IVF0018555 (gene) Melon (IVF77) v1

Overview


Name	IVF0018555
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	DPH4 homolog
Location	chr03: 25967608 .. 25968754 (-)
RNA-Seq Expression	IVF0018555
Synteny	IVF0018555

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCAAGCAGTGGCGCCATTGGTGAAACTTACTATGATGTACTGTCTTTAAGAGAAGATGCTAGCTTTGACGAAATTCGAGCCAGCTATCGGTCGGCTCTCCTTAATTTCCACCCTGATAAATTACAAGCCATGTGCCGTAAATCTCATCCAGACGACATCAAGGGAGAAAGATACTTCAAGGTGCAGAAGGCTTGGGAAGTTCTCGGCAGCCCGAAGTCCCGTGCATCTTATGACAGAGAGCTCCAAGCAGCCAAAGGGGATGCAATTGGTGCAGAGAGCATAAGCTTAGAGGATATGGTTGTGGAAGATAAAGGTGAAGTTGTAGAACTTTTTATCAGTGCCGTTGTGGGGATTGCTTCTTTATTGACTCGGGGGAGTTGGATGAAATGGGATATCCATTGTTGAGGAATGGGAGTAAGGTTTCCTTAAGGACTCTGGATGCTTTGCCTGCTTCTGTTGTTTTACCCTGTGGTTCTTGCTCTTTGAAGGTTCGTTTGGTAATTGATACGAATTCAAGTGTATCGATTGACTGTTGAATTTGAATGATCGAAATCACAATGATTTTTCTTAATATCCTTGCCATTTATTGTTTAAATTGAGAGAGTTTATGAGTGTGTTGTGCTCTTCGGTAGAGTTTACGTGGGTTTTCTAACAATTTTCCTAGGCTGTTTGGTTCAATTTTGTACATGTGGACTGTGGGGGGTACTATCGGCATCAGAAAAACATCAGCTTGAAGATTTCGTCGACTTAATTGTCAAAATTTGAGTGAAGTATAACCGGATTGTACACCAAGAGATGGGGGAAAATCCATAGTAGTTTCCTTCTCTAAACTGACTGCTGAGTAAGATACATTGTTATTTCCTTTTCTGGACATCTCCCTCGCAGGCTCTCTCGTAAGACCAAAGACGTCCAAAACGAAGTATAACTGGAGGGGAAATGATAAACAAGTCTAGCTGGACTCAAAGGGGAATAGCGACTGAACTATTTTAGAATAGGTTTAGTTCATTTTTGAGGTAACGTATTTACTAAACGATCAATTTGTCAACGACAACCTTTCTAGAAAACTTGTGGCAAACTGACTAAGGAAATTCCCAAACTGGTGATTTACTCCCTTGGATTGCTGCCTTTTGTTGTAAAGGGG

mRNA sequence

ATGAGTTCAAGCAGTGGCGCCATTGGTGAAACTTACTATGATGTACTGTCTTTAAGAGAAGATGCTAGCTTTGACGAAATTCGAGCCAGCTATCGGTCGGCTCTCCTTAATTTCCACCCTGATAAATTACAAGCCATGTGCCGTAAATCTCATCCAGACGACATCAAGGGAGAAAGATACTTCAAGGTGCAGAAGGCTTGGGAAGTTCTCGGCAGCCCGAAGTCCCGTGCATCTTATGACAGAGAGCTCCAAGCAGCCAAAGGGGATGCAATTGGTGCAGAGAGCATAAGCTTAGAGGATATGGTTTGCCGTTGTGGGGATTGCTTCTTTATTGACTCGGGGGAGTTGGATGAAATGGGATATCCATTGTTGAGGAATGGGAGTAAGGTTTCCTTAAGGACTCTGGATGCTTTGCCTGCTTCTGTTGTTTTACCCTGTGGTTCTTGCTCTTTGAAGGTTCGTTTGGTAATTGATACGAATTCAAGTGTATCGATTGACTGTTGAATTTGAATGATCGAAATCACAATGATTTTTCTTAATATCCTTGCCATTTATTGTTTAAATTGAGAGAGTTTATGAGTGTGTTGTGCTCTTCGGTAGAGTTTACGTGGGTTTTCTAACAATTTTCCTAGGCTGTTTGGTTCAATTTTGTACATGTGGACTGTGGGGGGTACTATCGGCATCAGAAAAACATCAGCTTGAAGATTTCGTCGACTTAATTGTCAAAATTTGAGTGAAGTATAACCGGATTGTACACCAAGAGATGGGGGAAAATCCATAGTAGTTTCCTTCTCTAAACTGACTGCTGAGTAAGATACATTGTTATTTCCTTTTCTGGACATCTCCCTCGCAGGCTCTCTCGTAAGACCAAAGACGTCCAAAACGAAGTATAACTGGAGGGGAAATGATAAACAAGTCTAGCTGGACTCAAAGGGGAATAGCGACTGAACTATTTTAGAATAGGTTTAGTTCATTTTTGAGGTAACGTATTTACTAAACGATCAATTTGTCAACGACAACCTTTCTAGAAAACTTGTGGCAAACTGACTAAGGAAATTCCCAAACTGGTGATTTACTCCCTTGGATTGCTGCCTTTTGTTGTAAAGGGG

Coding sequence (CDS)

ATGAGTTCAAGCAGTGGCGCCATTGGTGAAACTTACTATGATGTACTGTCTTTAAGAGAAGATGCTAGCTTTGACGAAATTCGAGCCAGCTATCGGTCGGCTCTCCTTAATTTCCACCCTGATAAATTACAAGCCATGTGCCGTAAATCTCATCCAGACGACATCAAGGGAGAAAGATACTTCAAGGTGCAGAAGGCTTGGGAAGTTCTCGGCAGCCCGAAGTCCCGTGCATCTTATGACAGAGAGCTCCAAGCAGCCAAAGGGGATGCAATTGGTGCAGAGAGCATAAGCTTAGAGGATATGGTTTGCCGTTGTGGGGATTGCTTCTTTATTGACTCGGGGGAGTTGGATGAAATGGGATATCCATTGTTGAGGAATGGGAGTAAGGTTTCCTTAAGGACTCTGGATGCTTTGCCTGCTTCTGTTGTTTTACCCTGTGGTTCTTGCTCTTTGAAGGTTCGTTTGGTAATTGATACGAATTCAAGTGTATCGATTGACTGTTGA

Protein sequence

MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERYFKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDMVCRCGDCFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLKVRLVIDTNSSVSIDC

Homology

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BLAST of IVF0018555 vs. ExPASy Swiss-Prot
Match: Q9XCA6 (Chaperone protein DnaJ OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) OX=242619 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-10
Identity = 45/132 (34.09%), Postives = 71/132 (53.79%), Query Frame = 0


Query: 12  YYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERYFK-VQKAWEVL 71
           YY+VL + ++A+ DE++ +YR   + +HPDK        +P D + E +FK V +A++VL
Sbjct: 7   YYEVLGVSKNATDDELKKAYRKKAIQYHPDK--------NPGDKEAEEHFKEVAEAYDVL 66

Query: 72  GSPKSRASYDRELQAAKGDAIG----AESISLEDMVCRCGDCF--FIDSGELDEMG---Y 131
             P+ R+ YD+   A  G A G       +S+ED+  R GD F  F   G   +MG    
Sbjct: 67  SDPQKRSQYDQFGHAGLGGAAGGGFSGGGMSMEDIFSRFGDLFGGFGGFGGFSDMGGGSR 126

Query: 132 PLLRNGSKVSLR 134
             +R GS + +R
Sbjct: 127 RRVRRGSDLRVR 130

[Close]

BLAST of IVF0018555 vs. ExPASy Swiss-Prot
Match: B2RLJ0 (Chaperone protein DnaJ OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / CIP 103683 / JCM 12257 / NCTC 11834 / 2561) OX=431947 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.8e-10
Identity = 45/132 (34.09%), Postives = 71/132 (53.79%), Query Frame = 0


Query: 12  YYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERYFK-VQKAWEVL 71
           YY+VL + ++A+ DE++ +YR   + +HPDK        +P D + E +FK V +A++VL
Sbjct: 7   YYEVLGVSKNATDDELKKAYRKKAIQYHPDK--------NPGDKEAEEHFKEVAEAYDVL 66

Query: 72  GSPKSRASYDRELQAAKGDAIG----AESISLEDMVCRCGDCF--FIDSGELDEMG---Y 131
             P+ R+ YD+   A  G A G       +S+ED+  R GD F  F   G   +MG    
Sbjct: 67  SDPEKRSRYDQFGHAGLGGAAGGGFSGGGMSMEDIFSRFGDLFGGFGGFGGFSDMGGSSR 126

Query: 132 PLLRNGSKVSLR 134
             +R GS + +R
Sbjct: 127 RRVRRGSDLRVR 130

[Close]

BLAST of IVF0018555 vs. ExPASy Swiss-Prot
Match: P47138 (Diphthamide biosynthesis protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=JJJ3 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.6e-09
Identity = 47/168 (27.98%), Postives = 78/168 (46.43%), Query Frame = 0


Query: 11  TYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERYFKVQKAWEVL 70
           T+Y++L +  DA+ DEI+ +YR+ LLN HPDKL     KS  D +      K+Q A+++L
Sbjct: 8   THYEILRIPSDATQDEIKKAYRNRLLNTHPDKLS----KSIHDTVSNVTINKIQDAYKIL 67

Query: 71  GSPKSRASYDR------ELQAAKGDAIGAESISLED---------MVCRCGDCFFIDSGE 130
            + K+R  YDR      + Q       G +  SL+D          +  C  C F+    
Sbjct: 68  SNIKTRREYDRLILENYKRQGFHNCGDGLDEFSLDDFSFDEDKLEFMMNCPRCQFVG--- 127

Query: 131 LDEMGYPLLRNGSKVSLRTLDALPAS-----VVLPCGSCSLKVRLVID 159
               G+    +     +  +DA+  S     ++  C +CSL +++  D
Sbjct: 128 ----GFHFSESLLDECIDNVDAMERSHSGYQLLTQCSACSLWLKVNFD 164

[Close]

BLAST of IVF0018555 vs. ExPASy Swiss-Prot
Match: B9KH92 (Chaperone protein DnaJ OS=Anaplasma marginale (strain Florida) OX=320483 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.4e-09
Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = 0


Query: 9  GETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERYF-KVQKAW 68
          G  YY++L +  +AS +EI+ SYR  +  +HPDK        +P D K E  F K+ +A+
Sbjct: 3  GNDYYEILEVSRNASAEEIKKSYRKMVFKYHPDK--------NPGDKKAEEKFKKISEAY 62

Query: 69 EVLGSPKSRASYDR 82
          EVL +P+ RA+YDR
Sbjct: 63 EVLSNPEKRAAYDR 68

[Close]

BLAST of IVF0018555 vs. ExPASy Swiss-Prot
Match: Q5P9E0 (Chaperone protein DnaJ OS=Anaplasma marginale (strain St. Maries) OX=234826 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.4e-09
Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = 0


Query: 9  GETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERYF-KVQKAW 68
          G  YY++L +  +AS +EI+ SYR  +  +HPDK        +P D K E  F K+ +A+
Sbjct: 3  GNDYYEILEVSRNASAEEIKKSYRKMVFKYHPDK--------NPGDKKAEEKFKKISEAY 62

Query: 69 EVLGSPKSRASYDR 82
          EVL +P+ RA+YDR
Sbjct: 63 EVLSNPEKRAAYDR 68

[Close]

BLAST of IVF0018555 vs. ExPASy TrEMBL
Match: A0A1S3BBM0 (DPH4 homolog OS=Cucumis melo OX=3656 GN=LOC103487907 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.0e-85
Identity = 166/180 (92.22%), Postives = 166/180 (92.22%), Query Frame = 0


Query: 1   MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY 60
           MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY
Sbjct: 1   MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY 60

Query: 61  FKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDMV-------------CRCGD 120
           FKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDMV             CRCGD
Sbjct: 61  FKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDMVVEDKGEVVELFYQCRCGD 120

Query: 121 CFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLKVRLVIDTNSSVSIDC 168
           CFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLKV LVIDTNSSVSIDC
Sbjct: 121 CFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLKVLLVIDTNSSVSIDC 180

[Close]

BLAST of IVF0018555 vs. ExPASy TrEMBL
Match: A0A5A7V202 (DPH4-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00090 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.3e-77
Identity = 152/165 (92.12%), Postives = 152/165 (92.12%), Query Frame = 0


Query: 1   MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY 60
           MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY
Sbjct: 42  MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY 101

Query: 61  FKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDMV-------------CRCGD 120
           FKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDMV             CRCGD
Sbjct: 102 FKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDMVVEDKGEVVELFYQCRCGD 161

Query: 121 CFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLK 153
           CFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLK
Sbjct: 162 CFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLK 206

[Close]

BLAST of IVF0018555 vs. ExPASy TrEMBL
Match: A0A0A0LKX8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360030 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.2e-75
Identity = 150/173 (86.71%), Postives = 155/173 (89.60%), Query Frame = 0


Query: 1   MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY 60
           M+S SG+IGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMC KSHPDDI GERY
Sbjct: 1   MNSISGSIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCHKSHPDDIMGERY 60

Query: 61  FKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDMV-------------CRCGD 120
           FKVQKAWEVLGS KSRASYDRELQAAKGDAIGAESISLEDMV             CRCGD
Sbjct: 61  FKVQKAWEVLGSSKSRASYDRELQAAKGDAIGAESISLEDMVVEDKGEVVELLYQCRCGD 120

Query: 121 CFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLKVRLVIDTN 161
            FFIDSGELDEMGYPLLRNGSKVSLRTL+ALPASVVLPCGSCSLKVRL+ID+N
Sbjct: 121 YFFIDSGELDEMGYPLLRNGSKVSLRTLNALPASVVLPCGSCSLKVRLLIDSN 173

[Close]

BLAST of IVF0018555 vs. ExPASy TrEMBL
Match: A0A6J1KK19 (DPH4 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495973 PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 6.8e-74
Identity = 145/180 (80.56%), Postives = 158/180 (87.78%), Query Frame = 0


Query: 1   MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY 60
           MSSSSG+IGETYYDVLSLREDAS DEIRASYRSALLNFHPDKLQAMC+KSHP+D+ GERY
Sbjct: 1   MSSSSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPNDVVGERY 60

Query: 61  FKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDMV-------------CRCGD 120
           FKVQKAWEVLGS  SRA+YDRELQAAKG+A+GAESI LEDM              CRCGD
Sbjct: 61  FKVQKAWEVLGSSMSRAAYDRELQAAKGEAMGAESIGLEDMAVEDKGEVVELLYQCRCGD 120

Query: 121 CFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLKVRLVIDTNSSVSIDC 168
            FFIDSGEL+EMGYP+LR GSKVSLRTLDALPAS+VLPCGSCSLKVRL+ID++S VSIDC
Sbjct: 121 YFFIDSGELEEMGYPMLRIGSKVSLRTLDALPASIVLPCGSCSLKVRLLIDSDSCVSIDC 180

[Close]

BLAST of IVF0018555 vs. ExPASy TrEMBL
Match: A0A6J1KMK1 (DPH4 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495973 PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 6.8e-74
Identity = 145/180 (80.56%), Postives = 158/180 (87.78%), Query Frame = 0


Query: 1   MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY 60
           MSSSSG+IGETYYDVLSLREDAS DEIRASYRSALLNFHPDKLQAMC+KSHP+D+ GERY
Sbjct: 40  MSSSSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPNDVVGERY 99

Query: 61  FKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDMV-------------CRCGD 120
           FKVQKAWEVLGS  SRA+YDRELQAAKG+A+GAESI LEDM              CRCGD
Sbjct: 100 FKVQKAWEVLGSSMSRAAYDRELQAAKGEAMGAESIGLEDMAVEDKGEVVELLYQCRCGD 159

Query: 121 CFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLKVRLVIDTNSSVSIDC 168
            FFIDSGEL+EMGYP+LR GSKVSLRTLDALPAS+VLPCGSCSLKVRL+ID++S VSIDC
Sbjct: 160 YFFIDSGELEEMGYPMLRIGSKVSLRTLDALPASIVLPCGSCSLKVRLLIDSDSCVSIDC 219

[Close]

BLAST of IVF0018555 vs. NCBI nr
Match: XP_008444636.1 (PREDICTED: DPH4 homolog [Cucumis melo])

HSP 1 Score: 324 bits (830), Expect = 2.57e-111
Identity = 166/180 (92.22%), Postives = 166/180 (92.22%), Query Frame = 0


Query: 1   MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY 60
           MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY
Sbjct: 1   MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY 60

Query: 61  FKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDMV-------------CRCGD 120
           FKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDMV             CRCGD
Sbjct: 61  FKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDMVVEDKGEVVELFYQCRCGD 120

Query: 121 CFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLKVRLVIDTNSSVSIDC 167
           CFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLKV LVIDTNSSVSIDC
Sbjct: 121 CFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLKVLLVIDTNSSVSIDC 180

[Close]

BLAST of IVF0018555 vs. NCBI nr
Match: XP_038884890.1 (DPH4 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 300 bits (767), Expect = 9.99e-102
Identity = 155/179 (86.59%), Postives = 160/179 (89.39%), Query Frame = 0


Query: 1   MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY 60
           MSSSSG+IGETYYDVLSL+EDAS+DEIRASYRSALLNFHPDKLQAMC KSHPDDI  ERY
Sbjct: 1   MSSSSGSIGETYYDVLSLKEDASYDEIRASYRSALLNFHPDKLQAMCHKSHPDDIALERY 60

Query: 61  FKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDMV-------------CRCGD 120
           FKVQKAWEVLGS  SRASYDRELQAAKGDAIGAESISLEDMV             CRCGD
Sbjct: 61  FKVQKAWEVLGSSMSRASYDRELQAAKGDAIGAESISLEDMVVEDKGEVVELFYQCRCGD 120

Query: 121 CFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLKVRLVIDTNSSVSID 166
            FFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLKVRL+ID+NSSVSID
Sbjct: 121 YFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLKVRLLIDSNSSVSID 179

[Close]

BLAST of IVF0018555 vs. NCBI nr
Match: KAA0060877.1 (DPH4-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 298 bits (764), Expect = 1.18e-99
Identity = 152/165 (92.12%), Postives = 152/165 (92.12%), Query Frame = 0


Query: 1   MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY 60
           MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY
Sbjct: 42  MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY 101

Query: 61  FKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDMV-------------CRCGD 120
           FKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDMV             CRCGD
Sbjct: 102 FKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDMVVEDKGEVVELFYQCRCGD 161

Query: 121 CFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLK 152
           CFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLK
Sbjct: 162 CFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLK 206

[Close]

BLAST of IVF0018555 vs. NCBI nr
Match: XP_004152732.1 (DPH4 homolog [Cucumis sativus] >KGN62535.1 hypothetical protein Csa_022638 [Cucumis sativus])

HSP 1 Score: 293 bits (749), Expect = 4.50e-99
Identity = 150/173 (86.71%), Postives = 155/173 (89.60%), Query Frame = 0


Query: 1   MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY 60
           M+S SG+IGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMC KSHPDDI GERY
Sbjct: 1   MNSISGSIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCHKSHPDDIMGERY 60

Query: 61  FKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDMV-------------CRCGD 120
           FKVQKAWEVLGS KSRASYDRELQAAKGDAIGAESISLEDMV             CRCGD
Sbjct: 61  FKVQKAWEVLGSSKSRASYDRELQAAKGDAIGAESISLEDMVVEDKGEVVELLYQCRCGD 120

Query: 121 CFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLKVRLVIDTN 160
            FFIDSGELDEMGYPLLRNGSKVSLRTL+ALPASVVLPCGSCSLKVRL+ID+N
Sbjct: 121 YFFIDSGELDEMGYPLLRNGSKVSLRTLNALPASVVLPCGSCSLKVRLLIDSN 173

[Close]

BLAST of IVF0018555 vs. NCBI nr
Match: XP_023523039.1 (DPH4 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287 bits (735), Expect = 7.79e-97
Identity = 145/180 (80.56%), Postives = 156/180 (86.67%), Query Frame = 0


Query: 1   MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY 60
           MSSSSG+IGETYYDVLSLREDAS DEIRASYRSALLNFHPDKLQAMC+KSHPDD+ GERY
Sbjct: 1   MSSSSGSIGETYYDVLSLREDASHDEIRASYRSALLNFHPDKLQAMCQKSHPDDVVGERY 60

Query: 61  FKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDMV-------------CRCGD 120
           FKVQKAWEVLGS  SRA+YDRELQAAKGDA+GAESI LEDM              CRCGD
Sbjct: 61  FKVQKAWEVLGSSMSRAAYDRELQAAKGDAMGAESIGLEDMAVEDKGEIVELFYQCRCGD 120

Query: 121 CFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLKVRLVIDTNSSVSIDC 167
            FFIDSGEL+EMGYP+LR GSKVSLRT DALPAS+VLPCGSCSLKVRL+ID++S  SIDC
Sbjct: 121 YFFIDSGELEEMGYPMLRIGSKVSLRTFDALPASIVLPCGSCSLKVRLLIDSDSCASIDC 180

[Close]

BLAST of IVF0018555 vs. TAIR 10
Match: AT4G10130.1 (DNAJ heat shock N-terminal domain-containing protein )

HSP 1 Score: 160.2 bits (404), Expect = 1.4e-39
Identity = 84/178 (47.19%), Postives = 114/178 (64.04%), Query Frame = 0


Query: 1   MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY 60
           M      + ETYY++LS++EDAS++EIR SYRSA+L+ HPDKL    R S  D    E++
Sbjct: 1   MLVGENCVHETYYEILSVKEDASYEEIRNSYRSAILHSHPDKLNNTSRSSSDD----EKF 60

Query: 61  FKVQKAWEVLGSPKSRASYDRELQAAKGDAIGAESISLEDM-------------VCRCGD 120
            K+QKAWEVL   + R  YD +L++++ D I A+ IS+EDM              CRCGD
Sbjct: 61  LKIQKAWEVLSDAELRVVYDNDLRSSRHDGITADEISIEDMSVEITGDVIDLFYQCRCGD 120

Query: 121 CFFIDSGELDEMGYPLLRNGSKVSLRTLDALPASVVLPCGSCSLKVRLVIDTNSSVSI 166
            F +DS EL  MG+ LLR+G  V ++ L A  ASVVLPCGSCSLK R+ +D++  + I
Sbjct: 121 YFCVDSSELGTMGFALLRDGDFVYVKRLGAFVASVVLPCGSCSLKTRVWVDSDMKIPI 174

[Close]

BLAST of IVF0018555 vs. TAIR 10
Match: AT1G74250.1 (DNAJ heat shock N-terminal domain-containing protein )

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-07
Identity = 32/80 (40.00%), Postives = 47/80 (58.75%), Query Frame = 0


Query: 1  MSSSSGAIGETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIKGERY 60
          M+SSS +    +Y+VL + +++S DEIR+SYR   L  HPDKL      S  +     ++
Sbjct: 1  MASSSRSEKRCHYEVLGISKESSPDEIRSSYRRLALQRHPDKLMKAAGLSEAE--ATAQF 60

Query: 61 FKVQKAWEVLGSPKSRASYD 81
           ++  A+EVL  PK RA YD
Sbjct: 61 QELVHAYEVLSDPKERAWYD 78

[Close]

BLAST of IVF0018555 vs. TAIR 10
Match: AT4G13830.1 (DNAJ-like 20 )

HSP 1 Score: 51.2 bits (121), Expect = 9.2e-07
Identity = 25/75 (33.33%), Postives = 43/75 (57.33%), Query Frame = 0


Query: 11  TYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIK--GERYFKVQKAWE 70
           ++YD+L + E  +  EI+ +Y+     +HPD        S PD ++   +R+ +VQ+A+E
Sbjct: 66  SFYDLLGVTESVTLPEIKQAYKQLARKYHPD-------VSPPDRVEEYTDRFIRVQEAYE 125

Query: 71  VLGSPKSRASYDREL 84
            L  P+ R  YDR+L
Sbjct: 126 TLSDPRRRVLYDRDL 133

[Close]

BLAST of IVF0018555 vs. TAIR 10
Match: AT4G13830.2 (DNAJ-like 20 )

HSP 1 Score: 51.2 bits (121), Expect = 9.2e-07
Identity = 25/75 (33.33%), Postives = 43/75 (57.33%), Query Frame = 0


Query: 11  TYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDDIK--GERYFKVQKAWE 70
           ++YD+L + E  +  EI+ +Y+     +HPD        S PD ++   +R+ +VQ+A+E
Sbjct: 66  SFYDLLGVTESVTLPEIKQAYKQLARKYHPD-------VSPPDRVEEYTDRFIRVQEAYE 125

Query: 71  VLGSPKSRASYDREL 84
            L  P+ R  YDR+L
Sbjct: 126 TLSDPRRRVLYDRDL 133

[Close]

BLAST of IVF0018555 vs. TAIR 10
Match: AT1G59980.1 (ARG1-like 2 )

HSP 1 Score: 50.4 bits (119), Expect = 1.6e-06
Identity = 30/88 (34.09%), Postives = 49/88 (55.68%), Query Frame = 0


Query: 13  YDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCRKSHPDD-IKGERYFKVQKAWEVLG 72
           Y+VL +  +++  EI+++YR   L +HPDK        +PDD +  E + +V  A+EVL 
Sbjct: 25  YEVLGIPSNSTDQEIKSAYRRMALRYHPDK--------NPDDPVAAEMFKEVTFAYEVLS 84

Query: 73  SPKSRASYDRELQAAKGDAIGAESISLE 100
            P++R  YD        +A+G E+  LE
Sbjct: 85  DPENRRLYD----TTGSEAVGPENEDLE 100

The following BLAST results are available for this feature:

BLAST of IVF0018555 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XCA6	1.3e-10	34.09	Chaperone protein DnaJ OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) O...	[more]
B2RLJ0	1.8e-10	34.09	Chaperone protein DnaJ OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 2070...	[more]
P47138	5.6e-09	27.98	Diphthamide biosynthesis protein 4 OS=Saccharomyces cerevisiae (strain ATCC 2045...	[more]
B9KH92	7.4e-09	41.89	Chaperone protein DnaJ OS=Anaplasma marginale (strain Florida) OX=320483 GN=dnaJ...	[more]
Q5P9E0	7.4e-09	41.89	Chaperone protein DnaJ OS=Anaplasma marginale (strain St. Maries) OX=234826 GN=d...	[more]

BLAST of IVF0018555 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BBM0	5.0e-85	92.22	DPH4 homolog OS=Cucumis melo OX=3656 GN=LOC103487907 PE=3 SV=1	[more]
A0A5A7V202	1.3e-77	92.12	DPH4-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00...	[more]
A0A0A0LKX8	1.2e-75	86.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360030 PE=3 SV=1	[more]
A0A6J1KK19	6.8e-74	80.56	DPH4 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495973 PE=3 SV=1	[more]
A0A6J1KMK1	6.8e-74	80.56	DPH4 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495973 PE=3 SV=1	[more]

BLAST of IVF0018555 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444636.1	2.57e-111	92.22	PREDICTED: DPH4 homolog [Cucumis melo]	[more]
XP_038884890.1	9.99e-102	86.59	DPH4 homolog isoform X2 [Benincasa hispida]	[more]
KAA0060877.1	1.18e-99	92.12	DPH4-like protein [Cucumis melo var. makuwa]	[more]
XP_004152732.1	4.50e-99	86.71	DPH4 homolog [Cucumis sativus] >KGN62535.1 hypothetical protein Csa_022638 [Cucu...	[more]
XP_023523039.1	7.79e-97	80.56	DPH4 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0018555 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10130.1	1.4e-39	47.19	DNAJ heat shock N-terminal domain-containing protein	[more]
AT1G74250.1	1.1e-07	40.00	DNAJ heat shock N-terminal domain-containing protein	[more]
AT4G13830.1	9.2e-07	33.33	DNAJ-like 20	[more]
AT4G13830.2	9.2e-07	33.33	DNAJ-like 20	[more]
AT1G59980.1	1.6e-06	34.09	ARG1-like 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 31..46 score: 34.71 coord: 13..31 score: 38.0 coord: 75..94 score: 24.62 coord: 55..75 score: 24.2
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 10..75 e-value: 1.6E-10 score: 50.9
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 11..80 e-value: 2.8E-15 score: 56.2
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 11..83 score: 15.017158
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 11..71 e-value: 1.16554E-14 score: 62.5629
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 2..94 e-value: 3.1E-18 score: 67.7
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 10..83
IPR007872	DPH-type metal-binding domain	PFAM	PF05207	zf-CSL	coord: 101..157 e-value: 1.2E-7 score: 31.4
IPR007872	DPH-type metal-binding domain	PROSITE	PS51074	DPH_MB	coord: 103..158 score: 11.030781
IPR036671	DPH-type metal-binding domain superfamily	GENE3D	3.10.660.10	DPH Zinc finger	coord: 95..163 e-value: 2.0E-9 score: 38.9
IPR036671	DPH-type metal-binding domain superfamily	SUPERFAMILY	144217	CSL zinc finger	coord: 93..160
IPR044248	Diphthamide biosynthesis protein 3/4-like	PANTHER	PTHR21454	DPH3 HOMOLOG-RELATED	coord: 1..159
None	No IPR available	PANTHER	PTHR21454:SF31	DIPHTHAMIDE BIOSYNTHESIS PROTEIN 4	coord: 1..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0018555.2	IVF0018555.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017183	peptidyl-diphthamide biosynthetic process from peptidyl-histidine
biological_process	GO:0002098	tRNA wobble uridine modification
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding