IVF0018867 (gene) Melon (IVF77) v1

Overview


Name	IVF0018867
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Transpos_assoc domain-containing protein
Location	chr12: 2755610 .. 2756246 (+)
RNA-Seq Expression	IVF0018867
Synteny	IVF0018867

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGCCTTTGTAGTTTGGAGGGGTTTGTAGGATGCGAAGATATTTTGAAGTATTTTGTTGTTAATAATTAGGTTGTGTTGGCTATCCTGCAGTTATGGATAAGGGTTGGATGAAACTTAGAAATAAGTTATCCCTTGAGTATAGACATGGAGTGACCCAATTTTTAGAATTTGCCAAATTTCACGTTGATGCTTACGGACGATTGAGGTGTCCATGCAAGAGATGTTTGAATTTAAATTGGAGCTCATTAGAGGGTGTGGAAAGACATCTGCTGACTATAGGAATATCCCCCTACTACACAGAATGGGTGTATCATGGAGAGTCATTAAGCTATAGAGGTACAGAAAACTTTGAGGAAGGAACTAGTAGTAATCCTTTTAATGAAGGAACTAGTAGTACACAATTTAATGAAGAAGGTGATATCTTTGGTATGCTAAATGATTTACAAGCCCCTATTGAACATGAAGAGGAAATAGAGGAATTTCGTTTGGAAGATGAAATGGCGATGAATGTTGGGGTAAATATAGATGAAGATACAACAAATAATATATTTCAGGACTTATTGAATCAAGCACGTAATGAGTTGTACCCCGGTTGTTCTGAATTTTCGTCGTTGAATTTTTGGTTAAGTTGA

mRNA sequence

ATGGTAGTTGTGTTGGCTATCCTGCAAAATAAGTTATCCCTTGAGTATAGACATGGAGTGACCCAATTTTTAGAATTTGCCAAATTTCACGTTGATGCTTACGGACGATTGAGGTGTCCATGCAAGAGATGTTTGAATTTAAATTGGAGCTCATTAGAGGGTGTGGAAAGACATCTGCTGACTATAGGAATATCCCCCTACTACACAGAATGGGTGTATCATGGAGAGTCATTAAGCTATAGAGGTACAGAAAACTTTGAGGAAGGAACTAGTAGTAATCCTTTTAATGAAGGAACTAGTAGTACACAATTTAATGAAGAAGGTGATATCTTTGGTATGCTAAATGATTTACAAGCCCCTATTGAACATGAAGAGGAAATAGAGGAATTTCGTTTGGAAGATGAAATGGCGATGAATGTTGGGGTAAATATAGATGAAGATACAACAAATAATATATTTCAGGACTTATTGAATCAAGCACGTAATGAGTTGTACCCCGGTTGTTCTGAATTTTCGTCGTTGAATTTTTGGTTAAGTTGA

Coding sequence (CDS)

ATGGTAGTTGTGTTGGCTATCCTGCAAAATAAGTTATCCCTTGAGTATAGACATGGAGTGACCCAATTTTTAGAATTTGCCAAATTTCACGTTGATGCTTACGGACGATTGAGGTGTCCATGCAAGAGATGTTTGAATTTAAATTGGAGCTCATTAGAGGGTGTGGAAAGACATCTGCTGACTATAGGAATATCCCCCTACTACACAGAATGGGTGTATCATGGAGAGTCATTAAGCTATAGAGGTACAGAAAACTTTGAGGAAGGAACTAGTAGTAATCCTTTTAATGAAGGAACTAGTAGTACACAATTTAATGAAGAAGGTGATATCTTTGGTATGCTAAATGATTTACAAGCCCCTATTGAACATGAAGAGGAAATAGAGGAATTTCGTTTGGAAGATGAAATGGCGATGAATGTTGGGGTAAATATAGATGAAGATACAACAAATAATATATTTCAGGACTTATTGAATCAAGCACGTAATGAGTTGTACCCCGGTTGTTCTGAATTTTCGTCGTTGAATTTTTGGTTAAGTTGA

Protein sequence

MVVVLAILQNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPYYTEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEIEEFRLEDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNFWLS

Homology

[Close]

BLAST of IVF0018867 vs. ExPASy TrEMBL
Match: A0A5A7UMP4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001050 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 3.5e-92
Identity = 167/169 (98.82%), Postives = 168/169 (99.41%), Query Frame = 0


Query: 8   LQNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY 67
           L+NKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY
Sbjct: 8   LRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY 67

Query: 68  YTEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEI 127
           Y EWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEI
Sbjct: 68  YIEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEI 127

Query: 128 EEFRLEDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNF 177
           EEFRLEDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNF
Sbjct: 128 EEFRLEDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNF 176

[Close]

BLAST of IVF0018867 vs. ExPASy TrEMBL
Match: A0A5D3D5X7 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00580 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.4e-88
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 16  YRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPYYTEWVYHG 75
           +RHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPYYTEWVYHG
Sbjct: 90  FRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPYYTEWVYHG 149

Query: 76  ESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEIEEFRLEDE 135
           ESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEIEEFRLEDE
Sbjct: 150 ESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEIEEFRLEDE 209

Query: 136 MAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNF 177
           MAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNF
Sbjct: 210 MAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNF 250

[Close]

BLAST of IVF0018867 vs. ExPASy TrEMBL
Match: A0A5D3BA83 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001580 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.1e-72
Identity = 141/173 (81.50%), Postives = 150/173 (86.71%), Query Frame = 0


Query: 8   LQNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY 67
           L+NKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY
Sbjct: 59  LRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY 118

Query: 68  YTEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEI 127
           YTEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEI
Sbjct: 119 YTEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEI 178

Query: 128 EEFRLEDEMAMNVG---VNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNFW 178
           EEFRLEDEMAMNVG   V +    +N  F D+L +     +P C+     +F+
Sbjct: 179 EEFRLEDEMAMNVGLMHVKVLNGWSNKSF-DMLLELLRSAFPMCNSTIPSSFY 230

[Close]

BLAST of IVF0018867 vs. ExPASy TrEMBL
Match: A0A5D3BP89 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00540 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.5e-71
Identity = 133/134 (99.25%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 8   LQNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY 67
           L+NKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY
Sbjct: 65  LRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY 124

Query: 68  YTEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEI 127
           YTEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEI
Sbjct: 125 YTEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEI 184

Query: 128 EEFRLEDEMAMNVG 142
           EEFRLEDEMAMNVG
Sbjct: 185 EEFRLEDEMAMNVG 198

[Close]

BLAST of IVF0018867 vs. ExPASy TrEMBL
Match: A0A5D3DY98 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold381G00070 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 5.8e-71
Identity = 139/173 (80.35%), Postives = 149/173 (86.13%), Query Frame = 0


Query: 8   LQNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY 67
           L+NKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY
Sbjct: 137 LRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY 196

Query: 68  YTEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEI 127
           YTEWVYHGESLSYRGTENFEEGTSSN FNEGTSSTQFNEEGDIFGMLNDLQAPIEHEE+I
Sbjct: 197 YTEWVYHGESLSYRGTENFEEGTSSNLFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEKI 256

Query: 128 EEFRLEDEMAMNVG---VNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNFW 178
           EEFRLEDEMAMNVG   V +    +N  F D+L +     +P C+     +F+
Sbjct: 257 EEFRLEDEMAMNVGLMHVKVLNGWSNKSF-DMLLELLRAAFPMCNSTIPSSFY 308

[Close]

BLAST of IVF0018867 vs. NCBI nr
Match: KAA0056368.1 (uncharacterized protein E6C27_scaffold186G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 343 bits (881), Expect = 2.95e-108
Identity = 167/169 (98.82%), Postives = 168/169 (99.41%), Query Frame = 0


Query: 8   LQNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY 67
           L+NKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY
Sbjct: 8   LRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY 67

Query: 68  YTEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEI 127
           Y EWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEI
Sbjct: 68  YIEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEI 127

Query: 128 EEFRLEDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNF 176
           EEFRLEDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNF
Sbjct: 128 EEFRLEDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNF 176

[Close]

BLAST of IVF0018867 vs. NCBI nr
Match: TYK18968.1 (uncharacterized protein E5676_scaffold418G00580 [Cucumis melo var. makuwa])

HSP 1 Score: 332 bits (851), Expect = 1.95e-105
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 16  YRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPYYTEWVYHG 75
           +RHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPYYTEWVYHG
Sbjct: 90  FRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPYYTEWVYHG 149

Query: 76  ESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEIEEFRLEDE 135
           ESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEIEEFRLEDE
Sbjct: 150 ESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEIEEFRLEDE 209

Query: 136 MAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNF 176
           MAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNF
Sbjct: 210 MAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNF 250

[Close]

BLAST of IVF0018867 vs. NCBI nr
Match: TYJ99928.1 (uncharacterized protein E5676_scaffold701G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 277 bits (708), Expect = 9.13e-91
Identity = 133/134 (99.25%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 8   LQNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY 67
           L+NKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY
Sbjct: 65  LRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY 124

Query: 68  YTEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEI 127
           YTEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEI
Sbjct: 125 YTEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEI 184

Query: 128 EEFRLEDEMAMNVG 141
           EEFRLEDEMAMNVG
Sbjct: 185 EEFRLEDEMAMNVG 198

[Close]

BLAST of IVF0018867 vs. NCBI nr
Match: TYJ95864.1 (uncharacterized protein E5676_scaffold110G001580 [Cucumis melo var. makuwa])

HSP 1 Score: 279 bits (713), Expect = 2.63e-89
Identity = 142/173 (82.08%), Postives = 150/173 (86.71%), Query Frame = 0


Query: 8   LQNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY 67
           L+NKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY
Sbjct: 59  LRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY 118

Query: 68  YTEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEI 127
           YTEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEI
Sbjct: 119 YTEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEI 178

Query: 128 EEFRLEDEMAMNVG---VNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNFW 177
           EEFRLEDEMAMNVG   V +    +N  F  LL   R+  +P C+     +F+
Sbjct: 179 EEFRLEDEMAMNVGLMHVKVLNGWSNKSFDMLLELLRSA-FPMCNSTIPSSFY 230

[Close]

BLAST of IVF0018867 vs. NCBI nr
Match: KAA0032412.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 267 bits (682), Expect = 4.21e-85
Identity = 128/132 (96.97%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 8   LQNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY 67
           L+NKLSLEYRHGVTQFLEFAKF+VDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY
Sbjct: 146 LRNKLSLEYRHGVTQFLEFAKFYVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPY 205

Query: 68  YTEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEI 127
           YTEWVYHGESLSYRG ENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQ PIEHEEEI
Sbjct: 206 YTEWVYHGESLSYRGAENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQTPIEHEEEI 265

Query: 128 EEFRLEDEMAMN 139
           EEFRLEDEMAMN
Sbjct: 266 EEFRLEDEMAMN 277

The following BLAST results are available for this feature:

BLAST of IVF0018867 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0018867 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UMP4	3.5e-92	98.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3D5X7	1.4e-88	99.38	Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3BA83	1.1e-72	81.50	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BP89	1.5e-71	99.25	Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3DY98	5.8e-71	80.35	Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of IVF0018867 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056368.1	2.95e-108	98.82	uncharacterized protein E6C27_scaffold186G001050 [Cucumis melo var. makuwa]	[more]
TYK18968.1	1.95e-105	99.38	uncharacterized protein E5676_scaffold418G00580 [Cucumis melo var. makuwa]	[more]
TYJ99928.1	9.13e-91	99.25	uncharacterized protein E5676_scaffold701G00540 [Cucumis melo var. makuwa]	[more]
TYJ95864.1	2.63e-89	82.08	uncharacterized protein E5676_scaffold110G001580 [Cucumis melo var. makuwa]	[more]
KAA0032412.1	4.21e-85	96.97	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]

BLAST of IVF0018867 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029480	Transposase-associated domain	PFAM	PF13963	Transpos_assoc	coord: 9..76 e-value: 3.2E-18 score: 65.6
None	No IPR available	PANTHER	PTHR10775:SF145	TRANSPOSASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN-RELATED	coord: 10..176
None	No IPR available	PANTHER	PTHR10775	UNCHARACTERIZED	coord: 10..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0018867.2	IVF0018867.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane