IVF0018777 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTATTTAGCAGCTTAATAGTGTTATCGGTCGCTCATTTATCGGCGGATGTTTCGCAATCCATTGCTCGCTTTCCAGATCCCCTCACCAGCCACCAACTTCTTTACCTTCTCTTCGCTTTCCCTCTTCAACAGCTCTCTCGACTTGCCCTCTCTCTCTGGACCTTCTTCTGTGTTCCTCCACCTGGTTCTTTCTACTATTACTACTATTCCTCTGACTCCGATCTCTCTTCTTACGCCTATGCTTCCGATTGA ATGGTATTTAGCAGCTTAATAGTGTTATCGGTCGCTCATTTATCGGCGGATGTTTCGCAATCCATTGCTCGCTTTCCAGATCCCCTCACCAGCCACCAACTTCTTTACCTTCTCTTCGCTTTCCCTCTTCAACAGCTCTCTCGACTTGCCCTCTCTCTCTGGACCTTCTTCTGTGTTCCTCCACCTGGTTCTTTCTACTATTACTACTATTCCTCTGACTCCGATCTCTCTTCTTACGCCTATGCTTCCGATTGA ATGGTATTTAGCAGCTTAATAGTGTTATCGGTCGCTCATTTATCGGCGGATGTTTCGCAATCCATTGCTCGCTTTCCAGATCCCCTCACCAGCCACCAACTTCTTTACCTTCTCTTCGCTTTCCCTCTTCAACAGCTCTCTCGACTTGCCCTCTCTCTCTGGACCTTCTTCTGTGTTCCTCCACCTGGTTCTTTCTACTATTACTACTATTCCTCTGACTCCGATCTCTCTTCTTACGCCTATGCTTCCGATTGA MVFSSLIVLSVAHLSADVSQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTFFCVPPPGSFYYYYYSSDSDLSSYAYASD Homology
BLAST of IVF0018777 vs. ExPASy TrEMBL
Match: A0A5A7T9K4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G001090 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.2e-34 Identity = 79/81 (97.53%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of IVF0018777 vs. ExPASy TrEMBL
Match: A0A0A0L0B8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G268060 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.5e-32 Identity = 75/78 (96.15%), Postives = 75/78 (96.15%), Query Frame = 0
BLAST of IVF0018777 vs. ExPASy TrEMBL
Match: A0A6J1DKC2 (uncharacterized protein LOC111021275 OS=Momordica charantia OX=3673 GN=LOC111021275 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 2.0e-29 Identity = 71/80 (88.75%), Postives = 73/80 (91.25%), Query Frame = 0
BLAST of IVF0018777 vs. ExPASy TrEMBL
Match: A0A6J1H2D5 (uncharacterized protein LOC111459803 OS=Cucurbita moschata OX=3662 GN=LOC111459803 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 7.0e-27 Identity = 66/78 (84.62%), Postives = 71/78 (91.03%), Query Frame = 0
BLAST of IVF0018777 vs. ExPASy TrEMBL
Match: A0A2P5FJR7 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_061140 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.4e-19 Identity = 54/75 (72.00%), Postives = 62/75 (82.67%), Query Frame = 0
BLAST of IVF0018777 vs. NCBI nr
Match: KAA0040112.1 (hypothetical protein E6C27_scaffold366G00870 [Cucumis melo var. makuwa] >TYK21737.1 hypothetical protein E5676_scaffold859G001090 [Cucumis melo var. makuwa]) HSP 1 Score: 153 bits (387), Expect = 4.21e-46 Identity = 79/81 (97.53%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of IVF0018777 vs. NCBI nr
Match: XP_022153861.1 (uncharacterized protein LOC111021275 [Momordica charantia] >XP_022153863.1 uncharacterized protein LOC111021275 [Momordica charantia] >XP_022153864.1 uncharacterized protein LOC111021275 [Momordica charantia]) HSP 1 Score: 136 bits (342), Expect = 1.08e-39 Identity = 71/80 (88.75%), Postives = 73/80 (91.25%), Query Frame = 0
BLAST of IVF0018777 vs. NCBI nr
Match: XP_022958637.1 (uncharacterized protein LOC111459803 [Cucurbita moschata] >XP_022958638.1 uncharacterized protein LOC111459803 [Cucurbita moschata] >XP_022958640.1 uncharacterized protein LOC111459803 [Cucurbita moschata] >XP_023533512.1 uncharacterized protein LOC111795367 [Cucurbita pepo subsp. pepo] >KAG7035790.1 hypothetical protein SDJN02_02588, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 127 bits (320), Expect = 1.89e-36 Identity = 66/78 (84.62%), Postives = 71/78 (91.03%), Query Frame = 0
BLAST of IVF0018777 vs. NCBI nr
Match: PON98040.1 (hypothetical protein TorRG33x02_061140 [Trema orientale]) HSP 1 Score: 102 bits (255), Expect = 2.42e-26 Identity = 55/78 (70.51%), Postives = 63/78 (80.77%), Query Frame = 0
BLAST of IVF0018777 vs. NCBI nr
Match: KAF7836940.1 (uncharacterized protein G2W53_005422 [Senna tora]) HSP 1 Score: 96.3 bits (238), Expect = 9.11e-24 Identity = 54/79 (68.35%), Postives = 64/79 (81.01%), Query Frame = 0
BLAST of IVF0018777 vs. TAIR 10
Match: AT1G55365.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13500.1); Has 29 Blast hits to 29 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 2.2e-09 Identity = 36/80 (45.00%), Postives = 47/80 (58.75%), Query Frame = 0
BLAST of IVF0018777 vs. TAIR 10
Match: AT5G56520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55365.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 57.4 bits (137), Expect = 6.5e-09 Identity = 33/77 (42.86%), Postives = 45/77 (58.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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