IVF0018656 (gene) Melon (IVF77) v1

Overview
NameIVF0018656
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionWound-responsive family protein
Locationchr01: 2650801 .. 2651263 (-)
RNA-Seq ExpressionIVF0018656
SyntenyIVF0018656
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAACTCAGACAAGAAAAATGTGTGCCGGAAAAAGTTGGACTACGGCGGCGGCGGCGAGTATAGGGGCGGTGGAGGCTTTGAAAGATCAAGGGCATTTATGGAGGCTGAATAATAAGTATGGTGTGAGGGCAATTTCGTCTCATCACAACAAGCTTTCTTCTTCTTCTTCTTCTTCGAATTCTTCAGCTTCTGTAATGGCGGATTCTAGTGAAGTTAAAAGGGAATTAGATCATAGTAAGCCCAAACAGTCTGAAGAATCTCTTAGAACTGTTATGTACTTGAGTTGTTGGGGTCCTTATTGATCTAGCTAATTAATAATTTTCATCCTCAATTAATTTAGAGCTAGCTTTTTAATAGTACAACAACTTTAGGCTGAAGATCCGAATCTCTAATCTTATGGTTGATAATGTATTGTCTTTATAAGAAATAATGGATTTGGATTATGCTGTGTTGAGAAAA

mRNA sequence

AAAAAAACTCAGACAAGAAAAATGTGTGCCGGAAAAAGTTGGACTACGGCGGCGGCGGCGAGTATAGGGGCGGTGGAGGCTTTGAAAGATCAAGGGCATTTATGGAGGCTGAATAATAAGTATGGTGTGAGGGCAATTTCGTCTCATCACAACAAGCTTTCTTCTTCTTCTTCTTCTTCGAATTCTTCAGCTTCTGTAATGGCGGATTCTAGTGAAGTTAAAAGGGAATTAGATCATAGTAAGCCCAAACAGTCTGAAGAATCTCTTAGAACTGTTATGTACTTGAGTTGTTGGGGTCCTTATTGATCTAGCTAATTAATAATTTTCATCCTCAATTAATTTAGAGCTAGCTTTTTAATAGTACAACAACTTTAGGCTGAAGATCCGAATCTCTAATCTTATGGTTGATAATGTATTGTCTTTATAAGAAATAATGGATTTGGATTATGCTGTGTTGAGAAAA

Coding sequence (CDS)

ATGTGTGCCGGAAAAAGTTGGACTACGGCGGCGGCGGCGAGTATAGGGGCGGTGGAGGCTTTGAAAGATCAAGGGCATTTATGGAGGCTGAATAATAAGTATGGTGTGAGGGCAATTTCGTCTCATCACAACAAGCTTTCTTCTTCTTCTTCTTCTTCGAATTCTTCAGCTTCTGTAATGGCGGATTCTAGTGAAGTTAAAAGGGAATTAGATCATAGTAAGCCCAAACAGTCTGAAGAATCTCTTAGAACTGTTATGTACTTGAGTTGTTGGGGTCCTTATTGA

Protein sequence

MCAGKSWTTAAAASIGAVEALKDQGHLWRLNNKYGVRAISSHHNKLSSSSSSSNSSASVMADSSEVKRELDHSKPKQSEESLRTVMYLSCWGPY
Homology
BLAST of IVF0018656 vs. ExPASy TrEMBL
Match: A0A5D3C541 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003710 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.8e-43
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1  MCAGKSWTTAAAASIGAVEALKDQGHLWRLNNKYGVRAISSHHNKLSSSSSSSNSSASVM 60
          MCAGKSWTTAAAASIGAVEALKDQGHLWRLNNKYGVRAISSHHNKLSSSSSSSNSSASVM
Sbjct: 1  MCAGKSWTTAAAASIGAVEALKDQGHLWRLNNKYGVRAISSHHNKLSSSSSSSNSSASVM 60

Query: 61 ADSSEVKRELDHSKPKQSEESLRTVMYLSCWGPY 95
          ADSSEVKRELDHSKPKQSEESLRTVMYLSCWGPY
Sbjct: 61 ADSSEVKRELDHSKPKQSEESLRTVMYLSCWGPY 94

BLAST of IVF0018656 vs. ExPASy TrEMBL
Match: A0A0A0K1Q6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046680 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.1e-40
Identity = 92/95 (96.84%), Postives = 94/95 (98.95%), Query Frame = 0

Query: 1  MCAGKSWTTAAAASIGAVEALKDQGHLWRLNNKYGVRAISSHHNKLSSSSSSSN-SSASV 60
          MCAGKSWTTAAAASIGAVEALKDQGHLWRLNNKYGVRAISSHHNKLSSSSSSS+ SSASV
Sbjct: 1  MCAGKSWTTAAAASIGAVEALKDQGHLWRLNNKYGVRAISSHHNKLSSSSSSSSKSSASV 60

Query: 61 MADSSEVKRELDHSKPKQSEESLRTVMYLSCWGPY 95
          +ADSSEVKRELDHSKPKQSEESLRTVMYLSCWGPY
Sbjct: 61 IADSSEVKRELDHSKPKQSEESLRTVMYLSCWGPY 95

BLAST of IVF0018656 vs. ExPASy TrEMBL
Match: A0A438DQD6 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_025535 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.9e-09
Identity = 54/94 (57.45%), Postives = 62/94 (65.96%), Query Frame = 0

Query: 4  GKSWTTAAAASIGAVEALKDQGHL-WRLNNKYGVRAISSH-HNKLSSSSSSS--NSSASV 63
          GK+W    AAS+GAVEALKDQG   W     Y +R+I  H  NKL S S +   +SS+S 
Sbjct: 5  GKAW--IVAASVGAVEALKDQGFCRW----NYAMRSIHQHARNKLRSCSQAQKLSSSSSA 64

Query: 64 MADSSEVKRELDHSKPKQSEESLRTVMYLSCWGP 94
          MA SS V+ E    K KQSEESLRTVMYLSCWGP
Sbjct: 65 MA-SSRVREE----KAKQSEESLRTVMYLSCWGP 87

BLAST of IVF0018656 vs. ExPASy TrEMBL
Match: A0A2C9US86 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G152100 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.5e-09
Identity = 54/101 (53.47%), Postives = 61/101 (60.40%), Query Frame = 0

Query: 3  AGKSWTTAAAASIGAVEALKDQGHLWRLNNKYGVRAISSH----------HNKLSSSSSS 62
          A K+W    AASIGAVEALKDQG   R NN   +R+I  H           N LSSSSSS
Sbjct: 4  ASKAW--MVAASIGAVEALKDQG-FCRWNN--AIRSIQQHAKNHFRSISLANNLSSSSSS 63

Query: 63 SNSSASVMADSSEVKRELDHSKPKQSEESLRTVMYLSCWGP 94
          S+SS+S    S     +L   + KQSEESLR VMYLSCWGP
Sbjct: 64 SSSSSSSRGSS-----KLQEDRAKQSEESLRKVMYLSCWGP 94

BLAST of IVF0018656 vs. ExPASy TrEMBL
Match: A0A4S8J4J3 (Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb11t16490 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.3e-09
Identity = 46/92 (50.00%), Postives = 56/92 (60.87%), Query Frame = 0

Query: 2  CAGKSWTTAAAASIGAVEALKDQGHLWRLNNKYGVRAISSHHNKLSSSSSSSNSSASVMA 61
          CAG++   AAAASIGAVEALKDQ  L R N  Y +R++         S S S  +AS  +
Sbjct: 3  CAGRASLAAAAASIGAVEALKDQAGLCRWN--YALRSLQQRAKSGMGSLSQSRRAASSSS 62

Query: 62 DSSEVKRELDHSKPKQSEESLRTVMYLSCWGP 94
               + +    K KQSEE+LRTVMYLSCWGP
Sbjct: 63 IDGRGRWQGGDEKAKQSEEALRTVMYLSCWGP 92

BLAST of IVF0018656 vs. NCBI nr
Match: KAA0031601.1 (hypothetical protein E6C27_scaffold139G003690 [Cucumis melo var. makuwa] >TYK07053.1 hypothetical protein E5676_scaffold13G003710 [Cucumis melo var. makuwa])

HSP 1 Score: 183 bits (465), Expect = 3.38e-58
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1  MCAGKSWTTAAAASIGAVEALKDQGHLWRLNNKYGVRAISSHHNKLSSSSSSSNSSASVM 60
          MCAGKSWTTAAAASIGAVEALKDQGHLWRLNNKYGVRAISSHHNKLSSSSSSSNSSASVM
Sbjct: 1  MCAGKSWTTAAAASIGAVEALKDQGHLWRLNNKYGVRAISSHHNKLSSSSSSSNSSASVM 60

Query: 61 ADSSEVKRELDHSKPKQSEESLRTVMYLSCWGPY 94
          ADSSEVKRELDHSKPKQSEESLRTVMYLSCWGPY
Sbjct: 61 ADSSEVKRELDHSKPKQSEESLRTVMYLSCWGPY 94

BLAST of IVF0018656 vs. NCBI nr
Match: KAE8645761.1 (hypothetical protein Csa_020242 [Cucumis sativus])

HSP 1 Score: 175 bits (444), Expect = 5.26e-53
Identity = 92/95 (96.84%), Postives = 94/95 (98.95%), Query Frame = 0

Query: 1   MCAGKSWTTAAAASIGAVEALKDQGHLWRLNNKYGVRAISSHHNKLSSSSSSSN-SSASV 60
           MCAGKSWTTAAAASIGAVEALKDQGHLWRLNNKYGVRAISSHHNKLSSSSSSS+ SSASV
Sbjct: 147 MCAGKSWTTAAAASIGAVEALKDQGHLWRLNNKYGVRAISSHHNKLSSSSSSSSKSSASV 206

Query: 61  MADSSEVKRELDHSKPKQSEESLRTVMYLSCWGPY 94
           +ADSSEVKRELDHSKPKQSEESLRTVMYLSCWGPY
Sbjct: 207 IADSSEVKRELDHSKPKQSEESLRTVMYLSCWGPY 241

BLAST of IVF0018656 vs. NCBI nr
Match: KAG6589196.1 (hypothetical protein SDJN03_17761, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 103 bits (257), Expect = 1.34e-26
Identity = 64/94 (68.09%), Postives = 70/94 (74.47%), Query Frame = 0

Query: 1  MCAGKSWTTAAAASIGAVEALKDQGHLWRLNNKYGVRAISSHHNKLSSSSSSSNSSASVM 60
          MC+GK WTTAAAASIGAVEALKDQGHL R N+   VRA+S   NKL      S+SSA  +
Sbjct: 1  MCSGKYWTTAAAASIGAVEALKDQGHLCRWNS--AVRALSQP-NKLPPPPPLSSSSA--V 60

Query: 61 ADSSEVKRELDHSKPKQSEESLRTVMYLSCWGPY 94
           D     RE DHSKPKQSEES+RTVMYLSCWGPY
Sbjct: 61 RDC----REEDHSKPKQSEESIRTVMYLSCWGPY 85

BLAST of IVF0018656 vs. NCBI nr
Match: KAG7022896.1 (hypothetical protein SDJN02_16632, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 99.4 bits (246), Expect = 3.87e-23
Identity = 63/91 (69.23%), Postives = 67/91 (73.63%), Query Frame = 0

Query: 4   GKSWTTAAAASIGAVEALKDQGHLWRLNNKYGVRAISSHHNKLSSSSSSSNSSASVMADS 63
           GK WTTAAAASIGAVEALKDQGHL R N+   VRA+S   NKL     SS+S A  + D 
Sbjct: 166 GKYWTTAAAASIGAVEALKDQGHLCRWNS--AVRALSQP-NKLPPPLPSSSSPA--VRDC 225

Query: 64  SEVKRELDHSKPKQSEESLRTVMYLSCWGPY 94
               RE DHSKPKQSEESLRTVMYLSCWGPY
Sbjct: 226 ----REEDHSKPKQSEESLRTVMYLSCWGPY 247

BLAST of IVF0018656 vs. NCBI nr
Match: XP_034702128.1 (uncharacterized protein LOC117926917 [Vitis riparia] >RVW37651.1 hypothetical protein CK203_097936 [Vitis vinifera] >RVW95231.1 hypothetical protein CK203_025535 [Vitis vinifera])

HSP 1 Score: 73.9 bits (180), Expect = 7.43e-15
Identity = 55/93 (59.14%), Postives = 63/93 (67.74%), Query Frame = 0

Query: 4  GKSWTTAAAASIGAVEALKDQGHLWRLNNKYGVRAISSH-HNKLSSSSSSS--NSSASVM 63
          GK+W    AAS+GAVEALKDQG   R N  Y +R+I  H  NKL S S +   +SS+S M
Sbjct: 5  GKAWIV--AASVGAVEALKDQGFC-RWN--YAMRSIHQHARNKLRSCSQAQKLSSSSSAM 64

Query: 64 ADSSEVKRELDHSKPKQSEESLRTVMYLSCWGP 93
          A SS V+ E    K KQSEESLRTVMYLSCWGP
Sbjct: 65 A-SSRVREE----KAKQSEESLRTVMYLSCWGP 87

BLAST of IVF0018656 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein )

HSP 1 Score: 62.8 bits (151), Expect = 1.7e-10
Identity = 47/91 (51.65%), Postives = 58/91 (63.74%), Query Frame = 0

Query: 5  KSWTTAAAASIGAVEALKDQGHLWRLNNKYGVRAISSH--HNKLSSSSSSSNSSASVMAD 64
          K+WT   A SIGAVEALKDQ  L R N  Y +R+++ H  +N  S S     SS+SV   
Sbjct: 6  KAWT--VAVSIGAVEALKDQLGLCRWN--YILRSVNQHLRNNVRSVSQGKRFSSSSV--- 65

Query: 65 SSEVKRELDHSKPKQSEESLRTVMYLSCWGP 94
          S+ V    +  K K++EESLRTVMYLSCWGP
Sbjct: 66 SAAVTSSGESEKAKKAEESLRTVMYLSCWGP 89

BLAST of IVF0018656 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein )

HSP 1 Score: 58.2 bits (139), Expect = 4.3e-09
Identity = 45/93 (48.39%), Postives = 57/93 (61.29%), Query Frame = 0

Query: 3  AGKSWTTAAAASIGAVEALKDQGHLWRLNNKYGVRAISSH-HNKLSSSSSSSNSSASVMA 62
          A K+W    AASIGAVEALKDQ  + R N  Y +R+ + +  N L S S +   S+S   
Sbjct: 4  ASKTW--MVAASIGAVEALKDQLGVCRWN--YVIRSANQYLRNNLRSVSQAKKLSSS--- 63

Query: 63 DSSEVKRELDH-SKPKQSEESLRTVMYLSCWGP 94
                  +D+ +K KQ+EESLRTVMYLSCWGP
Sbjct: 64 -------SIDYTNKTKQAEESLRTVMYLSCWGP 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C5417.8e-43100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K1Q62.1e-4096.84Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046680 PE=4 SV=1[more]
A0A438DQD61.9e-0957.45Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_025535 PE=4 SV=1[more]
A0A2C9US862.5e-0953.47Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G152100 PE=4 SV=... [more]
A0A4S8J4J34.3e-0950.00Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb11t16490 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
KAA0031601.13.38e-58100.00hypothetical protein E6C27_scaffold139G003690 [Cucumis melo var. makuwa] >TYK070... [more]
KAE8645761.15.26e-5396.84hypothetical protein Csa_020242 [Cucumis sativus][more]
KAG6589196.11.34e-2668.09hypothetical protein SDJN03_17761, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7022896.13.87e-2369.23hypothetical protein SDJN02_16632, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_034702128.17.43e-1559.14uncharacterized protein LOC117926917 [Vitis riparia] >RVW37651.1 hypothetical pr... [more]
Match NameE-valueIdentityDescription
AT4G10270.11.7e-1051.65Wound-responsive family protein [more]
AT4G10265.14.3e-0948.39Wound-responsive family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022251Protein of unknown function wound-inducedPFAMPF12609DUF3774coord: 12..93
e-value: 4.7E-22
score: 78.8
IPR022251Protein of unknown function wound-inducedPANTHERPTHR33090DUF3774 DOMAIN PROTEIN-RELATEDcoord: 1..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..78

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0018656.2IVF0018656.2mRNA