IVF0018269 (gene) Melon (IVF77) v1

Overview


Name	IVF0018269
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	C2H2-type domain-containing protein
Location	chr06: 15170362 .. 15170850 (-)
RNA-Seq Expression	IVF0018269
Synteny	IVF0018269

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGACCCAACCATTTACGACTTCCTTAGCCAAACAACAACAGCAGCTCCTTCAAATAATTCAACAACAACAGCAACAGTACTACCCAAAGCTGCTTCTTCAAGAAAATCACATTCTCAATCTCGCATTTTCCCATGTCTTTACTGCCCTCGCAAATTTTACACTTCTCAAGCCCTAGGCGGACACCAAAATGCACACAAGAGAGAAAGAGCCGCTGCCTCTCGTAAGGCGGCCGCCCTCACTACCTCTGAAATTCTTCATCTCGGTTGTTCCTCCCTTCAACACTCTCCTCCCCCACCCCCACCAACCATCACTACTACTCACCATCATCATCATCTCCCACCCCACTTCTATCCCTTCCCACTCCAGTACCTTCTTTTCTCGACCACCACCATTCCTTTCATCACAATAATTTCTGTACTAACACCTCTGCCTCCCCCGATGCTCTCTCTCCCACCAACACTGACCCCGCACTTGAACATCTAA

mRNA sequence

ATGGCAGACCCAACCATTTACGACTTCCTTAGCCAAACAACAACAGCAGCTCCTTCAAATAATTCAACAACAACAGCAACAGTACTACCCAAAGCTGCTTCTTCAAGAAAATCACATTCTCAATCTCGCATTTTCCCATGTCTTTACTGCCCTCGCAAATTTTACACTTCTCAAGCCCTAGGCGGACACCAAAATGCACACAAGAGAGAAAGAGCCGCTGCCTCTCGTAAGGCGGCCGCCCTCACTACCTCTGAAATTCTTCATCTCGGTTGTTCCTCCCTTCAACACTCTCCTCCCCCACCCCCACCAACCATCACTACTACTCACCATCATCATCATCTCCCACCCCACTTCTATCCCTTCCCACTCCAGTACCTTCTTTTCTCGACCACCACCATTCCTTTCATCACAATAATTTCTGTACTAACACCTCTGCCTCCCCCGATGCTCTCTCTCCCACCAACACTGACCCCGCACTTGAACATCTAA

Coding sequence (CDS)

ATGGCAGACCCAACCATTTACGACTTCCTTAGCCAAACAACAACAGCAGCTCCTTCAAATAATTCAACAACAACAGCAACAGTACTACCCAAAGCTGCTTCTTCAAGAAAATCACATTCTCAATCTCGCATTTTCCCATGTCTTTACTGCCCTCGCAAATTTTACACTTCTCAAGCCCTAGGCGGACACCAAAATGCACACAAGAGAGAAAGAGCCGCTGCCTCTCGTAAGGCGGCCGCCCTCACTACCTCTGAAATTCTTCATCTCGGTTGTTCCTCCCTTCAACACTCTCCTCCCCCACCCCCACCAACCATCACTACTACTCACCATCATCATCATCTCCCACCCCACTTCTATCCCTTCCCACTCCAGTACCTTCTTTTCTCGACCACCACCATTCCTTTCATCACAATAATTTCTGTACTAACACCTCTGCCTCCCCCGATGCTCTCTCTCCCACCAACACTGACCCCGCACTTGAACATCTAA

Protein sequence

MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPPPPPPTITTTHHHHHLPPHFYPFPLQYLLFSTTTIPFITIISVLTPLPPPMLSLPPTLTPHLNI

Homology

[Close]

BLAST of IVF0018269 vs. ExPASy Swiss-Prot
Match: Q9FFX4 (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.0e-10
Identity = 52/120 (43.33%), Postives = 59/120 (49.17%), Query Frame = 0


Query: 31  KAASSRKSHSQS--------RIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALT 90
           K  SS K HS S        R+FPC YCPRKFYTSQALGGHQNAHKRERAAA R    L 
Sbjct: 16  KTRSSSKRHSFSSSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARRNLGVLA 75

Query: 91  TSE---------ILHLGC--------SSLQHSPPPPPPTITTT--HHHHHLPPHFYPFPL 124
            S          +    C        S+  + P    PT+ T   +   H  P+ YPF L
Sbjct: 76  NSPPILDDNNTFLRPYPCFYQNPFQGSTSGNEPLQEQPTMMTMDGYDPFHPYPYVYPFAL 135

[Close]

BLAST of IVF0018269 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08
Identity = 32/54 (59.26%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 31 KAASSRKSHSQ--------SRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR 77
          K +SS  SH Q         R+F C YC RKFY+SQALGGHQNAHKRER  A R
Sbjct: 46 KTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 99

[Close]

BLAST of IVF0018269 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.1e-08
Identity = 36/89 (40.45%), Postives = 46/89 (51.69%), Query Frame = 0


Query: 35  SRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR------------KAAALT 94
           S K  +  R+F C YC RKFY+SQALGGHQNAHKRER  A R            +    T
Sbjct: 49  STKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYT 108

Query: 95  TSEI-LHLGCSSLQHSPPPPPPTITTTHH 111
           +S + +      L H+   P P ++  HH
Sbjct: 109 SSSLGMQAHSGLLHHTLSQPQPLVSRFHH 137

[Close]

BLAST of IVF0018269 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 2.7e-08
Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 0


Query: 22  STTTATVLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR 77
           S+T+ +  P+    ++     R+F C YC RKFY+SQALGGHQNAHKRER  A R
Sbjct: 62  SSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 116

[Close]

BLAST of IVF0018269 vs. ExPASy Swiss-Prot
Match: Q9FKA9 (Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.5e-08
Identity = 40/103 (38.83%), Postives = 53/103 (51.46%), Query Frame = 0


Query: 31  KAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAA---LTTSEIL 90
           +A  + ++ S  RIFPCL+C RKF++SQALGGHQNAHK+ER AA R   A   +  ++ L
Sbjct: 21  EANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRAYDFVNNNDFL 80

Query: 91  HLGCSSLQHSPPPPPPTITTTHHHHHLPPHFYPFPLQYLLFST 131
           H              P   ++   HHL    YP       F T
Sbjct: 81  H------------TLPVFLSSPSQHHLTILGYPASASVACFPT 111

[Close]

BLAST of IVF0018269 vs. ExPASy TrEMBL
Match: A0A0A0LDF1 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G509430 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 9.9e-54
Identity = 113/122 (92.62%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 1   MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKSHSQSRIFPCLYCPRKFYTSQAL 60
           MADPTIYDFLSQTTTA PSNNSTT    LPKAASSRKSHSQSRIFPCLYCPRKFYTSQAL
Sbjct: 1   MADPTIYDFLSQTTTAPPSNNSTT----LPKAASSRKSHSQSRIFPCLYCPRKFYTSQAL 60

Query: 61  GGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPPPPPPTITTTHHHHHLPPHFYP 120
           GGHQNAHKRERAAASRKAAALTT+EILHLGCSSLQHSPPPPPPT T THHHHHLPPHFYP
Sbjct: 61  GGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPPT-TITHHHHHLPPHFYP 117

Query: 121 FP 123
            P
Sbjct: 121 LP 117

[Close]

BLAST of IVF0018269 vs. ExPASy TrEMBL
Match: A0A6J1F843 (protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111441721 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.5e-25
Identity = 80/123 (65.04%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 1   MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQA 60
           MADP IYDFL+QTTTA+ S          PKA+   +S +S SRIFPCLYCPRKFYTSQA
Sbjct: 1   MADPAIYDFLTQTTTASNS---------APKASRKFQSQYSSSRIFPCLYCPRKFYTSQA 60

Query: 61  LGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPPPPPPTITTTHHHHHLPPHFY 120
           LGGHQNAHKRER AASRKA A   SEILHLG       PPPPPPT TTTHHH   P    
Sbjct: 61  LGGHQNAHKRER-AASRKAFA---SEILHLG-----SLPPPPPPTTTTTHHHLPQPYTVA 105

Query: 121 PFP 123
           P P
Sbjct: 121 PSP 105

[Close]

BLAST of IVF0018269 vs. ExPASy TrEMBL
Match: A0A6J1EJQ6 (protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111435120 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 2.1e-24
Identity = 76/111 (68.47%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 1   MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKSHSQSRIFPCLYCPRKFYTSQAL 60
           MADP IYDFLSQTT    ++NS    T    +  S+  +S SRIFPCLYCPRKFYTSQAL
Sbjct: 1   MADPAIYDFLSQTT----ASNSVPKTT----SRKSQSQYSSSRIFPCLYCPRKFYTSQAL 60

Query: 61  GGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPPPPPPTITTTHHH 112
           GGHQNAHKRER AASRKA    TSEILHLG  SLQHS PPPPP   TT+HH
Sbjct: 61  GGHQNAHKRER-AASRKA---FTSEILHLG--SLQHSRPPPPP--PTTYHH 95

[Close]

BLAST of IVF0018269 vs. ExPASy TrEMBL
Match: A0A6J1JQI7 (protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111486586 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 3.7e-24
Identity = 75/111 (67.57%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 1   MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKSHSQSRIFPCLYCPRKFYTSQAL 60
           MADP IYDFLSQTT    ++NS    T    +  S+  +S SRIFPCLYCPRKFYTSQAL
Sbjct: 1   MADPAIYDFLSQTT----ASNSVPKTT----SRKSQSQYSSSRIFPCLYCPRKFYTSQAL 60

Query: 61  GGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPPPPPPTITTTHHH 112
           GGHQNAHKRER AASRK   + TSEILHLG  SLQHS PPPPP   TT+HH
Sbjct: 61  GGHQNAHKRER-AASRK---VFTSEILHLG--SLQHSRPPPPP--PTTYHH 95

[Close]

BLAST of IVF0018269 vs. ExPASy TrEMBL
Match: A0A6J1J5R2 (protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111481997 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 2.6e-22
Identity = 77/123 (62.60%), Postives = 82/123 (66.67%), Query Frame = 0


Query: 1   MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQA 60
           MADP IYDFL+QTTTA+ S          PKA+   +S +S SRIFPCLYCPRKFYTSQA
Sbjct: 1   MADPAIYDFLTQTTTASNS---------APKASRKFQSQYSSSRIFPCLYCPRKFYTSQA 60

Query: 61  LGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPPPPPPTITTTHHHHHLPPHFY 120
           LGGHQNAHKRER AASRKA A   SEILHLG      S PP P T T THHH   P    
Sbjct: 61  LGGHQNAHKRER-AASRKAFA---SEILHLG------SLPPQPTTTTMTHHHLPQPYTVA 104

Query: 121 PFP 123
           P P
Sbjct: 121 PAP 104

[Close]

BLAST of IVF0018269 vs. NCBI nr
Match: KGN58096.1 (hypothetical protein Csa_017649 [Cucumis sativus])

HSP 1 Score: 219 bits (557), Expect = 5.14e-70
Identity = 113/122 (92.62%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 1   MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKSHSQSRIFPCLYCPRKFYTSQAL 60
           MADPTIYDFLSQTTTA PSNNSTT    LPKAASSRKSHSQSRIFPCLYCPRKFYTSQAL
Sbjct: 1   MADPTIYDFLSQTTTAPPSNNSTT----LPKAASSRKSHSQSRIFPCLYCPRKFYTSQAL 60

Query: 61  GGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPPPPPPTITTTHHHHHLPPHFYP 120
           GGHQNAHKRERAAASRKAAALTT+EILHLGCSSLQHSPPPPPPT T THHHHHLPPHFYP
Sbjct: 61  GGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPPT-TITHHHHHLPPHFYP 117

Query: 121 FP 122
            P
Sbjct: 121 LP 117

[Close]

BLAST of IVF0018269 vs. NCBI nr
Match: KAG6581122.1 (Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 127 bits (320), Expect = 7.21e-34
Identity = 81/116 (69.83%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 1   MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQA 60
           MADP IYDFL+QTTTA+ S          PKA+   +S +S SRIFPCLYCPRKFYTSQA
Sbjct: 1   MADPAIYDFLTQTTTASNS---------APKASRKFQSQYSSSRIFPCLYCPRKFYTSQA 60

Query: 61  LGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPPPPPPTITTTHHHHHLP 115
           LGGHQNAHKRERAA SRKA A   SEILHLG  SL   PPPPPPT TTT  HHHLP
Sbjct: 61  LGGHQNAHKRERAA-SRKAFA---SEILHLG--SLP--PPPPPPTTTTTTTHHHLP 99

[Close]

BLAST of IVF0018269 vs. NCBI nr
Match: XP_022934585.1 (protein LATE FLOWERING-like [Cucurbita moschata])

HSP 1 Score: 126 bits (317), Expect = 1.33e-33
Identity = 79/112 (70.54%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 1   MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQA 60
           MADP IYDFL+QTTTA+ S          PKA+   +S +S SRIFPCLYCPRKFYTSQA
Sbjct: 1   MADPAIYDFLTQTTTASNS---------APKASRKFQSQYSSSRIFPCLYCPRKFYTSQA 60

Query: 61  LGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPPPPPPTITTTHHH 111
           LGGHQNAHKRERAA SRKA A   SEILHLG  SL   PPPPPPT TTTHHH
Sbjct: 61  LGGHQNAHKRERAA-SRKAFA---SEILHLG--SL---PPPPPPTTTTTHHH 94

[Close]

BLAST of IVF0018269 vs. NCBI nr
Match: KAG7022634.1 (Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 125 bits (314), Expect = 3.37e-33
Identity = 81/113 (71.68%), Postives = 84/113 (74.34%), Query Frame = 0


Query: 1   MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKSHSQ---SRIFPCLYCPRKFYTS 60
           MADP IYDFLSQTT    ++NS      +PK  S RKS SQ   SRIFPCLYCPRKFYTS
Sbjct: 1   MADPAIYDFLSQTT----ASNS------VPKTTS-RKSQSQYSSSRIFPCLYCPRKFYTS 60

Query: 61  QALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPPPPPPTITTTHH 110
           QALGGHQNAHKRERAA SRKA    TSEILHLG  SLQHS PPPPP  TT HH
Sbjct: 61  QALGGHQNAHKRERAA-SRKA---FTSEILHLG--SLQHSRPPPPPPPTTYHH 96

[Close]

BLAST of IVF0018269 vs. NCBI nr
Match: KAG7017856.1 (Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 124 bits (312), Expect = 1.01e-32
Identity = 80/116 (68.97%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 1   MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQA 60
           MADP IYDFL+QTTTA+ S          PKA+   +S +S SRIFPCLYCPRKFYTSQA
Sbjct: 1   MADPAIYDFLTQTTTASNS---------APKASRKFQSQYSSSRIFPCLYCPRKFYTSQA 60

Query: 61  LGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPPPPPPTITTTHHHHHLP 115
           LGGHQNAHKRERAA SRKA A   SEILHLG  SL   PPPPP T TTT  HHHLP
Sbjct: 61  LGGHQNAHKRERAA-SRKAFA---SEILHLG--SLP--PPPPPTTTTTTTTHHHLP 99

[Close]

BLAST of IVF0018269 vs. TAIR 10
Match: AT5G14010.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 7.1e-12
Identity = 52/120 (43.33%), Postives = 59/120 (49.17%), Query Frame = 0


Query: 31  KAASSRKSHSQS--------RIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALT 90
           K  SS K HS S        R+FPC YCPRKFYTSQALGGHQNAHKRERAAA R    L 
Sbjct: 16  KTRSSSKRHSFSSSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARRNLGVLA 75

Query: 91  TSE---------ILHLGC--------SSLQHSPPPPPPTITTT--HHHHHLPPHFYPFPL 124
            S          +    C        S+  + P    PT+ T   +   H  P+ YPF L
Sbjct: 76  NSPPILDDNNTFLRPYPCFYQNPFQGSTSGNEPLQEQPTMMTMDGYDPFHPYPYVYPFAL 135

[Close]

BLAST of IVF0018269 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 61.2 bits (147), Expect = 8.7e-10
Identity = 32/54 (59.26%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 31 KAASSRKSHSQ--------SRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR 77
          K +SS  SH Q         R+F C YC RKFY+SQALGGHQNAHKRER  A R
Sbjct: 46 KTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 99

[Close]

BLAST of IVF0018269 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-09
Identity = 36/89 (40.45%), Postives = 46/89 (51.69%), Query Frame = 0


Query: 35  SRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR------------KAAALT 94
           S K  +  R+F C YC RKFY+SQALGGHQNAHKRER  A R            +    T
Sbjct: 49  STKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYT 108

Query: 95  TSEI-LHLGCSSLQHSPPPPPPTITTTHH 111
           +S + +      L H+   P P ++  HH
Sbjct: 109 SSSLGMQAHSGLLHHTLSQPQPLVSRFHH 137

[Close]

BLAST of IVF0018269 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 60.1 bits (144), Expect = 1.9e-09
Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 0


Query: 22  STTTATVLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR 77
           S+T+ +  P+    ++     R+F C YC RKFY+SQALGGHQNAHKRER  A R
Sbjct: 62  SSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 116

[Close]

BLAST of IVF0018269 vs. TAIR 10
Match: AT5G48890.1 (C2H2-like zinc finger protein )

HSP 1 Score: 59.7 bits (143), Expect = 2.5e-09
Identity = 40/103 (38.83%), Postives = 53/103 (51.46%), Query Frame = 0


Query: 31  KAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAA---LTTSEIL 90
           +A  + ++ S  RIFPCL+C RKF++SQALGGHQNAHK+ER AA R   A   +  ++ L
Sbjct: 21  EANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRAYDFVNNNDFL 80

Query: 91  HLGCSSLQHSPPPPPPTITTTHHHHHLPPHFYPFPLQYLLFST 131
           H              P   ++   HHL    YP       F T
Sbjct: 81  H------------TLPVFLSSPSQHHLTILGYPASASVACFPT 111

The following BLAST results are available for this feature:

BLAST of IVF0018269 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFX4	1.0e-10	43.33	Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1	[more]
Q42485	1.2e-08	59.26	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39266	2.1e-08	40.45	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q39263	2.7e-08	52.73	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q9FKA9	3.5e-08	38.83	Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1	[more]

BLAST of IVF0018269 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDF1	9.9e-54	92.62	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G509430 P...	[more]
A0A6J1F843	2.5e-25	65.04	protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111441721 PE=4 S...	[more]
A0A6J1EJQ6	2.1e-24	68.47	protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111435120 PE=4 S...	[more]
A0A6J1JQI7	3.7e-24	67.57	protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111486586 PE=4 SV=...	[more]
A0A6J1J5R2	2.6e-22	62.60	protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111481997 PE=4 SV=...	[more]

BLAST of IVF0018269 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN58096.1	5.14e-70	92.62	hypothetical protein Csa_017649 [Cucumis sativus]	[more]
KAG6581122.1	7.21e-34	69.83	Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022934585.1	1.33e-33	70.54	protein LATE FLOWERING-like [Cucurbita moschata]	[more]
KAG7022634.1	3.37e-33	71.68	Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
KAG7017856.1	1.01e-32	68.97	Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]

BLAST of IVF0018269 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14010.1	7.1e-12	43.33	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G80730.1	8.7e-10	59.26	zinc-finger protein 1	[more]
AT1G24625.1	1.5e-09	40.45	zinc finger protein 7	[more]
AT1G66140.1	1.9e-09	52.73	zinc finger protein 4	[more]
AT5G48890.1	2.5e-09	38.83	C2H2-like zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 19..89 e-value: 2.3E-7 score: 32.5
None	No IPR available	PANTHER	PTHR45730:SF28	OS02G0182300 PROTEIN	coord: 16..106
None	No IPR available	PANTHER	PTHR45730	ZINC FINGER PROTEIN JAGGED	coord: 16..106
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 47..67
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 45..72 score: 10.595541
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 42..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0018269.1	IVF0018269.1	mRNA