IVF0018092 (gene) Melon (IVF77) v1

Overview


Name	IVF0018092
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	RING-H2 finger protein ATL66-like
Location	chr12: 1825633 .. 1826070 (-)
RNA-Seq Expression	IVF0018092
Synteny	IVF0018092

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGGTATCGAAGCCCTTTTTGATGACTATGATGTTGTGGCAGCCATATGTTTCGCCATTATAGTCTACTTCATCTCCTTCACTCTCTACTTCAAAACCGGAAATAATGATTATCAATCTGATCAATCCGACGTTGGGACGGTCGAAGAATTGCCAGCGTTTCGAGAGCGGGTGGTTCGAGATCAGCAGGAGATTGTACAGATTGAGGCAATGGTTTTCAGTTACAGGGAAGCTAAGAGAAGTGAGAATGATGATGATGATGATGATGATTATGAATGTGTGATTTGCTTGAATAAATTCGAAGATGCCCAAAAGTGCCGGTGGATGAAAAAGTGTGGTCATATATTTCATCGTAGCTGTATCGATCGGTGGCTCAAGACGGAGCGAGAATGTCCGCTTTGCCGAACCTGCGTTTGCGTCGTCGTCAAACCATAA

mRNA sequence

ATGAACGGTATCGAAGCCCTTTTTGATGACTATGATGTTGTGGCAGCCATATGTTTCGCCATTATAGTCTACTTCATCTCCTTCACTCTCTACTTCAAAACCGGAAATAATGATTATCAATCTGATCAATCCGACGTTGGGACGGTCGAAGAATTGCCAGCGTTTCGAGAGCGGGTGGTTCGAGATCAGCAGGAGATTGTACAGATTGAGGCAATGGTTTTCAGTTACAGGGAAGCTAAGAGAAGTGAGAATGATGATGATGATGATGATGATTATGAATGTGTGATTTGCTTGAATAAATTCGAAGATGCCCAAAAGTGCCGGTGGATGAAAAAGTGTGGTCATATATTTCATCGTAGCTGTATCGATCGGTGGCTCAAGACGGAGCGAGAATGTCCGCTTTGCCGAACCTGCGTTTGCGTCGTCGTCAAACCATAA

Coding sequence (CDS)

ATGAACGGTATCGAAGCCCTTTTTGATGACTATGATGTTGTGGCAGCCATATGTTTCGCCATTATAGTCTACTTCATCTCCTTCACTCTCTACTTCAAAACCGGAAATAATGATTATCAATCTGATCAATCCGACGTTGGGACGGTCGAAGAATTGCCAGCGTTTCGAGAGCGGGTGGTTCGAGATCAGCAGGAGATTGTACAGATTGAGGCAATGGTTTTCAGTTACAGGGAAGCTAAGAGAAGTGAGAATGATGATGATGATGATGATGATTATGAATGTGTGATTTGCTTGAATAAATTCGAAGATGCCCAAAAGTGCCGGTGGATGAAAAAGTGTGGTCATATATTTCATCGTAGCTGTATCGATCGGTGGCTCAAGACGGAGCGAGAATGTCCGCTTTGCCGAACCTGCGTTTGCGTCGTCGTCAAACCATAA

Protein sequence

MNGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEELPAFRERVVRDQQEIVQIEAMVFSYREAKRSENDDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHRSCIDRWLKTERECPLCRTCVCVVVKP

Homology

[Close]

BLAST of IVF0018092 vs. ExPASy Swiss-Prot
Match: Q9LRB7 (E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5.1 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.2e-12
Identity = 29/67 (43.28%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 79  AKRSENDDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHRSCIDRWLKTERECPLCRTC 138
           A   E +++DDD  EC +CL + ED ++ R++ +CGH FH  C+D WL +   CPLCR  
Sbjct: 119 AAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLT 178

Query: 139 VCVVVKP 146
           V V   P
Sbjct: 179 VVVPPPP 185

[Close]

BLAST of IVF0018092 vs. ExPASy Swiss-Prot
Match: Q9SRM0 (RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.5e-10
Identity = 38/127 (29.92%), Postives = 61/127 (48.03%), Query Frame = 0


Query: 15  AAICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEELPAFRERVVRDQQEIVQIEAMVF 74
           A   F+++++F   TLY         S      + + L   R   + D  EI  +  ++ 
Sbjct: 36  ALALFSVVLFFALLTLYIHRNCLPRDSINLHASSPDRLTRCRSGGL-DPAEIRSLPVVLC 95

Query: 75  SYREAKRSENDDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHRSCIDRWLKTERECPL 134
               A       +++++ EC ICL  FE+ +K + +  C H +H  C+DRWLKTE  CPL
Sbjct: 96  RRERA-------EEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPL 154

Query: 135 CRTCVCV 142
           CR  + V
Sbjct: 156 CRVSIRV 154

[Close]

BLAST of IVF0018092 vs. ExPASy Swiss-Prot
Match: Q9XF92 (Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH1 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.5e-10
Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 0


Query: 88  DDDDYECVICLNKFEDAQKCRWMKKCGHIFHRSCIDRWL-KTERECPLCRT 138
           +D    C +CL +FE  Q+ RW++ C HIFHRSC+DRW+   ++ CPLCRT
Sbjct: 88  EDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHDQKTCPLCRT 138

[Close]

BLAST of IVF0018092 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 5.8e-10
Identity = 31/78 (39.74%), Postives = 43/78 (55.13%), Query Frame = 0


Query: 62  DQQEIVQIEAMVFSYREAKRSENDDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHRSC 121
           D+  I  I    F  R+    E +D   +  EC +CLN+F++ +K R +  C H+FH  C
Sbjct: 103 DESAIRAIPVFKFKKRDVVAGE-EDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDC 162

Query: 122 IDRWLKTERECPLCRTCV 140
           ID WL+    CPLCRT V
Sbjct: 163 IDIWLQGNANCPLCRTSV 179

[Close]

BLAST of IVF0018092 vs. ExPASy Swiss-Prot
Match: Q9P7E1 (Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBP4H10.07 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 5.8e-10
Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = 0


Query: 91  DYECVICLNKFEDAQKCRWMKKCGHIFHRSCIDRWL-KTERECPLCRT 138
           D  C++CL+ FE   +CR +K+C H FHR CID+WL  ++  CPLCRT
Sbjct: 522 DERCLVCLSNFELNDECRRLKQCNHFFHRECIDQWLTSSQNSCPLCRT 569

[Close]

BLAST of IVF0018092 vs. ExPASy TrEMBL
Match: A0A5D3BGV5 (RING-H2 finger protein ATL66-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002280 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 6.1e-79
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MNGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEELPAFRERVV 60
           MNGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEELPAFRERVV
Sbjct: 14  MNGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEELPAFRERVV 73

Query: 61  RDQQEIVQIEAMVFSYREAKRSENDDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHRS 120
           RDQQEIVQIEAMVFSYREAKRSENDDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHRS
Sbjct: 74  RDQQEIVQIEAMVFSYREAKRSENDDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHRS 133

Query: 121 CIDRWLKTERECPLCRTCVCVVVKP 146
           CIDRWLKTERECPLCRTCVCVVVKP
Sbjct: 134 CIDRWLKTERECPLCRTCVCVVVKP 158

[Close]

BLAST of IVF0018092 vs. ExPASy TrEMBL
Match: A0A1S3C6H7 (RING-H2 finger protein ATL66-like OS=Cucumis melo OX=3656 GN=LOC103497236 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 6.1e-79
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MNGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEELPAFRERVV 60
           MNGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEELPAFRERVV
Sbjct: 14  MNGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEELPAFRERVV 73

Query: 61  RDQQEIVQIEAMVFSYREAKRSENDDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHRS 120
           RDQQEIVQIEAMVFSYREAKRSENDDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHRS
Sbjct: 74  RDQQEIVQIEAMVFSYREAKRSENDDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHRS 133

Query: 121 CIDRWLKTERECPLCRTCVCVVVKP 146
           CIDRWLKTERECPLCRTCVCVVVKP
Sbjct: 134 CIDRWLKTERECPLCRTCVCVVVKP 158

[Close]

BLAST of IVF0018092 vs. ExPASy TrEMBL
Match: A0A5A7VPW6 (RING-H2 finger protein ATL66-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00550 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.5e-77
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MNGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEELPAFRERVV 60
           MNGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEELPAFRERVV
Sbjct: 14  MNGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEELPAFRERVV 73

Query: 61  RDQQEIVQIEAMVFSYREAKRSEN-DDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHR 120
           RDQQEIVQIEAMVFSYREAKRSEN DDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHR
Sbjct: 74  RDQQEIVQIEAMVFSYREAKRSENDDDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHR 133

Query: 121 SCIDRWLKTERECPLCRTCVCVVVKP 146
           SCIDRWLKTERECPLCRTCVCVVVKP
Sbjct: 134 SCIDRWLKTERECPLCRTCVCVVVKP 159

[Close]

BLAST of IVF0018092 vs. ExPASy TrEMBL
Match: A0A0A0LXE1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G515480 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 6.3e-52
Identity = 108/146 (73.97%), Postives = 120/146 (82.19%), Query Frame = 0


Query: 2   NGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEE-LPAFRERVV 61
           NG EA+FDD++++AAICFAIIVYF+SFT YFKTGNN+    + D GTVE+ LP FRER  
Sbjct: 15  NGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNE---SEFDTGTVEDRLPVFRER-- 74

Query: 62  RDQQEIVQIEAMVFS-YREAKRSENDDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHR 121
               EIVQIE MVFS YREAK SEN    DDDYECVICLNKFED QKC+WMKKCGHIFH 
Sbjct: 75  ----EIVQIETMVFSYYREAKGSEN----DDDYECVICLNKFEDGQKCQWMKKCGHIFHC 134

Query: 122 SCIDRWLKTERECPLCRTCVCVVVKP 146
           SCIDRWL+TERECPLCR+CVCVVV P
Sbjct: 135 SCIDRWLRTERECPLCRSCVCVVVNP 147

[Close]

BLAST of IVF0018092 vs. ExPASy TrEMBL
Match: A0A6J1KAT3 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111493250 PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 6.0e-26
Identity = 70/130 (53.85%), Postives = 80/130 (61.54%), Query Frame = 0


Query: 16  AICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEELPAFRERVVRDQQEIVQIEAMVFS 75
           AICF II+Y I    +     ++ +S     G    LP  RE       EIV+IEA VFS
Sbjct: 34  AICFLIILYLILLNFF----KSELESGSEPAGA---LPVVRE------PEIVRIEASVFS 93

Query: 76  YREAKRSENDDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHRSCIDRWLKTERECPLC 135
           YREA       D   D EC ICL++FED QKCR M KCGHIFHR CIDRWLK +R CPLC
Sbjct: 94  YREA-------DGGHDDECAICLDEFEDGQKCRKMNKCGHIFHRRCIDRWLKVDRHCPLC 143

Query: 136 RTCVCVVVKP 146
           R+CVCVVV P
Sbjct: 154 RSCVCVVVHP 143

[Close]

BLAST of IVF0018092 vs. NCBI nr
Match: XP_008457571.1 (PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo] >TYJ97408.1 RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa])

HSP 1 Score: 300 bits (769), Expect = 9.74e-103
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MNGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEELPAFRERVV 60
           MNGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEELPAFRERVV
Sbjct: 14  MNGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEELPAFRERVV 73

Query: 61  RDQQEIVQIEAMVFSYREAKRSENDDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHRS 120
           RDQQEIVQIEAMVFSYREAKRSENDDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHRS
Sbjct: 74  RDQQEIVQIEAMVFSYREAKRSENDDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHRS 133

Query: 121 CIDRWLKTERECPLCRTCVCVVVKP 145
           CIDRWLKTERECPLCRTCVCVVVKP
Sbjct: 134 CIDRWLKTERECPLCRTCVCVVVKP 158

[Close]

BLAST of IVF0018092 vs. NCBI nr
Match: KAA0067735.1 (RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa])

HSP 1 Score: 296 bits (757), Expect = 6.82e-101
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MNGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEELPAFRERVV 60
           MNGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEELPAFRERVV
Sbjct: 14  MNGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEELPAFRERVV 73

Query: 61  RDQQEIVQIEAMVFSYREAKRSENDDDDDDD-YECVICLNKFEDAQKCRWMKKCGHIFHR 120
           RDQQEIVQIEAMVFSYREAKRSENDDDDDDD YECVICLNKFEDAQKCRWMKKCGHIFHR
Sbjct: 74  RDQQEIVQIEAMVFSYREAKRSENDDDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHR 133

Query: 121 SCIDRWLKTERECPLCRTCVCVVVKP 145
           SCIDRWLKTERECPLCRTCVCVVVKP
Sbjct: 134 SCIDRWLKTERECPLCRTCVCVVVKP 159

[Close]

BLAST of IVF0018092 vs. NCBI nr
Match: XP_004151032.1 (RING-H2 finger protein ATL66 [Cucumis sativus])

HSP 1 Score: 210 bits (535), Expect = 3.14e-67
Identity = 108/146 (73.97%), Postives = 120/146 (82.19%), Query Frame = 0


Query: 2   NGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEE-LPAFRERVV 61
           NG EA+FDD++++AAICFAIIVYF+SFT YFKTGNN+    + D GTVE+ LP FRER  
Sbjct: 15  NGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNE---SEFDTGTVEDRLPVFRER-- 74

Query: 62  RDQQEIVQIEAMVFSY-REAKRSENDDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHR 121
               EIVQIE MVFSY REAK SENDDD    YECVICLNKFED QKC+WMKKCGHIFH 
Sbjct: 75  ----EIVQIETMVFSYYREAKGSENDDD----YECVICLNKFEDGQKCQWMKKCGHIFHC 134

Query: 122 SCIDRWLKTERECPLCRTCVCVVVKP 145
           SCIDRWL+TERECPLCR+CVCVVV P
Sbjct: 135 SCIDRWLRTERECPLCRSCVCVVVNP 147

[Close]

BLAST of IVF0018092 vs. NCBI nr
Match: KAE8653246.1 (hypothetical protein Csa_019623 [Cucumis sativus])

HSP 1 Score: 160 bits (404), Expect = 2.61e-47
Identity = 84/115 (73.04%), Postives = 90/115 (78.26%), Query Frame = 0


Query: 33  KTGNNDYQSDQSDVGTVEE-LPAFRERVVRDQQEIVQIEAMVFSY-REAKRSENDDDDDD 92
           K GNN+    + D GTVE+ LP FRER      EIVQIE MVFSY REAK SENDDD   
Sbjct: 45  KAGNNE---SEFDTGTVEDRLPVFRER------EIVQIETMVFSYYREAKGSENDDD--- 104

Query: 93  DYECVICLNKFEDAQKCRWMKKCGHIFHRSCIDRWLKTERECPLCRTCVCVVVKP 145
            YECVICLNKFED QKC+WMKKCGHIFH SCIDRWL+TERECPLCR+CVCVVV P
Sbjct: 105 -YECVICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP 146

[Close]

BLAST of IVF0018092 vs. NCBI nr
Match: XP_023524567.1 (RING-H2 finger protein ATL56-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 126 bits (316), Expect = 5.42e-34
Identity = 72/132 (54.55%), Postives = 84/132 (63.64%), Query Frame = 0


Query: 14  VAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEELPAFRERVVRDQQEIVQIEAMV 73
           V AICF II+Y I    +FK+   + +S     G    LP  RE       EIV+IEA V
Sbjct: 32  VIAICFLIILYLILLN-FFKS---ELESGSDPAGA---LPVVRE------PEIVRIEASV 91

Query: 74  FSYREAKRSENDDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHRSCIDRWLKTERECP 133
           FSY+EA    +D       EC ICL++FEDAQKCR M KCGHIFHR CIDRWLK +R CP
Sbjct: 92  FSYKEADGGHDD-------ECAICLDEFEDAQKCRKMNKCGHIFHRRCIDRWLKVDRHCP 143

Query: 134 LCRTCVCVVVKP 145
           LCR+CVCVVV P
Sbjct: 152 LCRSCVCVVVHP 143

[Close]

BLAST of IVF0018092 vs. TAIR 10
Match: AT3G11110.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11
Identity = 38/127 (29.92%), Postives = 61/127 (48.03%), Query Frame = 0


Query: 15  AAICFAIIVYFISFTLYFKTGNNDYQSDQSDVGTVEELPAFRERVVRDQQEIVQIEAMVF 74
           A   F+++++F   TLY         S      + + L   R   + D  EI  +  ++ 
Sbjct: 36  ALALFSVVLFFALLTLYIHRNCLPRDSINLHASSPDRLTRCRSGGL-DPAEIRSLPVVLC 95

Query: 75  SYREAKRSENDDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHRSCIDRWLKTERECPL 134
               A       +++++ EC ICL  FE+ +K + +  C H +H  C+DRWLKTE  CPL
Sbjct: 96  RRERA-------EEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPL 154

Query: 135 CRTCVCV 142
           CR  + V
Sbjct: 156 CRVSIRV 154

[Close]

BLAST of IVF0018092 vs. TAIR 10
Match: AT3G61460.1 (brassinosteroid-responsive RING-H2 )

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11
Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 0


Query: 88  DDDDYECVICLNKFEDAQKCRWMKKCGHIFHRSCIDRWL-KTERECPLCRT 138
           +D    C +CL +FE  Q+ RW++ C HIFHRSC+DRW+   ++ CPLCRT
Sbjct: 88  EDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHDQKTCPLCRT 138

[Close]

BLAST of IVF0018092 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 4.1e-11
Identity = 31/78 (39.74%), Postives = 43/78 (55.13%), Query Frame = 0


Query: 62  DQQEIVQIEAMVFSYREAKRSENDDDDDDDYECVICLNKFEDAQKCRWMKKCGHIFHRSC 121
           D+  I  I    F  R+    E +D   +  EC +CLN+F++ +K R +  C H+FH  C
Sbjct: 103 DESAIRAIPVFKFKKRDVVAGE-EDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDC 162

Query: 122 IDRWLKTERECPLCRTCV 140
           ID WL+    CPLCRT V
Sbjct: 163 IDIWLQGNANCPLCRTSV 179

[Close]

BLAST of IVF0018092 vs. TAIR 10
Match: AT4G09120.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 5.4e-11
Identity = 24/44 (54.55%), Postives = 30/44 (68.18%), Query Frame = 0


Query: 93  ECVICLNKFEDAQKCRWMKKCGHIFHRSCIDRWLKTERECPLCR 137
           EC ICL++FED +  RWM  C H FH +CID WL +   CP+CR
Sbjct: 122 ECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCR 165

[Close]

BLAST of IVF0018092 vs. TAIR 10
Match: AT4G09130.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 7.0e-11
Identity = 35/95 (36.84%), Postives = 50/95 (52.63%), Query Frame = 0


Query: 42  DQSDVGTVEELPAFRERVVRDQQEIVQIEAMVFSYREAKRSENDDDDDDDYECVICLNKF 101
           ++++ G  E L + R R   D+  I    A ++S  +A +  N        EC ICL +F
Sbjct: 74  EENETGGHEVLHS-RVRRGIDKDVIESFPAFLYSEVKAFKIGN-----GGVECAICLCEF 133

Query: 102 EDAQKCRWMKKCGHIFHRSCIDRWLKTERECPLCR 137
           ED +  RWM  C H FH +CID WL +   CP+CR
Sbjct: 134 EDEEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCR 162

The following BLAST results are available for this feature:

BLAST of IVF0018092 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRB7	6.2e-12	43.28	E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5....	[more]
Q9SRM0	1.5e-10	29.92	RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1	[more]
Q9XF92	1.5e-10	50.98	Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH...	[more]
P93823	5.8e-10	39.74	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
Q9P7E1	5.8e-10	52.08	Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces pombe (strai...	[more]

BLAST of IVF0018092 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BGV5	6.1e-79	100.00	RING-H2 finger protein ATL66-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3C6H7	6.1e-79	100.00	RING-H2 finger protein ATL66-like OS=Cucumis melo OX=3656 GN=LOC103497236 PE=4 S...	[more]
A0A5A7VPW6	1.5e-77	99.32	RING-H2 finger protein ATL66-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A0A0LXE1	6.3e-52	73.97	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G515480 P...	[more]
A0A6J1KAT3	6.0e-26	53.85	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111493250 P...	[more]

BLAST of IVF0018092 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457571.1	9.74e-103	100.00	PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo] >TYJ97408.1 RING-H2 ...	[more]
KAA0067735.1	6.82e-101	99.32	RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa]	[more]
XP_004151032.1	3.14e-67	73.97	RING-H2 finger protein ATL66 [Cucumis sativus]	[more]
KAE8653246.1	2.61e-47	73.04	hypothetical protein Csa_019623 [Cucumis sativus]	[more]
XP_023524567.1	5.42e-34	54.55	RING-H2 finger protein ATL56-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0018092 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11110.1	1.1e-11	29.92	RING/U-box superfamily protein	[more]
AT3G61460.1	1.1e-11	50.98	brassinosteroid-responsive RING-H2	[more]
AT1G04360.1	4.1e-11	39.74	RING/U-box superfamily protein	[more]
AT4G09120.1	5.4e-11	54.55	RING/U-box superfamily protein	[more]
AT4G09130.1	7.0e-11	36.84	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 94..135 e-value: 2.0E-7 score: 40.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 93..136 e-value: 4.7E-15 score: 55.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 94..136 score: 13.344952
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 37..140 e-value: 8.7E-21 score: 75.4
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 16..138
None	No IPR available	PANTHER	PTHR14155:SF550	RING-H2 FINGER PROTEIN ATL40	coord: 16..138
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 84..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0018092.1	IVF0018092.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane