IVF0018827 (gene) Melon (IVF77) v1

Overview


Name	IVF0018827
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	bet1-like SNARE 1-2
Location	chr04: 14843344 .. 14846691 (+)
RNA-Seq Expression	IVF0018827
Synteny	IVF0018827

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTATTTTTCCAATTAAGCTGAAATTCTGGCCGAAGAACAACGCTTTTCGCTGGACTGATCCCCCGTGATGAGTTACAGAAGGTTCGTATCCAAATTCTTCGTCGATCCACACTTCACTTTCTTTTACTTTAACTATACCACCACACTGCCTTCCATTACTCTATCAATTTTCTGATTTCTGCCTTCTTTTGTTGTTATTTTCATTCATTACCTCCCTCTAGTTTCTCGCTTCCATGAGTTGGTTCTGATCTTGTGTTATAATTCCATTATGATTTACGTTTGAGTTCTTAATCTACAATTTGGCTCAAAATGGTATGAAGTAAACCGTAGATCGCTGCATCAATTTTGTACGGTAGGATATGTCTTTTCGATCTGGTTGCATATCCCTGACACACACAAGTGTGTGAATCCTATGATGACTTAAAGAAAGCTACAACTTTATATTGGTTTTACATTTCCTTCTTTGGTTTTGTGTTTTTGTCCAAATTTTGAATAGTAATTTGACTGAAAGCATAATGAAGGTCGAATACCTTCTCTATTCTGGAATCCTGGATTTTAGCTTTCTTTCTCCTTGCTAACATGGAGTTAATTTGTAGCCGTTTTTTATTCTACTAATTAAAATTTTTTAGGCACAAACATTGGTATTATTCTTGGATATCAGTATGCCTTTTCTTGTATAAGAATTTGTATATTGTTTCGTTTGAAATAGCTGAGATTGTTTTTGTTCATAGGGAGCACCGTTCTTCTAGATCTGCTCTCTTTGATGACCTGGAGGAGGGCGGTCTGAGGACTAGCTCTTCCGTTGAAATTAAAGAGCATGACAATGACAAAGCCCTCCATACTTTGGAAGATAGAGTTTCTATTCTGAAAAGGGTAAGTTTTAAGCAGAGAGACGCTTCTTAATTATTAATTTATCTATCTATCTTTTATATAAAAGCTTGTTATGATTGAACACATTATATCCTATCCTTTTGAAGCAATTACGATACGTTGAATGTCATAAGTTGAAGTGACTCTTTCTATGACATAATGATACTGTCTTAGCCATTTTACTTAGTAAACTGTTTTTAAACAATTATTTTGGCACCGAAATCCTGCTGCATGAGCATCTTAATTTATTATTCAGATGATTTTGCAATCCAGTAATTCATCCTCTTGCTTCAGATTCTTAATCATAGAAGAACATGAATAGGAAAAAGGATGCAATGCCTTTTCCTTTCAAGATTTCTTTTATATTTGTGCATTTAGCACCTGAATTTGAGTGTTATGATGAGCTTTTCTTCAAGTATGATCGTAGGTGTTGCCTGAAAGTGTCATACCATTGAATCTAAAGACTTCTATGCTCAAAGAGCTTTGGAATGGGTGAACTAATGGAGTGGTTTCATTAGTTTAGACTAGTGGTATGAAGATCTCTCGGATATAATAAGTGGTCATAGGTCTAAAGACCCTCAAATTCCCTTTTAATGACTAATGACTGATGGTTAATTTTCCGTTTTGTCACTACCTAAAATGGTGAATTGGTGTAAAAGGATTGCTGGTGTAGTGCAAATGATCACTTGATATCTCCATCATCACTTAATATAAACACCAAAGATGAGGGTTTTCTTAGTACTTCCATAATGGTGCTTACAGCTTCCATTTCCAGCAAGAAAGAATTCTGTCCCCCCTCCCCGATCTGTCTTCTTAATCGAGCAACTTTTGATGTATATATTGTTTGAAATAGTTGACAGGTGACATTCACGAAGAAGTGGAAAGTCATAATCATTTACTTGACCGAATGGTATGTTGTTTATTCAAGGTTATTTATTTATGTCTGTCTTGTGAGTTGAAAATGATTGGAGCATGTTTCTTTATGTGGATTTTATTCTAATCAGGGAAATGGCATGGATGCTTCAAGGGGTATAATGTCAAGAACCATGGATCGATTCAAGATGGTAATTGATCTAGCTCTTTTCAGCTCATTTTATTTTGGGGAAAATATGGTTATATCTTATATATATGCATGCCTTTAATAGGAAGGAAGAAGATGATGGGATAGAGATTTTTTTTCCTTTTGTAATTCATGATGTCCAATTAGAGGGTGTTTTTTTTTTTTTTTTGGATTTGGGTTTCTTCTTTGTAATTTCATTCCATCAATAAACTTTCTTGTTTGATAACCATTTAACTTTTGGTTTTTAGTTTTTAAAAACTGAGCCTATACTCTTTTCCTTCTCTAAATTTTTGGTTTTGTTATCTATTATTTTTCCAATGTTTTAAAAACCAAAGTAGTTTTTAAAAACTTGTTTTTCTTTTTTGGAATTGGCTAAGAATTCAACTTTACTTAAGAAAAATGCAAATCATTGTAAGAAATTTAAAGGAAATAAACTTAATTTTCAAAATTCAAAAAAACGAAATAGTTAATGATGGATGTCTAAAAGATGAGAAATCAAGCCCTGAAAAATTGGCTGTACATTTCTCCTATTTGCATGCATTCTCCTAATACAAATTCACGTTCTACAGGTTTTCGAGCAAAAAACGAAGTGGAGAACTTGTAGACTTGCATTGTATTTTATATTGTCCTTCTTACTTTTTTTCTATCTCATCAGGTAAGAATTTAGCTCAGCTTTGCGTATCATTTTTTCAAACATTGCTCTCTTTTTTATTTAAAATAGTCAGTCAGTATACCTGCTATCCATGCTGTTTGGTCGAGCCTGGACTAAGGAACTTTTGACTTCATTAAATTAGACCCTTTTATTGAGTTCTTTTAAATTTATCGAGATTTTCATCTAATTGTTATATTAACAGCTTGGCGTGATGTTTTAGCGAGTATTTATTCCACTAATTCTATGTTGGAACGTTCAGTTTTCTTTTATATAGAAGAGAATGCAGTTTTAATATCCTTCTCTTTTCTTCTGTTTCAGCCTTTAAATTCAAACCTCCCCATTTTTGTATTTCATTTTCATTGGCAAATTCCATTTGCAGGTTCCTCAGATACTTCATGCAAAGTTGAAGTAAGATTTCTATGTTGAATCAACTCGAAGCATTGCACGACCGTGACAACCTTGCTTAGACCTTGTTTCTACAAGAACACTGAAATACATACCATACTTTCCTGCGGTACAAGATTTCTCAAAATGCATAGTTTCTGCTTCGAAGGAGTGGAACAGATGGTCATTCTTTTAATCACTATTCTTAATTTATTTTTTTATGGGTTAAAAGCGCATATCCGTCAGTTTAGGTATATTTCTTGATTTAAATCATGAGTATATTTTGCTCATGCTTTTAAAAAGAAATAAGCTTTTATTTTCAGGTTAGTACAGGACACACTGTCTCATTGACTCCCATTTTGAATCAGTATATTTGGAG

mRNA sequence

ATTTTATTTTTCCAATTAAGCTGAAATTCTGGCCGAAGAACAACGCTTTTCGCTGGACTGATCCCCCGTGATGAGTTACAGAAGGGAGCACCGTTCTTCTAGATCTGCTCTCTTTGATGACCTGGAGGAGGGCGGTCTGAGGACTAGCTCTTCCGTTGAAATTAAAGAGCATGACAATGACAAAGCCCTCCATACTTTGGAAGATAGAGTTTCTATTCTGAAAAGGTTGACAGGTGACATTCACGAAGAAGTGGAAAGTCATAATCATTTACTTGACCGAATGGGAAATGGCATGGATGCTTCAAGGGGTATAATGTCAAGAACCATGGATCGATTCAAGATGGTTTTCGAGCAAAAAACGAAGTGGAGAACTTGTAGACTTGCATTGTATTTTATATTGTCCTTCTTACTTTTTTTCTATCTCATCAGGTTCCTCAGATACTTCATGCAAAGTTGAAGTAAGATTTCTATGTTGAATCAACTCGAAGCATTGCACGACCGTGACAACCTTGCTTAGACCTTGTTTCTACAAGAACACTGAAATACATACCATACTTTCCTGCGGTACAAGATTTCTCAAAATGCATAGTTTCTGCTTCGAAGGAGTGGAACAGATGGTCATTCTTTTAATCACTATTCTTAATTTATTTTTTTATGGGTTAAAAGCGCATATCCGTCAGTTTAGGTATATTTCTTGATTTAAATCATGAGTATATTTTGCTCATGCTTTTAAAAAGAAATAAGCTTTTATTTTCAGGTTAGTACAGGACACACTGTCTCATTGACTCCCATTTTGAATCAGTATATTTGGAG

Coding sequence (CDS)

ATGAGTTACAGAAGGGAGCACCGTTCTTCTAGATCTGCTCTCTTTGATGACCTGGAGGAGGGCGGTCTGAGGACTAGCTCTTCCGTTGAAATTAAAGAGCATGACAATGACAAAGCCCTCCATACTTTGGAAGATAGAGTTTCTATTCTGAAAAGGTTGACAGGTGACATTCACGAAGAAGTGGAAAGTCATAATCATTTACTTGACCGAATGGGAAATGGCATGGATGCTTCAAGGGGTATAATGTCAAGAACCATGGATCGATTCAAGATGGTTTTCGAGCAAAAAACGAAGTGGAGAACTTGTAGACTTGCATTGTATTTTATATTGTCCTTCTTACTTTTTTTCTATCTCATCAGGTTCCTCAGATACTTCATGCAAAGTTGA

Protein sequence

MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYLIRFLRYFMQS

Homology

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BLAST of IVF0018827 vs. ExPASy Swiss-Prot
Match: Q94CG2 (Bet1-like SNARE 1-2 OS=Arabidopsis thaliana OX=3702 GN=BET12 PE=2 SV=4)

HSP 1 Score: 146.0 bits (367), Expect = 3.0e-34
Identity = 77/127 (60.63%), Postives = 102/127 (80.31%), Query Frame = 0


Query: 1   MSYRREHRSSRSALF---DDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDI 60
           M++RRE+R+SR++LF   D LEEG LR SSS    E DND+AL  L+DRVS LKR+TGDI
Sbjct: 1   MNFRRENRASRTSLFDGLDGLEEGRLRASSSYAHDERDNDEALENLQDRVSFLKRVTGDI 60

Query: 61  HEEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFY 120
           HEEVE+HN LLD++GN MD++RGIMS T++RFK+VFE+K+  ++C+L  YF+L FL+ +Y
Sbjct: 61  HEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLIMYY 120

Query: 121 LIRFLRY 125
           LIR L Y
Sbjct: 121 LIRLLNY 127

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BLAST of IVF0018827 vs. ExPASy Swiss-Prot
Match: Q9M2J9 (Bet1-like SNARE 1-1 OS=Arabidopsis thaliana OX=3702 GN=BET11 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.9e-29
Identity = 70/122 (57.38%), Postives = 91/122 (74.59%), Query Frame = 0


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKRLTGDIH 60
           M+ RRE R  RS+LFD +EEGG+R +SS   EI EH+N++AL  L+DRV +LKRL+GDI+
Sbjct: 1   MNPRREPRGGRSSLFDGIEEGGIRAASSYSHEINEHENERALEGLQDRVILLKRLSGDIN 60

Query: 61  EEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYL 120
           EEV++HN +LDRMGN MD+SRG +S TMDRFK VFE K+  R   L   F+  FL+ +YL
Sbjct: 61  EEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYYL 120

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BLAST of IVF0018827 vs. ExPASy Swiss-Prot
Match: O35623 (BET1 homolog OS=Mus musculus OX=10090 GN=Bet1 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 5.5e-04
Identity = 24/88 (27.27%), Postives = 49/88 (55.68%), Query Frame = 0


Query: 33  EHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMV 92
           E +ND+   +L  +V+ +K L+ +I  EV++ N LL  M +  D++ G + +TM R K++
Sbjct: 29  EEENDRLTESLRSKVTAIKSLSIEIGHEVKNQNKLLAEMDSQFDSTTGFLGKTMGRLKIL 88

Query: 93  FEQKTKWRTCRLALYFILSFLLFFYLIR 121
                    C + L+ +  F + +++I+
Sbjct: 89  SRGSQTKLLCYMMLFSLFVFFVIYWIIK 116

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BLAST of IVF0018827 vs. ExPASy Swiss-Prot
Match: Q62896 (BET1 homolog OS=Rattus norvegicus OX=10116 GN=Bet1 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 5.5e-04
Identity = 30/114 (26.32%), Postives = 57/114 (50.00%), Query Frame = 0


Query: 11  RSALFDDLEEGGL----RTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNH 70
           R+ L D    GG       +S     E +ND+   +L  +V+ +K L+ +I  EV++ N 
Sbjct: 3   RAGLGDGAPPGGYGNYGYANSGYNACEEENDRLTESLRSKVTAIKSLSIEIGHEVKNQNK 62

Query: 71  LLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYLIR 121
           LL  M +  D++ G + +TM R K++         C + L+ +  F + +++I+
Sbjct: 63  LLAEMDSQFDSTTGFLGKTMGRLKILSRGSQTKLLCYMMLFSLFVFFVIYWIIK 116

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BLAST of IVF0018827 vs. ExPASy TrEMBL
Match: A0A1S3BHN2 (bet1-like SNARE 1-2 OS=Cucumis melo OX=3656 GN=LOC103489954 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.6e-62
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60
           MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE
Sbjct: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60

Query: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYLIR 120
           VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYLIR
Sbjct: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYLIR 120

Query: 121 FLRYFMQS 129
           FLRYFMQS
Sbjct: 121 FLRYFMQS 128

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BLAST of IVF0018827 vs. ExPASy TrEMBL
Match: A0A0A0L808 (t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G469700 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.0e-61
Identity = 126/128 (98.44%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60
           MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE
Sbjct: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60

Query: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYLIR 120
           VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYF+LSFLL FYLIR
Sbjct: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLFYLIR 120

Query: 121 FLRYFMQS 129
           FLRYFMQS
Sbjct: 121 FLRYFMQS 128

[Close]

BLAST of IVF0018827 vs. ExPASy TrEMBL
Match: A0A6J1C943 (bet1-like SNARE 1-2 OS=Momordica charantia OX=3673 GN=LOC111009526 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.0e-58
Identity = 120/128 (93.75%), Postives = 125/128 (97.66%), Query Frame = 0


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60
           M+YRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALH+LEDRVSILKRLTGDIHEE
Sbjct: 2   MNYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEE 61

Query: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYLIR 120
           VESHN+LLDRMGNGMDASRGIMSRTMDRFKMVFEQK KWRTCRLA+YF+LSF L FYLIR
Sbjct: 62  VESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKIKWRTCRLAVYFVLSFFLLFYLIR 121

Query: 121 FLRYFMQS 129
           FLRYFMQS
Sbjct: 122 FLRYFMQS 129

[Close]

BLAST of IVF0018827 vs. ExPASy TrEMBL
Match: A0A6J1KMZ6 (bet1-like SNARE 1-2 OS=Cucurbita maxima OX=3661 GN=LOC111494805 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 7.1e-55
Identity = 117/129 (90.70%), Postives = 125/129 (96.90%), Query Frame = 0


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTS-SSVEIKEHDNDKALHTLEDRVSILKRLTGDIHE 60
           MSYRREHRSSRSALFDDLEEGGLR S S+VEIKEHDND+AL TLEDRVSILKRLTGDIHE
Sbjct: 1   MSYRREHRSSRSALFDDLEEGGLRASASAVEIKEHDNDRALLTLEDRVSILKRLTGDIHE 60

Query: 61  EVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYLI 120
           EVESHN+LLDRMGNGMD+SRGIMSRTMDRFKMVFEQK+KWRTCRLA+YF+LSFLL FYLI
Sbjct: 61  EVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMVFEQKSKWRTCRLAVYFVLSFLLLFYLI 120

Query: 121 RFLRYFMQS 129
           RFLR+FMQS
Sbjct: 121 RFLRFFMQS 129

[Close]

BLAST of IVF0018827 vs. ExPASy TrEMBL
Match: A0A6J1EPS6 (bet1-like SNARE 1-2 OS=Cucurbita moschata OX=3662 GN=LOC111436741 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 7.1e-55
Identity = 117/129 (90.70%), Postives = 125/129 (96.90%), Query Frame = 0


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTS-SSVEIKEHDNDKALHTLEDRVSILKRLTGDIHE 60
           MSYRREHRSSRSALFDDLEEGGLR S S+VEIKEHDND+AL TLEDRVSILKRLTGDIHE
Sbjct: 1   MSYRREHRSSRSALFDDLEEGGLRASASAVEIKEHDNDRALLTLEDRVSILKRLTGDIHE 60

Query: 61  EVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYLI 120
           EVESHN+LLDRMGNGMD+SRGIMSRTMDRFKMVFEQK+KWRTCRLA+YF+LSFLL FYLI
Sbjct: 61  EVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMVFEQKSKWRTCRLAVYFVLSFLLLFYLI 120

Query: 121 RFLRYFMQS 129
           RFLR+FMQS
Sbjct: 121 RFLRFFMQS 129

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BLAST of IVF0018827 vs. NCBI nr
Match: XP_008447527.1 (PREDICTED: bet1-like SNARE 1-2 [Cucumis melo])

HSP 1 Score: 244 bits (624), Expect = 2.28e-81
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60
           MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE
Sbjct: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60

Query: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYLIR 120
           VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYLIR
Sbjct: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYLIR 120

Query: 121 FLRYFMQS 128
           FLRYFMQS
Sbjct: 121 FLRYFMQS 128

[Close]

BLAST of IVF0018827 vs. NCBI nr
Match: XP_004151397.1 (bet1-like SNARE 1-2 [Cucumis sativus] >KGN58055.1 hypothetical protein Csa_010683 [Cucumis sativus])

HSP 1 Score: 242 bits (617), Expect = 2.67e-80
Identity = 126/128 (98.44%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60
           MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE
Sbjct: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60

Query: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYLIR 120
           VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYF+LSFLL FYLIR
Sbjct: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLFYLIR 120

Query: 121 FLRYFMQS 128
           FLRYFMQS
Sbjct: 121 FLRYFMQS 128

[Close]

BLAST of IVF0018827 vs. NCBI nr
Match: XP_038906834.1 (bet1-like SNARE 1-2 isoform X2 [Benincasa hispida])

HSP 1 Score: 239 bits (609), Expect = 4.43e-79
Identity = 123/128 (96.09%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60
           MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDR+SILKRLTGDIHEE
Sbjct: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRISILKRLTGDIHEE 60

Query: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYLIR 120
           VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQK+KWRTCRLALYF+LSFLL FYLIR
Sbjct: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKWRTCRLALYFVLSFLLLFYLIR 120

Query: 121 FLRYFMQS 128
           FLRYFMQ+
Sbjct: 121 FLRYFMQN 128

[Close]

BLAST of IVF0018827 vs. NCBI nr
Match: XP_022138310.1 (bet1-like SNARE 1-2 [Momordica charantia])

HSP 1 Score: 231 bits (590), Expect = 3.62e-76
Identity = 120/128 (93.75%), Postives = 125/128 (97.66%), Query Frame = 0


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60
           M+YRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALH+LEDRVSILKRLTGDIHEE
Sbjct: 2   MNYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEE 61

Query: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYLIR 120
           VESHN+LLDRMGNGMDASRGIMSRTMDRFKMVFEQK KWRTCRLA+YF+LSF L FYLIR
Sbjct: 62  VESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKIKWRTCRLAVYFVLSFFLLFYLIR 121

Query: 121 FLRYFMQS 128
           FLRYFMQS
Sbjct: 122 FLRYFMQS 129

[Close]

BLAST of IVF0018827 vs. NCBI nr
Match: XP_038906833.1 (bet1-like SNARE 1-2 isoform X1 [Benincasa hispida])

HSP 1 Score: 231 bits (588), Expect = 9.84e-76
Identity = 123/138 (89.13%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 1   MSYRR----------EHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSIL 60
           MSYRR          EHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDR+SIL
Sbjct: 1   MSYRRFISKIFVDAQEHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRISIL 60

Query: 61  KRLTGDIHEEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFIL 120
           KRLTGDIHEEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQK+KWRTCRLALYF+L
Sbjct: 61  KRLTGDIHEEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKSKWRTCRLALYFVL 120

Query: 121 SFLLFFYLIRFLRYFMQS 128
           SFLL FYLIRFLRYFMQ+
Sbjct: 121 SFLLLFYLIRFLRYFMQN 138

[Close]

BLAST of IVF0018827 vs. TAIR 10
Match: AT4G14455.1 (Target SNARE coiled-coil domain protein )

HSP 1 Score: 146.0 bits (367), Expect = 2.1e-35
Identity = 77/127 (60.63%), Postives = 102/127 (80.31%), Query Frame = 0


Query: 1   MSYRREHRSSRSALF---DDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDI 60
           M++RRE+R+SR++LF   D LEEG LR SSS    E DND+AL  L+DRVS LKR+TGDI
Sbjct: 1   MNFRRENRASRTSLFDGLDGLEEGRLRASSSYAHDERDNDEALENLQDRVSFLKRVTGDI 60

Query: 61  HEEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFY 120
           HEEVE+HN LLD++GN MD++RGIMS T++RFK+VFE+K+  ++C+L  YF+L FL+ +Y
Sbjct: 61  HEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLIMYY 120

Query: 121 LIRFLRY 125
           LIR L Y
Sbjct: 121 LIRLLNY 127

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BLAST of IVF0018827 vs. TAIR 10
Match: AT3G58170.1 (BET1P/SFT1P-like protein 14A )

HSP 1 Score: 128.6 bits (322), Expect = 3.5e-30
Identity = 70/122 (57.38%), Postives = 91/122 (74.59%), Query Frame = 0


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKRLTGDIH 60
           M+ RRE R  RS+LFD +EEGG+R +SS   EI EH+N++AL  L+DRV +LKRL+GDI+
Sbjct: 1   MNPRREPRGGRSSLFDGIEEGGIRAASSYSHEINEHENERALEGLQDRVILLKRLSGDIN 60

Query: 61  EEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYL 120
           EEV++HN +LDRMGN MD+SRG +S TMDRFK VFE K+  R   L   F+  FL+ +YL
Sbjct: 61  EEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYYL 120

The following BLAST results are available for this feature:

BLAST of IVF0018827 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94CG2	3.0e-34	60.63	Bet1-like SNARE 1-2 OS=Arabidopsis thaliana OX=3702 GN=BET12 PE=2 SV=4	[more]
Q9M2J9	4.9e-29	57.38	Bet1-like SNARE 1-1 OS=Arabidopsis thaliana OX=3702 GN=BET11 PE=1 SV=1	[more]
O35623	5.5e-04	27.27	BET1 homolog OS=Mus musculus OX=10090 GN=Bet1 PE=1 SV=1	[more]
Q62896	5.5e-04	26.32	BET1 homolog OS=Rattus norvegicus OX=10116 GN=Bet1 PE=1 SV=1	[more]

BLAST of IVF0018827 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BHN2	4.6e-62	100.00	bet1-like SNARE 1-2 OS=Cucumis melo OX=3656 GN=LOC103489954 PE=4 SV=1	[more]
A0A0A0L808	3.0e-61	98.44	t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=365...	[more]
A0A6J1C943	4.0e-58	93.75	bet1-like SNARE 1-2 OS=Momordica charantia OX=3673 GN=LOC111009526 PE=4 SV=1	[more]
A0A6J1KMZ6	7.1e-55	90.70	bet1-like SNARE 1-2 OS=Cucurbita maxima OX=3661 GN=LOC111494805 PE=4 SV=1	[more]
A0A6J1EPS6	7.1e-55	90.70	bet1-like SNARE 1-2 OS=Cucurbita moschata OX=3662 GN=LOC111436741 PE=4 SV=1	[more]

BLAST of IVF0018827 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447527.1	2.28e-81	100.00	PREDICTED: bet1-like SNARE 1-2 [Cucumis melo]	[more]
XP_004151397.1	2.67e-80	98.44	bet1-like SNARE 1-2 [Cucumis sativus] >KGN58055.1 hypothetical protein Csa_01068...	[more]
XP_038906834.1	4.43e-79	96.09	bet1-like SNARE 1-2 isoform X2 [Benincasa hispida]	[more]
XP_022138310.1	3.62e-76	93.75	bet1-like SNARE 1-2 [Momordica charantia]	[more]
XP_038906833.1	9.84e-76	89.13	bet1-like SNARE 1-2 isoform X1 [Benincasa hispida]	[more]

BLAST of IVF0018827 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14455.1	2.1e-35	60.63	Target SNARE coiled-coil domain protein	[more]
AT3G58170.1	3.5e-30	57.38	BET1P/SFT1P-like protein 14A	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.5.110		coord: 37..100 e-value: 5.4E-14 score: 53.9
None	No IPR available	PANTHER	PTHR12791:SF36	BET1-LIKE SNARE 1-2	coord: 1..122
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 29..92
IPR039897	BET1-like protein	PANTHER	PTHR12791	GOLGI SNARE BET1-RELATED	coord: 1..122
IPR000727	Target SNARE coiled-coil homology domain	PROSITE	PS50192	T_SNARE	coord: 30..92 score: 11.96193
IPR039899	BET1, SNARE domain	CDD	cd15853	SNARE_Bet1	coord: 33..90 e-value: 2.10561E-18 score: 71.3798

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0018827.2	IVF0018827.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0030173	integral component of Golgi membrane