IVF0018143 (gene) Melon (IVF77) v1

Overview


Name	IVF0018143
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	metalloendoproteinase 4-MMP
Location	tig00195367: 534873 .. 535632 (+)
RNA-Seq Expression	IVF0018143
Synteny	IVF0018143

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGATGGTGCTCACGTACGCATTCTTCAAGGAGAATTGGATGAGCAACTTGAGTTTAAAAGACGTGAGAGCCGTATTTCGCAAGGCGTTTTCGAAATGGGCCCACGTGATTCCGGTGAGTTTTGAGGAGACCGACGACTATGGGTACGCCGATATTAAAATCGGGTTTTACAGAGGCGATCATAGCGACGGACAGGCGTTCGACGGGGTGTTGGGGGTTTTGGCGCATTCTTTTTCCCCCGAGATTGGGAGGCTGCACTTGGATGCGGCGGAGACGTGGGCGGTGGATTTCGAAAAGGAGAAATCAGCGGTGGCAGTTGATCTGGAATCGGTGGCGACGCATGAGATTGGTCATTTGTTGGGGCTTGGTCACAGCTCGGTGAGGGAATCGGTGATGTACCCAAGTTTGAAGCCGAGGGAAAAGAAGGCGAACTTGGAAGTGGACGACGTGGAAGGCGTGCAAGCTCTGTACGGATCGAATCCGAATTTCAAGTTTGAGTCTTTGGAATTGGAGTCTGATACGTCTGACACTCAGCCACCTGTTTCCACGTGTACAATGGCATGCCCTTTTTCACTTCCCTTCTTCTTCCTAATTTTCCCTTACCATTTTTTTCTTTTTCCATAAGGATCTCACTTAACAAATATATTCTTGCAAACAACATTCTATTTAAAAGTTCATTATCTTCAAACTTCAAATTATAAATTACAGAGAGCCGCATGAAGCTTATCGAGCGACATACACATACATACGGGATTAG

mRNA sequence

ATGCCGATGGTGCTCACGTACGCATTCTTCAAGGAGAATTGGATGAGCAACTTGAGTTTAAAAGACGTGAGAGCCGTATTTCGCAAGGCGTTTTCGAAATGGGCCCACGTGATTCCGGTGAGTTTTGAGGAGACCGACGACTATGGGTACGCCGATATTAAAATCGGGTTTTACAGAGGCGATCATAGCGACGGACAGGCGTTCGACGGGGTGTTGGGGGTTTTGGCGCATTCTTTTTCCCCCGAGATTGGGAGGCTGCACTTGGATGCGGCGGAGACGTGGGCGGTGGATTTCGAAAAGGAGAAATCAGCGGTGGCAGTTGATCTGGAATCGGTGGCGACGCATGAGATTGGTCATTTGTTGGGGCTTGGTCACAGCTCGGTGAGGGAATCGGTGATGTACCCAAGTTTGAAGCCGAGGGAAAAGAAGGCGAACTTGGAAGTGGACGACGTGGAAGGCGTGCAAGCTCTAGAGCCGCATGAAGCTTATCGAGCGACATACACATACATACGGGATTAG

Coding sequence (CDS)

ATGCCGATGGTGCTCACGTACGCATTCTTCAAGGAGAATTGGATGAGCAACTTGAGTTTAAAAGACGTGAGAGCCGTATTTCGCAAGGCGTTTTCGAAATGGGCCCACGTGATTCCGGTGAGTTTTGAGGAGACCGACGACTATGGGTACGCCGATATTAAAATCGGGTTTTACAGAGGCGATCATAGCGACGGACAGGCGTTCGACGGGGTGTTGGGGGTTTTGGCGCATTCTTTTTCCCCCGAGATTGGGAGGCTGCACTTGGATGCGGCGGAGACGTGGGCGGTGGATTTCGAAAAGGAGAAATCAGCGGTGGCAGTTGATCTGGAATCGGTGGCGACGCATGAGATTGGTCATTTGTTGGGGCTTGGTCACAGCTCGGTGAGGGAATCGGTGATGTACCCAAGTTTGAAGCCGAGGGAAAAGAAGGCGAACTTGGAAGTGGACGACGTGGAAGGCGTGCAAGCTCTAGAGCCGCATGAAGCTTATCGAGCGACATACACATACATACGGGATTAG

Protein sequence

MPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALEPHEAYRATYTYIRD

Homology

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BLAST of IVF0018143 vs. ExPASy Swiss-Prot
Match: Q8GWW6 (Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana OX=3702 GN=4MMP PE=1 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.5e-60
Identity = 112/157 (71.34%), Postives = 132/157 (84.08%), Query Frame = 0


Query: 1   MPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 60
           +P+ LTYAF +EN    L+  D+R VFR+AF KWA VIPVSF ET+DY  ADIKIGF+ G
Sbjct: 138 VPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKWASVIPVSFIETEDYVIADIKIGFFNG 197

Query: 61  DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 120
           DH DG+ FDGVLGVLAH+FSPE GRLHLD AETWAVDF++EKS+VAVDLESVA HEIGH+
Sbjct: 198 DHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEKSSVAVDLESVAVHEIGHV 257

Query: 121 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 158
           LGLGHSSV+++ MYP+LKPR KK NL +DDV GVQ+L
Sbjct: 258 LGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSL 294

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BLAST of IVF0018143 vs. ExPASy Swiss-Prot
Match: O23507 (Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 6.6e-53
Identity = 105/154 (68.18%), Postives = 121/154 (78.57%), Query Frame = 0


Query: 5   LTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRGDHSD 64
           LTYA  K + +  L+ +DV+ VFR+AFS+W+ VIPVSFEE DD+  AD+KIGFY GDH D
Sbjct: 164 LTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSFEEVDDFTTADLKIGFYAGDHGD 223

Query: 65  GQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE-KEKSAVAVDLESVATHEIGHLLGL 124
           G  FDGVLG LAH+F+PE GRLHLDAAETW VD + K  S VAVDLESVATHEIGHLLGL
Sbjct: 224 GLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKGSSEVAVDLESVATHEIGHLLGL 283

Query: 125 GHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 158
           GHSS   +VMYPSL+PR KK +L VDDV GV  L
Sbjct: 284 GHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKL 317

[Close]

BLAST of IVF0018143 vs. ExPASy Swiss-Prot
Match: O04529 (Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.9e-39
Identity = 81/156 (51.92%), Postives = 109/156 (69.87%), Query Frame = 0


Query: 5   LTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRGDHSD 64
           LTYAF  +N ++    ++V++VF +AF +W+ V  ++F  ++ +  +DI IGFY GDH D
Sbjct: 171 LTYAFDPKNPLT----EEVKSVFSRAFGRWSDVTALNFTLSESFSTSDITIGFYTGDHGD 230

Query: 65  GQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKE---KSAVAVDLESVATHEIGHLL 124
           G+ FDGVLG LAH+FSP  G+ HLDA E W V  + +       AVDLESVA HEIGHLL
Sbjct: 231 GEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDSFLSVTAAVDLESVAVHEIGHLL 290

Query: 125 GLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 158
           GLGHSSV ES+MYP++   ++K +L  DDVEG+Q L
Sbjct: 291 GLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYL 322

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BLAST of IVF0018143 vs. ExPASy Swiss-Prot
Match: Q5XF51 (Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.7e-37
Identity = 78/157 (49.68%), Postives = 103/157 (65.61%), Query Frame = 0


Query: 5   LTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRGDHSD 64
           LTYAF   N ++    ++V++VF +AF++W  V P++F   + +  +DI IGFY G+H D
Sbjct: 175 LTYAFDPRNALT----EEVKSVFSRAFTRWEEVTPLTFTRVERFSTSDISIGFYSGEHGD 234

Query: 65  GQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAV----AVDLESVATHEIGHL 124
           G+ FDG +  LAH+FSP  G  HLD  E W V  E     +    AVDLESVA HEIGHL
Sbjct: 235 GEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGFISVSEAVDLESVAVHEIGHL 294

Query: 125 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 158
           LGLGHSSV  S+MYP+++   +K +L  DDVEGVQ L
Sbjct: 295 LGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYL 327

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BLAST of IVF0018143 vs. ExPASy Swiss-Prot
Match: Q9ZUJ5 (Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.8e-35
Identity = 73/158 (46.20%), Postives = 104/158 (65.82%), Query Frame = 0


Query: 5   LTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRGDHSD 64
           LTYAF  +N +++    +V+ VF +AF++WA V P++F  ++    ADI IGF+ G+H D
Sbjct: 159 LTYAFAPQNNLTD----EVKRVFSRAFTRWAEVTPLNFTRSESILRADIVIGFFSGEHGD 218

Query: 65  GQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAV-----AVDLESVATHEIGH 124
           G+ FDG +G LAH+ SP  G LHLD  E W +   +    +      VDLESVA HEIGH
Sbjct: 219 GEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRRILPVTTVVDLESVAVHEIGH 278

Query: 125 LLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 158
           LLGLGHSSV +++M+P++   ++K  L  DD+EG+Q L
Sbjct: 279 LLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHL 312

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BLAST of IVF0018143 vs. ExPASy TrEMBL
Match: A0A5D3DB58 (Metalloendoproteinase 4-MMP OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00450 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.3e-83
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 60
           MPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG
Sbjct: 75  MPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 134

Query: 61  DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 120
           DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL
Sbjct: 135 DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 194

Query: 121 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 158
           LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL
Sbjct: 195 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 231

[Close]

BLAST of IVF0018143 vs. ExPASy TrEMBL
Match: A0A1S3AUH8 (metalloendoproteinase 4-MMP OS=Cucumis melo OX=3656 GN=LOC103483123 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.3e-83
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 60
           MPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG
Sbjct: 75  MPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 134

Query: 61  DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 120
           DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL
Sbjct: 135 DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 194

Query: 121 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 158
           LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL
Sbjct: 195 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 231

[Close]

BLAST of IVF0018143 vs. ExPASy TrEMBL
Match: A0A0A0L2Y8 (ZnMc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G117950 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 8.2e-83
Identity = 155/157 (98.73%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 60
           MPMVLTYAFFK+NWMSNLSL+DVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG
Sbjct: 64  MPMVLTYAFFKDNWMSNLSLEDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 123

Query: 61  DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 120
           DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL
Sbjct: 124 DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 183

Query: 121 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 158
           LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL
Sbjct: 184 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 220

[Close]

BLAST of IVF0018143 vs. ExPASy TrEMBL
Match: A0A6J1FZ72 (metalloendoproteinase 4-MMP-like OS=Cucurbita moschata OX=3662 GN=LOC111449256 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.1e-78
Identity = 147/157 (93.63%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 60
           MPMVLTYAFFKENW+SNLSLKDV+ VFR AFSKWAHVIPV FEET+DYG+ADIKIGFYRG
Sbjct: 69  MPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFADIKIGFYRG 128

Query: 61  DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 120
           DH DGQ FDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE+EKSAVAVDLESVATHEIGHL
Sbjct: 129 DHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESVATHEIGHL 188

Query: 121 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 158
           LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL
Sbjct: 189 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 225

[Close]

BLAST of IVF0018143 vs. ExPASy TrEMBL
Match: A0A6J1IFQ0 (metalloendoproteinase 4-MMP-like OS=Cucurbita maxima OX=3661 GN=LOC111472903 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.0e-77
Identity = 146/157 (92.99%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 60
           MPMVLTYAF KENW+SNLSLKDV+ VFR AFSKWAHVIPV FEET+DYG+ADIKIGFYRG
Sbjct: 69  MPMVLTYAFLKENWISNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFADIKIGFYRG 128

Query: 61  DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 120
           DH DGQ FDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE+EKSAVAVDLESVATHEIGHL
Sbjct: 129 DHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESVATHEIGHL 188

Query: 121 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 158
           LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL
Sbjct: 189 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 225

[Close]

BLAST of IVF0018143 vs. NCBI nr
Match: XP_008437790.1 (PREDICTED: metalloendoproteinase 4-MMP [Cucumis melo] >KAA0048832.1 metalloendoproteinase 4-MMP [Cucumis melo var. makuwa] >TYK20784.1 metalloendoproteinase 4-MMP [Cucumis melo var. makuwa])

HSP 1 Score: 318 bits (816), Expect = 1.46e-107
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 60
           MPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG
Sbjct: 75  MPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 134

Query: 61  DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 120
           DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL
Sbjct: 135 DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 194

Query: 121 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 157
           LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL
Sbjct: 195 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 231

[Close]

BLAST of IVF0018143 vs. NCBI nr
Match: KAE8650215.1 (hypothetical protein Csa_010775 [Cucumis sativus])

HSP 1 Score: 316 bits (809), Expect = 7.22e-107
Identity = 155/157 (98.73%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 60
           MPMVLTYAFFK+NWMSNLSL+DVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG
Sbjct: 64  MPMVLTYAFFKDNWMSNLSLEDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 123

Query: 61  DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 120
           DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL
Sbjct: 124 DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 183

Query: 121 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 157
           LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL
Sbjct: 184 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 220

[Close]

BLAST of IVF0018143 vs. NCBI nr
Match: XP_011650638.1 (metalloendoproteinase 4-MMP [Cucumis sativus])

HSP 1 Score: 316 bits (809), Expect = 1.05e-106
Identity = 155/157 (98.73%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 60
           MPMVLTYAFFK+NWMSNLSL+DVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG
Sbjct: 64  MPMVLTYAFFKDNWMSNLSLEDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 123

Query: 61  DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 120
           DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL
Sbjct: 124 DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 183

Query: 121 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 157
           LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL
Sbjct: 184 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 220

[Close]

BLAST of IVF0018143 vs. NCBI nr
Match: XP_038903989.1 (metalloendoproteinase 4-MMP-like [Benincasa hispida])

HSP 1 Score: 312 bits (799), Expect = 5.07e-105
Identity = 153/157 (97.45%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 60
           MPMVLTYAFF+ENW+SNLSLKDVRAVFRKAFSKWAHVIPV FEETDDYGYADIKIGFYRG
Sbjct: 72  MPMVLTYAFFEENWISNLSLKDVRAVFRKAFSKWAHVIPVRFEETDDYGYADIKIGFYRG 131

Query: 61  DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 120
           DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETW VDFEKEKSAVAVDLESVATHEIGHL
Sbjct: 132 DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWTVDFEKEKSAVAVDLESVATHEIGHL 191

Query: 121 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 157
           LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL
Sbjct: 192 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 228

[Close]

BLAST of IVF0018143 vs. NCBI nr
Match: KAG6597028.1 (Metalloendoproteinase 4-MMP, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 302 bits (774), Expect = 1.25e-101
Identity = 152/171 (88.89%), Postives = 157/171 (91.81%), Query Frame = 0


Query: 1   MPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 60
           MPMVLTYAFFKENW+SNLSLKDV+ VFR AFSKWAHVIPV FEET+DYG+ADIKIGFYRG
Sbjct: 69  MPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFADIKIGFYRG 128

Query: 61  DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 120
           DH DGQ FDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE+EKSAVAVDLESVATHEIGHL
Sbjct: 129 DHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESVATHEIGHL 188

Query: 121 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALEPHEAY--RATYTY 169
           LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL        RA YTY
Sbjct: 189 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRRAHYTY 239

[Close]

BLAST of IVF0018143 vs. TAIR 10
Match: AT2G45040.1 (Matrixin family protein )

HSP 1 Score: 233.8 bits (595), Expect = 1.0e-61
Identity = 112/157 (71.34%), Postives = 132/157 (84.08%), Query Frame = 0


Query: 1   MPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 60
           +P+ LTYAF +EN    L+  D+R VFR+AF KWA VIPVSF ET+DY  ADIKIGF+ G
Sbjct: 138 VPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKWASVIPVSFIETEDYVIADIKIGFFNG 197

Query: 61  DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 120
           DH DG+ FDGVLGVLAH+FSPE GRLHLD AETWAVDF++EKS+VAVDLESVA HEIGH+
Sbjct: 198 DHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEKSSVAVDLESVAVHEIGHV 257

Query: 121 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 158
           LGLGHSSV+++ MYP+LKPR KK NL +DDV GVQ+L
Sbjct: 258 LGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSL 294

[Close]

BLAST of IVF0018143 vs. TAIR 10
Match: AT4G16640.1 (Matrixin family protein )

HSP 1 Score: 208.4 bits (529), Expect = 4.7e-54
Identity = 105/154 (68.18%), Postives = 121/154 (78.57%), Query Frame = 0


Query: 5   LTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRGDHSD 64
           LTYA  K + +  L+ +DV+ VFR+AFS+W+ VIPVSFEE DD+  AD+KIGFY GDH D
Sbjct: 164 LTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSFEEVDDFTTADLKIGFYAGDHGD 223

Query: 65  GQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE-KEKSAVAVDLESVATHEIGHLLGL 124
           G  FDGVLG LAH+F+PE GRLHLDAAETW VD + K  S VAVDLESVATHEIGHLLGL
Sbjct: 224 GLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKGSSEVAVDLESVATHEIGHLLGL 283

Query: 125 GHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 158
           GHSS   +VMYPSL+PR KK +L VDDV GV  L
Sbjct: 284 GHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKL 317

[Close]

BLAST of IVF0018143 vs. TAIR 10
Match: AT1G70170.1 (matrix metalloproteinase )

HSP 1 Score: 163.7 bits (413), Expect = 1.3e-40
Identity = 81/156 (51.92%), Postives = 109/156 (69.87%), Query Frame = 0


Query: 5   LTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRGDHSD 64
           LTYAF  +N ++    ++V++VF +AF +W+ V  ++F  ++ +  +DI IGFY GDH D
Sbjct: 171 LTYAFDPKNPLT----EEVKSVFSRAFGRWSDVTALNFTLSESFSTSDITIGFYTGDHGD 230

Query: 65  GQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKE---KSAVAVDLESVATHEIGHLL 124
           G+ FDGVLG LAH+FSP  G+ HLDA E W V  + +       AVDLESVA HEIGHLL
Sbjct: 231 GEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDSFLSVTAAVDLESVAVHEIGHLL 290

Query: 125 GLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 158
           GLGHSSV ES+MYP++   ++K +L  DDVEG+Q L
Sbjct: 291 GLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYL 322

[Close]

BLAST of IVF0018143 vs. TAIR 10
Match: AT1G24140.1 (Matrixin family protein )

HSP 1 Score: 157.1 bits (396), Expect = 1.2e-38
Identity = 78/157 (49.68%), Postives = 103/157 (65.61%), Query Frame = 0


Query: 5   LTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRGDHSD 64
           LTYAF   N ++    ++V++VF +AF++W  V P++F   + +  +DI IGFY G+H D
Sbjct: 175 LTYAFDPRNALT----EEVKSVFSRAFTRWEEVTPLTFTRVERFSTSDISIGFYSGEHGD 234

Query: 65  GQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAV----AVDLESVATHEIGHL 124
           G+ FDG +  LAH+FSP  G  HLD  E W V  E     +    AVDLESVA HEIGHL
Sbjct: 235 GEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGFISVSEAVDLESVAVHEIGHL 294

Query: 125 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 158
           LGLGHSSV  S+MYP+++   +K +L  DDVEGVQ L
Sbjct: 295 LGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYL 327

[Close]

BLAST of IVF0018143 vs. TAIR 10
Match: AT1G59970.1 (Matrixin family protein )

HSP 1 Score: 149.8 bits (377), Expect = 2.0e-36
Identity = 73/158 (46.20%), Postives = 104/158 (65.82%), Query Frame = 0


Query: 5   LTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRGDHSD 64
           LTYAF  +N +++    +V+ VF +AF++WA V P++F  ++    ADI IGF+ G+H D
Sbjct: 159 LTYAFAPQNNLTD----EVKRVFSRAFTRWAEVTPLNFTRSESILRADIVIGFFSGEHGD 218

Query: 65  GQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAV-----AVDLESVATHEIGH 124
           G+ FDG +G LAH+ SP  G LHLD  E W +   +    +      VDLESVA HEIGH
Sbjct: 219 GEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRRILPVTTVVDLESVAVHEIGH 278

Query: 125 LLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQAL 158
           LLGLGHSSV +++M+P++   ++K  L  DD+EG+Q L
Sbjct: 279 LLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHL 312

The following BLAST results are available for this feature:

BLAST of IVF0018143 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWW6	1.5e-60	71.34	Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana OX=3702 GN=4MMP PE=1 SV=1	[more]
O23507	6.6e-53	68.18	Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1	[more]
O04529	1.9e-39	51.92	Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1	[more]
Q5XF51	1.7e-37	49.68	Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1	[more]
Q9ZUJ5	2.8e-35	46.20	Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1	[more]

BLAST of IVF0018143 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DB58	1.3e-83	100.00	Metalloendoproteinase 4-MMP OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3AUH8	1.3e-83	100.00	metalloendoproteinase 4-MMP OS=Cucumis melo OX=3656 GN=LOC103483123 PE=4 SV=1	[more]
A0A0A0L2Y8	8.2e-83	98.73	ZnMc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G117950 PE=4 S...	[more]
A0A6J1FZ72	2.1e-78	93.63	metalloendoproteinase 4-MMP-like OS=Cucurbita moschata OX=3662 GN=LOC111449256 P...	[more]
A0A6J1IFQ0	1.0e-77	92.99	metalloendoproteinase 4-MMP-like OS=Cucurbita maxima OX=3661 GN=LOC111472903 PE=...	[more]

BLAST of IVF0018143 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437790.1	1.46e-107	100.00	PREDICTED: metalloendoproteinase 4-MMP [Cucumis melo] >KAA0048832.1 metalloendop...	[more]
KAE8650215.1	7.22e-107	98.73	hypothetical protein Csa_010775 [Cucumis sativus]	[more]
XP_011650638.1	1.05e-106	98.73	metalloendoproteinase 4-MMP [Cucumis sativus]	[more]
XP_038903989.1	5.07e-105	97.45	metalloendoproteinase 4-MMP-like [Benincasa hispida]	[more]
KAG6597028.1	1.25e-101	88.89	Metalloendoproteinase 4-MMP, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of IVF0018143 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45040.1	1.0e-61	71.34	Matrixin family protein	[more]
AT4G16640.1	4.7e-54	68.18	Matrixin family protein	[more]
AT1G70170.1	1.3e-40	51.92	matrix metalloproteinase	[more]
AT1G24140.1	1.2e-38	49.68	Matrixin family protein	[more]
AT1G59970.1	2.0e-36	46.20	Matrixin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021190	Peptidase M10A	PRINTS	PR00138	MATRIXIN	coord: 146..159 score: 44.6 coord: 51..79 score: 53.24 coord: 27..42 score: 41.31 coord: 112..137 score: 55.77
IPR006026	Peptidase, metallopeptidase	SMART	SM00235	col_5	coord: 4..160 e-value: 1.3E-31 score: 121.1
IPR024079	Metallopeptidase, catalytic domain superfamily	GENE3D	3.40.390.10	Collagenase (Catalytic Domain)	coord: 2..159 e-value: 1.9E-49 score: 170.2
IPR001818	Peptidase M10, metallopeptidase	PFAM	PF00413	Peptidase_M10	coord: 5..157 e-value: 1.5E-46 score: 158.1
None	No IPR available	PANTHER	PTHR10201	MATRIX METALLOPROTEINASE	coord: 2..157
None	No IPR available	PANTHER	PTHR10201:SF245	METALLOENDOPROTEINASE 4-MMP	coord: 2..157
None	No IPR available	SUPERFAMILY	55486	Metalloproteases ("zincins"), catalytic domain	coord: 8..157
IPR033739	Peptidase M10A, catalytic domain	CDD	cd04278	ZnMc_MMP	coord: 5..157 e-value: 1.84864E-62 score: 188.182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0018143.1	IVF0018143.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030574	collagen catabolic process
biological_process	GO:0030198	extracellular matrix organization
biological_process	GO:0006508	proteolysis
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0031012	extracellular matrix
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0008237	metallopeptidase activity