Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTTACTTCACAGAACGATTCTTGTTTGGAGTCCGACACCTTGTAGTATTTTATGATAGAAATCAACTAAGAGAAGATGGACTTAGTCTCCTTGTGGAGAAGCCATGGACTGGCTCTTTTGCAGATCATTGGCCACGCTTAGACAACAGCTCAATTCTTCCCAGATTGTCTGTGGAGATACCTTTATTTGAGGGAAAAACTGCATGGGTCCTACAGTCTTCTATCCATAACGAGGATCCTAATTCTGACAGAGTTCTCACTCTCGGACAACATTTAATTGAAGGCCAAACACGTTGGGGCACTATGACCAAGGTCCCTAGAGAGTTCTGCTTTACTGATTGCTATTGGGAGTGGCTAGAGCTTGTAGTTGGTCGAAATGCGCGACTTCTTTATAGTGCTTGTTTATATGATGTCGTAACAACTTATTTCTACACTTATGATCGTAATAGTGATTAG
mRNA sequence
ATGATTTACTTCACAGAACGATTCTTGTTTGGAGTCCGACACCTTGTAGTATTTTATGATAGAAATCAACTAAGAGAAGATGGACTTAGTCTCCTTGTGGAGAAGCCATGGACTGGCTCTTTTGCAGATCATTGGCCACGCTTAGACAACAGCTCAATTCTTCCCAGATTGTCTGTGGAGATACCTTTATTTGAGGGAAAAACTGCATGGGTCCTACAGTCTTCTATCCATAACGAGGATCCTAATTCTGACAGAGTTCTCACTCTCGGACAACATTTAATTGAAGGCCAAACACGTTGGGGCACTATGACCAAGGTCCCTAGAGAGTTCTGCTTTACTGATTGCTATTGGGAGTGGCTAGAGCTTGTAGTTGGTCGAAATGCGCGACTTCTTTATAGTGCTTGTTTATATGATGTCGTAACAACTTATTTCTACACTTATGATCGTAATAGTGATTAG
Coding sequence (CDS)
ATGATTTACTTCACAGAACGATTCTTGTTTGGAGTCCGACACCTTGTAGTATTTTATGATAGAAATCAACTAAGAGAAGATGGACTTAGTCTCCTTGTGGAGAAGCCATGGACTGGCTCTTTTGCAGATCATTGGCCACGCTTAGACAACAGCTCAATTCTTCCCAGATTGTCTGTGGAGATACCTTTATTTGAGGGAAAAACTGCATGGGTCCTACAGTCTTCTATCCATAACGAGGATCCTAATTCTGACAGAGTTCTCACTCTCGGACAACATTTAATTGAAGGCCAAACACGTTGGGGCACTATGACCAAGGTCCCTAGAGAGTTCTGCTTTACTGATTGCTATTGGGAGTGGCTAGAGCTTGTAGTTGGTCGAAATGCGCGACTTCTTTATAGTGCTTGTTTATATGATGTCGTAACAACTTATTTCTACACTTATGATCGTAATAGTGATTAG
Protein sequence
MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
Homology
BLAST of IVF0018643 vs. ExPASy TrEMBL
Match:
A0A5D3DTH1 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold95G00330 PE=4 SV=1)
HSP 1 Score: 329.3 bits (843), Expect = 8.3e-87
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
Query: 1 MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE 60
MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE
Sbjct: 28 MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE 87
Query: 61 IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL 120
IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL
Sbjct: 88 IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL 147
Query: 121 ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 153
ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
Sbjct: 148 ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 179
BLAST of IVF0018643 vs. ExPASy TrEMBL
Match:
A0A1S3B4Q9 (uncharacterized protein LOC103486002 OS=Cucumis melo OX=3656 GN=LOC103486002 PE=4 SV=1)
HSP 1 Score: 329.3 bits (843), Expect = 8.3e-87
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
Query: 1 MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE 60
MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE
Sbjct: 8 MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE 67
Query: 61 IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL 120
IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL
Sbjct: 68 IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL 127
Query: 121 ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 153
ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
Sbjct: 128 ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 159
BLAST of IVF0018643 vs. ExPASy TrEMBL
Match:
A0A5A7U8L3 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001600 PE=4 SV=1)
HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70
Identity = 125/152 (82.24%), Postives = 134/152 (88.16%), Query Frame = 0
Query: 1 MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE 60
M+YFTERFL GVRHLV+ DRNQ REDGLSL++EKPW G+FADHWPRLDN+S+LPRLSVE
Sbjct: 1 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIMEKPWAGAFADHWPRLDNNSVLPRLSVE 60
Query: 61 IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL 120
IPL EGK+AW+LQSSIHNE PNS R LTLGQ LIEGQTRWGTMTKVP EFCFTDCYWEWL
Sbjct: 61 IPLSEGKSAWILQSSIHNEAPNSGRALTLGQRLIEGQTRWGTMTKVPGEFCFTDCYWEWL 120
Query: 121 ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 153
ELVVGRN RLLYS LY VTT YTYDRNSD
Sbjct: 121 ELVVGRNTRLLYSTRLYGTVTTSLYTYDRNSD 152
BLAST of IVF0018643 vs. ExPASy TrEMBL
Match:
A0A5A7VHW8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00370 PE=4 SV=1)
HSP 1 Score: 273.1 bits (697), Expect = 7.1e-70
Identity = 124/152 (81.58%), Postives = 134/152 (88.16%), Query Frame = 0
Query: 1 MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE 60
M+YFTERFL GVRHLV+ DRNQ REDGLSL+VEKPW G+FADHWPRLDN+S+LPRLSVE
Sbjct: 1 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60
Query: 61 IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL 120
IPL EGK+AW+LQSSIH+E PNS R LTLGQ LIEGQTRWGT+TKVPREFCFTDCYWEWL
Sbjct: 61 IPLSEGKSAWILQSSIHHEAPNSGRALTLGQRLIEGQTRWGTVTKVPREFCFTDCYWEWL 120
Query: 121 ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 153
ELVVGRN RLLYS LY VT YTYDRNSD
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDRNSD 152
BLAST of IVF0018643 vs. ExPASy TrEMBL
Match:
A0A5A7TX42 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00950 PE=4 SV=1)
HSP 1 Score: 272.3 bits (695), Expect = 1.2e-69
Identity = 124/152 (81.58%), Postives = 133/152 (87.50%), Query Frame = 0
Query: 1 MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE 60
M+YFTERFL GVRHLV+ DRNQ REDGLSL+VEKPW G+FADHWPRLDN+S+LPRLSVE
Sbjct: 1 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60
Query: 61 IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL 120
+PL EGK+AWVLQSSIHNE PNS R LTLGQ LIEGQTRWGT+TKVP EFCFTDCYWEWL
Sbjct: 61 VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWL 120
Query: 121 ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 153
ELVVGRN RLLYS LY VT YTYDRNSD
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDRNSD 152
BLAST of IVF0018643 vs. NCBI nr
Match:
XP_008442010.1 (PREDICTED: uncharacterized protein LOC103486002 [Cucumis melo])
HSP 1 Score: 327 bits (837), Expect = 5.71e-113
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
Query: 1 MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE 60
MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE
Sbjct: 8 MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE 67
Query: 61 IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL 120
IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL
Sbjct: 68 IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL 127
Query: 121 ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 152
ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
Sbjct: 128 ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 159
BLAST of IVF0018643 vs. NCBI nr
Match:
KAA0041757.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK27047.1 putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 327 bits (837), Expect = 1.15e-112
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
Query: 1 MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE 60
MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE
Sbjct: 28 MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE 87
Query: 61 IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL 120
IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL
Sbjct: 88 IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL 147
Query: 121 ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 152
ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
Sbjct: 148 ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 179
BLAST of IVF0018643 vs. NCBI nr
Match:
KAA0053734.1 (putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 267 bits (683), Expect = 8.24e-86
Identity = 123/152 (80.92%), Postives = 133/152 (87.50%), Query Frame = 0
Query: 1 MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE 60
M+YFTERFL GVRHLV+ DRNQ REDGLSL+VEKPW G+FADHWPRLDN+S+LPRLSVE
Sbjct: 1 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60
Query: 61 IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL 120
IPL EGK+AW+LQSSIHNE PNS R LTLGQ LIEGQTRWGT+TKVP EFCFTDCYWEWL
Sbjct: 61 IPLSEGKSAWILQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWL 120
Query: 121 ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 152
ELVVGRN RLLYS LY VT Y+YDRNSD
Sbjct: 121 ELVVGRNTRLLYSTRLYGPVTASLYSYDRNSD 152
BLAST of IVF0018643 vs. NCBI nr
Match:
KAA0061098.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK03768.1 putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 258 bits (660), Expect = 5.00e-85
Identity = 119/152 (78.29%), Postives = 129/152 (84.87%), Query Frame = 0
Query: 1 MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE 60
M+YFTERFL GVRHLV+ DRNQ REDGLSL+VEKPW G+FADHWPRLDN+S+L RLSVE
Sbjct: 1 MVYFTERFLSGVRHLVILSDRNQSREDGLSLIVEKPWAGTFADHWPRLDNNSVLSRLSVE 60
Query: 61 IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL 120
IPL EGK+AWVLQS IH+E PNS R LT GQ LIEGQT WGT+TKVP EFCFTDCYWEWL
Sbjct: 61 IPLSEGKSAWVLQSFIHDEAPNSGRALTFGQRLIEGQTHWGTVTKVPGEFCFTDCYWEWL 120
Query: 121 ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 152
ELVVGRN RLLYS LY VT YTYDRN+D
Sbjct: 121 ELVVGRNTRLLYSTHLYGAVTASLYTYDRNND 152
BLAST of IVF0018643 vs. NCBI nr
Match:
KAA0058006.1 (uncharacterized protein E6C27_scaffold274G003110 [Cucumis melo var. makuwa])
HSP 1 Score: 265 bits (677), Expect = 1.83e-84
Identity = 122/152 (80.26%), Postives = 132/152 (86.84%), Query Frame = 0
Query: 1 MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE 60
M+YFTERFL GVRHL++ Y++NQ REDGLSL+VEKPW +FADHWPRLDN+S+LPRLSVE
Sbjct: 22 MVYFTERFLSGVRHLIILYNKNQPREDGLSLIVEKPWAAAFADHWPRLDNNSVLPRLSVE 81
Query: 61 IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL 120
IPL EGK+AWVLQSSIHNE PNS R LTLGQ LIEGQTRWGTMTKVP EF FTDCYWEWL
Sbjct: 82 IPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTMTKVPGEFYFTDCYWEWL 141
Query: 121 ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 152
ELVVGRN RLLYS LY VT YTYDRNSD
Sbjct: 142 ELVVGRNTRLLYSTRLYGTVTASLYTYDRNSD 173
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DTH1 | 8.3e-87 | 100.00 | Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
| A0A1S3B4Q9 | 8.3e-87 | 100.00 | uncharacterized protein LOC103486002 OS=Cucumis melo OX=3656 GN=LOC103486002 PE=... | [more] |
| A0A5A7U8L3 | 2.4e-70 | 82.24 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
| A0A5A7VHW8 | 7.1e-70 | 81.58 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
| A0A5A7TX42 | 1.2e-69 | 81.58 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_008442010.1 | 5.71e-113 | 100.00 | PREDICTED: uncharacterized protein LOC103486002 [Cucumis melo] | [more] |
| KAA0041757.1 | 1.15e-112 | 100.00 | putative mitochondrial protein [Cucumis melo var. makuwa] >TYK27047.1 putative m... | [more] |
| KAA0053734.1 | 8.24e-86 | 80.92 | putative mitochondrial protein [Cucumis melo var. makuwa] | [more] |
| KAA0061098.1 | 5.00e-85 | 78.29 | putative mitochondrial protein [Cucumis melo var. makuwa] >TYK03768.1 putative m... | [more] |
| KAA0058006.1 | 1.83e-84 | 80.26 | uncharacterized protein E6C27_scaffold274G003110 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
