protein S3 [Citrullus amarus] >YP_009431681.1 ribosomal protein S3 [Citrullus rehmii] >APW82501.1 ribosomal protein S3 [Citrullus lanatus subsp. vulgaris] >QZL38720.1 ribosomal protein S3 [Citrullus ecirrhosus] >APD52519.1 ribosomal protein S3 [Citrullus lanatus] >APW82586.1 ribosomal protein S3 [Citrullus lanatus subsp. vulgaris] >APW82671.1 ribosomal protein S3 [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 439 bits (1129), Expect = 2.04e-155
Identity = 216/218 (99.08%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60
           MGQKINPLGFRLGATQGHHSLWFAHP+KYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI
Sbjct: 1   MGQKINPLGFRLGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60

Query: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120
           ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP
Sbjct: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120

Query: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180
           YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQ+QIAGRIDGKEIARVEWIR
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIR 180

Query: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 218
           EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ
Sbjct: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 218

[Close]

BLAST of IVF0019036 vs. NCBI nr
Match: ASY96325.1 (ribosomal protein S3 [Cucumis melo subsp. agrestis])

HSP 1 Score: 438 bits (1127), Expect = 4.13e-155
Identity = 217/218 (99.54%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60
           MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI
Sbjct: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60

Query: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120
           ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP
Sbjct: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120

Query: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180
           YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180

Query: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 218
           EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIF DEQ
Sbjct: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFGDEQ 218

[Close]

BLAST of IVF0019036 vs. TAIR 10
Match: ATCG00800.1 (structural constituent of ribosome )

HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-108
Identity = 193/218 (88.53%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 1   MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI 60
           MGQKINPLGFRLG TQ HHSLWFA PKKYSEGL+ED+KIRDCI+NYVQKN+RI SG+EGI
Sbjct: 1   MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLEEDKKIRDCIKNYVQKNIRISSGMEGI 60

Query: 61  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNP 120
           ARIEIQKRIDLIQ+II+MGFPKLLIE   R++EELQMNVQKELN  NRKLNIAITRI NP
Sbjct: 61  ARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRISNP 120

Query: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180
           YG PNILAEFIAGQLKNRVSFRKAMKKAIELTEQA TKGIQVQIAGRIDGKEIARVEWIR
Sbjct: 121 YGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180

Query: 181 EGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ 219
           EGRVPLQTI AKIDYC Y VRTIYGVLGIKIWIFVDE+
Sbjct: 181 EGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218

[Close]

BLAST of IVF0019036 vs. TAIR 10
Match: ATMG00090.1 (structural constituent of ribosome;protein binding )

HSP 1 Score: 52.8 bits (125), Expect = 4.1e-07
Identity = 36/112 (32.14%), Postives = 57/112 (50.89%), Query Frame = 0


Query: 104 NSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKN-RVSFRKAMKKAIELTEQAGTKGIQV 163
           N  N K  I   +I + Y   + +A+ I+ QLKN R SF     K ++   + G +GI++
Sbjct: 429 NRTNTKTLIESVKIKSVYQSASPIAQDISFQLKNKRRSFHSIFAKIVKEIPK-GVEGIRI 488

Query: 164 QIAGRI-DGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWI 214
             +GR+ D  E A+ +  +  +        KIDY    V T YG+ G+K+WI
Sbjct: 489 CFSGRLKDAAEKAQTKCYKHRKTSRNVFNHKIDYAPAEVSTRYGISGVKVWI 539

The following BLAST results are available for this feature:

BLAST of IVF0019036 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZN0	7.9e-120	96.79	30S ribosomal protein S3, chloroplastic OS=Cucumis sativus OX=3659 GN=rps3 PE=3 ...	[more]
Q0ZIY0	8.2e-109	89.91	30S ribosomal protein S3, chloroplastic OS=Vitis vinifera OX=29760 GN=rps3 PE=3 ...	[more]
A0ZZ73	1.8e-108	88.99	30S ribosomal protein S3, chloroplastic OS=Gossypium barbadense OX=3634 GN=rps3 ...	[more]
Q2L946	1.8e-108	88.99	30S ribosomal protein S3, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rps3 PE...	[more]
A6MM75	1.2e-107	89.45	30S ribosomal protein S3, chloroplastic OS=Buxus microphylla OX=153571 GN=rps3 P...	[more]

BLAST of IVF0019036 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4EU44	2.8e-120	100.00	30S ribosomal protein S3, chloroplastic OS=Cucumis melo OX=3656 GN=rps3 PE=3 SV=...	[more]
A0A249RZG7	2.8e-120	100.00	30S ribosomal protein S3, chloroplastic OS=Cucumis melo var. cantalupensis OX=36...	[more]
A0A249RXQ1	2.8e-120	100.00	30S ribosomal protein S3, chloroplastic OS=Cucumis melo subsp. agrestis OX=21761...	[more]
A0A286NFY0	2.8e-120	100.00	30S ribosomal protein S3, chloroplastic OS=Cucumis melo var. flexuosus OX=112079...	[more]
A0A249RYX6	2.8e-120	100.00	30S ribosomal protein S3, chloroplastic OS=Cucumis melo var. dudaim OX=2034236 G...	[more]

BLAST of IVF0019036 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_004841822.1	3.53e-156	100.00	ribosomal protein S3 [Cucumis melo subsp. melo] >YP_009860112.1 ribosomal protei...	[more]
YP_009456184.1	1.44e-155	99.54	ribosomal protein S3 [Lagenaria siceraria] >YP_010131132.1 ribosomal protein S3 ...	[more]
AHM88937.1	1.49e-155	99.54	ribosomal protein S3 [Lagenaria siceraria]	[more]
YP_009326028.1	2.04e-155	99.08	ribosomal protein S3 [Citrullus lanatus] >YP_009348070.1 ribosomal protein S3 [C...	[more]
ASY96325.1	4.13e-155	99.54	ribosomal protein S3 [Cucumis melo subsp. agrestis]	[more]

BLAST of IVF0019036 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00800.1	1.1e-108	88.53	structural constituent of ribosome	[more]
ATMG00090.1	4.1e-07	32.14	structural constituent of ribosome;protein binding	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	GENE3D	3.30.1140.32		coord: 119..218 e-value: 1.4E-36 score: 126.9
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	SUPERFAMILY	54821	Ribosomal protein S3 C-terminal domain	coord: 119..217
IPR001351	Ribosomal protein S3, C-terminal	PFAM	PF00189	Ribosomal_S3_C	coord: 131..213 e-value: 5.2E-31 score: 107.0
IPR005704	Ribosomal protein S3, bacterial-type	TIGRFAM	TIGR01009	TIGR01009	coord: 1..217 e-value: 1.2E-81 score: 271.5
IPR005704	Ribosomal protein S3, bacterial-type	HAMAP	MF_01309_B	Ribosomal_S3_B	coord: 1..217 score: 33.946671
IPR015946	K homology domain-like, alpha/beta	GENE3D	3.30.300.20		coord: 17..117 e-value: 7.1E-22 score: 79.4
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 2..216
None	No IPR available	PANTHER	PTHR11760:SF39	30S RIBOSOMAL PROTEIN S3, CHLOROPLASTIC	coord: 2..216
None	No IPR available	CDD	cd02412	30S_S3_KH	coord: 2..120 e-value: 8.65617E-33 score: 112.56
IPR018280	Ribosomal protein S3, conserved site	PROSITE	PS00548	RIBOSOMAL_S3	coord: 174..208
IPR004044	K Homology domain, type 2	PROSITE	PS50823	KH_TYPE_2	coord: 43..118 score: 10.187005
IPR009019	K homology domain superfamily, prokaryotic type	SUPERFAMILY	54814	Prokaryotic type KH domain (KH-domain type II)	coord: 2..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0019036.1	IVF0019036.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005840	ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding