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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTCTATTAAGGGGTGCTGTTTGATTAAAGGTACCATCCCCAGTAGTCCAACCATTGCTTTCGTTCATCCATGGGCAATAGAGAAGTCTGACTCAAAGGACTGTGCCGGGGCCTTTGATCTTTCTCTTAGATCTCGTGCACCGCTACATGGCTTTCTTCCTCTTGATCGTAAACATGGTCGAGCCTATATCTAA mRNA sequence ATGTCTATTAAGGGGTGCTGTTTGATTAAAGGTACCATCCCCAGTAGTCCAACCATTGCTTTCGTTCATCCATGGGCAATAGAGAAGTCTGACTCAAAGGACTGTGCCGGGGCCTTTGATCTTTCTCTTAGATCTCGTGCACCGCTACATGGCTTTCTTCCTCTTGATCGTAAACATGGTCGAGCCTATATCTAA Coding sequence (CDS) ATGTCTATTAAGGGGTGCTGTTTGATTAAAGGTACCATCCCCAGTAGTCCAACCATTGCTTTCGTTCATCCATGGGCAATAGAGAAGTCTGACTCAAAGGACTGTGCCGGGGCCTTTGATCTTTCTCTTAGATCTCGTGCACCGCTACATGGCTTTCTTCCTCTTGATCGTAAACATGGTCGAGCCTATATCTAA Protein sequence MSIKGCCLIKGTIPSSPTIAFVHPWAIEKSDSKDCAGAFDLSLRSRAPLHGFLPLDRKHGRAYI
Homology
BLAST of IVF0018397 vs. ExPASy TrEMBL
Match: A0A5D3CJK9 (Centromere protein V isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold807G00190 PE=3 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 4.7e-23 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0 Query: 12 TIPSSPTIAFVHPWAIEKSDSKDCAGAFDLSLRSRAPLHGFLPLDRKHGRAYI 65 TIPSSPTIAFVHPWAIEKSDSKDCAGAFDLSLRSRAPLHGFLPLDRKHGRAYI Sbjct: 139 TIPSSPTIAFVHPWAIEKSDSKDCAGAFDLSLRSRAPLHGFLPLDRKHGRAYI 191
BLAST of IVF0018397 vs. ExPASy TrEMBL
Match: A0A1S4E5L6 (centromere protein V isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 4.7e-23 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0 Query: 12 TIPSSPTIAFVHPWAIEKSDSKDCAGAFDLSLRSRAPLHGFLPLDRKHGRAYI 65 TIPSSPTIAFVHPWAIEKSDSKDCAGAFDLSLRSRAPLHGFLPLDRKHGRAYI Sbjct: 139 TIPSSPTIAFVHPWAIEKSDSKDCAGAFDLSLRSRAPLHGFLPLDRKHGRAYI 191
BLAST of IVF0018397 vs. NCBI nr
Match: XP_016903270.1 (PREDICTED: centromere protein V isoform X1 [Cucumis melo] >KAA0045397.1 centromere protein V isoform X1 [Cucumis melo var. makuwa] >TYK11344.1 centromere protein V isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 115 bits (287), Expect = 2.15e-30 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0 Query: 12 TIPSSPTIAFVHPWAIEKSDSKDCAGAFDLSLRSRAPLHGFLPLDRKHGRAYI 64 TIPSSPTIAFVHPWAIEKSDSKDCAGAFDLSLRSRAPLHGFLPLDRKHGRAYI Sbjct: 139 TIPSSPTIAFVHPWAIEKSDSKDCAGAFDLSLRSRAPLHGFLPLDRKHGRAYI 191
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3CJK9 | 4.7e-23 | 100.00 | Centromere protein V isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
A0A1S4E5L6 | 4.7e-23 | 100.00 | centromere protein V isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=... | [more] |
Match Name | E-value | Identity | Description | |
XP_016903270.1 | 2.15e-30 | 100.00 | PREDICTED: centromere protein V isoform X1 [Cucumis melo] >KAA0045397.1 centrome... | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
molecular_function |
GO:0016846 |
carbon-sulfur lyase activity |
molecular_function |
GO:0046872 |
metal ion binding |
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