IVF0018777 (gene) Melon (IVF77) v1

Overview
NameIVF0018777
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr05: 148995 .. 149249 (+)
RNA-Seq ExpressionIVF0018777
SyntenyIVF0018777
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATTTAGCAGCTTAATAGTGTTATCGGTCGCTCATTTATCGGCGGATGTTTCGCAATCCATTGCTCGCTTTCCAGATCCCCTCACCAGCCACCAACTTCTTTACCTTCTCTTCGCTTTCCCTCTTCAACAGCTCTCTCGACTTGCCCTCTCTCTCTGGACCTTCTTCTGTGTTCCTCCACCTGGTTCTTTCTACTATTACTACTATTCCTCTGACTCCGATCTCTCTTCTTACGCCTATGCTTCCGATTGA

mRNA sequence

ATGGTATTTAGCAGCTTAATAGTGTTATCGGTCGCTCATTTATCGGCGGATGTTTCGCAATCCATTGCTCGCTTTCCAGATCCCCTCACCAGCCACCAACTTCTTTACCTTCTCTTCGCTTTCCCTCTTCAACAGCTCTCTCGACTTGCCCTCTCTCTCTGGACCTTCTTCTGTGTTCCTCCACCTGGTTCTTTCTACTATTACTACTATTCCTCTGACTCCGATCTCTCTTCTTACGCCTATGCTTCCGATTGA

Coding sequence (CDS)

ATGGTATTTAGCAGCTTAATAGTGTTATCGGTCGCTCATTTATCGGCGGATGTTTCGCAATCCATTGCTCGCTTTCCAGATCCCCTCACCAGCCACCAACTTCTTTACCTTCTCTTCGCTTTCCCTCTTCAACAGCTCTCTCGACTTGCCCTCTCTCTCTGGACCTTCTTCTGTGTTCCTCCACCTGGTTCTTTCTACTATTACTACTATTCCTCTGACTCCGATCTCTCTTCTTACGCCTATGCTTCCGATTGA

Protein sequence

MVFSSLIVLSVAHLSADVSQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTFFCVPPPGSFYYYYYSSDSDLSSYAYASD
Homology
BLAST of IVF0018777 vs. ExPASy TrEMBL
Match: A0A5A7T9K4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G001090 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.2e-34
Identity = 79/81 (97.53%), Postives = 81/81 (100.00%), Query Frame = 0

Query: 4   SSLIVLSVAHLSADVSQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTFFCVPPPG 63
           ++LIVLSVAHLSADVSQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTFFCVPPPG
Sbjct: 42  ANLIVLSVAHLSADVSQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTFFCVPPPG 101

Query: 64  SFYYYYYSSDSDLSSYAYASD 85
           SFYYYYYSSDSDLSSYAYASD
Sbjct: 102 SFYYYYYSSDSDLSSYAYASD 122

BLAST of IVF0018777 vs. ExPASy TrEMBL
Match: A0A0A0L0B8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G268060 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.5e-32
Identity = 75/78 (96.15%), Postives = 75/78 (96.15%), Query Frame = 0

Query: 7   IVLSVAHLSADVSQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTFFCVPPPGSFY 66
           IVLSVAHLSAD SQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWT FCVPPPGSFY
Sbjct: 63  IVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFY 122

Query: 67  YYYYSSDSDLSSYAYASD 85
           YYYYSSDSDLSSY YASD
Sbjct: 123 YYYYSSDSDLSSYDYASD 140

BLAST of IVF0018777 vs. ExPASy TrEMBL
Match: A0A6J1DKC2 (uncharacterized protein LOC111021275 OS=Momordica charantia OX=3673 GN=LOC111021275 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.0e-29
Identity = 71/80 (88.75%), Postives = 73/80 (91.25%), Query Frame = 0

Query: 1  MVFSSLIVLSVAHLSADVSQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTFFCVP 60
          MVFSSLIVLSVAHLSAD SQ IA FPD LTSHQLLYLLF FPLQQLSRLALS WTFFCVP
Sbjct: 1  MVFSSLIVLSVAHLSADASQCIACFPDRLTSHQLLYLLFGFPLQQLSRLALSFWTFFCVP 60

Query: 61 PPGSFYYYYYSSDSDLSSYA 81
          PPGSFYYYYYSSDSD SS++
Sbjct: 61 PPGSFYYYYYSSDSDASSFS 80

BLAST of IVF0018777 vs. ExPASy TrEMBL
Match: A0A6J1H2D5 (uncharacterized protein LOC111459803 OS=Cucurbita moschata OX=3662 GN=LOC111459803 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 7.0e-27
Identity = 66/78 (84.62%), Postives = 71/78 (91.03%), Query Frame = 0

Query: 1  MVFSSLIVLSVAHLSADVSQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTFFCVP 60
          MVF+SLIVLSVAHLSAD SQ IAR PD LTSHQLLY+LF++PLQQLSRLALS+WTF CVP
Sbjct: 1  MVFNSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVP 60

Query: 61 PPGSFYYYYYSSDSDLSS 79
          PPGSFYYYYYSSD D SS
Sbjct: 61 PPGSFYYYYYSSDYDSSS 78

BLAST of IVF0018777 vs. ExPASy TrEMBL
Match: A0A2P5FJR7 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_061140 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.4e-19
Identity = 54/75 (72.00%), Postives = 62/75 (82.67%), Query Frame = 0

Query: 1  MVFSSLIVLSVAHLSADVSQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTFFCVP 60
          MVF+SL+VLSVAH+SAD  Q +A FP+ L+SHQLL L+F FPLQQL RLAL LWTF C+P
Sbjct: 1  MVFNSLLVLSVAHVSADAWQCLACFPERLSSHQLLDLVFCFPLQQLGRLALCLWTFLCLP 60

Query: 61 PPGSFYYYYYSSDSD 76
          PP SFY Y YSSDSD
Sbjct: 61 PPDSFYSYAYSSDSD 75

BLAST of IVF0018777 vs. NCBI nr
Match: KAA0040112.1 (hypothetical protein E6C27_scaffold366G00870 [Cucumis melo var. makuwa] >TYK21737.1 hypothetical protein E5676_scaffold859G001090 [Cucumis melo var. makuwa])

HSP 1 Score: 153 bits (387), Expect = 4.21e-46
Identity = 79/81 (97.53%), Postives = 81/81 (100.00%), Query Frame = 0

Query: 4   SSLIVLSVAHLSADVSQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTFFCVPPPG 63
           ++LIVLSVAHLSADVSQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTFFCVPPPG
Sbjct: 42  ANLIVLSVAHLSADVSQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTFFCVPPPG 101

Query: 64  SFYYYYYSSDSDLSSYAYASD 84
           SFYYYYYSSDSDLSSYAYASD
Sbjct: 102 SFYYYYYSSDSDLSSYAYASD 122

BLAST of IVF0018777 vs. NCBI nr
Match: XP_022153861.1 (uncharacterized protein LOC111021275 [Momordica charantia] >XP_022153863.1 uncharacterized protein LOC111021275 [Momordica charantia] >XP_022153864.1 uncharacterized protein LOC111021275 [Momordica charantia])

HSP 1 Score: 136 bits (342), Expect = 1.08e-39
Identity = 71/80 (88.75%), Postives = 73/80 (91.25%), Query Frame = 0

Query: 1  MVFSSLIVLSVAHLSADVSQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTFFCVP 60
          MVFSSLIVLSVAHLSAD SQ IA FPD LTSHQLLYLLF FPLQQLSRLALS WTFFCVP
Sbjct: 1  MVFSSLIVLSVAHLSADASQCIACFPDRLTSHQLLYLLFGFPLQQLSRLALSFWTFFCVP 60

Query: 61 PPGSFYYYYYSSDSDLSSYA 80
          PPGSFYYYYYSSDSD SS++
Sbjct: 61 PPGSFYYYYYSSDSDASSFS 80

BLAST of IVF0018777 vs. NCBI nr
Match: XP_022958637.1 (uncharacterized protein LOC111459803 [Cucurbita moschata] >XP_022958638.1 uncharacterized protein LOC111459803 [Cucurbita moschata] >XP_022958640.1 uncharacterized protein LOC111459803 [Cucurbita moschata] >XP_023533512.1 uncharacterized protein LOC111795367 [Cucurbita pepo subsp. pepo] >KAG7035790.1 hypothetical protein SDJN02_02588, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 127 bits (320), Expect = 1.89e-36
Identity = 66/78 (84.62%), Postives = 71/78 (91.03%), Query Frame = 0

Query: 1  MVFSSLIVLSVAHLSADVSQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTFFCVP 60
          MVF+SLIVLSVAHLSAD SQ IAR PD LTSHQLLY+LF++PLQQLSRLALS+WTF CVP
Sbjct: 1  MVFNSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVP 60

Query: 61 PPGSFYYYYYSSDSDLSS 78
          PPGSFYYYYYSSD D SS
Sbjct: 61 PPGSFYYYYYSSDYDSSS 78

BLAST of IVF0018777 vs. NCBI nr
Match: PON98040.1 (hypothetical protein TorRG33x02_061140 [Trema orientale])

HSP 1 Score: 102 bits (255), Expect = 2.42e-26
Identity = 55/78 (70.51%), Postives = 63/78 (80.77%), Query Frame = 0

Query: 1  MVFSSLIVLSVAHLSADVSQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTFFCVP 60
          MVF+SL+VLSVAH+SAD  Q +A FP+ L+SHQLL L+F FPLQQL RLAL LWTF C+P
Sbjct: 1  MVFNSLLVLSVAHVSADAWQCLACFPERLSSHQLLDLVFCFPLQQLGRLALCLWTFLCLP 60

Query: 61 PPGSFYYYYYSSDSDLSS 78
          PP SFY Y YSSDSD  S
Sbjct: 61 PPDSFYSYAYSSDSDDDS 78

BLAST of IVF0018777 vs. NCBI nr
Match: KAF7836940.1 (uncharacterized protein G2W53_005422 [Senna tora])

HSP 1 Score: 96.3 bits (238), Expect = 9.11e-24
Identity = 54/79 (68.35%), Postives = 64/79 (81.01%), Query Frame = 0

Query: 1  MVFSSLIVLSVAHLSADVSQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTFFCVP 60
          MVF+S+IV+SVAH+SADV QS+A  PD L++H LL L+  FPLQQL RLAL LWTFFC+P
Sbjct: 1  MVFNSVIVVSVAHVSADVWQSLACIPDRLSTHHLLDLVCCFPLQQLGRLALCLWTFFCLP 60

Query: 61 PPGSFYYYYYSS-DSDLSS 78
           P S+Y YYYSS DSD SS
Sbjct: 61 QPDSYYAYYYSSSDSDDSS 79

BLAST of IVF0018777 vs. TAIR 10
Match: AT1G55365.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13500.1); Has 29 Blast hits to 29 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 2.2e-09
Identity = 36/80 (45.00%), Postives = 47/80 (58.75%), Query Frame = 0

Query: 1  MVFSSLIVLSVAHLSADVSQSIARFPDP--LTSHQLLYLLFAFPLQQLSRLALSLWTFFC 60
          MVF+S +V++VA +S D  Q I R P    + + QL  +   FP+ QLSR  L LWTF C
Sbjct: 1  MVFNSAMVMAVAEVSTDTWQLIWRVPSSQRIDTEQLFDIAVCFPIHQLSRFVLCLWTFMC 60

Query: 61 VPPPGSFYYYYYSSDSDLSS 79
          +P   SFY Y Y + S  SS
Sbjct: 61 LPSSDSFYSYTYETLSASSS 80

BLAST of IVF0018777 vs. TAIR 10
Match: AT5G56520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55365.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 6.5e-09
Identity = 33/77 (42.86%), Postives = 45/77 (58.44%), Query Frame = 0

Query: 1  MVFSSLIVLSVAHLSADVSQSIARFP--DPLTSHQLLYLLFAFPLQQLSRLALSLWTFFC 60
          MVF    V+SVAH+SA++ Q +   P  D ++S ++L L+  FPLQQL R  L  W + C
Sbjct: 1  MVFRGDTVVSVAHISAEIFQRLRWIPPSDRISSGEMLQLVCCFPLQQLGRFVLWFWNYIC 60

Query: 61 VPPPGSFYYYYYSSDSD 76
          VPPP   Y+     D D
Sbjct: 61 VPPPEILYFDGRRDDDD 77

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7T9K41.2e-3497.53Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0L0B82.5e-3296.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G268060 PE=4 SV=1[more]
A0A6J1DKC22.0e-2988.75uncharacterized protein LOC111021275 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A6J1H2D57.0e-2784.62uncharacterized protein LOC111459803 OS=Cucurbita moschata OX=3662 GN=LOC1114598... [more]
A0A2P5FJR72.4e-1972.00Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_061140 PE=4 SV... [more]
Match NameE-valueIdentityDescription
KAA0040112.14.21e-4697.53hypothetical protein E6C27_scaffold366G00870 [Cucumis melo var. makuwa] >TYK2173... [more]
XP_022153861.11.08e-3988.75uncharacterized protein LOC111021275 [Momordica charantia] >XP_022153863.1 uncha... [more]
XP_022958637.11.89e-3684.62uncharacterized protein LOC111459803 [Cucurbita moschata] >XP_022958638.1 unchar... [more]
PON98040.12.42e-2670.51hypothetical protein TorRG33x02_061140 [Trema orientale][more]
KAF7836940.19.11e-2468.35uncharacterized protein G2W53_005422 [Senna tora][more]
Match NameE-valueIdentityDescription
AT1G55365.12.2e-0945.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G56520.16.5e-0942.86unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35104:SF6OS03G0807000 PROTEINcoord: 1..77
NoneNo IPR availablePANTHERPTHR35104OS03G0807000 PROTEINcoord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0018777.1IVF0018777.1mRNA