IVF0018193 (gene) Melon (IVF77) v1

Overview


Name	IVF0018193
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	GATA transcription factor
Location	tig00000430: 682368 .. 683906 (+)
RNA-Seq Expression	IVF0018193
Synteny	IVF0018193

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGTGTCGGTTTGATTGAGATTCCCATTTTCATCATTCTTCCTTTCTTTCTCCCTCTCCCTCTCTTCATTTTCCTTGCAATCTTTCCTTTTCCCTCGGTTTTCTTAATACCCAACCCCTTCTTTCTCTTCACTTCATTCCCTCTTTCTCTTTAATCTTATCTCTTTCTTATCCCTTTTCTTTCCACCATTGATTTCCTCTTCTACGTTTCATCCATTTCTTCCTTCCTTCCTTCCGTCTCAGATCCCCTTTTCTTCTTTGATCTCCTTTCCCCACTGTCTTCCTCTGTTTCTGATCCAGGGTTTCCCACTTACTTACTCTTTGGTTCTCTGCTCTCTGATCCTTTCACTCTCCACCCACTTCGAGTTTTGGGTTTTTGGAATCTGGGTTTCTCTTAGATCTCTTTAGTAGTGGGTGTATCATGATGGATCCGAGTGATAGAGTGAGTACTAACCTCTGTTTTTTGCCGATTACTTCTGATTTTGATGGTCTCTGATCAGTGTTTGTTAATGGTGCAGGGATCGGAATCGGAGGACATGTCCGGGAAGAACTCTAGTGGGGTTTCGTCGGAGGAGAGTCAAGTGAATGAGCAGAACAAGAAGACTTGTGCTGACTGTGGTACTTCGAAAACCCCTTTATGGAGAGGCGGTCCGGCTGGTCCTAAGGTGATTTTTCATTGATTGATCTGAAGTTTAATACACATAGGAAGCGTTTTTTTTTTTTTTTTTTTTGTAGATTCAAATCTCTGATTTCTGCTTGTTTTTCTTTCTGATTTTTCAGTCTCTTTGCAATGCGTGTGGGATCAGAAGTAGGAAGAAGAGAAGAGCGATTTTAGGGTTGAGCAAAGGAGTCGTTGAAGATAAGAAGAACAAAAAGAGCAGTAATATTAGTAGTAATAGTAAGTTGAGAGATAGTTTGAAACAAAGGCTTTTGGCTTTGGGTAGAGAAGTTTTGATGCAGAGATCTACTGTTGAAAGACAAAGGAAGAAGTTAGGAGAAGAAGAACAAGCTGCTGTGCTTTTGATGGCTTTATCTTGTGGCTCTGTTTATGCTTGAAATAGCCATTGTCGTTATGATCAGAAAGAACAATAAGACCAAAAAAAAAAGTTGTTCTAAAGCAGCAAAATCTGACCCAGAAGTGTATCTTCTTCATCCATTTTGTTAAATCTTTCCCCAAATATTGAGTGAAATTCTCTTAGTTCATTATTATTATTCCTCCTCCCCCCCAGGATCTCTTCCCCTTTTTTGTTGTATTAACTAACCATTGGTTTTTTTTTGGATGTTGAAGAGCAATGAGTAATGAGTAATGTAGTTTTATTAATGAGGGATAATGAATTTTGTTGAACATTGTCATTGCCGATTCTTGTCTCTTGATGATCTCCAAATTCAATCAAACTTATTAATTAGAGACATGTGTTGTGATTACTAAGAAATTTGTGCTTGTTTTGGTGTTCATTAATTGATTTTTGTGTAAAATATGGTGGCATTAAACAGTTGTAATAATGAAGTGGAAAGGAACTTGAACTTTTAATAATTTA

mRNA sequence

ATTTGTGTCGGTTTGATTGAGATTCCCATTTTCATCATTCTTCCTTTCTTTCTCCCTCTCCCTCTCTTCATTTTCCTTGCAATCTTTCCTTTTCCCTCGGTTTTCTTAATACCCAACCCCTTCTTTCTCTTCACTTCATTCCCTCTTTCTCTTTAATCTTATCTCTTTCTTATCCCTTTTCTTTCCACCATTGATTTCCTCTTCTACGTTTCATCCATTTCTTCCTTCCTTCCTTCCGTCTCAGATCCCCTTTTCTTCTTTGATCTCCTTTCCCCACTGTCTTCCTCTGTTTCTGATCCAGGGTTTCCCACTTACTTACTCTTTGGTTCTCTGCTCTCTGATCCTTTCACTCTCCACCCACTTCGAGTTTTGGGTTTTTGGAATCTGGGTTTCTCTTAGATCTCTTTAGTAGTGGGTGTATCATGATGGATCCGAGTGATAGAGTGAGTACTAACCTCTGTTTTTTGCCGATTACTTCTGATTTTGATGGTCTCTGATCAGTGTTTGTTAATGGTGCAGGGATCGGAATCGGAGGACATGTCCGGGAAGAACTCTAGTGGGGTTTCGTCGGAGGAGAGTCAAGTGAATGAGCAGAACAAGAAGACTTGTGCTGACTGTGGTACTTCGAAAACCCCTTTATGGAGAGGCGGTCCGGCTGGTCCTAAGTCTCTTTGCAATGCGTGTGGGATCAGAAGTAGGAAGAAGAGAAGAGCGATTTTAGGGTTGAGCAAAGGAGTCGTTGAAGATAAGAAGAACAAAAAGAGCAGTAATATTAGTAGTAATAGTAAGTTGAGAGATAGTTTGAAACAAAGGCTTTTGGCTTTGGGTAGAGAAGTTTTGATGCAGAGATCTACTGTTGAAAGACAAAGGAAGAAGTTAGGAGAAGAAGAACAAGCTGCTGTGCTTTTGATGGCTTTATCTTGTGGCTCTGTTTATGCTTGAAATAGCCATTGTCGTTATGATCAGAAAGAACAATAAGACCAAAAAAAAAAGTTGTTCTAAAGCAGCAAAATCTGACCCAGAAGTGTATCTTCTTCATCCATTTTGTTAAATCTTTCCCCAAATATTGAGTGAAATTCTCTTAGTTCATTATTATTATTCCTCCTCCCCCCCAGGATCTCTTCCCCTTTTTTGTTGTATTAACTAACCATTGGTTTTTTTTTGGATGTTGAAGAGCAATGAGTAATGAGTAATGTAGTTTTATTAATGAGGGATAATGAATTTTGTTGAACATTGTCATTGCCGATTCTTGTCTCTTGATGATCTCCAAATTCAATCAAACTTATTAATTAGAGACATGTGTTGTGATTACTAAGAAATTTGTGCTTGTTTTGGTGTTCATTAATTGATTTTTGTGTAAAATATGGTGGCATTAAACAGTTGTAATAATGAAGTGGAAAGGAACTTGAACTTTTAATAATTTA

Coding sequence (CDS)

ATGGTCTCTGATCAGTGTTTGTTAATGGTGCAGGGATCGGAATCGGAGGACATGTCCGGGAAGAACTCTAGTGGGGTTTCGTCGGAGGAGAGTCAAGTGAATGAGCAGAACAAGAAGACTTGTGCTGACTGTGGTACTTCGAAAACCCCTTTATGGAGAGGCGGTCCGGCTGGTCCTAAGTCTCTTTGCAATGCGTGTGGGATCAGAAGTAGGAAGAAGAGAAGAGCGATTTTAGGGTTGAGCAAAGGAGTCGTTGAAGATAAGAAGAACAAAAAGAGCAGTAATATTAGTAGTAATAGTAAGTTGAGAGATAGTTTGAAACAAAGGCTTTTGGCTTTGGGTAGAGAAGTTTTGATGCAGAGATCTACTGTTGAAAGACAAAGGAAGAAGTTAGGAGAAGAAGAACAAGCTGCTGTGCTTTTGATGGCTTTATCTTGTGGCTCTGTTTATGCTTGA

Protein sequence

MVSDQCLLMVQGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTVERQRKKLGEEEQAAVLLMALSCGSVYA

Homology

[Close]

BLAST of IVF0018193 vs. ExPASy Swiss-Prot
Match: Q9FJ10 (GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-33
Identity = 85/138 (61.59%), Postives = 101/138 (73.19%), Query Frame = 0


Query: 14  ESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKK 73
           +SE M  +    +    + VN++ KKTCADCGTSKTPLWRGGP GPKSLCNACGIR+RKK
Sbjct: 12  DSETMKTRAEDMIEQNNTSVNDK-KKTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKK 71

Query: 74  RRAILGLSKGVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTVERQRKKLGE 133
           RR       G  ++KK KKSS+   N K  +SLKQ L+ LG   + +RSTVE+QR+KLGE
Sbjct: 72  RRG------GTEDNKKLKKSSSGGGNRKFGESLKQSLMDLG---IRKRSTVEKQRQKLGE 131

Query: 134 EEQAAVLLMALSCGSVYA 152
           EEQAAVLLMALS GSVYA
Sbjct: 132 EEQAAVLLMALSYGSVYA 139

[Close]

BLAST of IVF0018193 vs. ExPASy Swiss-Prot
Match: Q8LG10 (GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2)

HSP 1 Score: 140.2 bits (352), Expect = 1.9e-32
Identity = 93/146 (63.70%), Postives = 104/146 (71.23%), Query Frame = 0


Query: 14  ESEDMSGKNSSGVSSEESQVNEQN------KKTCADCGTSKTPLWRGGPAGPKSLCNACG 73
           +SE M  K +S  + EE   +  N      KK+CA CGTSKTPLWRGGPAGPKSLCNACG
Sbjct: 10  DSESMESKLTSVDAIEEHSSSSSNEAISNEKKSCAICGTSKTPLWRGGPAGPKSLCNACG 69

Query: 74  IRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTVERQ 133
           IR+RKKRR ++       EDKK KKS N   N K  DSLKQRL+ LGREV+MQRST E Q
Sbjct: 70  IRNRKKRRTLISNRS---EDKK-KKSHN--RNPKFGDSLKQRLMELGREVMMQRSTAENQ 129

Query: 134 RK-KLGEEEQAAVLLMALS-CGSVYA 152
           R+ KLGEEEQAAVLLMALS   SVYA
Sbjct: 130 RRNKLGEEEQAAVLLMALSYASSVYA 149

[Close]

BLAST of IVF0018193 vs. ExPASy Swiss-Prot
Match: Q9LIB5 (GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.5e-24
Identity = 80/179 (44.69%), Postives = 101/179 (56.42%), Query Frame = 0


Query: 14  ESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKK 73
           E  D+  +N S   S     +   K+TC DCGT +TPLWRGGPAGPKSLCNACGI+SRKK
Sbjct: 17  ELSDVDNENCSSSGSGGGSSSGDTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKK 76

Query: 74  RRAILGLSK---------------------------GVVEDKK-----------NKKSSN 133
           R+A LG+                              +V+D K           NK+SS+
Sbjct: 77  RQAALGMRSEEKKKNRKSNCNNDLNLDHRNAKKYKINIVDDGKIDIDDDPKICNNKRSSS 136

Query: 134 ISSNSKLRDSLKQRLLALGREV-LMQRSTVERQR--KKLGEEEQAAVLLMALSCGSVYA 152
            SSN  +      + L LG +V +M+RS VE++R  +KLGEEE+AAVLLMALSC SVYA
Sbjct: 137 SSSNKGV-----SKFLDLGFKVPVMKRSAVEKKRLWRKLGEEERAAVLLMALSCSSVYA 190

[Close]

BLAST of IVF0018193 vs. ExPASy Swiss-Prot
Match: Q8LC59 (GATA transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=GATA23 PE=2 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-13
Identity = 51/129 (39.53%), Postives = 70/129 (54.26%), Query Frame = 0


Query: 23  SSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKRRAILGLSK 82
           SS   S   +  +   + C++C T+KTP+WRGGP GPKSLCNACGIR RK+RR+ L L  
Sbjct: 10  SSSYVSVRMKEEKGTIRCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRSEL-LGI 69

Query: 83  GVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTVERQRKKLGEEEQAAVLLM 142
            ++   K+  S  I+  S     +                   ++R+ L EEEQAA+ L+
Sbjct: 70  HIIRSHKSLASKKINLLSSSHGGV-----------------AVKKRRSLKEEEQAALCLL 120

Query: 143 ALSCGSVYA 152
            LSC SV A
Sbjct: 130 LLSCSSVLA 120

[Close]

BLAST of IVF0018193 vs. ExPASy Swiss-Prot
Match: Q9SZI6 (Putative GATA transcription factor 22 OS=Arabidopsis thaliana OX=3702 GN=GATA22 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 63/194 (32.47%), Postives = 90/194 (46.39%), Query Frame = 0


Query: 1   MVSDQCLLMVQGSESEDMSGKNSSGVSSEESQVNEQNK---KTCADCGTSKTPLWRGGPA 60
           M   + ++    S  +  +   SS +S+ E Q    N    + C+DC T+KTPLWR GP 
Sbjct: 158 MKKKKAIITTSDSSKQHTNNDQSSNLSNSERQNGYNNDCVIRICSDCNTTKTPLWRSGPR 217

Query: 61  GPKSLCNACGIRSRKKRR---------AILGLSKGVVEDK---KNKKSS---NISSNSKL 120
           GPKSLCNACGIR RK RR         A+ G+S  V++ K   KNK S+    I S   L
Sbjct: 218 GPKSLCNACGIRQRKARRAAMATATATAVSGVSPPVMKKKMQNKNKISNGVYKILSPLPL 277

Query: 121 RDSLKQRLLALGREVLMQRSTVERQRKKLG--------------------------EEEQ 151
           + +  +R++ L    L +    +     L                           +E++
Sbjct: 278 KVNTCKRMITLEETALAEDLETQSNSTMLSSSDNIYFDDLALLLSKSSAYQQVFPQDEKE 337

[Close]

BLAST of IVF0018193 vs. ExPASy TrEMBL
Match: A0A5A7U5C0 (GATA transcription factor 16-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001340 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.6e-66
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 11  QGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS 70
           +GSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS
Sbjct: 7   RGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS 66

Query: 71  RKKRRAILGLSKGVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTVERQRKK 130
           RKKRRAILGLSKGVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTVERQRKK
Sbjct: 67  RKKRRAILGLSKGVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTVERQRKK 126

Query: 131 LGEEEQAAVLLMALSCGSVYA 152
           LGEEEQAAVLLMALSCGSVYA
Sbjct: 127 LGEEEQAAVLLMALSCGSVYA 147

[Close]

BLAST of IVF0018193 vs. ExPASy TrEMBL
Match: A0A1S3AXI2 (GATA transcription factor 16-like OS=Cucumis melo OX=3656 GN=LOC103483877 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.6e-66
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 11  QGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS 70
           +GSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS
Sbjct: 7   RGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS 66

Query: 71  RKKRRAILGLSKGVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTVERQRKK 130
           RKKRRAILGLSKGVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTVERQRKK
Sbjct: 67  RKKRRAILGLSKGVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTVERQRKK 126

Query: 131 LGEEEQAAVLLMALSCGSVYA 152
           LGEEEQAAVLLMALSCGSVYA
Sbjct: 127 LGEEEQAAVLLMALSCGSVYA 147

[Close]

BLAST of IVF0018193 vs. ExPASy TrEMBL
Match: A0A0A0L942 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G165640 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.0e-65
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 11  QGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS 70
           +GSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS
Sbjct: 8   RGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS 67

Query: 71  RKKRRAILGLSKGVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTVERQRKK 130
           RKKRRAILGLSKGVVEDKKNKKSSNISSNSK RDSLKQRLLALGREVLMQRSTVERQRKK
Sbjct: 68  RKKRRAILGLSKGVVEDKKNKKSSNISSNSKFRDSLKQRLLALGREVLMQRSTVERQRKK 127

Query: 131 LGEEEQAAVLLMALSCGSVYA 152
           LGEEEQAAVLLMALSCGSVYA
Sbjct: 128 LGEEEQAAVLLMALSCGSVYA 148

[Close]

BLAST of IVF0018193 vs. ExPASy TrEMBL
Match: A0A6J1C7L6 (GATA transcription factor 16-like OS=Momordica charantia OX=3673 GN=LOC111009131 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.7e-60
Identity = 136/145 (93.79%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 11  QGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS 70
           +GSESEDMSGKNS GVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS
Sbjct: 8   RGSESEDMSGKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS 67

Query: 71  RKKRRAILGLSKGVVEDKKNKK-SSNISSN---SKLRDSLKQRLLALGREVLMQRSTVER 130
           RKKRRAILGLSKGVVEDKK+KK SSNISSN   S+LRDSLKQRLLALGREVLMQRSTVER
Sbjct: 68  RKKRRAILGLSKGVVEDKKSKKSSSNISSNSSSSRLRDSLKQRLLALGREVLMQRSTVER 127

Query: 131 QRKKLGEEEQAAVLLMALSCGSVYA 152
           QRKKLGEEEQAAVLLMALS GSVYA
Sbjct: 128 QRKKLGEEEQAAVLLMALSYGSVYA 152

[Close]

BLAST of IVF0018193 vs. ExPASy TrEMBL
Match: A0A6J1IY32 (GATA transcription factor 15-like OS=Cucurbita maxima OX=3661 GN=LOC111479506 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 8.1e-58
Identity = 129/142 (90.85%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 11  QGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS 70
           +GSESED+SGKNS GVSSEES VNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS
Sbjct: 7   RGSESEDISGKNSGGVSSEESIVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS 66

Query: 71  RKKRRAILGLSKGVVEDKKNKK-SSNISSNSKLRDSLKQRLLALGREVLMQRSTVERQRK 130
           RKKRRAILGL++GVVEDKK+KK SSN  S+SKLRDSLKQRLLALGREVLMQRS+VERQRK
Sbjct: 67  RKKRRAILGLNRGVVEDKKSKKSSSNNISHSKLRDSLKQRLLALGREVLMQRSSVERQRK 126

Query: 131 KLGEEEQAAVLLMALSCGSVYA 152
           KLGEEEQAAVLLMALS GSVYA
Sbjct: 127 KLGEEEQAAVLLMALSYGSVYA 148

[Close]

BLAST of IVF0018193 vs. NCBI nr
Match: XP_008438922.1 (PREDICTED: GATA transcription factor 16-like [Cucumis melo] >KAA0049527.1 GATA transcription factor 16-like [Cucumis melo var. makuwa] >TYK16205.1 GATA transcription factor 16-like [Cucumis melo var. makuwa])

HSP 1 Score: 263 bits (671), Expect = 7.52e-88
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 11  QGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS 70
           +GSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS
Sbjct: 7   RGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS 66

Query: 71  RKKRRAILGLSKGVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTVERQRKK 130
           RKKRRAILGLSKGVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTVERQRKK
Sbjct: 67  RKKRRAILGLSKGVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTVERQRKK 126

Query: 131 LGEEEQAAVLLMALSCGSVYA 151
           LGEEEQAAVLLMALSCGSVYA
Sbjct: 127 LGEEEQAAVLLMALSCGSVYA 147

[Close]

BLAST of IVF0018193 vs. NCBI nr
Match: XP_004134235.1 (GATA transcription factor 16 [Cucumis sativus] >KGN57147.1 hypothetical protein Csa_010926 [Cucumis sativus])

HSP 1 Score: 261 bits (667), Expect = 3.17e-87
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 11  QGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS 70
           +GSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS
Sbjct: 8   RGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS 67

Query: 71  RKKRRAILGLSKGVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTVERQRKK 130
           RKKRRAILGLSKGVVEDKKNKKSSNISSNSK RDSLKQRLLALGREVLMQRSTVERQRKK
Sbjct: 68  RKKRRAILGLSKGVVEDKKNKKSSNISSNSKFRDSLKQRLLALGREVLMQRSTVERQRKK 127

Query: 131 LGEEEQAAVLLMALSCGSVYA 151
           LGEEEQAAVLLMALSCGSVYA
Sbjct: 128 LGEEEQAAVLLMALSCGSVYA 148

[Close]

BLAST of IVF0018193 vs. NCBI nr
Match: XP_038877875.1 (GATA transcription factor 15-like [Benincasa hispida])

HSP 1 Score: 248 bits (634), Expect = 3.29e-82
Identity = 135/141 (95.74%), Postives = 138/141 (97.87%), Query Frame = 0


Query: 11  QGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS 70
           +GSESEDMSGKN+ GVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS
Sbjct: 8   RGSESEDMSGKNTGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS 67

Query: 71  RKKRRAILGLSKGVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTVERQRKK 130
           RKKRRAILGLSKGVVEDKKNKKS+NIS NSKLRDSLKQRLLALGREVLMQRSTVERQRKK
Sbjct: 68  RKKRRAILGLSKGVVEDKKNKKSNNIS-NSKLRDSLKQRLLALGREVLMQRSTVERQRKK 127

Query: 131 LGEEEQAAVLLMALSCGSVYA 151
           LGEEEQAAVLLMALS GSVYA
Sbjct: 128 LGEEEQAAVLLMALSYGSVYA 147

[Close]

BLAST of IVF0018193 vs. NCBI nr
Match: XP_022137770.1 (GATA transcription factor 16-like [Momordica charantia])

HSP 1 Score: 244 bits (622), Expect = 2.62e-80
Identity = 136/145 (93.79%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 11  QGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS 70
           +GSESEDMSGKNS GVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS
Sbjct: 8   RGSESEDMSGKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS 67

Query: 71  RKKRRAILGLSKGVVEDKKNKKSS-NISSNS---KLRDSLKQRLLALGREVLMQRSTVER 130
           RKKRRAILGLSKGVVEDKK+KKSS NISSNS   +LRDSLKQRLLALGREVLMQRSTVER
Sbjct: 68  RKKRRAILGLSKGVVEDKKSKKSSSNISSNSSSSRLRDSLKQRLLALGREVLMQRSTVER 127

Query: 131 QRKKLGEEEQAAVLLMALSCGSVYA 151
           QRKKLGEEEQAAVLLMALS GSVYA
Sbjct: 128 QRKKLGEEEQAAVLLMALSYGSVYA 152

[Close]

BLAST of IVF0018193 vs. NCBI nr
Match: XP_022956292.1 (GATA transcription factor 15-like [Cucurbita moschata] >XP_022979974.1 GATA transcription factor 15-like [Cucurbita maxima] >XP_023529146.1 GATA transcription factor 15-like [Cucurbita pepo subsp. pepo] >KAG6582187.1 GATA transcription factor 15, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018583.1 GATA transcription factor 15 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 235 bits (599), Expect = 7.33e-77
Identity = 129/142 (90.85%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 11  QGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS 70
           +GSESED+SGKNS GVSSEES VNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS
Sbjct: 7   RGSESEDISGKNSGGVSSEESIVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS 66

Query: 71  RKKRRAILGLSKGVVEDKKNKKSS-NISSNSKLRDSLKQRLLALGREVLMQRSTVERQRK 130
           RKKRRAILGL++GVVEDKK+KKSS N  S+SKLRDSLKQRLLALGREVLMQRS+VERQRK
Sbjct: 67  RKKRRAILGLNRGVVEDKKSKKSSSNNISHSKLRDSLKQRLLALGREVLMQRSSVERQRK 126

Query: 131 KLGEEEQAAVLLMALSCGSVYA 151
           KLGEEEQAAVLLMALS GSVYA
Sbjct: 127 KLGEEEQAAVLLMALSYGSVYA 148

[Close]

BLAST of IVF0018193 vs. TAIR 10
Match: AT5G49300.1 (GATA transcription factor 16 )

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-34
Identity = 85/138 (61.59%), Postives = 101/138 (73.19%), Query Frame = 0


Query: 14  ESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKK 73
           +SE M  +    +    + VN++ KKTCADCGTSKTPLWRGGP GPKSLCNACGIR+RKK
Sbjct: 12  DSETMKTRAEDMIEQNNTSVNDK-KKTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKK 71

Query: 74  RRAILGLSKGVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTVERQRKKLGE 133
           RR       G  ++KK KKSS+   N K  +SLKQ L+ LG   + +RSTVE+QR+KLGE
Sbjct: 72  RRG------GTEDNKKLKKSSSGGGNRKFGESLKQSLMDLG---IRKRSTVEKQRQKLGE 131

Query: 134 EEQAAVLLMALSCGSVYA 152
           EEQAAVLLMALS GSVYA
Sbjct: 132 EEQAAVLLMALSYGSVYA 139

[Close]

BLAST of IVF0018193 vs. TAIR 10
Match: AT3G06740.1 (GATA transcription factor 15 )

HSP 1 Score: 140.2 bits (352), Expect = 1.4e-33
Identity = 93/146 (63.70%), Postives = 104/146 (71.23%), Query Frame = 0


Query: 14  ESEDMSGKNSSGVSSEESQVNEQN------KKTCADCGTSKTPLWRGGPAGPKSLCNACG 73
           +SE M  K +S  + EE   +  N      KK+CA CGTSKTPLWRGGPAGPKSLCNACG
Sbjct: 10  DSESMESKLTSVDAIEEHSSSSSNEAISNEKKSCAICGTSKTPLWRGGPAGPKSLCNACG 69

Query: 74  IRSRKKRRAILGLSKGVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTVERQ 133
           IR+RKKRR ++       EDKK KKS N   N K  DSLKQRL+ LGREV+MQRST E Q
Sbjct: 70  IRNRKKRRTLISNRS---EDKK-KKSHN--RNPKFGDSLKQRLMELGREVMMQRSTAENQ 129

Query: 134 RK-KLGEEEQAAVLLMALS-CGSVYA 152
           R+ KLGEEEQAAVLLMALS   SVYA
Sbjct: 130 RRNKLGEEEQAAVLLMALSYASSVYA 149

[Close]

BLAST of IVF0018193 vs. TAIR 10
Match: AT3G16870.1 (GATA transcription factor 17 )

HSP 1 Score: 114.0 bits (284), Expect = 1.0e-25
Identity = 80/179 (44.69%), Postives = 101/179 (56.42%), Query Frame = 0


Query: 14  ESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKK 73
           E  D+  +N S   S     +   K+TC DCGT +TPLWRGGPAGPKSLCNACGI+SRKK
Sbjct: 17  ELSDVDNENCSSSGSGGGSSSGDTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKK 76

Query: 74  RRAILGLSK---------------------------GVVEDKK-----------NKKSSN 133
           R+A LG+                              +V+D K           NK+SS+
Sbjct: 77  RQAALGMRSEEKKKNRKSNCNNDLNLDHRNAKKYKINIVDDGKIDIDDDPKICNNKRSSS 136

Query: 134 ISSNSKLRDSLKQRLLALGREV-LMQRSTVERQR--KKLGEEEQAAVLLMALSCGSVYA 152
            SSN  +      + L LG +V +M+RS VE++R  +KLGEEE+AAVLLMALSC SVYA
Sbjct: 137 SSSNKGV-----SKFLDLGFKVPVMKRSAVEKKRLWRKLGEEERAAVLLMALSCSSVYA 190

[Close]

BLAST of IVF0018193 vs. TAIR 10
Match: AT4G16141.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 102.1 bits (253), Expect = 4.1e-22
Identity = 78/186 (41.94%), Postives = 97/186 (52.15%), Query Frame = 0


Query: 14  ESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKK 73
           +S D+   N S   S         KKTC DCGTS+TPLWRGGPAGPKSLCNACGI+SRKK
Sbjct: 17  DSSDVDNGNCSSSGS-----GGDTKKTCVDCGTSRTPLWRGGPAGPKSLCNACGIKSRKK 76

Query: 74  RRAILG--------------------------------------------LSKGVVEDKK 133
           R+A LG                                            ++KG   + K
Sbjct: 77  RQAALGIRQDDIKIKSKSNNNLGLESRNVKTGKGEPVNVKIAKCEPGIVKIAKGEPGNVK 136

Query: 134 NK-----KSSNISSNSKLRDSLKQRLLALGREV-LMQRSTVERQR--KKLGEEEQAAVLL 148
           NK     ++S+ S+N+K       R L  G +V  M+RS VE++R  +KLGEEE+AAVLL
Sbjct: 137 NKIKRDPENSSSSNNNKKNVKRVGRFLDFGFKVPAMKRSAVEKKRLWRKLGEEERAAVLL 196

[Close]

BLAST of IVF0018193 vs. TAIR 10
Match: AT5G26930.1 (GATA transcription factor 23 )

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14
Identity = 51/129 (39.53%), Postives = 70/129 (54.26%), Query Frame = 0


Query: 23  SSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKRRAILGLSK 82
           SS   S   +  +   + C++C T+KTP+WRGGP GPKSLCNACGIR RK+RR+ L L  
Sbjct: 10  SSSYVSVRMKEEKGTIRCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRSEL-LGI 69

Query: 83  GVVEDKKNKKSSNISSNSKLRDSLKQRLLALGREVLMQRSTVERQRKKLGEEEQAAVLLM 142
            ++   K+  S  I+  S     +                   ++R+ L EEEQAA+ L+
Sbjct: 70  HIIRSHKSLASKKINLLSSSHGGV-----------------AVKKRRSLKEEEQAALCLL 120

Query: 143 ALSCGSVYA 152
            LSC SV A
Sbjct: 130 LLSCSSVLA 120

The following BLAST results are available for this feature:

BLAST of IVF0018193 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJ10	1.7e-33	61.59	GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1	[more]
Q8LG10	1.9e-32	63.70	GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2	[more]
Q9LIB5	1.5e-24	44.69	GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1	[more]
Q8LC59	1.5e-13	39.53	GATA transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=GATA23 PE=2 SV=2	[more]
Q9SZI6	1.1e-11	32.47	Putative GATA transcription factor 22 OS=Arabidopsis thaliana OX=3702 GN=GATA22 ...	[more]

BLAST of IVF0018193 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U5C0	3.6e-66	99.29	GATA transcription factor 16-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3AXI2	3.6e-66	99.29	GATA transcription factor 16-like OS=Cucumis melo OX=3656 GN=LOC103483877 PE=4 S...	[more]
A0A0A0L942	1.0e-65	98.58	GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G165640 P...	[more]
A0A6J1C7L6	1.7e-60	93.79	GATA transcription factor 16-like OS=Momordica charantia OX=3673 GN=LOC111009131...	[more]
A0A6J1IY32	8.1e-58	90.85	GATA transcription factor 15-like OS=Cucurbita maxima OX=3661 GN=LOC111479506 PE...	[more]

BLAST of IVF0018193 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438922.1	7.52e-88	99.29	PREDICTED: GATA transcription factor 16-like [Cucumis melo] >KAA0049527.1 GATA t...	[more]
XP_004134235.1	3.17e-87	98.58	GATA transcription factor 16 [Cucumis sativus] >KGN57147.1 hypothetical protein ...	[more]
XP_038877875.1	3.29e-82	95.74	GATA transcription factor 15-like [Benincasa hispida]	[more]
XP_022137770.1	2.62e-80	93.79	GATA transcription factor 16-like [Momordica charantia]	[more]
XP_022956292.1	7.33e-77	90.85	GATA transcription factor 15-like [Cucurbita moschata] >XP_022979974.1 GATA tran...	[more]

BLAST of IVF0018193 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49300.1	1.2e-34	61.59	GATA transcription factor 16	[more]
AT3G06740.1	1.4e-33	63.70	GATA transcription factor 15	[more]
AT3G16870.1	1.0e-25	44.69	GATA transcription factor 17	[more]
AT4G16141.1	4.1e-22	41.94	GATA type zinc finger transcription factor family protein	[more]
AT5G26930.1	1.1e-14	39.53	GATA transcription factor 23	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 35..99 e-value: 5.3E-13 score: 59.2
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 41..75 e-value: 9.0E-17 score: 60.4
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 41..66
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 35..71 score: 12.347239
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 40..75 e-value: 4.37434E-13 score: 58.153
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 35..135 e-value: 1.1E-16 score: 62.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..52
None	No IPR available	PANTHER	PTHR47172	OS01G0976800 PROTEIN	coord: 12..151
None	No IPR available	PANTHER	PTHR47172:SF1	OS01G0976800 PROTEIN	coord: 12..151
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 34..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0018193.4	IVF0018193.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding