IVF0018094 (gene) Melon (IVF77) v1

Overview
NameIVF0018094
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionJosephin-like protein
Locationchr11: 19603533 .. 19604499 (+)
RNA-Seq ExpressionIVF0018094
SyntenyIVF0018094
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCCACTAAAATGCAATAGAGGACGAAATGATTATTGCTATATTTATGGTTTTGTTTATTATTTGATGCCAATTTGTTGATTTCTACCATTTCAGTACCTACTTCATGCGTGCAAAGCTTTCTATATTCTCTGTTTATCTTGACATCCGCATAAAGTTCATCATGTCTTTAGCTGTTGGATCAAATATTTAACGGTTGAGATCGTTTGATTAATAAAGTGTTAGCCCTTATATTGAATTGAATGACCCTCACTCTTGTTTGTTGCTTCATTGAAATTTAATACACAAAAACAAACAGAGCCTTGTTGAGAGTTTGCTTAAGAACGCTTGGTGGGCAGGCTGCATTTTTCAATCTCTCTTTTTCCTTCTTTACTTTCTCCTCAGTTTGGTATTCCATTTCATTTTAATCTCTCTCTCTCTCTCATTCTTTCTCTCACTCTTGGCTCAGACCTTTCTTCTAATTGGCTATGACGACGACAACATTGGAGCAGAAGGTTAAGAAACCGAACTCCTCCAGCAACAACAACAGAACTGGGAGAAGCACTTTTCAAAAGTGTAGATTTCGATCCCCCAAATCCCTTAAAGGACTGCAATTCTCTCCACTGTGCTTTCTAAAGCACCTAGCCGATAAAGTGACTCGAGCTTTGCATTTCATGGCTATGAAGAGAAATCGACCCCTTCAAAAACAACCTGTTCCGGCCGTGCCCCTTGCGAGTTCGAAGGCAATCCAGGTCCCGGCCACCGTCGATTCGCATAGAACAGAGGCTGTGGAGGACTGCATCAAGTACATCAACGCTTCCACTTAGCTCACACCAAATTCTTCTAAGATTTTCTCCTGAAAGTGCGTATATATGTCGGGGTTTTGTGGGTTTTAATGTTTGATATCATATTGGTGTGGATCATGAAATATATGATGCAATATGTTCTTTGTTTAGATGAAAATTTTGGGGAATTTGAAAACGTCCATT

mRNA sequence

GTCCACTAAAATGCAATAGAGGACGAAATGATTATTGCTATATTTATGGTTTTGTTTATTATTTGATGCCAATTTGTTGATTTCTACCATTTCAGTACCTACTTCATGCGTGCAAAGCTTTCTATATTCTCTGTTTATCTTGACATCCGCATAAAGTTCATCATGTCTTTAGCTGTTGGATCAAATATTTAACGGTTGAGATCGTTTGATTAATAAAGTGTTAGCCCTTATATTGAATTGAATGACCCTCACTCTTGTTTGTTGCTTCATTGAAATTTAATACACAAAAACAAACAGAGCCTTGTTGAGAGTTTGCTTAAGAACGCTTGGTGGGCAGGCTGCATTTTTCAATCTCTCTTTTTCCTTCTTTACTTTCTCCTCAGTTTGGTATTCCATTTCATTTTAATCTCTCTCTCTCTCTCATTCTTTCTCTCACTCTTGGCTCAGACCTTTCTTCTAATTGGCTATGACGACGACAACATTGGAGCAGAAGGTTAAGAAACCGAACTCCTCCAGCAACAACAACAGAACTGGGAGAAGCACTTTTCAAAAGTGTAGATTTCGATCCCCCAAATCCCTTAAAGGACTGCAATTCTCTCCACTGTGCTTTCTAAAGCACCTAGCCGATAAAGTGACTCGAGCTTTGCATTTCATGGCTATGAAGAGAAATCGACCCCTTCAAAAACAACCTGTTCCGGCCGTGCCCCTTGCGAGTTCGAAGGCAATCCAGGTCCCGGCCACCGTCGATTCGCATAGAACAGAGGCTGTGGAGGACTGCATCAAGTACATCAACGCTTCCACTTAGCTCACACCAAATTCTTCTAAGATTTTCTCCTGAAAGTGCGTATATATGTCGGGGTTTTGTGGGTTTTAATGTTTGATATCATATTGGTGTGGATCATGAAATATATGATGCAATATGTTCTTTGTTTAGATGAAAATTTTGGGGAATTTGAAAACGTCCATT

Coding sequence (CDS)

ATGACGACGACAACATTGGAGCAGAAGGTTAAGAAACCGAACTCCTCCAGCAACAACAACAGAACTGGGAGAAGCACTTTTCAAAAGTGTAGATTTCGATCCCCCAAATCCCTTAAAGGACTGCAATTCTCTCCACTGTGCTTTCTAAAGCACCTAGCCGATAAAGTGACTCGAGCTTTGCATTTCATGGCTATGAAGAGAAATCGACCCCTTCAAAAACAACCTGTTCCGGCCGTGCCCCTTGCGAGTTCGAAGGCAATCCAGGTCCCGGCCACCGTCGATTCGCATAGAACAGAGGCTGTGGAGGACTGCATCAAGTACATCAACGCTTCCACTTAG

Protein sequence

MTTTTLEQKVKKPNSSSNNNRTGRSTFQKCRFRSPKSLKGLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQPVPAVPLASSKAIQVPATVDSHRTEAVEDCIKYINAST
Homology
BLAST of IVF0018094 vs. ExPASy TrEMBL
Match: A0A5A7V4L5 (Josephin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00520 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.5e-53
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0

Query: 1   MTTTTLEQKVKKPNSSSNNNRTGRSTFQKCRFRSPKSLKGLQFSPLCFLKHLADKVTRAL 60
           MTTTTLEQKVKKPNSSSNNNRTGRSTFQKCRFRSPKSLKGLQFSPLCFLKHLADKVTRAL
Sbjct: 1   MTTTTLEQKVKKPNSSSNNNRTGRSTFQKCRFRSPKSLKGLQFSPLCFLKHLADKVTRAL 60

Query: 61  HFMAMKRNRPLQKQPVPAVPLASSKAIQVPATVDSHRTEAVEDCIKYINAST 113
           HFMAMKRNRPLQKQPVPAVPLASSKAIQVPATVDSHRTEAVEDCIKYINAST
Sbjct: 61  HFMAMKRNRPLQKQPVPAVPLASSKAIQVPATVDSHRTEAVEDCIKYINAST 112

BLAST of IVF0018094 vs. ExPASy TrEMBL
Match: A0A0A0KE45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G187920 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.2e-45
Identity = 103/111 (92.79%), Postives = 106/111 (95.50%), Query Frame = 0

Query: 3   TTTLEQKVKKPNSSSNNNRTGRSTFQKCRFRSPKSLKGLQFSPLCFLKHLADKVTRALHF 62
           TTTLEQKVKKPNSSS NNRTGRSTFQKCRF SPKSLK LQFSPLCFLKHLADKVTRALHF
Sbjct: 2   TTTLEQKVKKPNSSS-NNRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHF 61

Query: 63  MAMKRNRPLQKQPVP-AVPLASSKAIQVPATVDSHRTEAVEDCIKYINAST 113
           MAMKRNRPLQKQ VP AVP+ASSKA+QVPAT+DSHRTEAVEDCIKYINAST
Sbjct: 62  MAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAVEDCIKYINAST 111

BLAST of IVF0018094 vs. ExPASy TrEMBL
Match: A0A6A1VD78 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR6G009091 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.5e-08
Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 0

Query: 28  QKCRFRSPKSLKGLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQPVPAVPLASSKAI 87
           Q CRF+ PK  +     P+ FLKH+ADK+ RALH  +++R+     Q        SSK I
Sbjct: 27  QYCRFKLPKGPE----LPIRFLKHIADKIARALHSASLRRS-----QSAKDSSFGSSKPI 86

Query: 88  QVPATVDSHRTEAVEDCIKYINAST 113
            V  TVDSHRTEA+EDCI+++N+S+
Sbjct: 87  -VAMTVDSHRTEAIEDCIEFLNSSS 101

BLAST of IVF0018094 vs. ExPASy TrEMBL
Match: A0A5D2PS21 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A07G119200v1 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.4e-06
Identity = 38/95 (40.00%), Postives = 53/95 (55.79%), Query Frame = 0

Query: 17  SNNNRTGRSTFQKCRFRSPKSLKGLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQPV 76
           SN +  G     + R       K  +FSP+ FLKHL  K+ R LH ++MK       +P 
Sbjct: 22  SNTSAAGNKGVPRSRSYGFMRCKTSKFSPVRFLKHLGGKLARGLHVVSMK------IRPS 81

Query: 77  PAVPLASSKAIQVPATVDSHRTEAVEDCIKYINAS 112
           P V  +S ++     TVDSHRT A+EDCI++IN+S
Sbjct: 82  PKVSSSSGRSKPFLTTVDSHRTAAIEDCIEFINSS 110

BLAST of IVF0018094 vs. ExPASy TrEMBL
Match: A0A7J8WHN2 (Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_016154 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 4.1e-06
Identity = 38/95 (40.00%), Postives = 52/95 (54.74%), Query Frame = 0

Query: 17  SNNNRTGRSTFQKCRFRSPKSLKGLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQPV 76
           SN + TG     + R       K  +FSP+ FLKHL  K+ R LH ++MK  +       
Sbjct: 22  SNTSATGNKGVPRSRSYGFMRCKTSKFSPVRFLKHLGGKLARGLHVVSMKIRQS------ 81

Query: 77  PAVPLASSKAIQVPATVDSHRTEAVEDCIKYINAS 112
           P V  +S ++      VDSHRT AVEDCI++IN+S
Sbjct: 82  PKVSSSSGRSKPFVTPVDSHRTAAVEDCIEFINSS 110

BLAST of IVF0018094 vs. NCBI nr
Match: KAA0061847.1 (josephin-like protein [Cucumis melo var. makuwa] >TYK15409.1 josephin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 218 bits (555), Expect = 2.34e-71
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0

Query: 1   MTTTTLEQKVKKPNSSSNNNRTGRSTFQKCRFRSPKSLKGLQFSPLCFLKHLADKVTRAL 60
           MTTTTLEQKVKKPNSSSNNNRTGRSTFQKCRFRSPKSLKGLQFSPLCFLKHLADKVTRAL
Sbjct: 1   MTTTTLEQKVKKPNSSSNNNRTGRSTFQKCRFRSPKSLKGLQFSPLCFLKHLADKVTRAL 60

Query: 61  HFMAMKRNRPLQKQPVPAVPLASSKAIQVPATVDSHRTEAVEDCIKYINAST 112
           HFMAMKRNRPLQKQPVPAVPLASSKAIQVPATVDSHRTEAVEDCIKYINAST
Sbjct: 61  HFMAMKRNRPLQKQPVPAVPLASSKAIQVPATVDSHRTEAVEDCIKYINAST 112

BLAST of IVF0018094 vs. NCBI nr
Match: KGN47099.1 (hypothetical protein Csa_020767 [Cucumis sativus])

HSP 1 Score: 192 bits (488), Expect = 3.76e-61
Identity = 103/111 (92.79%), Postives = 106/111 (95.50%), Query Frame = 0

Query: 3   TTTLEQKVKKPNSSSNNNRTGRSTFQKCRFRSPKSLKGLQFSPLCFLKHLADKVTRALHF 62
           TTTLEQKVKKPNSSSNN RTGRSTFQKCRF SPKSLK LQFSPLCFLKHLADKVTRALHF
Sbjct: 2   TTTLEQKVKKPNSSSNN-RTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHF 61

Query: 63  MAMKRNRPLQKQPVPA-VPLASSKAIQVPATVDSHRTEAVEDCIKYINAST 112
           MAMKRNRPLQKQ VPA VP+ASSKA+QVPAT+DSHRTEAVEDCIKYINAST
Sbjct: 62  MAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAVEDCIKYINAST 111

BLAST of IVF0018094 vs. NCBI nr
Match: XP_038902310.1 (uncharacterized protein LOC120088944 [Benincasa hispida])

HSP 1 Score: 146 bits (368), Expect = 6.49e-43
Identity = 83/110 (75.45%), Postives = 87/110 (79.09%), Query Frame = 0

Query: 3   TTTLEQKVKKPNSSSNNNRTGRSTFQKCRFRSPKSLKGLQFSPLCFLKHLADKVTRALHF 62
           TTTLE  + K NSSSN    GR  FQKCRFRSPKSLKGLQFSPL FLK LAD+V RALH 
Sbjct: 2   TTTLE--IDKQNSSSNKTERGRGAFQKCRFRSPKSLKGLQFSPLSFLKCLADRVARALHL 61

Query: 63  MAMKRNRPLQKQPVPAVPLASSKAIQVPATVDSHRTEAVEDCIKYINAST 112
           MAMKR RP  KQP PAVP+ SSK IQ  A +DSHRTEAVEDCIKYINAST
Sbjct: 62  MAMKR-RPCHKQPAPAVPVVSSKPIQASA-IDSHRTEAVEDCIKYINAST 107

BLAST of IVF0018094 vs. NCBI nr
Match: KAG6570666.1 (hypothetical protein SDJN03_29581, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 129 bits (325), Expect = 2.36e-36
Identity = 73/112 (65.18%), Postives = 88/112 (78.57%), Query Frame = 0

Query: 1   MTTTTLEQKVKKPNSSSNNNRTGRSTFQKCRFRSPKSLKGLQFSPLCFLKHLADKVTRAL 60
           MTT T+EQ+++K N SSN  R    +F+K RF   KSLKGLQFSPL FLKHLA+KVTRA 
Sbjct: 1   MTTATMEQRIEKRNMSSNATRRSTGSFRKLRF---KSLKGLQFSPLSFLKHLANKVTRAW 60

Query: 61  HFMAMKRNRPLQKQPVPAVPLASSKAIQVPATVDSHRTEAVEDCIKYINAST 112
           H MAMKR    ++QPVPA+P+A+SK + V A VDSHRTEAVEDCIKYIN+S+
Sbjct: 61  HLMAMKRRPHHEQQPVPAMPVATSKPLPVSA-VDSHRTEAVEDCIKYINSSS 108

BLAST of IVF0018094 vs. NCBI nr
Match: KAG7010513.1 (Josephin-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 118 bits (296), Expect = 7.60e-30
Identity = 67/104 (64.42%), Postives = 81/104 (77.88%), Query Frame = 0

Query: 9   KVKKPNSSSNNNRTGRSTFQKCRFRSPKSLKGLQFSPLCFLKHLADKVTRALHFMAMKRN 68
           +++K N SSN  R    +F+K RF   KSLKGLQFSPL FLKHLA+KVTRA H MAMKR 
Sbjct: 195 RIEKRNMSSNATRRSTGSFRKLRF---KSLKGLQFSPLSFLKHLANKVTRAWHLMAMKRR 254

Query: 69  RPLQKQPVPAVPLASSKAIQVPATVDSHRTEAVEDCIKYINAST 112
              ++QPVPA+P+A+SK + V A VDSHRTEAVEDCIKYIN+S+
Sbjct: 255 PHHEQQPVPAMPVATSKPLPVSA-VDSHRTEAVEDCIKYINSSS 294

BLAST of IVF0018094 vs. TAIR 10
Match: AT1G07300.1 (josephin protein-related )

HSP 1 Score: 43.5 bits (101), Expect = 1.3e-04
Identity = 26/83 (31.33%), Postives = 43/83 (51.81%), Query Frame = 0

Query: 30  CRFRSPKSLKGLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQPVPAVPLASSKAIQV 89
           C  R P+     + +    +KHL  K  + L  + M++ +      V +    S   I +
Sbjct: 41  CGLRLPRK---TEVTAAKLIKHLGCKFAKGLRLVVMRKKKRSPPSKVSSFSGRSQPPI-I 100

Query: 90  PATVDSHRTEAVEDCIKYINAST 113
           P   DSHR+EA+EDCI++IN+S+
Sbjct: 101 PINNDSHRSEAIEDCIQFINSSS 119

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V4L51.5e-53100.00Josephin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold57... [more]
A0A0A0KE451.2e-4592.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G187920 PE=4 SV=1[more]
A0A6A1VD782.5e-0847.06Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR6G009091 PE=4 SV=1[more]
A0A5D2PS211.4e-0640.00Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A07G119200v1 P... [more]
A0A7J8WHN24.1e-0640.00Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_016154 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0061847.12.34e-71100.00josephin-like protein [Cucumis melo var. makuwa] >TYK15409.1 josephin-like prote... [more]
KGN47099.13.76e-6192.79hypothetical protein Csa_020767 [Cucumis sativus][more]
XP_038902310.16.49e-4375.45uncharacterized protein LOC120088944 [Benincasa hispida][more]
KAG6570666.12.36e-3665.18hypothetical protein SDJN03_29581, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7010513.17.60e-3064.42Josephin-like protein [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
AT1G07300.11.3e-0431.33josephin protein-related [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availablePANTHERPTHR34355JOSEPHIN-LIKE PROTEINcoord: 7..112
NoneNo IPR availablePANTHERPTHR34355:SF7JOSEPHIN PROTEIN-LIKE PROTEINcoord: 7..112

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0018094.1IVF0018094.1mRNA