IVF0018653 (gene) Melon (IVF77) v1

Overview
NameIVF0018653
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr02: 21974952 .. 21975291 (+)
RNA-Seq ExpressionIVF0018653
SyntenyIVF0018653
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGAGAAGGCGGAGGGCATGAAGACGTGTGAAGGTTATTCAAAAGTAGGGCCCATTTTGGCTGACGTCAGCCTTTATTTATTTTCCTCGACGCGGTTTGAAGGGCCATTTCGCCACCCACACGCTCTCGCTTTCTCTGACTGACACACCAATCTACTCTCCTTTCCCTCTTTGCTTTTCGCCTCAACGGAAATTTCTCCAACGATTCTCTTCTTCTTCACTTCTGGCTTACACTCTTCTTCTTCTTCTTCACGGCTGGACTCGGCCACAGCTCCAGCTTCTTCTTTTTCAGACCGACCCAGAGAGCTTTGAGGCAAAAAATGACGACTATGATTGA

mRNA sequence

ATGGGGGAGAAGGCGGAGGGCATGAAGACGTGTGAAGGTTATTCAAAAGTAGGGCCCATTTTGGCTGACGGCCATTTCGCCACCCACACGCTCTCGCTTTCTCTGACTGACACACCAATCTACTCTCCTTTCCCTCTTTGCTTTTCGCCTCAACGGAAATTTCTCCAACGATTCTCTTCTTCTTCACTTCTGGCTTACACTCTTCTTCTTCTTCTTCACGGCTGGACTCGGCCACAGCTCCAGCTTCTTCTTTTTCAGACCGACCCAGAGAGCTTTGAGGCAAAAAATGACGACTATGATTGA

Coding sequence (CDS)

ATGGGGGAGAAGGCGGAGGGCATGAAGACGTGTGAAGGTTATTCAAAAGTAGGGCCCATTTTGGCTGACGGCCATTTCGCCACCCACACGCTCTCGCTTTCTCTGACTGACACACCAATCTACTCTCCTTTCCCTCTTTGCTTTTCGCCTCAACGGAAATTTCTCCAACGATTCTCTTCTTCTTCACTTCTGGCTTACACTCTTCTTCTTCTTCTTCACGGCTGGACTCGGCCACAGCTCCAGCTTCTTCTTTTTCAGACCGACCCAGAGAGCTTTGAGGCAAAAAATGACGACTATGATTGA

Protein sequence

MGEKAEGMKTCEGYSKVGPILADGHFATHTLSLSLTDTPIYSPFPLCFSPQRKFLQRFSSSSLLAYTLLLLLHGWTRPQLQLLLFQTDPESFEAKNDDYD
Homology
[Close]
BLAST of IVF0018653 vs. ExPASy TrEMBL
Match: A0A0A0LRI7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005700 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.0e-36
Identity = 85/103 (82.52%), Postives = 89/103 (86.41%), Query Frame = 0 

Query: 1   MGEKAEGMKTCEGYSKVGPILADGHFATHTLSLSLTDTPIYSPFPL-CFSPQRKFLQRF- 60
           MG++AEGMKTCEGYSKVGP+LADGHFATHTLS SLTDTPIYS F L  F     FLQRF 
Sbjct: 1   MGKRAEGMKTCEGYSKVGPVLADGHFATHTLSHSLTDTPIYSSFSLFAFRLNGNFLQRFS 60

Query: 61  -SSSSLLAYTLLLLLHGWTRPQLQLLLFQTDPESFEAKNDDYD 101
            SSSSLLAYT  LLLHGWTRPQLQ+LLFQTDPESFEAKNDDYD
Sbjct: 61  SSSSSLLAYT--LLLHGWTRPQLQILLFQTDPESFEAKNDDYD 101

The following BLAST results are available for this feature:
BLAST of IVF0018653 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0018653 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRI72.0e-3682.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005700 PE=4 SV=1[more]
BLAST of IVF0018653 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of IVF0018653 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0018653.1IVF0018653.1mRNA