IVF0018076 (gene) Melon (IVF77) v1

Overview
NameIVF0018076
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein MNN4-like
Locationchr01: 20096284 .. 20096481 (-)
RNA-Seq ExpressionIVF0018076
SyntenyIVF0018076
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGCGAAGAAGAAAGAAAAGGGGAAGAAGAAGAAGTCCCACTGAAACACAAGAGACAAGGTAAGGAGGAGGACTCAAGATCAAAGAAGGCTAAAACCTCTAAGGCCAGGGACTATAAGGAAACCTTGCCTCCTGCATCATCAAGAAGTCCTAATAAGAAGAATCCCACCCATCCTTTCTTGCCCATTATGTGA

mRNA sequence

ATGGATAGCGAAGAAGAAAGAAAAGGGGAAGAAGAAGAAGTCCCACTGAAACACAAGAGACAAGGTAAGGAGGAGGACTCAAGATCAAAGAAGGCTAAAACCTCTAAGGCCAGGGACTATAAGGAAACCTTGCCTCCTGCATCATCAAGAAGTCCTAATAAGAAGAATCCCACCCATCCTTTCTTGCCCATTATGTGA

Coding sequence (CDS)

ATGGATAGCGAAGAAGAAAGAAAAGGGGAAGAAGAAGAAGTCCCACTGAAACACAAGAGACAAGGTAAGGAGGAGGACTCAAGATCAAAGAAGGCTAAAACCTCTAAGGCCAGGGACTATAAGGAAACCTTGCCTCCTGCATCATCAAGAAGTCCTAATAAGAAGAATCCCACCCATCCTTTCTTGCCCATTATGTGA

Protein sequence

MDSEEERKGEEEEVPLKHKRQGKEEDSRSKKAKTSKARDYKETLPPASSRSPNKKNPTHPFLPIM
Homology
BLAST of IVF0018076 vs. ExPASy TrEMBL
Match: A0A5A7VKE9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G001180 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.8e-06
Identity = 39/63 (61.90%), Postives = 46/63 (73.02%), Query Frame = 0

Query: 2   DSEEERKGEEEEVPLKHKRQGKEEDSRSKKAKTSKARDYKETLPPASSRSPNKKNPTHPF 61
           D +EE + EE+ VPLK KRQG+EE   SKKAKTSKA+D K+TLP AS+  P KK PT  F
Sbjct: 119 DKDEEEESEEDNVPLKCKRQGEEEALGSKKAKTSKAKDSKDTLPHASTTCPKKKKPTTTF 178

Query: 62  LPI 65
            PI
Sbjct: 179 SPI 181

BLAST of IVF0018076 vs. ExPASy TrEMBL
Match: A0A5A7UID3 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00240 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.2e-05
Identity = 37/60 (61.67%), Postives = 47/60 (78.33%), Query Frame = 0

Query: 1   MDSEEERKGEEEEVPLKHKRQGKEEDSRSKKAKTSKARDYKETLPPASSRSPNKKNPTHP 60
           +DS+++ +GE  EV LK KRQ +EE S SKKAKT+KARD KETLPPA S +P+KK P +P
Sbjct: 201 VDSKKKEEGEGAEVLLKQKRQREEEASSSKKAKTTKARDSKETLPPAVSNNPSKKKPNNP 260

BLAST of IVF0018076 vs. ExPASy TrEMBL
Match: A0A5D3DZP5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G00820 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.5e-05
Identity = 37/63 (58.73%), Postives = 48/63 (76.19%), Query Frame = 0

Query: 1   MDSEEERKGEEEEVPLKHKRQGKEEDSRSKKAKTSKARDYKETLPPASSRSPNKKNPTHP 60
           ++  EE + +E+EVPLKHKRQ +EE SRSK+ KTSKA+D K+TLP AS+ SP KK  T+ 
Sbjct: 175 VEVSEEEERDEDEVPLKHKRQVEEEASRSKRVKTSKAKDSKKTLPHASTISPKKKKLTNT 234

Query: 61  FLP 64
           F P
Sbjct: 235 FSP 237

BLAST of IVF0018076 vs. ExPASy TrEMBL
Match: A0A5D3CVU2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00030 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.8e-05
Identity = 37/63 (58.73%), Postives = 46/63 (73.02%), Query Frame = 0

Query: 2   DSEEERKGEEEEVPLKHKRQGKEEDSRSKKAKTSKARDYKETLPPASSRSPNKKNPTHPF 61
           D EEE K EE+++PLK KRQG+EE SRSK+ K+SKA + K+TL  A S SP KK PT+P 
Sbjct: 58  DIEEEGKKEEDDIPLKCKRQGEEEASRSKRPKSSKAEESKKTLSSALSGSPKKKKPTNPL 117

Query: 62  LPI 65
             I
Sbjct: 118 SAI 120

BLAST of IVF0018076 vs. ExPASy TrEMBL
Match: A0A5D3DFQ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold530G00170 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.6e-05
Identity = 35/55 (63.64%), Postives = 41/55 (74.55%), Query Frame = 0

Query: 10  EEEEVPLKHKRQGKEEDSRSKKAKTSKARDYKETLPPASSRSPNKKNPTHPFLPI 65
           EE +VPLK KRQG+++ S SKKAKT++ARD KETLPP  SRSPNKK       PI
Sbjct: 46  EEAKVPLKRKRQGEKKASSSKKAKTTQARDSKETLPPTLSRSPNKKKAKETPQPI 100

BLAST of IVF0018076 vs. NCBI nr
Match: KAA0066896.1 (hypothetical protein E6C27_scaffold550G00090 [Cucumis melo var. makuwa] >TYK27232.1 hypothetical protein E5676_scaffold236G001180 [Cucumis melo var. makuwa])

HSP 1 Score: 61.6 bits (148), Expect = 4.40e-09
Identity = 39/63 (61.90%), Postives = 46/63 (73.02%), Query Frame = 0

Query: 2   DSEEERKGEEEEVPLKHKRQGKEEDSRSKKAKTSKARDYKETLPPASSRSPNKKNPTHPF 61
           D +EE + EE+ VPLK KRQG+EE   SKKAKTSKA+D K+TLP AS+  P KK PT  F
Sbjct: 119 DKDEEEESEEDNVPLKCKRQGEEEALGSKKAKTSKAKDSKDTLPHASTTCPKKKKPTTTF 178

Query: 62  LPI 64
            PI
Sbjct: 179 SPI 181

BLAST of IVF0018076 vs. NCBI nr
Match: KAA0053239.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 59.3 bits (142), Expect = 2.57e-08
Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 0

Query: 1   MDSEEERKGEEEEVPLKHKRQGKEEDSRSKKAKTSKARDYKETLPPASSRSPNKKNPTHP 60
           +DS+++ +GE  EV LK KRQ +EE S SKKAKT+KARD KETLPPA S +P+KK P +P
Sbjct: 201 VDSKKKEEGEGAEVLLKQKRQREEEASSSKKAKTTKARDSKETLPPAVSNNPSKKKPNNP 260

BLAST of IVF0018076 vs. NCBI nr
Match: TYK28984.1 (uncharacterized protein E5676_scaffold120G00820 [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 4.22e-08
Identity = 37/59 (62.71%), Postives = 46/59 (77.97%), Query Frame = 0

Query: 5   EERKGEEEEVPLKHKRQGKEEDSRSKKAKTSKARDYKETLPPASSRSPNKKNPTHPFLP 63
           EE + +E+EVPLKHKRQ +EE SRSK+ KTSKA+D K+TLP AS+ SP KK  T+ F P
Sbjct: 179 EEEERDEDEVPLKHKRQVEEEASRSKRVKTSKAKDSKKTLPHASTISPKKKKLTNTFSP 237

BLAST of IVF0018076 vs. NCBI nr
Match: KAA0058416.1 (hypothetical protein E6C27_scaffold409G001320 [Cucumis melo var. makuwa] >TYK14526.1 hypothetical protein E5676_scaffold552G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 1.26e-07
Identity = 37/63 (58.73%), Postives = 46/63 (73.02%), Query Frame = 0

Query: 2   DSEEERKGEEEEVPLKHKRQGKEEDSRSKKAKTSKARDYKETLPPASSRSPNKKNPTHPF 61
           D EEE K EE+++PLK KRQG+EE SRSK+ K+SKA + K+TL  A S SP KK PT+P 
Sbjct: 58  DIEEEGKKEEDDIPLKCKRQGEEEASRSKRPKSSKAEESKKTLSSALSGSPKKKKPTNPL 117

Query: 62  LPI 64
             I
Sbjct: 118 SAI 120

BLAST of IVF0018076 vs. NCBI nr
Match: KAA0067524.1 (hypothetical protein E6C27_scaffold50G00470 [Cucumis melo var. makuwa] >TYK22422.1 hypothetical protein E5676_scaffold530G00170 [Cucumis melo var. makuwa])

HSP 1 Score: 56.2 bits (134), Expect = 2.29e-07
Identity = 35/55 (63.64%), Postives = 41/55 (74.55%), Query Frame = 0

Query: 10  EEEEVPLKHKRQGKEEDSRSKKAKTSKARDYKETLPPASSRSPNKKNPTHPFLPI 64
           EE +VPLK KRQG+++ S SKKAKT++ARD KETLPP  SRSPNKK       PI
Sbjct: 46  EEAKVPLKRKRQGEKKASSSKKAKTTQARDSKETLPPTLSRSPNKKKAKETPQPI 100

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VKE91.8e-0661.90Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UID31.2e-0561.67Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00... [more]
A0A5D3DZP51.5e-0558.73Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CVU25.8e-0558.73Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DFQ17.6e-0563.64Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0066896.14.40e-0961.90hypothetical protein E6C27_scaffold550G00090 [Cucumis melo var. makuwa] >TYK2723... [more]
KAA0053239.12.57e-0860.66protein MNN4-like [Cucumis melo var. makuwa][more]
TYK28984.14.22e-0862.71uncharacterized protein E5676_scaffold120G00820 [Cucumis melo var. makuwa][more]
KAA0058416.11.26e-0758.73hypothetical protein E6C27_scaffold409G001320 [Cucumis melo var. makuwa] >TYK145... [more]
KAA0067524.12.29e-0763.64hypothetical protein E6C27_scaffold50G00470 [Cucumis melo var. makuwa] >TYK22422... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..65

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0018076.1IVF0018076.1mRNA