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IVF0018700 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTATTTCCAAAAGAGCGGGAAGAGCTCCCTTATTTCCCGCCATTTTCCATCTTCTCGTCGGAGCTTCACAATTCTTTATGTTTTTCTCTCTCAGAGCTGAGGAACCTTAAATCGGAAGCCGTAGAAAGATGCAGATTAAGCTGAAATGTAACTGTGGCGAAACCAAATGCTTGGAATGGGCCCTCGTTGAGTTACAAGGCGTAGTTGAACCTCAATCCACCTTCCAAGATCGCATTCAAAACCTCGAAATCGGCATTCTATGTCGGCCGTCTGCTCAGGTGCTTTTTCGTCAGCCCCTGTTGTAACCCTAGAATTGGATTTCCATTTTTTTTTTTTTTGCAACCTAATTGATGATGAATTTGCTAAATTGGTCTCCAAGAGTGATTTTCGTTTCGTGAACTCCTTTTGTTTTTCCATTACTGGTGATTTCTAACATTAAATTAGTTGCTTCCAATTCTTTCAATTGATTGAGGGGTTGTTTTTTTTTGGGGTTTGAAGGAAATGTATACTTTTACGGTAGGGTACCATGAGCTGACAGGAAGCAAAGTTTCTTTGAAGAAGCCATTGTTGGTGTTGAAGAAAACGAGGTCTGTGGATGAGGATCAGAGTAGCGATATTAAATCGGGTAATGCAGAGTTGGAAGTGATTGGGATAATCAGGCAGCGGATTCTGTTTAAGACCAGACCAAAGGCACTCATATCCAGTAAGTTTCTTAAAGTTGGATGGATTTTGAAAATTTTACTTTGAAAGCAAAAGCTTATGCAATAACGAATTGATTGGTAAAGAAAAATTTAGTTTGAGAATGGATAATATTGAACCACATATAAACAAATCTATTATGAATAATGTAAATCTTGCAATATCAGTGGAAGTTTCATCGTTGCTTCTAGACGAGGAACATAATAAGTAACGGGGAACAGTCTCAAAGTCGATAGATTTGGATATAGACTTGTATTATGGACCCTAAACTCAAATTAAGTCACTTTCCAAAGGTTATCTTGCTATTTTTCTCTTTCTAAAGAACCTGCCGCTATAGGATGTTTTCAAAATATTAGAAGAGGAGTAATCCCATAGGAGTTCAAGGAAACAATGAACTATCCTTTGATTTCAAATTAATCATGGTCCAAACCATTTTAGTTTGAGTGTAGTAACTCTAGCTAGGTTATTTTTTAATATTTTCTGGTGTGAGGATGGAGCAAAGGTTGTGAATGGTACACTACTTTGAGAGTCTTTTTGTAATCTAAGAAGCACTTATACAAGACATGGACCCAACGAAAAGTTGTTTTTTTTCTGATTTAGGACACGATATGGAAAGTATACACGTATTAGAATATACAATTTAAAATATACATATCGTTTTTATACTCGAAAAATAATTGAATTAGATGGGTCAATGTATTCATTGTTTAATAAATTAGTTTGATGTATTTCTCACTCAAAATTTATTATTATTCTCACATATGTGTCTTTTCAATCTACTCAATTCTATGAATGACTAACACATTTATTACATGTTTGATAAGTATTGGAGTGTCTAAGTGTTTGACACGTGTTGGATGTAGTCACACAAGCTAGCCAAACTAAAATGACCTTGCTTCTTAGATTGAGATGGAGGATGGAATTTTGTGTCATTGTAATAATTTTTCATTATGGGTTTGTTTGTAGTGGGTTCTATTTTTCTCTAATTTTCAAGTTTTTACTTAAATTCTTATGTTTTCTATTTTTGTTGTTTTCTTTAAACTTTCAATCGGTCCCTACTTATTTATGCTATAGAAGTGGTAGGTTTTTCCAACAAAAGCCTTGATTGTTGAGGGTGGATTTTGGTAATGTTTCCATAACCTCATAGTTTGTCTGTTTTTCAAATGTTCTTGTTGTTTCACTTTTTGGATGATTTTCTCAATGAATTGAATGCATGTTAAAGTACCTTTTCAAAAAAAAAAAAAAGGAATGCATGTTAAAGTAACCTGGCCATCATCTTGGATTTGGCCTTGAGTATGTAAAGGCCAAATTAACAGAATCTGTTCAATAAGTGGGTACACTGTTATGAATATCAAGAATAACATTAGACATTTTTTATTTTCTGTATAGAGATATTTTCTTTCACTTCTTTTCTCTTCTTAGGTGCGATGTTTAATCCTACTATGGTTTTACTTCTTCAGAACCAGAGCCATTGGTTAAGGAAAGATCCCGTGCTTCAGGATCTGCAGTGAAAGGCCAAACAACATGA GTTATTTCCAAAAGAGCGGGAAGAGCTCCCTTATTTCCCGCCATTTTCCATCTTCTCGTCGGAGCTTCACAATTCTTTATGTTTTTCTCTCTCAGAGCTGAGGAACCTTAAATCGGAAGCCGTAGAAAGATGCAGATTAAGCTGAAATGTAACTGTGGCGAAACCAAATGCTTGGAATGGGCCCTCGTTGAGTTACAAGGCGTAGTTGAACCTCAATCCACCTTCCAAGATCGCATTCAAAACCTCGAAATCGGCATTCTATGTCGGCCGTCTGCTCAGGAAATGTATACTTTTACGGTAGGGTACCATGAGCTGACAGGAAGCAAAGTTTCTTTGAAGAAGCCATTGTTGGTGTTGAAGAAAACGAGGTCTGTGGATGAGGATCAGAGTAGCGATATTAAATCGGGTAATGCAGAGTTGGAAGTGATTGGGATAATCAGGCAGCGGATTCTGTTTAAGACCAGACCAAAGGCACTCATATCCAAACCAGAGCCATTGGTTAAGGAAAGATCCCGTGCTTCAGGATCTGCAGTGAAAGGCCAAACAACATGA ATGCAGATTAAGCTGAAATGTAACTGTGGCGAAACCAAATGCTTGGAATGGGCCCTCGTTGAGTTACAAGGCGTAGTTGAACCTCAATCCACCTTCCAAGATCGCATTCAAAACCTCGAAATCGGCATTCTATGTCGGCCGTCTGCTCAGGAAATGTATACTTTTACGGTAGGGTACCATGAGCTGACAGGAAGCAAAGTTTCTTTGAAGAAGCCATTGTTGGTGTTGAAGAAAACGAGGTCTGTGGATGAGGATCAGAGTAGCGATATTAAATCGGGTAATGCAGAGTTGGAAGTGATTGGGATAATCAGGCAGCGGATTCTGTTTAAGACCAGACCAAAGGCACTCATATCCAAACCAGAGCCATTGGTTAAGGAAAGATCCCGTGCTTCAGGATCTGCAGTGAAAGGCCAAACAACATGA MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT Homology
BLAST of IVF0018700 vs. ExPASy Swiss-Prot
Match: Q54JL4 (Putative uncharacterized protein DDB_G0287975 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0287975 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.8e-08 Identity = 43/132 (32.58%), Postives = 68/132 (51.52%), Query Frame = 0
BLAST of IVF0018700 vs. ExPASy Swiss-Prot
Match: P0CG13 (Chromosome transmission fidelity protein 8 homolog OS=Homo sapiens OX=9606 GN=CHTF8 PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.2e-06 Identity = 34/103 (33.01%), Postives = 53/103 (51.46%), Query Frame = 0
BLAST of IVF0018700 vs. ExPASy Swiss-Prot
Match: P0CG15 (Chromosome transmission fidelity protein 8 homolog OS=Mus musculus OX=10090 GN=Chtf8 PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.2e-06 Identity = 33/103 (32.04%), Postives = 53/103 (51.46%), Query Frame = 0
BLAST of IVF0018700 vs. ExPASy Swiss-Prot
Match: Q65ZA6 (Chromosome transmission fidelity protein 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ctf8 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 4.9e-06 Identity = 37/93 (39.78%), Postives = 52/93 (55.91%), Query Frame = 0
BLAST of IVF0018700 vs. ExPASy Swiss-Prot
Match: P0C6T1 (Chromosome transmission fidelity protein 8 homolog OS=Rattus norvegicus OX=10116 GN=Chtf8 PE=3 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 8.3e-06 Identity = 33/103 (32.04%), Postives = 53/103 (51.46%), Query Frame = 0
BLAST of IVF0018700 vs. ExPASy TrEMBL
Match: A0A5A7UJ36 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00960 PE=4 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 4.5e-71 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of IVF0018700 vs. ExPASy TrEMBL
Match: A0A5D3BQB7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00430 PE=4 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of IVF0018700 vs. ExPASy TrEMBL
Match: A0A1S3CT18 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103504632 PE=4 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of IVF0018700 vs. ExPASy TrEMBL
Match: A0A0A0KPT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172910 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 6.1e-68 Identity = 132/140 (94.29%), Postives = 138/140 (98.57%), Query Frame = 0
BLAST of IVF0018700 vs. ExPASy TrEMBL
Match: A0A6J1I4S6 (Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111469152 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 2.3e-59 Identity = 117/140 (83.57%), Postives = 126/140 (90.00%), Query Frame = 0
BLAST of IVF0018700 vs. NCBI nr
Match: KAA0055164.1 (hypothetical protein E6C27_scaffold231G00960 [Cucumis melo var. makuwa]) HSP 1 Score: 278 bits (710), Expect = 4.27e-94 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of IVF0018700 vs. NCBI nr
Match: XP_008467231.1 (PREDICTED: putative uncharacterized protein DDB_G0287975 [Cucumis melo] >TYK00299.1 hypothetical protein E5676_scaffold1728G00430 [Cucumis melo var. makuwa]) HSP 1 Score: 273 bits (698), Expect = 2.89e-92 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of IVF0018700 vs. NCBI nr
Match: XP_004143632.1 (putative uncharacterized protein DDB_G0287975 isoform X1 [Cucumis sativus] >KGN50412.1 hypothetical protein Csa_000393 [Cucumis sativus]) HSP 1 Score: 267 bits (683), Expect = 5.61e-90 Identity = 132/140 (94.29%), Postives = 138/140 (98.57%), Query Frame = 0
BLAST of IVF0018700 vs. NCBI nr
Match: XP_038906846.1 (putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906847.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906848.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906849.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906850.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida]) HSP 1 Score: 262 bits (670), Expect = 5.39e-88 Identity = 131/140 (93.57%), Postives = 135/140 (96.43%), Query Frame = 0
BLAST of IVF0018700 vs. NCBI nr
Match: XP_023551664.1 (putative uncharacterized protein DDB_G0287975 [Cucurbita pepo subsp. pepo] >KAG7017126.1 hypothetical protein SDJN02_22238 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 239 bits (610), Expect = 7.59e-79 Identity = 117/140 (83.57%), Postives = 127/140 (90.71%), Query Frame = 0
BLAST of IVF0018700 vs. TAIR 10
Match: AT5G52220.1 (CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607); Has 127 Blast hits to 127 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 17; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). ) HSP 1 Score: 149.1 bits (375), Expect = 2.7e-36 Identity = 77/119 (64.71%), Postives = 90/119 (75.63%), Query Frame = 0
BLAST of IVF0018700 vs. TAIR 10
Match: AT5G52220.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607). ) HSP 1 Score: 149.1 bits (375), Expect = 2.7e-36 Identity = 77/119 (64.71%), Postives = 90/119 (75.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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