
IVF0018256 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGATATAACGGTCGAGGCTACCATGACAGAGATGGAGAGAAAAGTTAACTTCCTGATGAAGGTTGTGGAGGAACGAGACCATGAAATCACAATTTCGAGAGAGCAGATGCGGACTCATGAAACTGTTGAGTCAAGTCAAACTCCTATTGTCAAAGCTACTGATAAAGGGAAGAATGTAGTGTAG ATGGCTGATATAACGGTCGAGGCTACCATGACAGAGATGGAGAGAAAAGTTAACTTCCTGATGAAGGTTGTGGAGGAACGAGACCATGAAATCACAATTTCGAGAGAGCAGATGCGGACTCATGAAACTGTTGAGTCAAGTCAAACTCCTATTGTCAAAGCTACTGATAAAGGGAAGAATGTAGTGTAG ATGGCTGATATAACGGTCGAGGCTACCATGACAGAGATGGAGAGAAAAGTTAACTTCCTGATGAAGGTTGTGGAGGAACGAGACCATGAAATCACAATTTCGAGAGAGCAGATGCGGACTCATGAAACTGTTGAGTCAAGTCAAACTCCTATTGTCAAAGCTACTGATAAAGGGAAGAATGTAGTGTAG MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV Homology
BLAST of IVF0018256 vs. ExPASy TrEMBL
Match: A0A5A7UAR4 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold148G00240 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 4.5e-23 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0
BLAST of IVF0018256 vs. ExPASy TrEMBL
Match: A0A5A7UWX8 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G00740 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.2e-18 Identity = 53/62 (85.48%), Postives = 57/62 (91.94%), Query Frame = 0
BLAST of IVF0018256 vs. ExPASy TrEMBL
Match: A0A5D3C8K3 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00620 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.2e-18 Identity = 53/62 (85.48%), Postives = 57/62 (91.94%), Query Frame = 0
BLAST of IVF0018256 vs. ExPASy TrEMBL
Match: A0A5A7TYE9 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G00410 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.5e-18 Identity = 53/62 (85.48%), Postives = 55/62 (88.71%), Query Frame = 0
BLAST of IVF0018256 vs. ExPASy TrEMBL
Match: A0A5A7UG56 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00780 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 2.0e-18 Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 0
BLAST of IVF0018256 vs. NCBI nr
Match: KAA0051467.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK04154.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 118 bits (295), Expect = 3.43e-33 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0
BLAST of IVF0018256 vs. NCBI nr
Match: TYK22865.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 102 bits (253), Expect = 5.33e-26 Identity = 53/62 (85.48%), Postives = 55/62 (88.71%), Query Frame = 0
BLAST of IVF0018256 vs. NCBI nr
Match: KAA0048603.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK27187.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 103 bits (256), Expect = 5.53e-26 Identity = 53/62 (85.48%), Postives = 55/62 (88.71%), Query Frame = 0
BLAST of IVF0018256 vs. NCBI nr
Match: KAA0041105.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 100 bits (249), Expect = 8.28e-26 Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 0
BLAST of IVF0018256 vs. NCBI nr
Match: TYK21903.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 100 bits (249), Expect = 1.13e-25 Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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