IVF0018700 (gene) Melon (IVF77) v1

Overview
NameIVF0018700
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionchromosome transmission fidelity protein 8 homolog
Locationchr09: 19728131 .. 19730358 (-)
RNA-Seq ExpressionIVF0018700
SyntenyIVF0018700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTATTTCCAAAAGAGCGGGAAGAGCTCCCTTATTTCCCGCCATTTTCCATCTTCTCGTCGGAGCTTCACAATTCTTTATGTTTTTCTCTCTCAGAGCTGAGGAACCTTAAATCGGAAGCCGTAGAAAGATGCAGATTAAGCTGAAATGTAACTGTGGCGAAACCAAATGCTTGGAATGGGCCCTCGTTGAGTTACAAGGCGTAGTTGAACCTCAATCCACCTTCCAAGATCGCATTCAAAACCTCGAAATCGGCATTCTATGTCGGCCGTCTGCTCAGGTGCTTTTTCGTCAGCCCCTGTTGTAACCCTAGAATTGGATTTCCATTTTTTTTTTTTTTGCAACCTAATTGATGATGAATTTGCTAAATTGGTCTCCAAGAGTGATTTTCGTTTCGTGAACTCCTTTTGTTTTTCCATTACTGGTGATTTCTAACATTAAATTAGTTGCTTCCAATTCTTTCAATTGATTGAGGGGTTGTTTTTTTTTGGGGTTTGAAGGAAATGTATACTTTTACGGTAGGGTACCATGAGCTGACAGGAAGCAAAGTTTCTTTGAAGAAGCCATTGTTGGTGTTGAAGAAAACGAGGTCTGTGGATGAGGATCAGAGTAGCGATATTAAATCGGGTAATGCAGAGTTGGAAGTGATTGGGATAATCAGGCAGCGGATTCTGTTTAAGACCAGACCAAAGGCACTCATATCCAGTAAGTTTCTTAAAGTTGGATGGATTTTGAAAATTTTACTTTGAAAGCAAAAGCTTATGCAATAACGAATTGATTGGTAAAGAAAAATTTAGTTTGAGAATGGATAATATTGAACCACATATAAACAAATCTATTATGAATAATGTAAATCTTGCAATATCAGTGGAAGTTTCATCGTTGCTTCTAGACGAGGAACATAATAAGTAACGGGGAACAGTCTCAAAGTCGATAGATTTGGATATAGACTTGTATTATGGACCCTAAACTCAAATTAAGTCACTTTCCAAAGGTTATCTTGCTATTTTTCTCTTTCTAAAGAACCTGCCGCTATAGGATGTTTTCAAAATATTAGAAGAGGAGTAATCCCATAGGAGTTCAAGGAAACAATGAACTATCCTTTGATTTCAAATTAATCATGGTCCAAACCATTTTAGTTTGAGTGTAGTAACTCTAGCTAGGTTATTTTTTAATATTTTCTGGTGTGAGGATGGAGCAAAGGTTGTGAATGGTACACTACTTTGAGAGTCTTTTTGTAATCTAAGAAGCACTTATACAAGACATGGACCCAACGAAAAGTTGTTTTTTTTCTGATTTAGGACACGATATGGAAAGTATACACGTATTAGAATATACAATTTAAAATATACATATCGTTTTTATACTCGAAAAATAATTGAATTAGATGGGTCAATGTATTCATTGTTTAATAAATTAGTTTGATGTATTTCTCACTCAAAATTTATTATTATTCTCACATATGTGTCTTTTCAATCTACTCAATTCTATGAATGACTAACACATTTATTACATGTTTGATAAGTATTGGAGTGTCTAAGTGTTTGACACGTGTTGGATGTAGTCACACAAGCTAGCCAAACTAAAATGACCTTGCTTCTTAGATTGAGATGGAGGATGGAATTTTGTGTCATTGTAATAATTTTTCATTATGGGTTTGTTTGTAGTGGGTTCTATTTTTCTCTAATTTTCAAGTTTTTACTTAAATTCTTATGTTTTCTATTTTTGTTGTTTTCTTTAAACTTTCAATCGGTCCCTACTTATTTATGCTATAGAAGTGGTAGGTTTTTCCAACAAAAGCCTTGATTGTTGAGGGTGGATTTTGGTAATGTTTCCATAACCTCATAGTTTGTCTGTTTTTCAAATGTTCTTGTTGTTTCACTTTTTGGATGATTTTCTCAATGAATTGAATGCATGTTAAAGTACCTTTTCAAAAAAAAAAAAAAGGAATGCATGTTAAAGTAACCTGGCCATCATCTTGGATTTGGCCTTGAGTATGTAAAGGCCAAATTAACAGAATCTGTTCAATAAGTGGGTACACTGTTATGAATATCAAGAATAACATTAGACATTTTTTATTTTCTGTATAGAGATATTTTCTTTCACTTCTTTTCTCTTCTTAGGTGCGATGTTTAATCCTACTATGGTTTTACTTCTTCAGAACCAGAGCCATTGGTTAAGGAAAGATCCCGTGCTTCAGGATCTGCAGTGAAAGGCCAAACAACATGA

mRNA sequence

GTTATTTCCAAAAGAGCGGGAAGAGCTCCCTTATTTCCCGCCATTTTCCATCTTCTCGTCGGAGCTTCACAATTCTTTATGTTTTTCTCTCTCAGAGCTGAGGAACCTTAAATCGGAAGCCGTAGAAAGATGCAGATTAAGCTGAAATGTAACTGTGGCGAAACCAAATGCTTGGAATGGGCCCTCGTTGAGTTACAAGGCGTAGTTGAACCTCAATCCACCTTCCAAGATCGCATTCAAAACCTCGAAATCGGCATTCTATGTCGGCCGTCTGCTCAGGAAATGTATACTTTTACGGTAGGGTACCATGAGCTGACAGGAAGCAAAGTTTCTTTGAAGAAGCCATTGTTGGTGTTGAAGAAAACGAGGTCTGTGGATGAGGATCAGAGTAGCGATATTAAATCGGGTAATGCAGAGTTGGAAGTGATTGGGATAATCAGGCAGCGGATTCTGTTTAAGACCAGACCAAAGGCACTCATATCCAAACCAGAGCCATTGGTTAAGGAAAGATCCCGTGCTTCAGGATCTGCAGTGAAAGGCCAAACAACATGA

Coding sequence (CDS)

ATGCAGATTAAGCTGAAATGTAACTGTGGCGAAACCAAATGCTTGGAATGGGCCCTCGTTGAGTTACAAGGCGTAGTTGAACCTCAATCCACCTTCCAAGATCGCATTCAAAACCTCGAAATCGGCATTCTATGTCGGCCGTCTGCTCAGGAAATGTATACTTTTACGGTAGGGTACCATGAGCTGACAGGAAGCAAAGTTTCTTTGAAGAAGCCATTGTTGGTGTTGAAGAAAACGAGGTCTGTGGATGAGGATCAGAGTAGCGATATTAAATCGGGTAATGCAGAGTTGGAAGTGATTGGGATAATCAGGCAGCGGATTCTGTTTAAGACCAGACCAAAGGCACTCATATCCAAACCAGAGCCATTGGTTAAGGAAAGATCCCGTGCTTCAGGATCTGCAGTGAAAGGCCAAACAACATGA

Protein sequence

MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
Homology
BLAST of IVF0018700 vs. ExPASy Swiss-Prot
Match: Q54JL4 (Putative uncharacterized protein DDB_G0287975 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0287975 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-08
Identity = 43/132 (32.58%), Postives = 68/132 (51.52%), Query Frame = 0

Query: 1   MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILC-RPSAQEMYTFTVGY 60
           MQI +K     T   EW +++LQG +E    +   ++N  +GIL  +P+ ++ ++F +G 
Sbjct: 1   MQIFIK---ESTNKKEWFILDLQGHLE----YTGDLKNETLGILTKKPNTKDDFSFQIGN 60

Query: 61  HELTGSKVSLKKPLLVLKKTR-------------SVD-EDQSSDIKSGNAELEVIGIIRQ 118
             L G +V LKKPLLV+KK++             +VD +D   + K    E  + GI   
Sbjct: 61  SVLVGKRVPLKKPLLVIKKSKLNNNNNSNNNNKMAVDNKDNKDNEKDKEVEYSIEGICND 120

BLAST of IVF0018700 vs. ExPASy Swiss-Prot
Match: P0CG13 (Chromosome transmission fidelity protein 8 homolog OS=Homo sapiens OX=9606 GN=CHTF8 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.2e-06
Identity = 34/103 (33.01%), Postives = 53/103 (51.46%), Query Frame = 0

Query: 16  EWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLV 75
           EW L+ELQG +E  + +   +    +G L   + + +    VG+H L G  + L+KP  V
Sbjct: 16  EWVLMELQGEIE--ARYSTGLAGNLLGDL-HYTTEGIPVLIVGHHILYGKIIHLEKPFAV 75

Query: 76  LKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALIS 119
           L K    D+D     +       V  +I+ +ILFKTRPK +I+
Sbjct: 76  LVKHTPGDQDCDELGRETGTRYLVTALIKDKILFKTRPKPIIT 115

BLAST of IVF0018700 vs. ExPASy Swiss-Prot
Match: P0CG15 (Chromosome transmission fidelity protein 8 homolog OS=Mus musculus OX=10090 GN=Chtf8 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.2e-06
Identity = 33/103 (32.04%), Postives = 53/103 (51.46%), Query Frame = 0

Query: 16  EWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLV 75
           EW L+ELQG +E  + +   +    +G L   + + +    VG+H L G  + L+KP  V
Sbjct: 16  EWVLMELQGEIE--ARYSTGLAGNLLGDL-HYTTEGIPVLIVGHHILYGKTIHLEKPFAV 75

Query: 76  LKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALIS 119
           L K     +D     +    +  V  +I+ +ILFKTRPK +I+
Sbjct: 76  LVKHTPGKQDCDEPGRGTGTQYLVTALIKNKILFKTRPKPIIT 115

BLAST of IVF0018700 vs. ExPASy Swiss-Prot
Match: Q65ZA6 (Chromosome transmission fidelity protein 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ctf8 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.9e-06
Identity = 37/93 (39.78%), Postives = 52/93 (55.91%), Query Frame = 0

Query: 25  VVEPQSTFQDRIQNLEIG----ILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTR 84
           +VE Q+T + +  +L IG    I  + S ++  T TVG   + G   SLKKPL VL+KT 
Sbjct: 16  LVEVQATLERKADSLHIGDLKIIKEKNSEKKKATLTVGNQYMEGVVESLKKPLAVLQKTN 75

Query: 85  SVDEDQSSDIKSGNAELEVIGIIRQRILFKTRP 114
           +   D  S   S + EL+   IIR+RI F +RP
Sbjct: 76  ADPVDVYS---SPSHELKCCSIIRERIRFSSRP 105

BLAST of IVF0018700 vs. ExPASy Swiss-Prot
Match: P0C6T1 (Chromosome transmission fidelity protein 8 homolog OS=Rattus norvegicus OX=10116 GN=Chtf8 PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 8.3e-06
Identity = 33/103 (32.04%), Postives = 53/103 (51.46%), Query Frame = 0

Query: 16  EWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLV 75
           EW L+ELQG +E  + +   +    +G L   + + +    VG+H L G  + L+KP  V
Sbjct: 16  EWVLMELQGEIE--ARYSTGLAGNLLGDL-HYTTEGIPVLIVGHHILYGKIIHLEKPFAV 75

Query: 76  LKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALIS 119
           L K     +D     +    +  V  +I+ +ILFKTRPK +I+
Sbjct: 76  LVKHTPGKQDCDELGRETGTQYLVTALIKNKILFKTRPKPIIT 115

BLAST of IVF0018700 vs. ExPASy TrEMBL
Match: A0A5A7UJ36 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00960 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 4.5e-71
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0

Query: 1   MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60
           MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH
Sbjct: 1   MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60

Query: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 EPLVKERSRASGSAVKGQTT 141
           EPLVKERSRASGSAVKGQTT
Sbjct: 121 EPLVKERSRASGSAVKGQTT 140

BLAST of IVF0018700 vs. ExPASy TrEMBL
Match: A0A5D3BQB7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00430 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0

Query: 1   MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60
           MQIKLKCNCGETKCLEWA+VELQGVVE QSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH
Sbjct: 1   MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60

Query: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 EPLVKERSRASGSAVKGQTT 141
           EPLVKERSRASGSAVKGQTT
Sbjct: 121 EPLVKERSRASGSAVKGQTT 140

BLAST of IVF0018700 vs. ExPASy TrEMBL
Match: A0A1S3CT18 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103504632 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0

Query: 1   MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60
           MQIKLKCNCGETKCLEWA+VELQGVVE QSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH
Sbjct: 1   MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60

Query: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 EPLVKERSRASGSAVKGQTT 141
           EPLVKERSRASGSAVKGQTT
Sbjct: 121 EPLVKERSRASGSAVKGQTT 140

BLAST of IVF0018700 vs. ExPASy TrEMBL
Match: A0A0A0KPT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172910 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.1e-68
Identity = 132/140 (94.29%), Postives = 138/140 (98.57%), Query Frame = 0

Query: 1   MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60
           M+IKLKCNCGETKCLEWA+VELQGVVEPQSTFQDR+QNLEIGILCRPSAQE+YTFTVGYH
Sbjct: 1   MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60

Query: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSK+SLKKPLLVLKKTRSVDEDQSSD KSGNAELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 EPLVKERSRASGSAVKGQTT 141
           +PLVKERSRASGSAV GQTT
Sbjct: 121 QPLVKERSRASGSAVTGQTT 140

BLAST of IVF0018700 vs. ExPASy TrEMBL
Match: A0A6J1I4S6 (Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111469152 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.3e-59
Identity = 117/140 (83.57%), Postives = 126/140 (90.00%), Query Frame = 0

Query: 1   MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60
           MQIK+KCNCGETKCLEWA+VELQG+VE Q +F+DR Q LEIG+LCRPSAQE+YTFTVGYH
Sbjct: 1   MQIKVKCNCGETKCLEWAVVELQGIVEAQPSFEDRFQTLEIGVLCRPSAQEVYTFTVGYH 60

Query: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSKV LKKPLLVLKK + VDEDQS D KS  AELEVIGIIRQR LFKTRPKALISKP
Sbjct: 61  ELTGSKVPLKKPLLVLKKKKCVDEDQSGDTKSATAELEVIGIIRQRFLFKTRPKALISKP 120

Query: 121 EPLVKERSRASGSAVKGQTT 141
           +P VKERSRASGSAV GQTT
Sbjct: 121 QPSVKERSRASGSAVTGQTT 140

BLAST of IVF0018700 vs. NCBI nr
Match: KAA0055164.1 (hypothetical protein E6C27_scaffold231G00960 [Cucumis melo var. makuwa])

HSP 1 Score: 278 bits (710), Expect = 4.27e-94
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0

Query: 1   MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60
           MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH
Sbjct: 1   MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60

Query: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 EPLVKERSRASGSAVKGQTT 140
           EPLVKERSRASGSAVKGQTT
Sbjct: 121 EPLVKERSRASGSAVKGQTT 140

BLAST of IVF0018700 vs. NCBI nr
Match: XP_008467231.1 (PREDICTED: putative uncharacterized protein DDB_G0287975 [Cucumis melo] >TYK00299.1 hypothetical protein E5676_scaffold1728G00430 [Cucumis melo var. makuwa])

HSP 1 Score: 273 bits (698), Expect = 2.89e-92
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0

Query: 1   MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60
           MQIKLKCNCGETKCLEWA+VELQGVVE QSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH
Sbjct: 1   MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60

Query: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 EPLVKERSRASGSAVKGQTT 140
           EPLVKERSRASGSAVKGQTT
Sbjct: 121 EPLVKERSRASGSAVKGQTT 140

BLAST of IVF0018700 vs. NCBI nr
Match: XP_004143632.1 (putative uncharacterized protein DDB_G0287975 isoform X1 [Cucumis sativus] >KGN50412.1 hypothetical protein Csa_000393 [Cucumis sativus])

HSP 1 Score: 267 bits (683), Expect = 5.61e-90
Identity = 132/140 (94.29%), Postives = 138/140 (98.57%), Query Frame = 0

Query: 1   MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60
           M+IKLKCNCGETKCLEWA+VELQGVVEPQSTFQDR+QNLEIGILCRPSAQE+YTFTVGYH
Sbjct: 1   MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60

Query: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSK+SLKKPLLVLKKTRSVDEDQSSD KSGNAELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 EPLVKERSRASGSAVKGQTT 140
           +PLVKERSRASGSAV GQTT
Sbjct: 121 QPLVKERSRASGSAVTGQTT 140

BLAST of IVF0018700 vs. NCBI nr
Match: XP_038906846.1 (putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906847.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906848.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906849.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906850.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida])

HSP 1 Score: 262 bits (670), Expect = 5.39e-88
Identity = 131/140 (93.57%), Postives = 135/140 (96.43%), Query Frame = 0

Query: 1   MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60
           MQIKLKCNCGETKCLEWA+VELQGVVEPQSTFQDR+QNLEIGILCRPSAQE+YTFTVGYH
Sbjct: 1   MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60

Query: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSKV LKKPLLVLKK RSVDEDQSSD KS NAELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKVPLKKPLLVLKKMRSVDEDQSSDAKSANAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 EPLVKERSRASGSAVKGQTT 140
           +PLVKERSRASGSAV GQTT
Sbjct: 121 QPLVKERSRASGSAVTGQTT 140

BLAST of IVF0018700 vs. NCBI nr
Match: XP_023551664.1 (putative uncharacterized protein DDB_G0287975 [Cucurbita pepo subsp. pepo] >KAG7017126.1 hypothetical protein SDJN02_22238 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 239 bits (610), Expect = 7.59e-79
Identity = 117/140 (83.57%), Postives = 127/140 (90.71%), Query Frame = 0

Query: 1   MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60
           MQIK+KCNCGETKCLEWA+VELQG+VE Q +F+DR+Q LEIG+LCRPSAQE+YTFTVGYH
Sbjct: 1   MQIKVKCNCGETKCLEWAVVELQGIVEAQPSFEDRLQTLEIGVLCRPSAQEVYTFTVGYH 60

Query: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSKV LKKPLLVLKK + VDEDQS D KS  AELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKVPLKKPLLVLKKKKCVDEDQSGDTKSATAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 EPLVKERSRASGSAVKGQTT 140
           +P VKERSRASGSAV GQ T
Sbjct: 121 QPSVKERSRASGSAVTGQAT 140

BLAST of IVF0018700 vs. TAIR 10
Match: AT5G52220.1 (CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607); Has 127 Blast hits to 127 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 17; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 149.1 bits (375), Expect = 2.7e-36
Identity = 77/119 (64.71%), Postives = 90/119 (75.63%), Query Frame = 0

Query: 1   MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCR-PSAQEMYTFTVGY 60
           M+I++KC CGE +C EWA+VELQGVVE Q++FQ  IQNLEIG LC   S+Q  YTFTVGY
Sbjct: 1   MEIRVKCRCGEEECSEWAIVELQGVVETQASFQGSIQNLEIGRLCHSDSSQGTYTFTVGY 60

Query: 61  HELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALIS 119
           HEL GSKV+LKKPLLVLKK       Q  ++     ELEV+GIIR +ILFKTRPK LIS
Sbjct: 61  HELVGSKVTLKKPLLVLKKL------QFDEVSGKATELEVVGIIRTKILFKTRPKPLIS 113

BLAST of IVF0018700 vs. TAIR 10
Match: AT5G52220.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607). )

HSP 1 Score: 149.1 bits (375), Expect = 2.7e-36
Identity = 77/119 (64.71%), Postives = 90/119 (75.63%), Query Frame = 0

Query: 1   MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCR-PSAQEMYTFTVGY 60
           M+I++KC CGE +C EWA+VELQGVVE Q++FQ  IQNLEIG LC   S+Q  YTFTVGY
Sbjct: 1   MEIRVKCRCGEEECSEWAIVELQGVVETQASFQGSIQNLEIGRLCHSDSSQGTYTFTVGY 60

Query: 61  HELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALIS 119
           HEL GSKV+LKKPLLVLKK       Q  ++     ELEV+GIIR +ILFKTRPK LIS
Sbjct: 61  HELVGSKVTLKKPLLVLKKL------QFDEVSGKATELEVVGIIRTKILFKTRPKPLIS 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q54JL41.8e-0832.58Putative uncharacterized protein DDB_G0287975 OS=Dictyostelium discoideum OX=446... [more]
P0CG132.2e-0633.01Chromosome transmission fidelity protein 8 homolog OS=Homo sapiens OX=9606 GN=CH... [more]
P0CG152.2e-0632.04Chromosome transmission fidelity protein 8 homolog OS=Mus musculus OX=10090 GN=C... [more]
Q65ZA64.9e-0639.78Chromosome transmission fidelity protein 8 OS=Schizosaccharomyces pombe (strain ... [more]
P0C6T18.3e-0632.04Chromosome transmission fidelity protein 8 homolog OS=Rattus norvegicus OX=10116... [more]
Match NameE-valueIdentityDescription
A0A5A7UJ364.5e-71100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BQB71.1e-6998.57Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CT181.1e-6998.57Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103504632 PE=4 SV=1[more]
A0A0A0KPT46.1e-6894.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172910 PE=4 SV=1[more]
A0A6J1I4S62.3e-5983.57Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111469152 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0055164.14.27e-94100.00hypothetical protein E6C27_scaffold231G00960 [Cucumis melo var. makuwa][more]
XP_008467231.12.89e-9298.57PREDICTED: putative uncharacterized protein DDB_G0287975 [Cucumis melo] >TYK0029... [more]
XP_004143632.15.61e-9094.29putative uncharacterized protein DDB_G0287975 isoform X1 [Cucumis sativus] >KGN5... [more]
XP_038906846.15.39e-8893.57putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906847.... [more]
XP_023551664.17.59e-7983.57putative uncharacterized protein DDB_G0287975 [Cucurbita pepo subsp. pepo] >KAG7... [more]
Match NameE-valueIdentityDescription
AT5G52220.12.7e-3664.71CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro... [more]
AT5G52220.22.7e-3664.71FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018607Chromosome transmission fidelity protein 8PFAMPF09696Ctf8coord: 47..114
e-value: 4.2E-10
score: 40.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..140
NoneNo IPR availablePANTHERPTHR47475CHROMOSOME TRANSMISSION FIDELITY PROTEIN 8coord: 1..132

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0018700.1IVF0018700.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007064 mitotic sister chromatid cohesion
cellular_component GO:0031390 Ctf18 RFC-like complex