IVF0018462 (gene) Melon (IVF77) v1

Overview


Name	IVF0018462
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	SWI/SNF complex subunit SWI3C
Location	chr07: 6525528 .. 6531732 (-)
RNA-Seq Expression	IVF0018462
Synteny	IVF0018462

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAAGAGAGAAGAAAAACCAAAGCTCCGAGTCACAGAACCATGGAGAGAGAGGAATTTTAGAGAGAGAAGGAGAACGAAAAAGCCCTATTTCTCTCTCCTCTTCTTCCCCATGCTTTCAATTTCGTAGCATAACAACAATCAACAGACCCCACATTTTCTCTTTCTGATTTTCCTTCAACAATGCCACCTTCCCCTTCCTTCCCATCTGGTAACTTCTTCTTAACCTAACTTTCTCTTTCTCTCTCTCTCTTTCTCTACAAATTTTCCCATCTTCAATTCTGTTTAAAGTTTGCTAATTTTTGTTTTTTTGTCTCCAACCCATCTCAGGGTCTCGTGGAAAATGGCGGAAAAAGAAGAGGGATTCACAAATTGGCCGTAGAAACAACTATTCCAACACTTACAATAACGGTACTAACCGGCATGATGATGATGATGAAGATGAAGACCTTGTTGCTGCTGAAAATGACGAAATGGAACGTGATAACAATGATGACTCTGAGGACCCTCAGATTGGGCTTCACCCCACGCCCAATTCCACTATTCAGGAGACTGAACTACTGTCGGATGATAAATTGCGAGTTTCTGAGTTTCCTCAGGTTGTTAAACGGGCTGTTACTCGGCCTCATTCTTCTGTTTTGGCTGTTGTGGCAATGGAGAGGACAAATCAGTATGGTGAGAGTAAAGGGGTGCCTGGAAATTCCTTGATTTTGGAGAATGTGTCTTACGGGCAGCTTCAGGCACTGTCTGCTATGCCCGCGGATAGTCCGGCTTTGCTGGATCAGGAGAGGGTGGAGGCTGGGAATGCTGCGTATGTAATAACTCCGCCGCCGATTATGGAAGGGCGTGGCGTGGTTAAGAGGTTTGGGAGTAGGGTACATGTTGTCCCTATGCACTCAGGTCTGATCCTCTCGTTCCCTTCAACTAATGTTTTGGGTAAAACAATTTGCATTAGCATCGTACCTTATATTTGTTGTGGGATGAGTTAGGAATTTTTAATGCAGTGAAATACCAACTTCAAAATCTAAGATATATTGTTGAATAGCTTGAATCCATTGATAATTAAATTAAGTTTTGTAGTCGTTAGTATGATCAAATTTAAGTCAAGATCTGTGTGCATAGGAAAATTATAGTAGATTTTGAGTGTGTTAGTATTAGTATATGCAGATAGCAAGTTTAATGCTAATTGAAGAAAAAAAAGGGGAGAGGAATATTATCTAACATATTACATGCCTACAGAAGATTTCTACTATGTGACAATTGATTTTTCGGAAACAGATTGGTTTTCACCTGCCACGGTGCATCGACTTGAGAGACAAGTAGTTCCGCATTTTTTCTCTGGGAAATTGCCTGACCGCACTCCTGAAAAGTATATGGAGATTCGAAATTTTGTTGTTGCCAAATACATGGAGAATCCAGAGAAAAGGGTCACAGTTTCAGATTGTCGAGGGTTGGTTGATGGTGTCAGTAATGAAGATTTAACTCGAATTGTTCGATTTCTTGATCATTGGGGTATTATTAATTATTGTGCTCCTACGCCTAGCTGTGAACCATGGAATAGCAATTCATACTTGAGAGAAGATATGAACGGTGAGATTCATGTGCCATCAGCTGCTTTGAAGCCTATTGATAGCTTGGTTAAATTTGACAAACCAAAATGTAGGCTCAAGGCAGCTGATGTCTATTCGGCACTTCCATGCCGCGATGACATTGATGGTTTGTGTGATTTGGATAACAGAATTCGAGAGCGTTTAGCTGAAAATCATTGTAGCTCTTGTTCTCGGTCTGTTCCCGTTGCATACTACCAGTCACAGAAGGAGGTTAGTTTCTTTCACCATATGTACTCCATTGTTTATCTGACTCAGGGTACCAGCATTACGAAGCTTGTATATAGGCCTGAAAGAATTATGAAGCTTGTAAATGATAAGTTCTAGAGACCTTAGGGTCTAGGCTATTCAATTTTGCAGGGGGAGGAAATAGTAGAGGTCTGTATGACTAGGCAGTTTTTTCCTCAAGCATAGCCATATCTGTATTTTTGTAGTTGTTTCTTTCTTCTGACCTTGTTGAAGATTTTGCCAACTATTTTTCTTTCATCACTGAACTTGCATCTACAGGATGTAATGTGTTAGATGGTGCACAAAAGAAGTCATGGGGATTAGCAATTGAATTAGAAGTCTTTAAACTTTCATCTAAGAGTAGAATTTCTAATCCTACCCACTGACCTCTGTCCTTTTCTAAGGCAGGTATATTGAGTTAGAACCATGTTTTTTTGGGGAAGACCATTGGACCAATCAAACGTTGTTGGCTTTTAGGTTTCCATGGGTTTTTTTATTCTGCTTAATTGCATTCAAAAGCTCTGTAATTTAAGTGTTTACAGGGGAAATCAAAAGATAATATTTCATCTTTGAAGGAACATTAGCGATGGTTAGGTAAAAGACAGTATTTTTGTTTTGGGAATCATGGGAAAGGGGCCTTTGCTTGTTATGAGGTGGAGCATGCATCAAAGATTGGATCTTGAAGTCATATGAAATCTTTTACCTTTTGATAGTGATCCTATACCATGCAAGATTTTACTTCTGATGCAGAACTTTTAGAAATCTTTTGAATTCTTTTGGATCTTAGTTCTTTAATGACTTATTGGCATTCTTGTTGCAGGTTGATGTTTTACTTTGCTCTGACTGCTTTCATGAAGGCAAATACGTTGCTGGCCATTCAAGCATTGATTTTCTGAGGGTGGACATGGCGAAAGATTATGGTGAACTAGATAGTGAAAATTGGACTGATCAAGAAACTCTATTGCTTTTAGAGGCAATAGAATTGTATAATGAGAATTGGAATGAAATTACCGAACACGTTGGGTCCAAGTCTAAAGCTCAGTGCATTATACATTTTCTCCGTTTATCAGTGGAGGATGGCCTTCTAGAAAATGTTGATGTGCCTGGGGTTTCTCTCTCATCAAATGCTTCACATGGAGGAGATAGTGAGAAATCACGGTCAAATATGAATGGAAACGTAGCAGGTATTTTGAACTTTTGACTGACAGCTTCTTCATGACTTATTGACATATTCTTTCTAAACATATATTTATTTCTTAGGATCTTCCACTCAAGATAATAAAGAGATGCATGATAGGCTACCCTTTGCCAATTCTGGGAATCCAGTCATGGCGTTGGTATGTGCCCATTTATTTGATGCTTTATACGTCTTTCAGTTCTGAAGAATTAAATTGTTTCAGTACGATATTGCATTGCTATAATATTTCCTATGTTTGCCTATATCTTAGTTCTTCAATCAAGTAAAAGTTTTGCTATCTACATCTTTTTTTTTTTTTGGGGGGGGGGGATGATGTGCCATCATTCCATTGTGAGTGAATAACTTGTGAGCATTAGACCAGAAGAAGGTTTACTGTTTGATGATTTGGAACAATGAGCATAGCACAATTTAGCAGGGAAGAGAATGGTGAGGAGTGTTTGAAGCTGTTTGAGACTTGGAGTGAGCTAGTAGTAGTACTAGTATCAGTGGCTTGTGAGTAATAAGAATGTGCACAAGATAGGTAGAATCCAGAATCAAATGGTAAGTGGTTGGTAAGTTCAGGTTCTCTGATGTCATAGTTTAAAGTATGGTGGTCTGTCGTCACATGTCAATACAGAACTGGGTTAGGAGGGTTCAGAGGATGTCTAGAAGATTAGTTGAGCGAGGTGCTCTTAAATTGACCTGACTCTCACTATTATTGTTGGAAAGAACTGAAAAGAAGGGCACAGAATGTCGAGCTCTTTTCCTATCGTCTTATCTTAATTCTTACCTTCAACATGAATGCAAAATCATATGTTTAAATACAAATGCAAGCAAAGGGTTTACATAAATTTTACAGTTGAGTCCAGCCTATCTCAATAGATGATAGACTGGGCAATATCTTGACATATGCTTCTTTTTCCACCGTAGATGGCTTATCTTGATGTGCCTTTAGAGCGCCTATATTCCACGCTTTTTAATTTACAATTGACATATTATTCTGCTTGGACTCTTCATTTACAAAAATGAGAGTTTCATTCTGTAAATAGGGTTGTAATTGATTTAACTTTTGGACATTTGCAAGGTTGCTTTTCTCGCATCTGCTATTGGACCAAGAGTTGCTGCATCTTGTGCTCATGCATCCTTAGCTGCATTATCTGAGGACAGCGTAGCTTCGTCTGGGAGCATCTTTCACATGGAGGGTTCTGTAAACGCTAACAGGTAACTTTCATTTTCTTACTGATCATAAATGTTATATCACTTTGATATTTCATACGGTAGGGTGTACTGTACACCATTGATATTTCATACCATCAATGTAATAGCTTATAAATAAAAAGAAAAGAAAAGAAGAAAAAAAAGAACAAAGAAAAACATTGATGTATCACTAATAGTAATAGGTTAGTTTTATTTATTCAAGAGATGTCTTTCTTCCTACTGCACACATAAAGGAGGTTGTGGATGCATGTGTATTATACTGAGGAACAGGGAGGTAGAGAATAGCACATACTGCATCTAAACTAATGCTATATGCGAGACATTTTATAGGATGAAACAGGTTCCTACTGGCTACTTCCCACTTCCCGGAGCTAATCTTGTGAATGCTCTATTATGTATTATGATGCAGTTACATCAGTTTTATTTTTAAATTATAATTTATTTAAAGATTGACATTTCTTTTCCAATATTAAGGATGAATGTGGACGCCAAACAAGCCAGGAAGGTAGCTCCTATGGAGAACTTCCAAATTCAATTGATCAAAAAGGTTTGGTTTGAGACTTTTACTTATTCTTGTTCTCTTTCTTGACTAATGTTTTATAATTACTCTGAAATTTATTCAATATATGTGGCATTGGCCAAATTCAGATGAGAACAAGGCAGAGACAGAAGCAACACTATTATCTTCTGAAAGAGTTAAAGTTGCTGCAAAAGCAGGCCTTGCTGCTGCTGCAACAAGGCAAAATTGTTTGCTGACCACGAAGAACGAGAAATCCAACGACTGTCTGCTAATATTATAAATCATCAGGTACCGCAGCTAAAATTTAGTATGAGTAGTCGGCATTTTTGCTTTAATCATCCAGAACTAGACCTTTATAAGTTGATGTTCTGCTTCATCTACATTTTTAGTGTGTCGGACACATGTCCGATGTATGTTCATGCTTCCTAAGAAATGACTGACGGAGGGCTCTGAACATGCATGAATTGTATTTGACCATTTTCTCCCAAAATTTCCTGTCCTTACTTTTGCATCCAAGTGTGTCAGTTTTTTTATTGGTTAAAAGCCTGTTCACAAGTTTAGGCCACATATTTTTCTAATTCAGATAGATCGTTGGTCTTGTTTGTCAGAAAGGTTGATTTGAAACTATGTATTTCACTTGTAAAAAGAAGTTGATGTCTCTGTTTTATCTAAATTTATGCAACAGTTGAAGAGACTGGAGCTGAAGCTGAAGCAGTTTGCAGAAGTAGAAACCTTCTTGATGAAGGAATGTGAACAAGTTGAGAGGACAAGGCAGAGGTTTGTTGCAGAGCGAGCAAGAATGTTAGGTGTTCAATTTGGACCTGCTGGAGTTACGCCACCTGCGAGTTTACCGGGCGTTATACCTTCCATGGTAGTAAACAACAGCAACACAAACAGTAGGCCGAATATGATCGCACCTCCAGCTTCACAGCCGAGTGTTTCAGGGTACAGCAACAACCAACAACCACTTCACCCCCACATGTCATATATGCCTCGACAGCCAATGTTTGGTTTGGGACAAAGACTACCCTTGTCAGCAATTCAGCAGCAGCAGCAACAACAACAACTGCCCTCGACAACTTCTTCTAATGCCATGTTCAACGGTCCAAGCAATGCACAGCCTTCTCTCAGTCATCCAATGATGAGGCCAGTTACAGGATCCAGCTCTGGCCTAGGCTGAATTTGGAAGAAGATTACTTGAATTAATTGATTTCCTTTGAAGGTTGATGATTTGTGCAACCATGAAAAAAGAAAGGGGCAGGTAAAATAGGAAAAATGATAATATTCCATGAGAGATTTGTTCATTTGTCTAACCTTTCTTTTTTGGGAGCAAAAAGAAGGGAAATTAACCTGAGGCAATAGTAGGGATTGTAATTTGTAATTGCATTCAATTAGATGTAAAAAGAACAAAAGAGAAAAGAGGAAATGGGAGAAAGTTAGTTGTTTAAGTTTTTTT

mRNA sequence

AGGAAGAGAGAAGAAAAACCAAAGCTCCGAGTCACAGAACCATGGAGAGAGAGGAATTTTAGAGAGAGAAGGAGAACGAAAAAGCCCTATTTCTCTCTCCTCTTCTTCCCCATGCTTTCAATTTCGTAGCATAACAACAATCAACAGACCCCACATTTTCTCTTTCTGATTTTCCTTCAACAATGCCACCTTCCCCTTCCTTCCCATCTGGGTCTCGTGGAAAATGGCGGAAAAAGAAGAGGGATTCACAAATTGGCCGTAGAAACAACTATTCCAACACTTACAATAACGGTACTAACCGGCATGATGATGATGATGAAGATGAAGACCTTGTTGCTGCTGAAAATGACGAAATGGAACGTGATAACAATGATGACTCTGAGGACCCTCAGATTGGGCTTCACCCCACGCCCAATTCCACTATTCAGGAGACTGAACTACTGTCGGATGATAAATTGCGAGTTTCTGAGTTTCCTCAGGTTGTTAAACGGGCTGTTACTCGGCCTCATTCTTCTGTTTTGGCTGTTGTGGCAATGGAGAGGACAAATCAGTATGGTGAGAGTAAAGGGGTGCCTGGAAATTCCTTGATTTTGGAGAATGTGTCTTACGGGCAGCTTCAGGCACTGTCTGCTATGCCCGCGGATAGTCCGGCTTTGCTGGATCAGGAGAGGGTGGAGGCTGGGAATGCTGCGTATGTAATAACTCCGCCGCCGATTATGGAAGGGCGTGGCGTGGTTAAGAGGTTTGGGAGTAGGGTACATGTTGTCCCTATGCACTCAGATTGGTTTTCACCTGCCACGGTGCATCGACTTGAGAGACAAGTAGTTCCGCATTTTTTCTCTGGGAAATTGCCTGACCGCACTCCTGAAAAGTATATGGAGATTCGAAATTTTGTTGTTGCCAAATACATGGAGAATCCAGAGAAAAGGGTCACAGTTTCAGATTGTCGAGGGTTGGTTGATGGTGTCAGTAATGAAGATTTAACTCGAATTGTTCGATTTCTTGATCATTGGGGTATTATTAATTATTGTGCTCCTACGCCTAGCTGTGAACCATGGAATAGCAATTCATACTTGAGAGAAGATATGAACGGTGAGATTCATGTGCCATCAGCTGCTTTGAAGCCTATTGATAGCTTGGTTAAATTTGACAAACCAAAATGTAGGCTCAAGGCAGCTGATGTCTATTCGGCACTTCCATGCCGCGATGACATTGATGGTTTGTGTGATTTGGATAACAGAATTCGAGAGCGTTTAGCTGAAAATCATTGTAGCTCTTGTTCTCGGTCTGTTCCCGTTGCATACTACCAGTCACAGAAGGAGGTTGATGTTTTACTTTGCTCTGACTGCTTTCATGAAGGCAAATACGTTGCTGGCCATTCAAGCATTGATTTTCTGAGGGTGGACATGGCGAAAGATTATGGTGAACTAGATAGTGAAAATTGGACTGATCAAGAAACTCTATTGCTTTTAGAGGCAATAGAATTGTATAATGAGAATTGGAATGAAATTACCGAACACGTTGGGTCCAAGTCTAAAGCTCAGTGCATTATACATTTTCTCCGTTTATCAGTGGAGGATGGCCTTCTAGAAAATGTTGATGTGCCTGGGGTTTCTCTCTCATCAAATGCTTCACATGGAGGAGATAGTGAGAAATCACGGTCAAATATGAATGGAAACGTAGCAGGATCTTCCACTCAAGATAATAAAGAGATGCATGATAGGCTACCCTTTGCCAATTCTGGGAATCCAGTCATGGCGTTGGTTGCTTTTCTCGCATCTGCTATTGGACCAAGAGTTGCTGCATCTTGTGCTCATGCATCCTTAGCTGCATTATCTGAGGACAGCGTAGCTTCGTCTGGGAGCATCTTTCACATGGAGGGTTCTGTAAACGCTAACAGGATGAATGTGGACGCCAAACAAGCCAGGAAGGTAGCTCCTATGGAGAACTTCCAAATTCAATTGATCAAAAAGATGAGAACAAGGCAGAGACAGAAGCAACACTATTATCTTCTGAAAGAGTTAAAGTTGCTGCAAAAGCAGGCCTTGCTGCTGCTGCAACAAGGCAAAATTGTTTGCTGACCACGAAGAACGAGAAATCCAACGACTGTCTGCTAATATTATAAATCATCAGTTGAAGAGACTGGAGCTGAAGCTGAAGCAGTTTGCAGAAGTAGAAACCTTCTTGATGAAGGAATGTGAACAAGTTGAGAGGACAAGGCAGAGGTTTGTTGCAGAGCGAGCAAGAATGTTAGGTGTTCAATTTGGACCTGCTGGAGTTACGCCACCTGCGAGTTTACCGGGCGTTATACCTTCCATGGTAGTAAACAACAGCAACACAAACAGTAGGCCGAATATGATCGCACCTCCAGCTTCACAGCCGAGTGTTTCAGGGTACAGCAACAACCAACAACCACTTCACCCCCACATGTCATATATGCCTCGACAGCCAATGTTTGGTTTGGGACAAAGACTACCCTTGTCAGCAATTCAGCAGCAGCAGCAACAACAACAACTGCCCTCGACAACTTCTTCTAATGCCATGTTCAACGGTCCAAGCAATGCACAGCCTTCTCTCAGTCATCCAATGATGAGGCCAGTTACAGGATCCAGCTCTGGCCTAGGCTGAATTTGGAAGAAGATTACTTGAATTAATTGATTTCCTTTGAAGGTTGATGATTTGTGCAACCATGAAAAAAGAAAGGGGCAGGTAAAATAGGAAAAATGATAATATTCCATGAGAGATTTGTTCATTTGTCTAACCTTTCTTTTTTGGGAGCAAAAAGAAGGGAAATTAACCTGAGGCAATAGTAGGGATTGTAATTTGTAATTGCATTCAATTAGATGTAAAAAGAACAAAAGAGAAAAGAGGAAATGGGAGAAAGTTAGTTGTTTAAGTTTTTTT

Coding sequence (CDS)

ATGCCACCTTCCCCTTCCTTCCCATCTGGGTCTCGTGGAAAATGGCGGAAAAAGAAGAGGGATTCACAAATTGGCCGTAGAAACAACTATTCCAACACTTACAATAACGGTACTAACCGGCATGATGATGATGATGAAGATGAAGACCTTGTTGCTGCTGAAAATGACGAAATGGAACGTGATAACAATGATGACTCTGAGGACCCTCAGATTGGGCTTCACCCCACGCCCAATTCCACTATTCAGGAGACTGAACTACTGTCGGATGATAAATTGCGAGTTTCTGAGTTTCCTCAGGTTGTTAAACGGGCTGTTACTCGGCCTCATTCTTCTGTTTTGGCTGTTGTGGCAATGGAGAGGACAAATCAGTATGGTGAGAGTAAAGGGGTGCCTGGAAATTCCTTGATTTTGGAGAATGTGTCTTACGGGCAGCTTCAGGCACTGTCTGCTATGCCCGCGGATAGTCCGGCTTTGCTGGATCAGGAGAGGGTGGAGGCTGGGAATGCTGCGTATGTAATAACTCCGCCGCCGATTATGGAAGGGCGTGGCGTGGTTAAGAGGTTTGGGAGTAGGGTACATGTTGTCCCTATGCACTCAGATTGGTTTTCACCTGCCACGGTGCATCGACTTGAGAGACAAGTAGTTCCGCATTTTTTCTCTGGGAAATTGCCTGACCGCACTCCTGAAAAGTATATGGAGATTCGAAATTTTGTTGTTGCCAAATACATGGAGAATCCAGAGAAAAGGGTCACAGTTTCAGATTGTCGAGGGTTGGTTGATGGTGTCAGTAATGAAGATTTAACTCGAATTGTTCGATTTCTTGATCATTGGGGTATTATTAATTATTGTGCTCCTACGCCTAGCTGTGAACCATGGAATAGCAATTCATACTTGAGAGAAGATATGAACGGTGAGATTCATGTGCCATCAGCTGCTTTGAAGCCTATTGATAGCTTGGTTAAATTTGACAAACCAAAATGTAGGCTCAAGGCAGCTGATGTCTATTCGGCACTTCCATGCCGCGATGACATTGATGGTTTGTGTGATTTGGATAACAGAATTCGAGAGCGTTTAGCTGAAAATCATTGTAGCTCTTGTTCTCGGTCTGTTCCCGTTGCATACTACCAGTCACAGAAGGAGGTTGATGTTTTACTTTGCTCTGACTGCTTTCATGAAGGCAAATACGTTGCTGGCCATTCAAGCATTGATTTTCTGAGGGTGGACATGGCGAAAGATTATGGTGAACTAGATAGTGAAAATTGGACTGATCAAGAAACTCTATTGCTTTTAGAGGCAATAGAATTGTATAATGAGAATTGGAATGAAATTACCGAACACGTTGGGTCCAAGTCTAAAGCTCAGTGCATTATACATTTTCTCCGTTTATCAGTGGAGGATGGCCTTCTAGAAAATGTTGATGTGCCTGGGGTTTCTCTCTCATCAAATGCTTCACATGGAGGAGATAGTGAGAAATCACGGTCAAATATGAATGGAAACGTAGCAGGATCTTCCACTCAAGATAATAAAGAGATGCATGATAGGCTACCCTTTGCCAATTCTGGGAATCCAGTCATGGCGTTGGTTGCTTTTCTCGCATCTGCTATTGGACCAAGAGTTGCTGCATCTTGTGCTCATGCATCCTTAGCTGCATTATCTGAGGACAGCGTAGCTTCGTCTGGGAGCATCTTTCACATGGAGGGTTCTGTAAACGCTAACAGGATGAATGTGGACGCCAAACAAGCCAGGAAGGTAGCTCCTATGGAGAACTTCCAAATTCAATTGATCAAAAAGATGAGAACAAGGCAGAGACAGAAGCAACACTATTATCTTCTGAAAGAGTTAAAGTTGCTGCAAAAGCAGGCCTTGCTGCTGCTGCAACAAGGCAAAATTGTTTGCTGA

Protein sequence

MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMERDNNDDSEDPQIGLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAMERTNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIMEGRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLREDMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAENHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLSSNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVAASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQARKVAPMENFQIQLIKKMRTRQRQKQHYYLLKELKLLQKQALLLLQQGKIVC

Homology

[Close]

BLAST of IVF0018462 vs. ExPASy Swiss-Prot
Match: Q9XI07 (SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana OX=3702 GN=SWI3C PE=1 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 1.7e-167
Identity = 316/559 (56.53%), Postives = 397/559 (71.02%), Query Frame = 0


Query: 12  RGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMERDNNDDSEDPQI 71
           RGKW++KKR      R            + ++D E+ED     N+  E D+ +++++ Q 
Sbjct: 8   RGKWKRKKRGGLSAARK---------PKQEEEDMEEEDEENNNNNNEEMDDVENADELQQ 67

Query: 72  GLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAMERTNQYGESKGVP 131
               TP+  +   E++ D   R+S+FP VVKR V RPH+SV+AVVA ER    GE++G  
Sbjct: 68  NGGATPDPGLGIGEVVEDSGSRISDFPAVVKRVVIRPHASVMAVVAAERAGLIGETRG-Q 127

Query: 132 GNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIMEGRGVVKRFGSR 191
           G+   LEN+S+GQLQALS +PADS   LD ER +  ++AYVI+PPPIM+G GVVKRFG  
Sbjct: 128 GSLPALENISFGQLQALSTVPADS---LDLERSDGSSSAYVISPPPIMDGEGVVKRFGDL 187

Query: 192 VHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEKRVT 251
           VHV+PMHSDWF+P TV RLERQVVP FFSGK P+ TPE YME RN +V+KY+ENPEK +T
Sbjct: 188 VHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKTLT 247

Query: 252 VSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCE-PWNSNSYLREDMNGEIHVPS 311
           +SDC+GLVDGV  ED  R+ RFLDHWGIINYCA   S   P    S +RED NGE++VPS
Sbjct: 248 ISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTNGEVNVPS 307

Query: 312 AALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAENHCSSCSRSV 371
           AAL  IDSL+KFDKP CR K  +VYS+LP  D      DLD RIRE L ++HC+ CSR +
Sbjct: 308 AALTSIDSLIKFDKPNCRHKGGEVYSSLPSLDGDSP--DLDIRIREHLCDSHCNHCSRPL 367

Query: 372 PVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSENWTDQETLLLL 431
           P  Y+QSQK+ D+LLC DCFH G++V GHS +DF+RVD  K YG+ D +NWTDQETLLLL
Sbjct: 368 PTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGDNWTDQETLLLL 427

Query: 432 EAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLSSNASHGGDSE 491
           EA+ELYNENW +I +HVGSKSKAQCI+HFLRL VEDGLL+NV+V GV+ + N ++G D +
Sbjct: 428 EAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLDNVEVSGVTNTENPTNGYDHK 487

Query: 492 KSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVAASCAHASLAA 551
            + S  NG++ G S Q   +   +LPF  S NPVMALVAFLASA+GPRVAASCAH SL+ 
Sbjct: 488 GTDS--NGDLPGYSEQ-GSDTEIKLPFVKSPNPVMALVAFLASAVGPRVAASCAHESLSV 547

Query: 552 LSEDSVASSGSIFHMEGSV 570
           LSED    S  +   E S+
Sbjct: 548 LSEDDRMKSEGMQGKEASL 548

[Close]

BLAST of IVF0018462 vs. ExPASy Swiss-Prot
Match: Q53KK6 (SWI/SNF complex subunit SWI3C homolog OS=Oryza sativa subsp. japonica OX=39947 GN=SWI3C PE=1 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 6.2e-133
Identity = 273/560 (48.75%), Postives = 355/560 (63.39%), Query Frame = 0


Query: 1   MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMER 60
           MP   S  S SR KWRK KR+       +  ++       H DD +     AA N++ + 
Sbjct: 1   MPRKASSTSDSRLKWRKWKRNPTASPSPSNRSSAAAAAADHSDDSDS----AAVNEDDDS 60

Query: 61  DNNDDSEDPQIGLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAMER 120
              +D++D  +     P   ++E E+L   +  VS FP   +R V RPH SVLAV+A ER
Sbjct: 61  AVPEDADDETLAGAEDPVLDLREAEVLPSAE-PVSAFPVATRRVVNRPHPSVLAVIAAER 120

Query: 121 TNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPAL-LDQERVEAGNAAYVITPPPIM 180
           +   GE       + +LEN+SYGQ Q LS +  D  +L  D ++     + YV TPP +M
Sbjct: 121 SACAGEGSAAVAAAPVLENISYGQQQVLSGVLPDHASLATDTDK----PSTYVCTPPNLM 180

Query: 181 EGRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVV 240
           EG GV K+F  R+HVVP HSDWFSP  VHRLERQVVP FFSGK P  TPEKYM +RN V+
Sbjct: 181 EGHGVTKQFQGRLHVVPKHSDWFSPGIVHRLERQVVPQFFSGKSPGNTPEKYMLLRNKVI 240

Query: 241 AKYMENPEKRVTVSDCRGLVDGVSN-EDLTRIVRFLDHWGIINYCAPTPSCEPWN-SNSY 300
           AKY+ENP KR+  ++C+GLV   +   DL+RIVRFLD WGIINY A          + S 
Sbjct: 241 AKYLENPSKRLAFAECQGLVANTAELYDLSRIVRFLDTWGIINYLASGSVHRGLRMATSL 300

Query: 301 LREDMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDID---GLCDLDNRI 360
           LRE+  GE+ + +A LK ID L+ FD+PKC L+A D+ S     + +D   GL +LD +I
Sbjct: 301 LREEPTGELQLLTAPLKSIDGLILFDRPKCNLQAEDISSLASNSEVVDFDAGLAELDGKI 360

Query: 361 RERLAENHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYG 420
           RERL+E+ CS C + +   +YQS KE D+ LCSDCFH+ +Y+ GHSS+DF R+D   D  
Sbjct: 361 RERLSESSCSYCLQPLTSLHYQSLKEADIALCSDCFHDARYITGHSSLDFQRIDGDNDRS 420

Query: 421 ELDSENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDV 480
           E D ++WTDQETLLLLE IE YN+NWN I EHVG+KSKAQCI HF+RL VEDGLLEN++V
Sbjct: 421 ENDGDSWTDQETLLLLEGIEKYNDNWNNIAEHVGTKSKAQCIYHFIRLPVEDGLLENIEV 480

Query: 481 PGVSLSSNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASA 540
           P  S+   A   G       + NG+ +G+  Q      ++LPF NS NPVM+LV FLASA
Sbjct: 481 PDASVPFRAETNG---YPHLDCNGSTSGNLPQ-KIPPDNQLPFINSSNPVMSLVGFLASA 540

Query: 541 IGPRVAASCAHASLAALSED 555
           +GPRVAASCA A+L+ L+ D
Sbjct: 541 MGPRVAASCASAALSVLTVD 547

[Close]

BLAST of IVF0018462 vs. ExPASy Swiss-Prot
Match: Q8VY05 (SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana OX=3702 GN=SWI3D PE=1 SV=3)

HSP 1 Score: 191.0 bits (484), Expect = 4.0e-47
Identity = 139/444 (31.31%), Postives = 202/444 (45.50%), Query Frame = 0


Query: 190 SRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEKR 249
           S VHVVP H  WFS   +H LE + +P FF+GKL  RT E Y EIRN+++ K+  NP  +
Sbjct: 142 SNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQ 201

Query: 250 VTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLREDMNGEIHVP 309
           + + D   L  G  +E    ++ FLD+WG+IN+  P P  +  ++ S   +  + E  + 
Sbjct: 202 IELKDLTELEVG-DSEAKQEVMEFLDYWGLINF-HPFPPTDTGSTASDHDDLGDKESLLN 261

Query: 310 SAALKPIDSLVKFDKPKCRLKAADVYSAL-PCRDDIDGLCDLDNRIRERLAENHCSSCSR 369
           S     +D        K R  A    S L P     D L   +        E HC+SCS 
Sbjct: 262 SLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEG----PAVEYHCNSCSA 321

Query: 370 SVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSENWTDQETLL 429
                 Y   K+ D  LC++CF+ GK+ +  SS DF+ ++ A+  G + S  WTDQETLL
Sbjct: 322 DCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPG-VGSGKWTDQETLL 381

Query: 430 LLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVP----------GVS 489
           LLEA+E++ ENWNEI EHV +K+KAQC++HFL++ +ED  L+ +D             VS
Sbjct: 382 LLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKDPISKDTTDLAVS 441

Query: 490 LSSNA------------------------SHGGDSEKSRSNMNGNVAGSSTQDNKEM--- 549
              N+                            D  + + +   +  G ++++  EM   
Sbjct: 442 KDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGNEEKVSQESSKPGDASEETNEMEAE 501

Query: 550 -----------------------------------HDRLP-----FANSGNPVMALVAFL 556
                                              H   P     FA+ GNPVM L AFL
Sbjct: 502 QKTPKLETAIEERCKDEADENIALKALTEAFEDVGHSSTPEASFSFADLGNPVMGLAAFL 561

[Close]

BLAST of IVF0018462 vs. ExPASy Swiss-Prot
Match: Q92922 (SWI/SNF complex subunit SMARCC1 OS=Homo sapiens OX=9606 GN=SMARCC1 PE=1 SV=3)

HSP 1 Score: 154.8 bits (390), Expect = 3.2e-36
Identity = 108/362 (29.83%), Postives = 167/362 (46.13%), Query Frame = 0


Query: 194 VVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEKRVTVS 253
           ++P ++ WF    +H +ER+ +P FF+GK   +TPE Y+  RNF++  Y  NP++ +T +
Sbjct: 450 IIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 509

Query: 254 DCRGLVDGVSNEDLTRIVR---FLDHWGIINYCAPTPSCEPWNSNSYLREDMNGEIHVPS 313
            CR  + G    D+  ++R   FL+ WG++NY    P   P           N     PS
Sbjct: 510 ACRRNLTG----DVCAVMRVHAFLEQWGLVNY-QVDPESRPMAMGPPPTPHFNVLADTPS 569

Query: 314 AALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAENHCSSCSRSV 373
             L P+            L++  V +A         + +   + +E+             
Sbjct: 570 -GLVPL-----------HLRSPQVPAA-------QQMLNFPEKNKEK------------- 629

Query: 374 PVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSENWTDQETLLLL 433
           PV         D+                    + +  +AK  G      WT+QETLLLL
Sbjct: 630 PVDLQNFGLRTDI--------------------YSKKTLAKSKGASAGREWTEQETLLLL 689

Query: 434 EAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLSSNASHGGDSE 493
           EA+E+Y ++WN+++EHVGS+++ +CI+HFLRL +ED  LEN D    SL   A       
Sbjct: 690 EALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSD---ASLGPLA------- 723

Query: 494 KSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVAASCAHASLAA 553
                                +  +PF+ SGNPVM+ VAFLAS + PRVA++ A A+L  
Sbjct: 750 ---------------------YQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEE 723

[Close]

BLAST of IVF0018462 vs. ExPASy Swiss-Prot
Match: P97496 (SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1 PE=1 SV=2)

HSP 1 Score: 154.5 bits (389), Expect = 4.1e-36
Identity = 107/362 (29.56%), Postives = 167/362 (46.13%), Query Frame = 0


Query: 194 VVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEKRVTVS 253
           ++P ++ WF    +H +ER+ +P FF+GK   +TPE Y+  RNF++  Y  NP++ +T +
Sbjct: 449 IIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 508

Query: 254 DCRGLVDGVSNEDLTRIVR---FLDHWGIINYCAPTPSCEPWNSNSYLREDMNGEIHVPS 313
            CR  + G    D+  ++R   FL+ WG++NY    P   P           N     PS
Sbjct: 509 ACRRNLTG----DVCAVMRVHAFLEQWGLVNY-QVDPESRPMAMGPPPTPHFNVLADTPS 568

Query: 314 AALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAENHCSSCSRSV 373
             L P+            L++  V +A         + +   + +E+             
Sbjct: 569 -GLVPL-----------HLRSPQVPAA-------QQMLNFPEKNKEK------------- 628

Query: 374 PVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSENWTDQETLLLL 433
           P+         D+                    + +  +AK  G      WT+QETLLLL
Sbjct: 629 PIDLQNFGLRTDI--------------------YSKKTLAKSKGASAGREWTEQETLLLL 688

Query: 434 EAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLSSNASHGGDSE 493
           EA+E+Y ++WN+++EHVGS+++ +CI+HFLRL +ED  LEN D    SL   A       
Sbjct: 689 EALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSD---ASLGPLA------- 722

Query: 494 KSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVAASCAHASLAA 553
                                +  +PF+ SGNPVM+ VAFLAS + PRVA++ A A+L  
Sbjct: 749 ---------------------YQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEE 722

[Close]

BLAST of IVF0018462 vs. ExPASy TrEMBL
Match: A0A5D3E339 (SWI/SNF complex subunit SWI3C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold587G00020 PE=4 SV=1)

HSP 1 Score: 1160.6 bits (3001), Expect = 0.0e+00
Identity = 582/583 (99.83%), Postives = 583/583 (100.00%), Query Frame = 0


Query: 1   MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMER 60
           MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMER
Sbjct: 1   MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMER 60

Query: 61  DNNDDSEDPQIGLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAMER 120
           DNNDDSEDPQIGLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAMER
Sbjct: 61  DNNDDSEDPQIGLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAMER 120

Query: 121 TNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME 180
           TNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME
Sbjct: 121 TNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME 180

Query: 181 GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA 240
           GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA
Sbjct: 181 GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA 240

Query: 241 KYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE 300
           KYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE
Sbjct: 241 KYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE 300

Query: 301 DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAE 360
           DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAE
Sbjct: 301 DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAE 360

Query: 361 NHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSEN 420
           NHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSEN
Sbjct: 361 NHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSEN 420

Query: 421 WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS 480
           WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS
Sbjct: 421 WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS 480

Query: 481 SNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVA 540
           SNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVA
Sbjct: 481 SNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVA 540

Query: 541 ASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQARK 584
           ASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQAR+
Sbjct: 541 ASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQARE 583

[Close]

BLAST of IVF0018462 vs. ExPASy TrEMBL
Match: A0A1S3B9W1 (SWI/SNF complex subunit SWI3C OS=Cucumis melo OX=3656 GN=LOC103487606 PE=4 SV=1)

HSP 1 Score: 1160.6 bits (3001), Expect = 0.0e+00
Identity = 582/583 (99.83%), Postives = 583/583 (100.00%), Query Frame = 0


Query: 1   MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMER 60
           MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMER
Sbjct: 1   MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMER 60

Query: 61  DNNDDSEDPQIGLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAMER 120
           DNNDDSEDPQIGLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAMER
Sbjct: 61  DNNDDSEDPQIGLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAMER 120

Query: 121 TNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME 180
           TNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME
Sbjct: 121 TNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME 180

Query: 181 GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA 240
           GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA
Sbjct: 181 GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA 240

Query: 241 KYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE 300
           KYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE
Sbjct: 241 KYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE 300

Query: 301 DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAE 360
           DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAE
Sbjct: 301 DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAE 360

Query: 361 NHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSEN 420
           NHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSEN
Sbjct: 361 NHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSEN 420

Query: 421 WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS 480
           WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS
Sbjct: 421 WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS 480

Query: 481 SNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVA 540
           SNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVA
Sbjct: 481 SNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVA 540

Query: 541 ASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQARK 584
           ASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQAR+
Sbjct: 541 ASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQARE 583

[Close]

BLAST of IVF0018462 vs. ExPASy TrEMBL
Match: A0A0A0L361 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361800 PE=4 SV=1)

HSP 1 Score: 1149.0 bits (2971), Expect = 0.0e+00
Identity = 573/583 (98.28%), Postives = 581/583 (99.66%), Query Frame = 0


Query: 1   MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMER 60
           MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNT+NNGTNRHDDDDEDEDLVAAENDEMER
Sbjct: 1   MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTFNNGTNRHDDDDEDEDLVAAENDEMER 60

Query: 61  DNNDDSEDPQIGLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAMER 120
           DNNDDSEDPQIGLHPTPNSTIQE ELLSDDK RVSEFPQVVKRAVTRPHSSVLAVVAMER
Sbjct: 61  DNNDDSEDPQIGLHPTPNSTIQEPELLSDDKFRVSEFPQVVKRAVTRPHSSVLAVVAMER 120

Query: 121 TNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME 180
           TNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME
Sbjct: 121 TNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME 180

Query: 181 GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA 240
           GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA
Sbjct: 181 GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA 240

Query: 241 KYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE 300
           KYMENPEKRVTVSDC+GLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE
Sbjct: 241 KYMENPEKRVTVSDCQGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE 300

Query: 301 DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAE 360
           DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAE
Sbjct: 301 DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAE 360

Query: 361 NHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSEN 420
           NHCSSCSRSVP+AYYQSQKEVDVLLCSDCFHEGKYVAGHSS+DFLRVDMAKDYGELDSEN
Sbjct: 361 NHCSSCSRSVPIAYYQSQKEVDVLLCSDCFHEGKYVAGHSSVDFLRVDMAKDYGELDSEN 420

Query: 421 WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS 480
           WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS
Sbjct: 421 WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS 480

Query: 481 SNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVA 540
           S+ASHGGDSEKSRSNMNGN+AGSS+QDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVA
Sbjct: 481 SSASHGGDSEKSRSNMNGNIAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVA 540

Query: 541 ASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQARK 584
           ASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQAR+
Sbjct: 541 ASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQARE 583

[Close]

BLAST of IVF0018462 vs. ExPASy TrEMBL
Match: A0A6J1IGH8 (SWI/SNF complex subunit SWI3C-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477016 PE=4 SV=1)

HSP 1 Score: 1045.0 bits (2701), Expect = 1.2e-301
Identity = 520/582 (89.35%), Postives = 550/582 (94.50%), Query Frame = 0


Query: 1   MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMER 60
           MP SPSFPSGSRGKWRKKKRDSQIGRRNN+ N+ NNG+N+H++DDEDEDL AAEN+EMER
Sbjct: 1   MPASPSFPSGSRGKWRKKKRDSQIGRRNNFPNSNNNGSNKHEEDDEDEDLAAAENEEMER 60

Query: 61  DNNDDSEDPQIGLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAMER 120
           DNNDDSEDPQI L   PNS++QE ELLSDDK+RVSEFPQVVKRAVTRPHSSVLAVVAMER
Sbjct: 61  DNNDDSEDPQINLQSAPNSSLQEPELLSDDKVRVSEFPQVVKRAVTRPHSSVLAVVAMER 120

Query: 121 TNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME 180
            NQ+GESKG+PGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME
Sbjct: 121 ANQFGESKGLPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME 180

Query: 181 GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA 240
           GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGK PDRTPEKYMEIRNFVVA
Sbjct: 181 GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKFPDRTPEKYMEIRNFVVA 240

Query: 241 KYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE 300
           KYMENP+KRVTVSD +GL+DGVSNEDLTRIVRFLDHWGIINYCAP PSCEPWNS+SYLRE
Sbjct: 241 KYMENPQKRVTVSDFQGLIDGVSNEDLTRIVRFLDHWGIINYCAPAPSCEPWNSSSYLRE 300

Query: 301 DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAE 360
           DMNGEIHVPSAALKPIDSL+KFDKPKCRLKA +VYS LPC DD D LCDLDN+IRERLAE
Sbjct: 301 DMNGEIHVPSAALKPIDSLIKFDKPKCRLKANEVYSILPCHDDNDDLCDLDNKIRERLAE 360

Query: 361 NHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSEN 420
           N+CSSCSR VP+AYYQSQKEVDVLLCSDCF+EGKYVAGH+SIDFLRVDM KDY ELDSEN
Sbjct: 361 NYCSSCSRPVPIAYYQSQKEVDVLLCSDCFYEGKYVAGHASIDFLRVDMTKDYDELDSEN 420

Query: 421 WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS 480
           WTDQETLLLLEAIELYN+NWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS
Sbjct: 421 WTDQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS 480

Query: 481 SNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVA 540
           SN+SHG D+EKS SNMNGNVAGSS+QDNKEM DRLPFANS NPVMALVAFLASA+GPRVA
Sbjct: 481 SNSSHGEDNEKSHSNMNGNVAGSSSQDNKEMRDRLPFANSQNPVMALVAFLASAVGPRVA 540

Query: 541 ASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQAR 583
           ASCAHASLAALSEDS+ASSGSIF  EGS+NANR NVD    R
Sbjct: 541 ASCAHASLAALSEDSLASSGSIFQREGSLNANRTNVDFTHGR 582

[Close]

BLAST of IVF0018462 vs. ExPASy TrEMBL
Match: A0A6J1BY34 (SWI/SNF complex subunit SWI3C OS=Momordica charantia OX=3673 GN=LOC111006632 PE=4 SV=1)

HSP 1 Score: 1041.6 bits (2692), Expect = 1.4e-300
Identity = 521/582 (89.52%), Postives = 549/582 (94.33%), Query Frame = 0


Query: 1   MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMER 60
           MP SPSFPSGSRGKWRKKKR+ QIGRR+NY N  NNG+N+H+D+DEDEDL AAEN++MER
Sbjct: 1   MPASPSFPSGSRGKWRKKKREPQIGRRHNYGNNSNNGSNKHEDEDEDEDLAAAENEDMER 60

Query: 61  DNNDDSEDPQIGLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAMER 120
           DN DDSEDPQ    PTPNS++QETELLSDD +RVS+FPQVVKR VTRPHSSV A+VAMER
Sbjct: 61  DNIDDSEDPQNNSQPTPNSSLQETELLSDDGVRVSDFPQVVKRGVTRPHSSVWAIVAMER 120

Query: 121 TNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME 180
            NQYGESKG+PGN LILENVSYGQLQALSA+PADSPALLDQER EAGNAAYVITPPPIME
Sbjct: 121 ANQYGESKGLPGNPLILENVSYGQLQALSALPADSPALLDQERAEAGNAAYVITPPPIME 180

Query: 181 GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA 240
           GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA
Sbjct: 181 GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA 240

Query: 241 KYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE 300
           KYMENPEKRVTVSDC+GLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE
Sbjct: 241 KYMENPEKRVTVSDCQGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE 300

Query: 301 DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAE 360
           DMNGEIHVPSAALKPIDSL+KFDKPKCRLKAADVYSAL C D  DGL DLDNRIRERLAE
Sbjct: 301 DMNGEIHVPSAALKPIDSLIKFDKPKCRLKAADVYSALSCHDKNDGLSDLDNRIRERLAE 360

Query: 361 NHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSEN 420
           NHCS CS+SVP+AYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLR+DM+KDYGELDSEN
Sbjct: 361 NHCSCCSQSVPIAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRMDMSKDYGELDSEN 420

Query: 421 WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS 480
           WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS
Sbjct: 421 WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS 480

Query: 481 SNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVA 540
           SN+SHG D+EKS SNMNGNVAGSS+QD KEM+DRLPFANSGNPVMALVAFLASAIGPRVA
Sbjct: 481 SNSSHGEDNEKSHSNMNGNVAGSSSQD-KEMYDRLPFANSGNPVMALVAFLASAIGPRVA 540

Query: 541 ASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQAR 583
           ASCAHASLAALSEDSVA+SGSIF  EGS NANR NV++   R
Sbjct: 541 ASCAHASLAALSEDSVAASGSIFQTEGSGNANRPNVESTHGR 581

[Close]

BLAST of IVF0018462 vs. NCBI nr
Match: XP_008444192.1 (PREDICTED: SWI/SNF complex subunit SWI3C [Cucumis melo] >TYK30001.1 SWI/SNF complex subunit SWI3C [Cucumis melo var. makuwa])

HSP 1 Score: 1154 bits (2984), Expect = 0.0
Identity = 582/582 (100.00%), Postives = 582/582 (100.00%), Query Frame = 0


Query: 1   MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMER 60
           MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMER
Sbjct: 1   MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMER 60

Query: 61  DNNDDSEDPQIGLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAMER 120
           DNNDDSEDPQIGLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAMER
Sbjct: 61  DNNDDSEDPQIGLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAMER 120

Query: 121 TNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME 180
           TNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME
Sbjct: 121 TNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME 180

Query: 181 GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA 240
           GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA
Sbjct: 181 GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA 240

Query: 241 KYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE 300
           KYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE
Sbjct: 241 KYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE 300

Query: 301 DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAE 360
           DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAE
Sbjct: 301 DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAE 360

Query: 361 NHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSEN 420
           NHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSEN
Sbjct: 361 NHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSEN 420

Query: 421 WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS 480
           WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS
Sbjct: 421 WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS 480

Query: 481 SNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVA 540
           SNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVA
Sbjct: 481 SNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVA 540

Query: 541 ASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQAR 582
           ASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQAR
Sbjct: 541 ASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQAR 582

[Close]

BLAST of IVF0018462 vs. NCBI nr
Match: XP_004142633.1 (SWI/SNF complex subunit SWI3C [Cucumis sativus] >KGN54546.1 hypothetical protein Csa_012987 [Cucumis sativus])

HSP 1 Score: 1142 bits (2954), Expect = 0.0
Identity = 573/582 (98.45%), Postives = 580/582 (99.66%), Query Frame = 0


Query: 1   MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMER 60
           MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNT+NNGTNRHDDDDEDEDLVAAENDEMER
Sbjct: 1   MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTFNNGTNRHDDDDEDEDLVAAENDEMER 60

Query: 61  DNNDDSEDPQIGLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAMER 120
           DNNDDSEDPQIGLHPTPNSTIQE ELLSDDK RVSEFPQVVKRAVTRPHSSVLAVVAMER
Sbjct: 61  DNNDDSEDPQIGLHPTPNSTIQEPELLSDDKFRVSEFPQVVKRAVTRPHSSVLAVVAMER 120

Query: 121 TNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME 180
           TNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME
Sbjct: 121 TNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME 180

Query: 181 GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA 240
           GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA
Sbjct: 181 GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA 240

Query: 241 KYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE 300
           KYMENPEKRVTVSDC+GLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE
Sbjct: 241 KYMENPEKRVTVSDCQGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE 300

Query: 301 DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAE 360
           DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAE
Sbjct: 301 DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAE 360

Query: 361 NHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSEN 420
           NHCSSCSRSVP+AYYQSQKEVDVLLCSDCFHEGKYVAGHSS+DFLRVDMAKDYGELDSEN
Sbjct: 361 NHCSSCSRSVPIAYYQSQKEVDVLLCSDCFHEGKYVAGHSSVDFLRVDMAKDYGELDSEN 420

Query: 421 WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS 480
           WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS
Sbjct: 421 WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS 480

Query: 481 SNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVA 540
           S+ASHGGDSEKSRSNMNGN+AGSS+QDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVA
Sbjct: 481 SSASHGGDSEKSRSNMNGNIAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVA 540

Query: 541 ASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQAR 582
           ASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQAR
Sbjct: 541 ASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQAR 582

[Close]

BLAST of IVF0018462 vs. NCBI nr
Match: XP_038897629.1 (SWI/SNF complex subunit SWI3C [Benincasa hispida])

HSP 1 Score: 1081 bits (2796), Expect = 0.0
Identity = 548/582 (94.16%), Postives = 563/582 (96.74%), Query Frame = 0


Query: 1   MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMER 60
           MPPSPSFPSGSRGKWRKKKRDSQIGRRNNY++   NGTNRHDDDDEDEDLVAAEN+EMER
Sbjct: 1   MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYNS---NGTNRHDDDDEDEDLVAAENEEMER 60

Query: 61  DNNDDSEDPQIGLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAMER 120
           DNNDDSEDPQI LHP PNS IQETELLSDDK+RVSEFPQVVKRAVTRPHSSV+AVVAMER
Sbjct: 61  DNNDDSEDPQISLHPAPNSAIQETELLSDDKVRVSEFPQVVKRAVTRPHSSVMAVVAMER 120

Query: 121 TNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME 180
           TNQYGESKG+PGNSLILENVSYGQLQALSAMPADSPALLDQER EAGNAAYV+TPPPIME
Sbjct: 121 TNQYGESKGMPGNSLILENVSYGQLQALSAMPADSPALLDQERAEAGNAAYVVTPPPIME 180

Query: 181 GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA 240
           GRGVVK FGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA
Sbjct: 181 GRGVVKTFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA 240

Query: 241 KYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE 300
           KYMENPEKRVTVSDC+GLVDGVSN+DLTRIVRFLDHWGIINYCAPTPSCE WNS+SYLRE
Sbjct: 241 KYMENPEKRVTVSDCQGLVDGVSNDDLTRIVRFLDHWGIINYCAPTPSCEAWNSSSYLRE 300

Query: 301 DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAE 360
           DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPC DDIDGL DLDNRIRERLAE
Sbjct: 301 DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCHDDIDGLSDLDNRIRERLAE 360

Query: 361 NHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSEN 420
           NHCSSCS SVP+AYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDY ELDSEN
Sbjct: 361 NHCSSCSLSVPIAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDY-ELDSEN 420

Query: 421 WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS 480
           WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS
Sbjct: 421 WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS 480

Query: 481 SNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVA 540
           SN+SHG D EKSRSNMNGN+AGSS+QDNKE+HDRLPFANSGNPVMALVAFLASAIGPRVA
Sbjct: 481 SNSSHGEDKEKSRSNMNGNMAGSSSQDNKEIHDRLPFANSGNPVMALVAFLASAIGPRVA 540

Query: 541 ASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQAR 582
           ASCAHASLAALSEDSVASSGSIF MEGSVNANR NVD KQ R
Sbjct: 541 ASCAHASLAALSEDSVASSGSIFQMEGSVNANRTNVDVKQIR 578

[Close]

BLAST of IVF0018462 vs. NCBI nr
Match: XP_022976707.1 (SWI/SNF complex subunit SWI3C-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1038 bits (2684), Expect = 0.0
Identity = 520/582 (89.35%), Postives = 550/582 (94.50%), Query Frame = 0


Query: 1   MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMER 60
           MP SPSFPSGSRGKWRKKKRDSQIGRRNN+ N+ NNG+N+H++DDEDEDL AAEN+EMER
Sbjct: 1   MPASPSFPSGSRGKWRKKKRDSQIGRRNNFPNSNNNGSNKHEEDDEDEDLAAAENEEMER 60

Query: 61  DNNDDSEDPQIGLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAMER 120
           DNNDDSEDPQI L   PNS++QE ELLSDDK+RVSEFPQVVKRAVTRPHSSVLAVVAMER
Sbjct: 61  DNNDDSEDPQINLQSAPNSSLQEPELLSDDKVRVSEFPQVVKRAVTRPHSSVLAVVAMER 120

Query: 121 TNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME 180
            NQ+GESKG+PGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME
Sbjct: 121 ANQFGESKGLPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME 180

Query: 181 GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA 240
           GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGK PDRTPEKYMEIRNFVVA
Sbjct: 181 GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKFPDRTPEKYMEIRNFVVA 240

Query: 241 KYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE 300
           KYMENP+KRVTVSD +GL+DGVSNEDLTRIVRFLDHWGIINYCAP PSCEPWNS+SYLRE
Sbjct: 241 KYMENPQKRVTVSDFQGLIDGVSNEDLTRIVRFLDHWGIINYCAPAPSCEPWNSSSYLRE 300

Query: 301 DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAE 360
           DMNGEIHVPSAALKPIDSL+KFDKPKCRLKA +VYS LPC DD D LCDLDN+IRERLAE
Sbjct: 301 DMNGEIHVPSAALKPIDSLIKFDKPKCRLKANEVYSILPCHDDNDDLCDLDNKIRERLAE 360

Query: 361 NHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSEN 420
           N+CSSCSR VP+AYYQSQKEVDVLLCSDCF+EGKYVAGH+SIDFLRVDM KDY ELDSEN
Sbjct: 361 NYCSSCSRPVPIAYYQSQKEVDVLLCSDCFYEGKYVAGHASIDFLRVDMTKDYDELDSEN 420

Query: 421 WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS 480
           WTDQETLLLLEAIELYN+NWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS
Sbjct: 421 WTDQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS 480

Query: 481 SNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVA 540
           SN+SHG D+EKS SNMNGNVAGSS+QDNKEM DRLPFANS NPVMALVAFLASA+GPRVA
Sbjct: 481 SNSSHGEDNEKSHSNMNGNVAGSSSQDNKEMRDRLPFANSQNPVMALVAFLASAVGPRVA 540

Query: 541 ASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQAR 582
           ASCAHASLAALSEDS+ASSGSIF  EGS+NANR NVD    R
Sbjct: 541 ASCAHASLAALSEDSLASSGSIFQREGSLNANRTNVDFTHGR 582

[Close]

BLAST of IVF0018462 vs. NCBI nr
Match: XP_023535717.1 (SWI/SNF complex subunit SWI3C-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1038 bits (2683), Expect = 0.0
Identity = 520/582 (89.35%), Postives = 549/582 (94.33%), Query Frame = 0


Query: 1   MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMER 60
           MP SPSFPSGSRGKWRKKKRDSQIGRRNN+ N+ NNG+N+H+++DEDEDL AAEN+EMER
Sbjct: 1   MPASPSFPSGSRGKWRKKKRDSQIGRRNNFPNSNNNGSNKHEEEDEDEDLAAAENEEMER 60

Query: 61  DNNDDSEDPQIGLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAMER 120
           DNNDDSEDPQI L   PNS++QE ELLSDDK+RVSEFPQVVKR VTRPHSSVLAVVAMER
Sbjct: 61  DNNDDSEDPQINLQSAPNSSLQEPELLSDDKVRVSEFPQVVKRVVTRPHSSVLAVVAMER 120

Query: 121 TNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME 180
            NQ+GESKG+PGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME
Sbjct: 121 ANQFGESKGLPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME 180

Query: 181 GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA 240
           GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGK PDRTPEKYMEIRNFVVA
Sbjct: 181 GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKFPDRTPEKYMEIRNFVVA 240

Query: 241 KYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLRE 300
           KYMENPEKRVTVSD +GL+DGVSNEDLTRIVRFLDHWGIINYCAP PSCEPWNS+SYLRE
Sbjct: 241 KYMENPEKRVTVSDFQGLIDGVSNEDLTRIVRFLDHWGIINYCAPAPSCEPWNSSSYLRE 300

Query: 301 DMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAE 360
           DMNGEIHVPSAALKPIDSL+KFDKPKCRLKA +VYS LPC DD D LCDLDN+IRERLAE
Sbjct: 301 DMNGEIHVPSAALKPIDSLIKFDKPKCRLKANEVYSILPCHDDHDDLCDLDNKIRERLAE 360

Query: 361 NHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSEN 420
           N+CSSCSR VP+AYYQSQKEVDVLLCSDCF+EGKYVAGH+SIDFLRVDM KDY ELDSEN
Sbjct: 361 NYCSSCSRPVPIAYYQSQKEVDVLLCSDCFYEGKYVAGHASIDFLRVDMTKDYDELDSEN 420

Query: 421 WTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS 480
           WTDQETLLLLEAIELYN+NWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS
Sbjct: 421 WTDQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLS 480

Query: 481 SNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVA 540
           SN+SHG D++KS SNMNGNVAGSS+QDNKEM DRLPFANS NPVMALVAFLASA+GPRVA
Sbjct: 481 SNSSHGEDNQKSHSNMNGNVAGSSSQDNKEMRDRLPFANSQNPVMALVAFLASAVGPRVA 540

Query: 541 ASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQAR 582
           ASCAHASLAALSEDSVASSGSIF  EGSVNANR NVD    R
Sbjct: 541 ASCAHASLAALSEDSVASSGSIFQREGSVNANRTNVDIAHGR 582

[Close]

BLAST of IVF0018462 vs. TAIR 10
Match: AT1G21700.1 (SWITCH/sucrose nonfermenting 3C )

HSP 1 Score: 590.9 bits (1522), Expect = 1.2e-168
Identity = 316/559 (56.53%), Postives = 397/559 (71.02%), Query Frame = 0


Query: 12  RGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMERDNNDDSEDPQI 71
           RGKW++KKR      R            + ++D E+ED     N+  E D+ +++++ Q 
Sbjct: 8   RGKWKRKKRGGLSAARK---------PKQEEEDMEEEDEENNNNNNEEMDDVENADELQQ 67

Query: 72  GLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAMERTNQYGESKGVP 131
               TP+  +   E++ D   R+S+FP VVKR V RPH+SV+AVVA ER    GE++G  
Sbjct: 68  NGGATPDPGLGIGEVVEDSGSRISDFPAVVKRVVIRPHASVMAVVAAERAGLIGETRG-Q 127

Query: 132 GNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIMEGRGVVKRFGSR 191
           G+   LEN+S+GQLQALS +PADS   LD ER +  ++AYVI+PPPIM+G GVVKRFG  
Sbjct: 128 GSLPALENISFGQLQALSTVPADS---LDLERSDGSSSAYVISPPPIMDGEGVVKRFGDL 187

Query: 192 VHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEKRVT 251
           VHV+PMHSDWF+P TV RLERQVVP FFSGK P+ TPE YME RN +V+KY+ENPEK +T
Sbjct: 188 VHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKTLT 247

Query: 252 VSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCE-PWNSNSYLREDMNGEIHVPS 311
           +SDC+GLVDGV  ED  R+ RFLDHWGIINYCA   S   P    S +RED NGE++VPS
Sbjct: 248 ISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTNGEVNVPS 307

Query: 312 AALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRERLAENHCSSCSRSV 371
           AAL  IDSL+KFDKP CR K  +VYS+LP  D      DLD RIRE L ++HC+ CSR +
Sbjct: 308 AALTSIDSLIKFDKPNCRHKGGEVYSSLPSLDGDSP--DLDIRIREHLCDSHCNHCSRPL 367

Query: 372 PVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSENWTDQETLLLL 431
           P  Y+QSQK+ D+LLC DCFH G++V GHS +DF+RVD  K YG+ D +NWTDQETLLLL
Sbjct: 368 PTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGDNWTDQETLLLL 427

Query: 432 EAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGVSLSSNASHGGDSE 491
           EA+ELYNENW +I +HVGSKSKAQCI+HFLRL VEDGLL+NV+V GV+ + N ++G D +
Sbjct: 428 EAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLDNVEVSGVTNTENPTNGYDHK 487

Query: 492 KSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVAASCAHASLAA 551
            + S  NG++ G S Q   +   +LPF  S NPVMALVAFLASA+GPRVAASCAH SL+ 
Sbjct: 488 GTDS--NGDLPGYSEQ-GSDTEIKLPFVKSPNPVMALVAFLASAVGPRVAASCAHESLSV 547

Query: 552 LSEDSVASSGSIFHMEGSV 570
           LSED    S  +   E S+
Sbjct: 548 LSEDDRMKSEGMQGKEASL 548

[Close]

BLAST of IVF0018462 vs. TAIR 10
Match: AT4G34430.1 (DNA-binding family protein )

HSP 1 Score: 191.0 bits (484), Expect = 2.8e-48
Identity = 139/444 (31.31%), Postives = 202/444 (45.50%), Query Frame = 0


Query: 190 SRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEKR 249
           S VHVVP H  WFS   +H LE + +P FF+GKL  RT E Y EIRN+++ K+  NP  +
Sbjct: 142 SNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQ 201

Query: 250 VTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLREDMNGEIHVP 309
           + + D   L  G  +E    ++ FLD+WG+IN+  P P  +  ++ S   +  + E  + 
Sbjct: 202 IELKDLTELEVG-DSEAKQEVMEFLDYWGLINF-HPFPPTDTGSTASDHDDLGDKESLLN 261

Query: 310 SAALKPIDSLVKFDKPKCRLKAADVYSAL-PCRDDIDGLCDLDNRIRERLAENHCSSCSR 369
           S     +D        K R  A    S L P     D L   +        E HC+SCS 
Sbjct: 262 SLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEG----PAVEYHCNSCSA 321

Query: 370 SVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSENWTDQETLL 429
                 Y   K+ D  LC++CF+ GK+ +  SS DF+ ++ A+  G + S  WTDQETLL
Sbjct: 322 DCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPG-VGSGKWTDQETLL 381

Query: 430 LLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVP----------GVS 489
           LLEA+E++ ENWNEI EHV +K+KAQC++HFL++ +ED  L+ +D             VS
Sbjct: 382 LLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKDPISKDTTDLAVS 441

Query: 490 LSSNA------------------------SHGGDSEKSRSNMNGNVAGSSTQDNKEM--- 549
              N+                            D  + + +   +  G ++++  EM   
Sbjct: 442 KDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGNEEKVSQESSKPGDASEETNEMEAE 501

Query: 550 -----------------------------------HDRLP-----FANSGNPVMALVAFL 556
                                              H   P     FA+ GNPVM L AFL
Sbjct: 502 QKTPKLETAIEERCKDEADENIALKALTEAFEDVGHSSTPEASFSFADLGNPVMGLAAFL 561

[Close]

BLAST of IVF0018462 vs. TAIR 10
Match: AT4G34430.4 (DNA-binding family protein )

HSP 1 Score: 191.0 bits (484), Expect = 2.8e-48
Identity = 139/444 (31.31%), Postives = 202/444 (45.50%), Query Frame = 0


Query: 190 SRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEKR 249
           S VHVVP H  WFS   +H LE + +P FF+GKL  RT E Y EIRN+++ K+  NP  +
Sbjct: 142 SNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQ 201

Query: 250 VTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLREDMNGEIHVP 309
           + + D   L  G  +E    ++ FLD+WG+IN+  P P  +  ++ S   +  + E  + 
Sbjct: 202 IELKDLTELEVG-DSEAKQEVMEFLDYWGLINF-HPFPPTDTGSTASDHDDLGDKESLLN 261

Query: 310 SAALKPIDSLVKFDKPKCRLKAADVYSAL-PCRDDIDGLCDLDNRIRERLAENHCSSCSR 369
           S     +D        K R  A    S L P     D L   +        E HC+SCS 
Sbjct: 262 SLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEG----PAVEYHCNSCSA 321

Query: 370 SVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSENWTDQETLL 429
                 Y   K+ D  LC++CF+ GK+ +  SS DF+ ++ A+  G + S  WTDQETLL
Sbjct: 322 DCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPG-VGSGKWTDQETLL 381

Query: 430 LLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVP----------GVS 489
           LLEA+E++ ENWNEI EHV +K+KAQC++HFL++ +ED  L+ +D             VS
Sbjct: 382 LLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKDPISKDTTDLAVS 441

Query: 490 LSSNA------------------------SHGGDSEKSRSNMNGNVAGSSTQDNKEM--- 549
              N+                            D  + + +   +  G ++++  EM   
Sbjct: 442 KDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGNEEKVSQESSKPGDASEETNEMEAE 501

Query: 550 -----------------------------------HDRLP-----FANSGNPVMALVAFL 556
                                              H   P     FA+ GNPVM L AFL
Sbjct: 502 QKTPKLETAIEERCKDEADENIALKALTEAFEDVGHSSTPEASFSFADLGNPVMGLAAFL 561

[Close]

BLAST of IVF0018462 vs. TAIR 10
Match: AT4G34430.3 (DNA-binding family protein )

HSP 1 Score: 191.0 bits (484), Expect = 2.8e-48
Identity = 139/444 (31.31%), Postives = 202/444 (45.50%), Query Frame = 0


Query: 190 SRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEKR 249
           S VHVVP H  WFS   +H LE + +P FF+GKL  RT E Y EIRN+++ K+  NP  +
Sbjct: 142 SNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQ 201

Query: 250 VTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLREDMNGEIHVP 309
           + + D   L  G  +E    ++ FLD+WG+IN+  P P  +  ++ S   +  + E  + 
Sbjct: 202 IELKDLTELEVG-DSEAKQEVMEFLDYWGLINF-HPFPPTDTGSTASDHDDLGDKESLLN 261

Query: 310 SAALKPIDSLVKFDKPKCRLKAADVYSAL-PCRDDIDGLCDLDNRIRERLAENHCSSCSR 369
           S     +D        K R  A    S L P     D L   +        E HC+SCS 
Sbjct: 262 SLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEG----PAVEYHCNSCSA 321

Query: 370 SVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSENWTDQETLL 429
                 Y   K+ D  LC++CF+ GK+ +  SS DF+ ++ A+  G + S  WTDQETLL
Sbjct: 322 DCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPG-VGSGKWTDQETLL 381

Query: 430 LLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVP----------GVS 489
           LLEA+E++ ENWNEI EHV +K+KAQC++HFL++ +ED  L+ +D             VS
Sbjct: 382 LLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKDPISKDTTDLAVS 441

Query: 490 LSSNA------------------------SHGGDSEKSRSNMNGNVAGSSTQDNKEM--- 549
              N+                            D  + + +   +  G ++++  EM   
Sbjct: 442 KDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGNEEKVSQESSKPGDASEETNEMEAE 501

Query: 550 -----------------------------------HDRLP-----FANSGNPVMALVAFL 556
                                              H   P     FA+ GNPVM L AFL
Sbjct: 502 QKTPKLETAIEERCKDEADENIALKALTEAFEDVGHSSTPEASFSFADLGNPVMGLAAFL 561

[Close]

BLAST of IVF0018462 vs. TAIR 10
Match: AT4G34430.2 (DNA-binding family protein )

HSP 1 Score: 191.0 bits (484), Expect = 2.8e-48
Identity = 139/444 (31.31%), Postives = 202/444 (45.50%), Query Frame = 0


Query: 190 SRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEKR 249
           S VHVVP H  WFS   +H LE + +P FF+GKL  RT E Y EIRN+++ K+  NP  +
Sbjct: 142 SNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQ 201

Query: 250 VTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLREDMNGEIHVP 309
           + + D   L  G  +E    ++ FLD+WG+IN+  P P  +  ++ S   +  + E  + 
Sbjct: 202 IELKDLTELEVG-DSEAKQEVMEFLDYWGLINF-HPFPPTDTGSTASDHDDLGDKESLLN 261

Query: 310 SAALKPIDSLVKFDKPKCRLKAADVYSAL-PCRDDIDGLCDLDNRIRERLAENHCSSCSR 369
           S     +D        K R  A    S L P     D L   +        E HC+SCS 
Sbjct: 262 SLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEG----PAVEYHCNSCSA 321

Query: 370 SVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELDSENWTDQETLL 429
                 Y   K+ D  LC++CF+ GK+ +  SS DF+ ++ A+  G + S  WTDQETLL
Sbjct: 322 DCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPG-VGSGKWTDQETLL 381

Query: 430 LLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVP----------GVS 489
           LLEA+E++ ENWNEI EHV +K+KAQC++HFL++ +ED  L+ +D             VS
Sbjct: 382 LLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKDPISKDTTDLAVS 441

Query: 490 LSSNA------------------------SHGGDSEKSRSNMNGNVAGSSTQDNKEM--- 549
              N+                            D  + + +   +  G ++++  EM   
Sbjct: 442 KDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGNEEKVSQESSKPGDASEETNEMEAE 501

Query: 550 -----------------------------------HDRLP-----FANSGNPVMALVAFL 556
                                              H   P     FA+ GNPVM L AFL
Sbjct: 502 QKTPKLETAIEERCKDEADENIALKALTEAFEDVGHSSTPEASFSFADLGNPVMGLAAFL 561

The following BLAST results are available for this feature:

BLAST of IVF0018462 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI07	1.7e-167	56.53	SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana OX=3702 GN=SWI3C PE=1 SV=1	[more]
Q53KK6	6.2e-133	48.75	SWI/SNF complex subunit SWI3C homolog OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q8VY05	4.0e-47	31.31	SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana OX=3702 GN=SWI3D PE=1 SV=3	[more]
Q92922	3.2e-36	29.83	SWI/SNF complex subunit SMARCC1 OS=Homo sapiens OX=9606 GN=SMARCC1 PE=1 SV=3	[more]
P97496	4.1e-36	29.56	SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1 PE=1 SV=2	[more]

BLAST of IVF0018462 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E339	0.0e+00	99.83	SWI/SNF complex subunit SWI3C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3B9W1	0.0e+00	99.83	SWI/SNF complex subunit SWI3C OS=Cucumis melo OX=3656 GN=LOC103487606 PE=4 SV=1	[more]
A0A0A0L361	0.0e+00	98.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361800 PE=4 SV=1	[more]
A0A6J1IGH8	1.2e-301	89.35	SWI/SNF complex subunit SWI3C-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1BY34	1.4e-300	89.52	SWI/SNF complex subunit SWI3C OS=Momordica charantia OX=3673 GN=LOC111006632 PE=...	[more]

BLAST of IVF0018462 vs. NCBI nr


Match Name	Identity	Description
XP_008444192.1	100.00	PREDICTED: SWI/SNF complex subunit SWI3C [Cucumis melo] >TYK30001.1 SWI/SNF comp...	[more]
XP_004142633.1	98.45	SWI/SNF complex subunit SWI3C [Cucumis sativus] >KGN54546.1 hypothetical protein...	[more]
XP_038897629.1	94.16	SWI/SNF complex subunit SWI3C [Benincasa hispida]	[more]
XP_022976707.1	89.35	SWI/SNF complex subunit SWI3C-like isoform X1 [Cucurbita maxima]	[more]
XP_023535717.1	89.35	SWI/SNF complex subunit SWI3C-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0018462 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21700.1	1.2e-168	56.53	SWITCH/sucrose nonfermenting 3C	[more]
AT4G34430.1	2.8e-48	31.31	DNA-binding family protein	[more]
AT4G34430.4	2.8e-48	31.31	DNA-binding family protein	[more]
AT4G34430.3	2.8e-48	31.31	DNA-binding family protein	[more]
AT4G34430.2	2.8e-48	31.31	DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 417..465 e-value: 9.8E-9 score: 45.0
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 413..463 score: 6.957235
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 420..462 e-value: 2.31203E-8 score: 48.3406
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 419..461 e-value: 1.4E-10 score: 41.2
None	No IPR available	GENE3D	1.10.10.60		coord: 417..467 e-value: 4.9E-16 score: 60.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 480..508
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 480..506
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..64
None	No IPR available	PANTHER	PTHR12802	SWI/SNF COMPLEX-RELATED	coord: 74..597
None	No IPR available	PANTHER	PTHR12802:SF61	SWI/SNF COMPLEX SUBUNIT SWI3C	coord: 74..597
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 199..286 e-value: 6.4E-27 score: 95.3
IPR007526	SWIRM domain	PFAM	PF04433	SWIRM	coord: 196..282 e-value: 5.1E-23 score: 81.2
IPR007526	SWIRM domain	PROSITE	PS50934	SWIRM	coord: 193..291 score: 20.01062
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 416..467 score: 19.751963
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 418..467
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 192..290

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0018462.1	IVF0018462.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0043229	intracellular organelle
molecular_function	GO:0005515	protein binding