IVF0018884 (gene) Melon (IVF77) v1

Overview


Name	IVF0018884
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	polyadenylate-binding protein RBP47B'
Location	chr09: 20867655 .. 20872520 (+)
RNA-Seq Expression	IVF0018884
Synteny	IVF0018884

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCACTCGATTTTGTTCGAAAACCTTAATTGAAAGGGTAGGGCAAGATTCATTTTGTTACACAATTTTGAGTCATTCATCTACCCAACCTAAGTTTACATATAATAAAAAAGTGAGATATTTTTTTCTTTTTTCAAAAGTCACCGTCGTCCCCAGCGCGAAAACAAAAACCCTAGCAGTGGCAAGAGCCAAGAATCCGCAGGTTTTCTTCAAATCTCTCCACTTGTTTATGTTTCTCTCCTAATTTATAAAATCTTTAGCGATTACCAAGCTTTTGCCCCCAAAATCTTTGGAGTCACGGATCAATTTACAGAGACAGCGAAGTGGGAGAGTGTAGAAACAATCTCTCAAACTTTACAAGAACATCAGCAAAGTCAATTACCCGAAGCAATAAGATAATGCGTCAATAGATACGATGGCGACACTGGCAGGTCAACCAACTCACCATCAACCAACTACGGTGGAGGAAGTTAGAACGCTTTGGATAGGGGATTTGCAGTACTGGGTCGATGAGTCTTACCTTAATTCTTGCTTTGCTCATACTGGGGAGGTTCGTTTGTTAGTTTCTTTTCTTTCTTTCTTTCTTTATTATTATTTTTGTAACTTTGGTGTTGAATGGTGATGTTTGTAATCATAAACTCGTTAGGATTTCACCAGTTTCTCTAGCTGATGACGTTGTTGGTATGAAATTTAGATGTGGGTAAGTGGATTCTTGAGGTTTTCTTCTTTCAGTTAGGTCTTTCCAAATAATTTCTCCTGAAATTGTCTGGTGTTTGGAAGTACATTTGGGTGCGTAAAATTAGAACGTATTTGTATCTTGCCCTATTGGTGCCGAGATCTGAAATATGGGCTGAGGGAGAGCCTCTCTTATGAACTTGCATGCCACTGAATGCGGATGAGTTTGATGCACGAGAGCCGTGGTAGTAGAAACACCAATGTATAAAGCTATAGTTTTTTTATAGTTGTTTTGCTGTTATATTCCAATACCCTATGCGAATTACAAATGTCTGATGTCTATTTGTTGTTTGTGTTCTAGAATTTGAGTAAGAGCTTGTAACTCAGCTGCATTCGGACAAGAACATTCTGTAGTTTGTTGACTATGCTATATTTTCTAGTGCAGGTAATATCAATTAAAATTATTCGCAACAAGATCACTGGCCAGCCTGAAGGTTACGGGTTTGTGGAATTTGTATCTCATGCTGCAGCAGAAAGAATTTTGCAGACATACAATGGAACTCAGATGCCCGGAACAGAGCAAACTTTCAGATTGAATTGGGCCTCCTTTGGAATTGGAGAAAGGCGCCCTGATGCTGGCCCAGAGCACTCTATTTTTGTGGGGGATTTGGCTCCTGATGTTACAGACTATCTGTTGCAAGAGACCTTTAGAGCGCAATACCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACTGGCCGTTCAAAGGGATATGGGTTTGTTAAATTTGCTGATGAAAATGAAAGGAATCGAGCTATGTCAGAAATGAATGGTGTTTACTGCTCAACTAGGCCTATGCGTATTAGTGCAGCAACACCTAAAAAAACCATCGGTGTTCAGCAGCAATATAGTCTAGGTAAAGGTAATGAATAATGAATGTTCAGTATTGCCTTTACTCTTCTTCATTTTGTTGTCTCACATTTTCTTGGAGTGAGTACAATCATTTTTACTATTCATCCATGTTTCCAACGCTTTTATCCAAATAAATAAATCAATCAATTAATTTTCCATCCAAGTTTCCAGTGCTTCTAGCTTTTCTATTTGCATAACTGCATGTTATGTTTCATATCTTTGCTAGTAGTCATAGTCGTAGATATGAAACTTTTGGCCTTAAAATTTGAATTTCACCTTTGTCTATGGGAGTTCTTTGTTGGATAGTGCTAAGATCATTTTTTTTTTCTTTTTGCATCATCAAACCTATAGCTAGTAGTTAATAGGTTTGATCATTCTGAATTTTAGTTGATATTAGCTAAATTAGTGTTCTTGGGTCTATGATGAAAATGTGTTAAATTAATTATTATTTATTGTATATGTCAAAATAGAATTTCTCTCTTATTGAATATTTTGGATAAATATGTTTAGTCAATGTCAAAAATATTTTCTAAATGCCTTGAGGGGAGAGGATATCTGCAAATTTCAAGTAAAAAAGAAGTCATTGTTAATGTATTAGTGTTTTTTTCCTTTTCCCTTGAAAAATCTTAAGATGGGATGGTAATTTCCTATTTTAAAACTTGTACTTACCAATGTGTCTCTTGTCTTAGCAATGTACCCAGTTCCAGCCTACACTACATCCGTGCCTGTGCTTCCAGCAGATTATGATGCAAATAACACAACAGTAAGTCAAGGACAAGTGATAGTTTTACTTCGTCTGGTTTCTATGCTCATCTCTTACTATATTGTGCTTTGTGCAGATATTTGTTGGCAACTTGGATCCTAATATTACAGAGGAGGAGTTGAAGCAAACTTTTTTGCAGTTTGGTGAGATTGCTTATGTGAAAATTCCTGCCGGGAAAGGCTGTGGTTTTGTACAGTTTGGGACAAGGTGTGTTTGCATGATTAATTTTATTGATGTAAGTTGAGTAAATCGCATCTCTCCTTGCTCCTGTTTCTATGCCTTGAAAGAAGCTTGTGAACAATAATAAGGTTCAGGGAGTGGGGGGAAAAACATCTTATGGAATAGATGGAAAGTTCTTGTGTATGTACGCTTCTCAAAGATATGTTATTGACTTCTTACTTCACATGAACATTTGGACTTTGGATTTAATATGTTCTCCATATCATGTCCATGCAGGGCTTCAGCTGAAGAAGCCATCCAAAAGATGCAAGGAAAGATAATTGGTCAACAAGTGGTTCGTACTTCTTGGGGTAGAAATCCAGCTGCCAAGCAGGTAACTGTGACCTTCCTACTGAAGTCCAGAACAAATATTTTCCTAGATATACCAGCATACTTTTCCACTGTGGATGTGATATGTATTTATGTGGTTTTCTAATTCATGCTTTTGGGTTTAAATTACAAAACCCTGATTGCTTAATGAGTTTGTGCATAAAACATTAGGCGTGTTGTCTTTTATTTAGCCTGTGAATTTGATATTTCATATCTATGGAAAAATGGCTCGCATTCATCATAGTGAATAATTTTTGCTAAAATACCATTTTTGGTCCGTGTACTTTGAGATTTTTCAATTGTAGTCTTTGTATTTTCAAATGTCCAATTTTAGTTAATGTAGTTTCAAGAAATCTTAAATTTAGTCCCTCAAATTCTAAGGACTCAAAGTACAAGGACTATGGTTATTTTGAACAAACCTCAAAAGTATAAGGACTCAAAGTACAGGGACTGTAGTTATTTTGAAAGTATAAGGACTAAAATTGCTAAAATACCTTTCTTTTGTGAACGTTAAATCACCCTAGTACGAAAATAGGATGTAAAGGAAAGGCCTGGAAAGTGGAGATGAGGTATACCTCAGAGAAGTATAAAGACAATCATCTACAAACCTTTATCCGACAGAATCATTTACTTATACTATAATATATTGTTTTTAAATATTTGCTTAGCTAAATGGGTATTTTTTGGTACAGGAAATCGACTCCTTGGTAAAATTGATTATGCATGTTATCTTTCTGTTAGCAAGCTCTCGCAAGTCACAACAGCCTGTTTAATGCTCATAGTGAACTAGAGCTCACTCTATTGGGTAGACTGATGAAATGGTGATGAATTTCAGGACTTGGCTACTTGGGGTCAGCAAGTTGATCCGAACCAGTGGAGTGCTTACTATGGGTATGGAGGGACTTATGATGCATATGGATATGGAGTTGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATGCCTCATATCCTCAACAGGTAAGTTTCATTTTCTTTAGAAGGCAAGAGCTCCATACTCTTCTATGGTAGATAGTGGGCAAAGTGATTGTTATAATCTATTTGTTTGCAGCCATTTTTCAATTGGAGTCTATTGGGTGAATTCTAATTGCCCTTTCAAGATGCTAAGGCTTAGAATCAGAATAAAATGAGTGGGAATCAAGAGCAATATATTTGTAGAAAAAGGTTCATCCATCCAGAAAATGTATTTGCCTTTTTGATCTTGGAACTATTCATTTTAACTCTTTTCTTTTAGGTTGACGGCGTACAAGATTTGGCCACGGTAGCTGGTGCGGTCCCTTCTGTAGAACAAGGAGAGGAATGGAATGATACGCTGGATACCCCGGATGTTGATTAGTAAGGCTCTCTCTTTTGTCCCTAATTAGCTACAATACAAGATCAGGAATGTACAAGTTTCTATTTTATTTGAACTTGCATTGACATCAAGTTTTTAATTTTGGCAGTTTAAATGATGCATACCTCTCAAAACATGAAAGCGCTATTTTAGGCTGGCCGTTATGGTTGACTACTTCATCACTGGTTAGGCAAACATGAGTGGTTGTTCGTCAAAATATGTTGGCACTGCGTGAAGGCAACTGGAGAAAAACTACACTATGTGCTTTATATGCTTGACCATACTCATAGTCGATGATATTGACACAATACCGTTGCCATGTACGGTATAATGTGTTTGATTTAATAATACAGTTTTTACTATAGGAACAGGGTTGCCAAGGTTAGGTGCTTTGATGCTCTATGTATTATGATGATGCTCTCAACTATTTGGCAATGGAGTTTTCATATCAGGAGAACATCTGCTTTGATCTGTACTGTGTCTCATTATGCCGAAGTGTACTAGTTGTATTTTGAACAGGCAGCTTAATTGTTTTGTCAGATTAAATTTAGCGAAAAGAAAATGAAGCTGAAATGAAATGGAGTTTTTGAATGAA

mRNA sequence

ATTTCACTCGATTTTGTTCGAAAACCTTAATTGAAAGGGTAGGGCAAGATTCATTTTGTTACACAATTTTGAGTCATTCATCTACCCAACCTAAGTTTACATATAATAAAAAAGTGAGATATTTTTTTCTTTTTTCAAAAGTCACCGTCGTCCCCAGCGCGAAAACAAAAACCCTAGCAGTGGCAAGAGCCAAGAATCCGCAGGTTTTCTTCAAATCTCTCCACTTGTTTATGTTTCTCTCCTAATTTATAAAATCTTTAGCGATTACCAAGCTTTTGCCCCCAAAATCTTTGGAGTCACGGATCAATTTACAGAGACAGCGAAGTGGGAGAGTGTAGAAACAATCTCTCAAACTTTACAAGAACATCAGCAAAGTCAATTACCCGAAGCAATAAGATAATGCGTCAATAGATACGATGGCGACACTGGCAGGTCAACCAACTCACCATCAACCAACTACGGTGGAGGAAGTTAGAACGCTTTGGATAGGGGATTTGCAGTACTGGGTCGATGAGTCTTACCTTAATTCTTGCTTTGCTCATACTGGGGAGGTAATATCAATTAAAATTATTCGCAACAAGATCACTGGCCAGCCTGAAGGTTACGGGTTTGTGGAATTTGTATCTCATGCTGCAGCAGAAAGAATTTTGCAGACATACAATGGAACTCAGATGCCCGGAACAGAGCAAACTTTCAGATTGAATTGGGCCTCCTTTGGAATTGGAGAAAGGCGCCCTGATGCTGGCCCAGAGCACTCTATTTTTGTGGGGGATTTGGCTCCTGATGTTACAGACTATCTGTTGCAAGAGACCTTTAGAGCGCAATACCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACTGGCCGTTCAAAGGGATATGGGTTTGTTAAATTTGCTGATGAAAATGAAAGGAATCGAGCTATGTCAGAAATGAATGGTGTTTACTGCTCAACTAGGCCTATGCGTATTAGTGCAGCAACACCTAAAAAAACCATCGGTGTTCAGCAGCAATATAGTCTAGGTAAAGCAATGTACCCAGTTCCAGCCTACACTACATCCGTGCCTGTGCTTCCAGCAGATTATGATGCAAATAACACAACAATATTTGTTGGCAACTTGGATCCTAATATTACAGAGGAGGAGTTGAAGCAAACTTTTTTGCAGTTTGGTGAGATTGCTTATGTGAAAATTCCTGCCGGGAAAGGCTGTGGTTTTGTACAGTTTGGGACAAGGGCTTCAGCTGAAGAAGCCATCCAAAAGATGCAAGGAAAGATAATTGGTCAACAAGTGGTTCGTACTTCTTGGGGTAGAAATCCAGCTGCCAAGCAGGAAATCGACTCCTTGGACTTGGCTACTTGGGGTCAGCAAGTTGATCCGAACCAGTGGAGTGCTTACTATGGGTATGGAGGGACTTATGATGCATATGGATATGGAGTTGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATGCCTCATATCCTCAACAGGTTGACGGCGTACAAGATTTGGCCACGGTAGCTGGTGCGGTCCCTTCTGTAGAACAAGGAGAGGAATGGAATGATACGCTGGATACCCCGGATGTTGATTATTTAAATGATGCATACCTCTCAAAACATGAAAGCGCTATTTTAGGCTGGCCGTTATGGTTGACTACTTCATCACTGGTTAGGCAAACATGAGTGGTTGTTCGTCAAAATATGTTGGCACTGCGTGAAGGCAACTGGAGAAAAACTACACTATGTGCTTTATATGCTTGACCATACTCATAGTCGATGATATTGACACAATACCGTTGCCATGTACGGTATAATGTGTTTGATTTAATAATACAGTTTTTACTATAGGAACAGGGTTGCCAAGGTTAGGTGCTTTGATGCTCTATGTATTATGATGATGCTCTCAACTATTTGGCAATGGAGTTTTCATATCAGGAGAACATCTGCTTTGATCTGTACTGTGTCTCATTATGCCGAAGTGTACTAGTTGTATTTTGAACAGGCAGCTTAATTGTTTTGTCAGATTAAATTTAGCGAAAAGAAAATGAAGCTGAAATGAAATGGAGTTTTTGAATGAA

Coding sequence (CDS)

ATGGCGACACTGGCAGGTCAACCAACTCACCATCAACCAACTACGGTGGAGGAAGTTAGAACGCTTTGGATAGGGGATTTGCAGTACTGGGTCGATGAGTCTTACCTTAATTCTTGCTTTGCTCATACTGGGGAGGTAATATCAATTAAAATTATTCGCAACAAGATCACTGGCCAGCCTGAAGGTTACGGGTTTGTGGAATTTGTATCTCATGCTGCAGCAGAAAGAATTTTGCAGACATACAATGGAACTCAGATGCCCGGAACAGAGCAAACTTTCAGATTGAATTGGGCCTCCTTTGGAATTGGAGAAAGGCGCCCTGATGCTGGCCCAGAGCACTCTATTTTTGTGGGGGATTTGGCTCCTGATGTTACAGACTATCTGTTGCAAGAGACCTTTAGAGCGCAATACCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACTGGCCGTTCAAAGGGATATGGGTTTGTTAAATTTGCTGATGAAAATGAAAGGAATCGAGCTATGTCAGAAATGAATGGTGTTTACTGCTCAACTAGGCCTATGCGTATTAGTGCAGCAACACCTAAAAAAACCATCGGTGTTCAGCAGCAATATAGTCTAGGTAAAGCAATGTACCCAGTTCCAGCCTACACTACATCCGTGCCTGTGCTTCCAGCAGATTATGATGCAAATAACACAACAATATTTGTTGGCAACTTGGATCCTAATATTACAGAGGAGGAGTTGAAGCAAACTTTTTTGCAGTTTGGTGAGATTGCTTATGTGAAAATTCCTGCCGGGAAAGGCTGTGGTTTTGTACAGTTTGGGACAAGGGCTTCAGCTGAAGAAGCCATCCAAAAGATGCAAGGAAAGATAATTGGTCAACAAGTGGTTCGTACTTCTTGGGGTAGAAATCCAGCTGCCAAGCAGGAAATCGACTCCTTGGACTTGGCTACTTGGGGTCAGCAAGTTGATCCGAACCAGTGGAGTGCTTACTATGGGTATGGAGGGACTTATGATGCATATGGATATGGAGTTGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATGCCTCATATCCTCAACAGGTTGACGGCGTACAAGATTTGGCCACGGTAGCTGGTGCGGTCCCTTCTGTAGAACAAGGAGAGGAATGGAATGATACGCTGGATACCCCGGATGTTGATTATTTAAATGATGCATACCTCTCAAAACATGAAAGCGCTATTTTAGGCTGGCCGTTATGGTTGACTACTTCATCACTGGTTAGGCAAACATGA

Protein sequence

MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTTSSLVRQT

Homology

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BLAST of IVF0018884 vs. ExPASy Swiss-Prot
Match: Q8VXZ9 (Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B' PE=2 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 2.5e-162
Identity = 290/426 (68.08%), Postives = 329/426 (77.23%), Query Frame = 0


Query: 7   QPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFV 66
           Q ++H P T+EEVRTLWIGDLQYWVDE+YL SCF+ TGE++S+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNGTQMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMR 186
           YLLQETFR  Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISAATPKKTIGVQQQYSLGKAMYPVP-----AYTTSVPVLPADYDANNTTIFVGNLDPNI 246
           ISAATPKK +GVQQQY + KA+YPV      A      V P + D   TTI V NLD N+
Sbjct: 191 ISAATPKKNVGVQQQY-VTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNV 250

Query: 247 TEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGR 306
           TEEELK+ F Q GE+ YVKIPA KG G+VQF TR SAEEA+Q+MQG++IGQQ VR SW +
Sbjct: 251 TEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSK 310

Query: 307 NPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASY 366
           NP             W  Q DPNQW+ YYGYG  YDAY YG  QDPS+YAYG Y GY  Y
Sbjct: 311 NPGQD---------GWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGY-GYPQY 370

Query: 367 PQQVDGVQDLA-TVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT 426
           PQQ +G QD++ + AG V   EQ  E  D L TPDVD LN AYLS H SAILG P+W  T
Sbjct: 371 PQQGEGTQDISNSAAGGVAGAEQ--ELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRT 422

[Close]

BLAST of IVF0018884 vs. ExPASy Swiss-Prot
Match: Q9LEB4 (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP45 PE=1 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 7.9e-116
Identity = 222/365 (60.82%), Postives = 260/365 (71.23%), Query Frame = 0


Query: 1   MATLAGQPTHHQPT-TVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQ 60
           MAT    P+   PT    EVR+LWIGDLQYW+DE+YL++CF HTGE++S K+IRNK TGQ
Sbjct: 67  MATTNPNPS---PTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQ 126

Query: 61  PEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGD 120
            EGYGF+EF SHAAAE ILQTYNGT MP  EQ FR+NWAS G GERR D+  EH+IFVGD
Sbjct: 127 SEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSA-EHTIFVGD 186

Query: 121 LAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVY 180
           LA DVTDY+LQETF++ Y SVRGAKVVTD  TGRSKGYGFVKFADE+E+ RAM+EMNGV 
Sbjct: 187 LAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVL 246

Query: 181 CSTRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDP 240
           CSTRPMRI  A  KK +G  Q     KA Y  P  T        + D NNTTIFVG LDP
Sbjct: 247 CSTRPMRIGPAANKKPVGTPQ-----KATYQNPQAT------QGESDPNNTTIFVGGLDP 306

Query: 241 NITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSW 300
            + EE L+Q F  +GE+ +VKI AGK CGFVQFGTRASAE+A+  + G  +G Q +R SW
Sbjct: 307 TVAEEHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSW 366

Query: 301 GRNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYG-VVQDPSLYAYGAYSGY 360
           GR+P++KQ     D   WG         AYYGYG  Y+AYGY    QDP++Y YG Y GY
Sbjct: 367 GRSPSSKQ----TDQTQWG-----GSGGAYYGYGQGYEAYGYAPPAQDPNMY-YGNYPGY 406

Query: 361 ASYPQ 364
           A+Y Q
Sbjct: 427 ANYQQ 406

[Close]

BLAST of IVF0018884 vs. ExPASy Swiss-Prot
Match: Q9LEB3 (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 3.2e-109
Identity = 208/359 (57.94%), Postives = 258/359 (71.87%), Query Frame = 0


Query: 8   PTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVE 67
           PT  Q ++ E+ +T+WIGDLQ W+DESYL+SCF+  GEVIS+KIIRNK TGQ E YGFVE
Sbjct: 73  PTQIQSSS-EDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVE 132

Query: 68  FVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDY 127
           F +HAAAE++LQ+YNGT MP TEQ FRLNWA F  GE+R + G + SIFVGDLA DVTD 
Sbjct: 133 FNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDT 192

Query: 128 LLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRI 187
           +L++TF ++YPS++GAKVV D NTG SKGYGFV+F DE+ER+RAM+EMNGVYCS+R MRI
Sbjct: 193 MLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRI 252

Query: 188 SAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVL---PADYDANNTTIFVGNLDPNITEE 247
             ATPKK     +QYS  +A+     Y ++        +D D++NTTIFVG LD  +T+E
Sbjct: 253 GVATPKKP-SAHEQYS-SQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDE 312

Query: 248 ELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPA 307
           EL+Q+F QFGE+  VKIPAGKGCGFVQF  R+SA+EAIQK+ G IIG+Q VR SWGR+PA
Sbjct: 313 ELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPA 372

Query: 308 AKQ-EIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVV--QDPSLYAYGAYSGYAS 361
            KQ   DS            +QW+  Y     Y  YGYG    QD  +YA GA  G +S
Sbjct: 373 NKQMRTDS-----------GSQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAAYGASS 417

[Close]

BLAST of IVF0018884 vs. ExPASy Swiss-Prot
Match: Q0J9Y2 (RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 7.9e-108
Identity = 208/360 (57.78%), Postives = 250/360 (69.44%), Query Frame = 0


Query: 13  PTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHA 72
           P   +EV+TLWIGDLQ W+DESY+ +CFA TGEV S+K+IR+K +GQ +GYGFVEF S A
Sbjct: 83  PAAADEVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRA 142

Query: 73  AAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQET 132
           AA+RILQTYNG  MP  E  FRLNWAS   GE+R D  P+++IFVGDLA DVTDYLLQET
Sbjct: 143 AADRILQTYNGQMMPNVEMVFRLNWAS--AGEKRDDT-PDYTIFVGDLAADVTDYLLQET 202

Query: 133 FRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATP 192
           FR  YPSV+GAKVVTD  T RSKGYGFVKF D  E+ RAM+EMNG+ CS+RPMRI  A  
Sbjct: 203 FRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAAN 262

Query: 193 KKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQ 252
           KKT GVQ++         VP    +     ++ D NNTTIFVG LDPN+TE+ LKQ F  
Sbjct: 263 KKTTGVQER---------VP----NAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAP 322

Query: 253 FGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQEIDSL 312
           +GE+ +VKIP GK CGFVQ+  R SAE+A+  +QG +IG Q VR SWGR+ + KQ     
Sbjct: 323 YGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQ----- 382

Query: 313 DLATWGQQVDPNQWSA-------YYGYGGTYDAY-GYGVVQDPSLYAYGAYSGYASYPQQ 365
                  Q D NQW A       Y GYG  Y+AY GY   QDP++Y YGAY+GY +Y QQ
Sbjct: 383 ------PQHDSNQWGAGAGAGGYYGGYGQGYEAYGGYAQPQDPNMYGYGAYAGYPNYQQQ 415

[Close]

BLAST of IVF0018884 vs. ExPASy Swiss-Prot
Match: Q9SAB3 (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B PE=1 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 7.4e-106
Identity = 197/354 (55.65%), Postives = 249/354 (70.34%), Query Frame = 0


Query: 5   AGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYG 64
           A  P   QPTT +E+RTLWIGDLQYW+DE++L  CFAHTGE++S K+IRNK TGQ EGYG
Sbjct: 47  AAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYG 106

Query: 65  FVEFVSHAAAERILQTYNGTQMPG-TEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPD 124
           F+EF SHAAAER+LQT+N   +P   +Q FRLNWAS   G++R D+ P+++IFVGDLA D
Sbjct: 107 FIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDS-PDYTIFVGDLAAD 166

Query: 125 VTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTR 184
           VTDY+L ETFRA YPSV+GAKVV D  TGR+KGYGFV+F+DE+E+ RAM+EMNGV CSTR
Sbjct: 167 VTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTR 226

Query: 185 PMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITE 244
           PMRI  A  KK +  Q+            +Y +S   +  D D NNTT+FVG LD ++T+
Sbjct: 227 PMRIGPAASKKGVTGQRD-----------SYQSSAAGVTTDNDPNNTTVFVGGLDASVTD 286

Query: 245 EELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNP 304
           + LK  F Q+GEI +VKIPAGK CGFVQF  ++ AEEA++ + G  +G   VR SWGR+P
Sbjct: 287 DHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSP 346

Query: 305 AAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSG 358
           + K            Q  DP+Q+  Y GYG   + YGY + QDP+ Y YG YSG
Sbjct: 347 SNK------------QSGDPSQF-YYGGYGQGQEQYGYTMPQDPNAY-YGGYSG 374

[Close]

BLAST of IVF0018884 vs. ExPASy TrEMBL
Match: A0A1S3ASS8 (polyadenylate-binding protein RBP47B' isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482609 PE=4 SV=1)

HSP 1 Score: 880.2 bits (2273), Expect = 3.6e-252
Identity = 427/427 (100.00%), Postives = 427/427 (100.00%), Query Frame = 0


Query: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60
           MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360
           RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS
Sbjct: 301 RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360

Query: 361 YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT 420
           YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT
Sbjct: 361 YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT 420

Query: 421 SSLVRQT 428
           SSLVRQT
Sbjct: 421 SSLVRQT 427

[Close]

BLAST of IVF0018884 vs. ExPASy TrEMBL
Match: A0A1S3AT51 (polyadenylate-binding protein RBP47B' isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482609 PE=4 SV=1)

HSP 1 Score: 870.9 bits (2249), Expect = 2.2e-249
Identity = 425/427 (99.53%), Postives = 425/427 (99.53%), Query Frame = 0


Query: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60
           MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYSL  AMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSL--AMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360
           RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS
Sbjct: 301 RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360

Query: 361 YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT 420
           YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT
Sbjct: 361 YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT 420

Query: 421 SSLVRQT 428
           SSLVRQT
Sbjct: 421 SSLVRQT 425

[Close]

BLAST of IVF0018884 vs. ExPASy TrEMBL
Match: A0A1S3ATQ6 (polyadenylate-binding protein RBP47B' isoform X3 OS=Cucumis melo OX=3656 GN=LOC103482609 PE=4 SV=1)

HSP 1 Score: 864.8 bits (2233), Expect = 1.5e-247
Identity = 422/427 (98.83%), Postives = 422/427 (98.83%), Query Frame = 0


Query: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60
           MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360
           RNPAAKQ     DLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS
Sbjct: 301 RNPAAKQ-----DLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360

Query: 361 YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT 420
           YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT
Sbjct: 361 YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT 420

Query: 421 SSLVRQT 428
           SSLVRQT
Sbjct: 421 SSLVRQT 422

[Close]

BLAST of IVF0018884 vs. ExPASy TrEMBL
Match: A0A6J1HXL5 (polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468959 PE=4 SV=1)

HSP 1 Score: 840.5 bits (2170), Expect = 3.1e-240
Identity = 409/427 (95.78%), Postives = 415/427 (97.19%), Query Frame = 0


Query: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60
           MATLA QPTHHQPT+VEEVRTLWIGDLQYWVDESYL+SCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQY+ GKAMYPVPAYTT VPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEI YVKIPAG+GCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360
           RNPAAKQ     DLATWGQQVDPNQWSAYYGYGG YDAYGYGVVQDPSLYAYGAYSGYAS
Sbjct: 301 RNPAAKQ-----DLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYAS 360

Query: 361 YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT 420
           YPQQVDGVQDLA VAGAVP+VEQGEEWNDTLDTPDV+ LNDAYLSKHESAILGWPLWLTT
Sbjct: 361 YPQQVDGVQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTT 420

Query: 421 SSLVRQT 428
           SSLVRQT
Sbjct: 421 SSLVRQT 422

[Close]

BLAST of IVF0018884 vs. ExPASy TrEMBL
Match: A0A6J1E2I3 (polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430253 PE=4 SV=1)

HSP 1 Score: 839.3 bits (2167), Expect = 6.9e-240
Identity = 408/427 (95.55%), Postives = 415/427 (97.19%), Query Frame = 0


Query: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60
           MATLA QPTHHQPT+VEEVRTLWIGDLQYWVDESYL+SCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQY+ GKAMYPVPAYTT VPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEI YVKIPAG+GCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360
           RNPAAKQ     DLATWGQQVDPNQWSAYYGYGG YDAYGYGVVQDPSLYAYGAYSGYAS
Sbjct: 301 RNPAAKQ-----DLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYAS 360

Query: 361 YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT 420
           YPQQVDGVQDLA VAGAVP++EQGEEWNDTLDTPDV+ LNDAYLSKHESAILGWPLWLTT
Sbjct: 361 YPQQVDGVQDLAAVAGAVPALEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTT 420

Query: 421 SSLVRQT 428
           SSLVRQT
Sbjct: 421 SSLVRQT 422

[Close]

BLAST of IVF0018884 vs. NCBI nr
Match: XP_008437076.1 (PREDICTED: polyadenylate-binding protein RBP47B' isoform X1 [Cucumis melo] >XP_008437077.1 PREDICTED: polyadenylate-binding protein RBP47B' isoform X1 [Cucumis melo])

HSP 1 Score: 875 bits (2260), Expect = 0.0
Identity = 427/427 (100.00%), Postives = 427/427 (100.00%), Query Frame = 0


Query: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60
           MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360
           RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS
Sbjct: 301 RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360

Query: 361 YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT 420
           YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT
Sbjct: 361 YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT 420

Query: 421 SSLVRQT 427
           SSLVRQT
Sbjct: 421 SSLVRQT 427

[Close]

BLAST of IVF0018884 vs. NCBI nr
Match: XP_008437078.1 (PREDICTED: polyadenylate-binding protein RBP47B' isoform X2 [Cucumis melo])

HSP 1 Score: 865 bits (2236), Expect = 0.0
Identity = 425/427 (99.53%), Postives = 425/427 (99.53%), Query Frame = 0


Query: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60
           MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYSL  AMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSL--AMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360
           RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS
Sbjct: 301 RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360

Query: 361 YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT 420
           YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT
Sbjct: 361 YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT 420

Query: 421 SSLVRQT 427
           SSLVRQT
Sbjct: 421 SSLVRQT 425

[Close]

BLAST of IVF0018884 vs. NCBI nr
Match: XP_008437079.1 (PREDICTED: polyadenylate-binding protein RBP47B' isoform X3 [Cucumis melo])

HSP 1 Score: 859 bits (2220), Expect = 9.10e-315
Identity = 422/427 (98.83%), Postives = 422/427 (98.83%), Query Frame = 0


Query: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60
           MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360
           RNPAAKQ     DLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS
Sbjct: 301 RNPAAKQ-----DLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360

Query: 361 YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT 420
           YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT
Sbjct: 361 YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT 420

Query: 421 SSLVRQT 427
           SSLVRQT
Sbjct: 421 SSLVRQT 422

[Close]

BLAST of IVF0018884 vs. NCBI nr
Match: XP_004152401.1 (polyadenylate-binding protein RBP47B' isoform X1 [Cucumis sativus] >XP_031741259.1 polyadenylate-binding protein RBP47B' isoform X1 [Cucumis sativus] >XP_031741261.1 polyadenylate-binding protein RBP47B' isoform X1 [Cucumis sativus])

HSP 1 Score: 853 bits (2203), Expect = 3.65e-312
Identity = 419/427 (98.13%), Postives = 419/427 (98.13%), Query Frame = 0


Query: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60
           MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360
           RNPAAKQ     DL TWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLY YGAYSGYAS
Sbjct: 301 RNPAAKQ-----DLTTWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYGYGAYSGYAS 360

Query: 361 YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT 420
           YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVD LNDAYLSKHESAILGWPLWLTT
Sbjct: 361 YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDCLNDAYLSKHESAILGWPLWLTT 420

Query: 421 SSLVRQT 427
           SSLVRQT
Sbjct: 421 SSLVRQT 422

[Close]

BLAST of IVF0018884 vs. NCBI nr
Match: XP_038875164.1 (polyadenylate-binding protein RBP47B' [Benincasa hispida])

HSP 1 Score: 846 bits (2185), Expect = 2.02e-309
Identity = 415/427 (97.19%), Postives = 416/427 (97.42%), Query Frame = 0


Query: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60
           MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFR QYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVP LPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPALPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360
           RNPAAKQ     DLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGY S
Sbjct: 301 RNPAAKQ-----DLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYGS 360

Query: 361 YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT 420
           YPQQVDGVQDLA+VA  VPSVEQGEEWND LDTPDVDYLNDAYLSKHESAILGWPLWLTT
Sbjct: 361 YPQQVDGVQDLASVACVVPSVEQGEEWNDMLDTPDVDYLNDAYLSKHESAILGWPLWLTT 420

Query: 421 SSLVRQT 427
           SSLVRQT
Sbjct: 421 SSLVRQT 422

[Close]

BLAST of IVF0018884 vs. TAIR 10
Match: AT5G19350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 573.2 bits (1476), Expect = 1.8e-163
Identity = 290/426 (68.08%), Postives = 329/426 (77.23%), Query Frame = 0


Query: 7   QPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFV 66
           Q ++H P T+EEVRTLWIGDLQYWVDE+YL SCF+ TGE++S+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNGTQMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMR 186
           YLLQETFR  Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISAATPKKTIGVQQQYSLGKAMYPVP-----AYTTSVPVLPADYDANNTTIFVGNLDPNI 246
           ISAATPKK +GVQQQY + KA+YPV      A      V P + D   TTI V NLD N+
Sbjct: 191 ISAATPKKNVGVQQQY-VTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNV 250

Query: 247 TEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGR 306
           TEEELK+ F Q GE+ YVKIPA KG G+VQF TR SAEEA+Q+MQG++IGQQ VR SW +
Sbjct: 251 TEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSK 310

Query: 307 NPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASY 366
           NP             W  Q DPNQW+ YYGYG  YDAY YG  QDPS+YAYG Y GY  Y
Sbjct: 311 NPGQD---------GWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGY-GYPQY 370

Query: 367 PQQVDGVQDLA-TVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTT 426
           PQQ +G QD++ + AG V   EQ  E  D L TPDVD LN AYLS H SAILG P+W  T
Sbjct: 371 PQQGEGTQDISNSAAGGVAGAEQ--ELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRT 422

[Close]

BLAST of IVF0018884 vs. TAIR 10
Match: AT5G19350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 569.3 bits (1466), Expect = 2.6e-162
Identity = 285/421 (67.70%), Postives = 323/421 (76.72%), Query Frame = 0


Query: 7   QPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFV 66
           Q ++H P T+EEVRTLWIGDLQYWVDE+YL SCF+ TGE++S+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNGTQMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMR 186
           YLLQETFR  Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEEL 246
           ISAATPKK +GVQQQY     +    A      V P + D   TTI V NLD N+TEEEL
Sbjct: 191 ISAATPKKNVGVQQQYVTKVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEEL 250

Query: 247 KQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAK 306
           K+ F Q GE+ YVKIPA KG G+VQF TR SAEEA+Q+MQG++IGQQ VR SW +NP   
Sbjct: 251 KKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPGQD 310

Query: 307 QEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQVD 366
                     W  Q DPNQW+ YYGYG  YDAY YG  QDPS+YAYG Y GY  YPQQ +
Sbjct: 311 ---------GWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQGE 370

Query: 367 GVQDLA-TVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTTSSLVR 426
           G QD++ + AG V   EQ  E  D L TPDVD LN AYLS H SAILG P+W  TSSL  
Sbjct: 371 GTQDISNSAAGGVAGAEQ--ELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRTSSLTS 418

[Close]

BLAST of IVF0018884 vs. TAIR 10
Match: AT1G11650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 385.6 bits (989), Expect = 5.3e-107
Identity = 197/354 (55.65%), Postives = 249/354 (70.34%), Query Frame = 0


Query: 5   AGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYG 64
           A  P   QPTT +E+RTLWIGDLQYW+DE++L  CFAHTGE++S K+IRNK TGQ EGYG
Sbjct: 47  AAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYG 106

Query: 65  FVEFVSHAAAERILQTYNGTQMPG-TEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPD 124
           F+EF SHAAAER+LQT+N   +P   +Q FRLNWAS   G++R D+ P+++IFVGDLA D
Sbjct: 107 FIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDS-PDYTIFVGDLAAD 166

Query: 125 VTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTR 184
           VTDY+L ETFRA YPSV+GAKVV D  TGR+KGYGFV+F+DE+E+ RAM+EMNGV CSTR
Sbjct: 167 VTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTR 226

Query: 185 PMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITE 244
           PMRI  A  KK +  Q+            +Y +S   +  D D NNTT+FVG LD ++T+
Sbjct: 227 PMRIGPAASKKGVTGQRD-----------SYQSSAAGVTTDNDPNNTTVFVGGLDASVTD 286

Query: 245 EELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNP 304
           + LK  F Q+GEI +VKIPAGK CGFVQF  ++ AEEA++ + G  +G   VR SWGR+P
Sbjct: 287 DHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSP 346

Query: 305 AAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSG 358
           + K            Q  DP+Q+  Y GYG   + YGY + QDP+ Y YG YSG
Sbjct: 347 SNK------------QSGDPSQF-YYGGYGQGQEQYGYTMPQDPNAY-YGGYSG 374

[Close]

BLAST of IVF0018884 vs. TAIR 10
Match: AT5G54900.1 (RNA-binding protein 45A )

HSP 1 Score: 377.1 bits (967), Expect = 1.9e-104
Identity = 197/360 (54.72%), Postives = 241/360 (66.94%), Query Frame = 0


Query: 13  PTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHA 72
           P +  +V++LWIGDLQ W+DE+Y+ S FA +GE  S K+IRNK+TGQ EGYGF+EFVSH+
Sbjct: 53  PGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHS 112

Query: 73  AAERILQTYNGTQMPGTEQTFRLNWASFGIGERR-PDAGPEHSIFVGDLAPDVTDYLLQE 132
            AER+LQTYNG  MP TEQTFRLNWA  G GE+R    GP+H+IFVGDLAP+VTDY+L +
Sbjct: 113 VAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSD 172

Query: 133 TFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAAT 192
           TF+  Y SV+GAKVV D  TGRSKGYGFV+FADENE+ RAM+EMNG YCSTRPMRI  A 
Sbjct: 173 TFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAA 232

Query: 193 PKKTIGVQQQYSLGKAMYPVPA-YTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTF 252
            K  + +Q            PA Y  +      D D NNTTIFVG LD N+T++ELK  F
Sbjct: 233 NKNALPMQ------------PAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIF 292

Query: 253 LQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQEID 312
            QFGE+ +VKIP GK CGFVQ+  +ASAE A+  + G  +G Q +R SWGR+P       
Sbjct: 293 GQFGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSP------- 352

Query: 313 SLDLATWGQQVDPNQWS--AYYGY-GGTYDAYGYGV---VQDPSLYAYGAYSGYASYPQQ 365
                   +Q D  QW+   YYGY       YGY      QDP+ Y YG Y+GY +Y QQ
Sbjct: 353 -------NKQSDQAQWNGGGYYGYPPQPQGGYGYAAQPPTQDPNAY-YGGYTGYGNYQQQ 385

[Close]

BLAST of IVF0018884 vs. TAIR 10
Match: AT1G47500.1 (RNA-binding protein 47C' )

HSP 1 Score: 375.2 bits (962), Expect = 7.1e-104
Identity = 205/360 (56.94%), Postives = 246/360 (68.33%), Query Frame = 0


Query: 11  HQPTTVEEVRTLWIGDLQYWVDESYLNSCF--AHTGEVISIKIIRNKITGQPEGYGFVEF 70
           HQ     E +T+W+GDLQ W+DE+YLNS F  A   E++S+K+IRNK  G  EGYGFVEF
Sbjct: 94  HQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEF 153

Query: 71  VSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERR-PDAGPEHSIFVGDLAPDVTDY 130
            SH  A+++LQ +NG  MP T+Q FRLNWASF  GE+R  + GP+ SIFVGDLAPDV+D 
Sbjct: 154 ESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDA 213

Query: 131 LLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRI 190
           LL ETF  +YPSV+ AKVV D NTGRSKGYGFV+F DENER +AM+EMNGV CS+R MRI
Sbjct: 214 LLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRI 273

Query: 191 SAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELK 250
             ATP+KT G QQQ        P  A+T S      + D  NTTIFVG LD ++T+E+LK
Sbjct: 274 GPATPRKTNGYQQQ----GGYMPSGAFTRS------EGDTINTTIFVGGLDSSVTDEDLK 333

Query: 251 QTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQ 310
           Q F +FGEI  VKIP GKGCGFVQF  R +AEEA++K+ G +IG+Q VR SWGRNPA KQ
Sbjct: 334 QPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQ 393

Query: 311 EIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQ-DPSLY-AYGAYSGYASYPQQV 366
             D        Q VDP     YYG G  Y+ YGY V Q DP +Y A   Y  Y  + QQV
Sbjct: 394 PRDKYG----NQWVDP-----YYG-GQFYNGYGYMVPQPDPRMYPAAPYYPMYGGHQQQV 433

The following BLAST results are available for this feature:

BLAST of IVF0018884 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VXZ9	2.5e-162	68.08	Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B'...	[more]
Q9LEB4	7.9e-116	60.82	Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q9LEB3	3.2e-109	57.94	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q0J9Y2	7.9e-108	57.78	RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=...	[more]
Q9SAB3	7.4e-106	55.65	Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B P...	[more]

BLAST of IVF0018884 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3ASS8	3.6e-252	100.00	polyadenylate-binding protein RBP47B' isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A1S3AT51	2.2e-249	99.53	polyadenylate-binding protein RBP47B' isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A1S3ATQ6	1.5e-247	98.83	polyadenylate-binding protein RBP47B' isoform X3 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1HXL5	3.1e-240	95.78	polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1E2I3	6.9e-240	95.55	polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita moschata OX=3...	[more]

BLAST of IVF0018884 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437076.1	0.0	100.00	PREDICTED: polyadenylate-binding protein RBP47B' isoform X1 [Cucumis melo] >XP_0...	[more]
XP_008437078.1	0.0	99.53	PREDICTED: polyadenylate-binding protein RBP47B' isoform X2 [Cucumis melo]	[more]
XP_008437079.1	9.10e-315	98.83	PREDICTED: polyadenylate-binding protein RBP47B' isoform X3 [Cucumis melo]	[more]
XP_004152401.1	3.65e-312	98.13	polyadenylate-binding protein RBP47B' isoform X1 [Cucumis sativus] >XP_031741259...	[more]
XP_038875164.1	2.02e-309	97.19	polyadenylate-binding protein RBP47B' [Benincasa hispida]	[more]

BLAST of IVF0018884 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19350.1	1.8e-163	68.08	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G19350.2	2.6e-162	67.70	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G11650.2	5.3e-107	55.65	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G54900.1	1.9e-104	54.72	RNA-binding protein 45A	[more]
AT1G47500.1	7.1e-104	56.94	RNA-binding protein 47C'	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 21..96 e-value: 2.8E-14 score: 63.4 coord: 114..188 e-value: 3.6E-21 score: 86.3 coord: 231..298 e-value: 1.3E-22 score: 91.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 115..180 e-value: 2.1E-16 score: 59.5 coord: 22..90 e-value: 2.2E-14 score: 53.0 coord: 232..295 e-value: 2.3E-18 score: 65.8
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 20..100 score: 15.408587
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 230..302 score: 17.387012
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 113..192 score: 17.455235
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 222..310 e-value: 6.1E-25 score: 89.4
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 19..99 e-value: 3.2E-24 score: 86.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 101..207 e-value: 1.6E-22 score: 81.9
None	No IPR available	PANTHER	PTHR47640:SF6	POLYADENYLATE-BINDING PROTEIN RBP45A-RELATED	coord: 9..364
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 9..364
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 112..191 e-value: 2.82231E-54 score: 173.234
None	No IPR available	CDD	cd12346	RRM3_NGR1_NAM8_like	coord: 229..300 e-value: 1.20261E-38 score: 132.042
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 21..101 e-value: 2.40074E-48 score: 157.81
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 112..304
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 8..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0018884.3	IVF0018884.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding