IVF0018032 (gene) Melon (IVF77) v1

Overview


Name	IVF0018032
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	nucleolin 1
Location	chr04: 16678871 .. 16680628 (+)
RNA-Seq Expression	IVF0018032
Synteny	IVF0018032

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCAGGCGCTCGGTGGGCTACACGTCGTGTGGAACAACTTGAAGACACCCGTCGGCTACGGCGGCGCCAATAACAGAACGTTTCCGAAATTTTAGTTTTCAAATTCTTTCGAAGCGGCATTTAATCGATGGAAATCGCCGGCGAAGATGGTTCAAAGTTAGTTCTACGAGAGCCAGTGACGATATTCGGAAGAGGCTCAGGATTTGCTTCCAAAGATCGAACAATATCTCGTCGTCACATTTTAATCGAAGCTAAAACCTCAGACAACACTAATGGAGCTCCCATGGAGCCTAAAGTTTCCTTCGAGGTCATCGGTAGGAACCCTATCTGGGTTCGGAGCAGCAAAAATGGCGAAATCAGAACATTTAGAAGATCAGAAAAGGGCAAGATGGCGCCTGGTGAATCGTTCTGCGTGGGTGGGCAAGAACCAATTTGGTTCGAATTAAACAAGATCACTGAATTCGAAGAAGGGAAGCTGGTTTCTTCGCGTTCTTCTGATTCGGATGATATCGATGTTTCTGGCATTGATCCTGTCAAAGGTTTTTTTTCCCGAAAACCTATATTACTTTCCTTATTAATTTTGGAGAAAAGTAATCGAAATCGTCACTTTTCCAGACTGTTACCAAATTACGCCTAGGATTTTCATATCGAAAAGTAAAATTAGGCGATACTACAAAGAAAACAAACGATAAAACTGTTTTAGGAGTTTCAAATTGTGAGTGAATGATACTGATTGTGCTTACTTTGATTTTCTTGCAATGGGACACGAATTTGAATCCTTACAAATGTTTGCTCTCGAAAATCTTTCTAATTTTCCCTAGAGAATTTAGACAAAAATAATTGGAATCATCACTTTTCCAGATTGTTTGCATATCCTGCGTAGGATTTTAATAGAATTAGCAGATACTTTAGAGAACAAACGACAAAGTTGTTTTAGAAGTTCCAAATTTTGAATCGATGATACTGATTGTTCTTACTGTTCCCATGTCAGAATTTGGTTTTCTTGTCATGGGACACGAGTTTGAATGTTATGGCAATCGAGTGATTCGTGATGTGAAAAAATGGGACTGGTTTTTGGATGGGCCGAGTAAAGACAGTCATGATGACGATGAAGATTATGAGAGGAAAAAGAAGAGAGGAGTAAGGGGAAAGAGAAAAAAAGGAGCAAACAGTGACGATGAAGATTGGACAGATGAGAATGAAGATGCTGTTCAAATGATTACAAAAGTACAAAAGTCTCAAAGACCCAAATACTCCACAAGATCAAAAGATCGCAATAAGATTTCTAATGATCAAAGAAAGGCTGCTAAATCTAATAAAGACTATGATGGAGAAGTTGAAGAAGATGAAGATGATGAAACTTTAGGAGGCTTTATTGTCGATGATGAAGTAGATAATGTAGAACAGATGGACGAAGATGAAGAAGAAGAATTTTTAGACGATGAGGATGATGAGGAAGATTGATGAAGCTAATGGTTGTTGGCTGCTCTAACTTAGGCTTGTTCTAGAGAGGTTTGTCTTTGTACATTATTTCATAAGTTTGTGAAATATAAAAGCATCAGTTTTATGTTGTATCTCAAATTGTAGTTTGATAATCCTCTTCAGAGAGGCCTTCTTGTAAGTTGTATTACTCTTTTGCCTCGTGTTGTTAAGAAACTATTCGAGGAGGCCACGACCATGAAAGTATCTTAAATTTATACTCAATAGTTAAGTATTAGCATGCAGATTTTCTTCATCAGACTTCATTCCCAAA

mRNA sequence

ATGTCGTCAGGCGCTCGGTGGGCTACACGTCGTGTGGAACAACTTGAAGACACCCGTCGGCTACGGCGGCGCCAATAACAGAACGTTTCCGAAATTTTAGTTTTCAAATTCTTTCGAAGCGGCATTTAATCGATGGAAATCGCCGGCGAAGATGGTTCAAAGTTAGTTCTACGAGAGCCAGTGACGATATTCGGAAGAGGCTCAGGATTTGCTTCCAAAGATCGAACAATATCTCGTCGTCACATTTTAATCGAAGCTAAAACCTCAGACAACACTAATGGAGCTCCCATGGAGCCTAAAGTTTCCTTCGAGGTCATCGGTAGGAACCCTATCTGGGTTCGGAGCAGCAAAAATGGCGAAATCAGAACATTTAGAAGATCAGAAAAGGGCAAGATGGCGCCTGGTGAATCGTTCTGCGTGGGTGGGCAAGAACCAATTTGGTTCGAATTAAACAAGATCACTGAATTCGAAGAAGGGAAGCTGGTTTCTTCGCGTTCTTCTGATTCGGATGATATCGATGTTTCTGGCATTGATCCTGTCAAAGAATTTGGTTTTCTTGTCATGGGACACGAGTTTGAATGTTATGGCAATCGAGTGATTCGTGATGTGAAAAAATGGGACTGGTTTTTGGATGGGCCGAGTAAAGACAGTCATGATGACGATGAAGATTATGAGAGGAAAAAGAAGAGAGGAGTAAGGGGAAAGAGAAAAAAAGGAGCAAACAGTGACGATGAAGATTGGACAGATGAGAATGAAGATGCTGTTCAAATGATTACAAAAGTACAAAAGTCTCAAAGACCCAAATACTCCACAAGATCAAAAGATCGCAATAAGATTTCTAATGATCAAAGAAAGGCTGCTAAATCTAATAAAGACTATGATGGAGAAGTTGAAGAAGATGAAGATGATGAAACTTTAGGAGGCTTTATTGTCGATGATGAAGTAGATAATGTAGAACAGATGGACGAAGATGAAGAAGAAGAATTTTTAGACGATGAGGATGATGAGGAAGATTGATGAAGCTAATGGTTGTTGGCTGCTCTAACTTAGGCTTGTTCTAGAGAGGTTTGTCTTTGTACATTATTTCATAAGTTTGTGAAATATAAAAGCATCAGTTTTATGTTGTATCTCAAATTGTAGTTTGATAATCCTCTTCAGAGAGGCCTTCTTGTAAGTTGTATTACTCTTTTGCCTCGTGTTGTTAAGAAACTATTCGAGGAGGCCACGACCATGAAAGTATCTTAAATTTATACTCAATAGTTAAGTATTAGCATGCAGATTTTCTTCATCAGACTTCATTCCCAAA

Coding sequence (CDS)

ATGGAAATCGCCGGCGAAGATGGTTCAAAGTTAGTTCTACGAGAGCCAGTGACGATATTCGGAAGAGGCTCAGGATTTGCTTCCAAAGATCGAACAATATCTCGTCGTCACATTTTAATCGAAGCTAAAACCTCAGACAACACTAATGGAGCTCCCATGGAGCCTAAAGTTTCCTTCGAGGTCATCGGTAGGAACCCTATCTGGGTTCGGAGCAGCAAAAATGGCGAAATCAGAACATTTAGAAGATCAGAAAAGGGCAAGATGGCGCCTGGTGAATCGTTCTGCGTGGGTGGGCAAGAACCAATTTGGTTCGAATTAAACAAGATCACTGAATTCGAAGAAGGGAAGCTGGTTTCTTCGCGTTCTTCTGATTCGGATGATATCGATGTTTCTGGCATTGATCCTGTCAAAGAATTTGGTTTTCTTGTCATGGGACACGAGTTTGAATGTTATGGCAATCGAGTGATTCGTGATGTGAAAAAATGGGACTGGTTTTTGGATGGGCCGAGTAAAGACAGTCATGATGACGATGAAGATTATGAGAGGAAAAAGAAGAGAGGAGTAAGGGGAAAGAGAAAAAAAGGAGCAAACAGTGACGATGAAGATTGGACAGATGAGAATGAAGATGCTGTTCAAATGATTACAAAAGTACAAAAGTCTCAAAGACCCAAATACTCCACAAGATCAAAAGATCGCAATAAGATTTCTAATGATCAAAGAAAGGCTGCTAAATCTAATAAAGACTATGATGGAGAAGTTGAAGAAGATGAAGATGATGAAACTTTAGGAGGCTTTATTGTCGATGATGAAGTAGATAATGTAGAACAGATGGACGAAGATGAAGAAGAAGAATTTTTAGACGATGAGGATGATGAGGAAGATTGA

Protein sequence

MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFEVIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSSRSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDYERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQRKAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDEDDEED

Homology

[Close]

BLAST of IVF0018032 vs. ExPASy TrEMBL
Match: A0A5D3BXV5 (Nucleolin 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00290 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.1e-159
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60
           MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120
           VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY 180

Query: 181 ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR
Sbjct: 181 ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDEDDEED 295
           KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDEDDEED
Sbjct: 241 KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDEDDEED 294

[Close]

BLAST of IVF0018032 vs. ExPASy TrEMBL
Match: A0A1S3BHB4 (nucleolin 1 OS=Cucumis melo OX=3656 GN=LOC103490042 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.1e-159
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60
           MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120
           VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY 180

Query: 181 ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR
Sbjct: 181 ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDEDDEED 295
           KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDEDDEED
Sbjct: 241 KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDEDDEED 294

[Close]

BLAST of IVF0018032 vs. ExPASy TrEMBL
Match: A0A5A7T1L8 (Nucleolin 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold510G00450 PE=4 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 1.4e-159
Identity = 293/294 (99.66%), Postives = 294/294 (100.00%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60
           MEIAGEDGSKL+LREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE
Sbjct: 1   MEIAGEDGSKLILREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120
           VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY 180

Query: 181 ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR
Sbjct: 181 ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDEDDEED 295
           KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDEDDEED
Sbjct: 241 KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDEDDEED 294

[Close]

BLAST of IVF0018032 vs. ExPASy TrEMBL
Match: A0A0A0LFR7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848190 PE=4 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 1.7e-149
Identity = 278/295 (94.24%), Postives = 287/295 (97.29%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60
           MEI GEDGSKLVLREPVT+FGRGSGFASKDRTISRRHILIEAKTS+NTNGAPMEPKVSFE
Sbjct: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120
           VIGRNPIWVRSSKNGEIRTF+RSEKG+MAPGESFCVGGQEPIWFELNKI EFEEGK V S
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCVGGQEPIWFELNKIAEFEEGKQVFS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDS DD+EDY
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDDDNEDY 180

Query: 181 ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           ERKKKRGV GKRKKG NSDDEDWTDENEDAV+MITKVQKSQRPKYSTRSKDRNKISNDQR
Sbjct: 181 ERKKKRGVIGKRKKGTNSDDEDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDED-EEEEFLDDEDDEED 295
           KAAKSNK+Y+GEVEEDEDDETLGGFIVDDEVDNVEQMDED EEEEFLDDE+DEED
Sbjct: 241 KAAKSNKNYNGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEEFLDDEEDEED 295

[Close]

BLAST of IVF0018032 vs. ExPASy TrEMBL
Match: A0A6J1DEJ6 (protein bfr2 OS=Momordica charantia OX=3673 GN=LOC111020320 PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 4.9e-128
Identity = 245/305 (80.33%), Postives = 266/305 (87.21%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60
           MEIAGEDGSKLV+ EPVTIFGRGSGFASKDRT+SRRH+LIEAKTS+N +GAP+EP +SFE
Sbjct: 1   MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLV-- 120
           VIGRNPIWVRS KNGEIRTFRRSEKG++APGESFCVGGQEP WF+LNKI E EEGK +  
Sbjct: 61  VIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQEPTWFKLNKIAEIEEGKRIVP 120

Query: 121 ---------SSRSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGP 180
                     +RSSDS+DIDVSGIDPVKEFGFLVMGHEFECYGNRVIRD KKWDWFLD P
Sbjct: 121 KTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEP 180

Query: 181 SKDSHDDDEDYERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRS 240
            K S DDDEDY R+K+RGVRGKRKKGANSDDEDWTDENEDAV+MI K +K QRPKYSTRS
Sbjct: 181 RKGS-DDDEDYGRRKRRGVRGKRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRS 240

Query: 241 KDRNKISNDQRKAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDE 295
           KD NK + DQ KAA SNKDYD   EEDEDDETLGGFIVDDEVDN EQMDEDEEEEF DD+
Sbjct: 241 KDHNKTNKDQNKAANSNKDYD---EEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD 300

[Close]

BLAST of IVF0018032 vs. NCBI nr
Match: XP_008447630.1 (PREDICTED: nucleolin 1 [Cucumis melo] >TYK03672.1 nucleolin 1 [Cucumis melo var. makuwa])

HSP 1 Score: 570 bits (1468), Expect = 1.50e-204
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60
           MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120
           VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY 180

Query: 181 ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR
Sbjct: 181 ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDEDDEED 294
           KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDEDDEED
Sbjct: 241 KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDEDDEED 294

[Close]

BLAST of IVF0018032 vs. NCBI nr
Match: KAA0036698.1 (nucleolin 1 [Cucumis melo var. makuwa])

HSP 1 Score: 569 bits (1467), Expect = 2.13e-204
Identity = 293/294 (99.66%), Postives = 294/294 (100.00%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60
           MEIAGEDGSKL+LREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE
Sbjct: 1   MEIAGEDGSKLILREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120
           VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY 180

Query: 181 ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR
Sbjct: 181 ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDEDDEED 294
           KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDEDDEED
Sbjct: 241 KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDEDDEED 294

[Close]

BLAST of IVF0018032 vs. NCBI nr
Match: XP_004146848.1 (nucleolin 1 [Cucumis sativus] >KGN59809.1 hypothetical protein Csa_000774 [Cucumis sativus])

HSP 1 Score: 536 bits (1380), Expect = 4.03e-191
Identity = 278/295 (94.24%), Postives = 287/295 (97.29%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60
           MEI GEDGSKLVLREPVT+FGRGSGFASKDRTISRRHILIEAKTS+NTNGAPMEPKVSFE
Sbjct: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120
           VIGRNPIWVRSSKNGEIRTF+RSEKG+MAPGESFCVGGQEPIWFELNKI EFEEGK V S
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCVGGQEPIWFELNKIAEFEEGKQVFS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDS DD+EDY
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDDDNEDY 180

Query: 181 ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           ERKKKRGV GKRKKG NSDDEDWTDENEDAV+MITKVQKSQRPKYSTRSKDRNKISNDQR
Sbjct: 181 ERKKKRGVIGKRKKGTNSDDEDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEE-FLDDEDDEED 294
           KAAKSNK+Y+GEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEE FLDDE+DEED
Sbjct: 241 KAAKSNKNYNGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEEFLDDEEDEED 295

[Close]

BLAST of IVF0018032 vs. NCBI nr
Match: XP_038898830.1 (protein PIF [Benincasa hispida])

HSP 1 Score: 483 bits (1244), Expect = 2.19e-170
Identity = 254/293 (86.69%), Postives = 266/293 (90.78%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60
           MEIAGEDGSKLVLREPVTIFGRGSGFASKDRT+SRRHILIEAKTS+N+NGAP+EP VSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTVSRRHILIEAKTSENSNGAPIEPTVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120
           VIGRNPIWVRSSKNGEIRTFRRSEKG+MA GESFCVG QEPIWFELNKI EFEE K   S
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGEMALGESFCVGSQEPIWFELNKIAEFEERKQFFS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDEDY 180
           RSSDS DIDVSGIDPVKEFGFL MGHEFECYGNRVIRD KKWDWFLD P KDS DDDEDY
Sbjct: 121 RSSDSVDIDVSGIDPVKEFGFLAMGHEFECYGNRVIRDPKKWDWFLDEPRKDS-DDDEDY 180

Query: 181 ERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRSKDRNKISNDQR 240
            RKKKRGV+GKRKKGANSDDEDWTDENEDAV+MITK +K +RPKYSTRSKDR+K  NDQ+
Sbjct: 181 GRKKKRGVKGKRKKGANSDDEDWTDENEDAVEMITKTKKFRRPKYSTRSKDRHKTPNDQK 240

Query: 241 KAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDE-----EEEFLDD 288
           KAA+SNKDYD EVEEDEDDETLGGFIVDDE DNVEQMDEDE     EEEF DD
Sbjct: 241 KAARSNKDYDEEVEEDEDDETLGGFIVDDEEDNVEQMDEDEDEDEEEEEFSDD 292

[Close]

BLAST of IVF0018032 vs. NCBI nr
Match: XP_022152655.1 (protein bfr2 [Momordica charantia])

HSP 1 Score: 464 bits (1194), Expect = 1.08e-162
Identity = 245/305 (80.33%), Postives = 266/305 (87.21%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60
           MEIAGEDGSKLV+ EPVTIFGRGSGFASKDRT+SRRH+LIEAKTS+N +GAP+EP +SFE
Sbjct: 1   MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVS- 120
           VIGRNPIWVRS KNGEIRTFRRSEKG++APGESFCVGGQEP WF+LNKI E EEGK +  
Sbjct: 61  VIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQEPTWFKLNKIAEIEEGKRIVP 120

Query: 121 ----------SRSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGP 180
                     +RSSDS+DIDVSGIDPVKEFGFLVMGHEFECYGNRVIRD KKWDWFLD P
Sbjct: 121 KTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEP 180

Query: 181 SKDSHDDDEDYERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRS 240
            K S DDDEDY R+K+RGVRGKRKKGANSDDEDWTDENEDAV+MI K +K QRPKYSTRS
Sbjct: 181 RKGS-DDDEDYGRRKRRGVRGKRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRS 240

Query: 241 KDRNKISNDQRKAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDE 294
           KD NK + DQ KAA SNKDYD   EEDEDDETLGGFIVDDEVDN EQMDEDEEEEF DD+
Sbjct: 241 KDHNKTNKDQNKAANSNKDYD---EEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD 300

[Close]

BLAST of IVF0018032 vs. TAIR 10
Match: AT3G13780.1 (SMAD/FHA domain-containing protein )

HSP 1 Score: 218.4 bits (555), Expect = 7.7e-57
Identity = 127/300 (42.33%), Postives = 196/300 (65.33%), Query Frame = 0


Query: 1   MEIAGEDGSKLVLREPV-TIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSF 60
           MEI GEDG+KL L+  V  +FGRG+GF ++D T+SRRH+ +  K +    G      VSF
Sbjct: 14  MEIEGEDGTKLFLKTGVKDVFGRGAGFNTEDLTVSRRHVSLVFKPA--AAGTEPSDMVSF 73

Query: 61  EVIGRNPIWVRSSKNG-EIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLV 120
           EV+GRNP+W+R+ + G +I+T R+ E G++A G+ FCV G  PIWF L +  E     ++
Sbjct: 74  EVLGRNPVWIRAVEKGKKIQTLRKPETGEIATGDQFCVSGNHPIWFTLKRRDE-----VM 133

Query: 121 SSRSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSHDDDE 180
             R+ D  +I+++ IDPVKEFGFLV+G EF+ Y    +RD+K+W+WFL+  +  + D DE
Sbjct: 134 EERALDHGEIELN-IDPVKEFGFLVIGKEFDQYPKSRVRDIKQWEWFLEDSTNGNSDGDE 193

Query: 181 DYERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRS----KDRNK 240
           D ++K ++G+  KR++   ++D+DW+ E+++  +++ K ++   P YSTRS    KD N 
Sbjct: 194 DGDKKGRKGLGKKRRRKKGNEDDDWSVESDEDKELMVKSKRVVTPTYSTRSKKTKKDSNA 253

Query: 241 ISNDQRKAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDEDDEED 295
            S+    A    +      EED+DDETLGGFIV DE   +E+ +E+E+E  +DDE+DE++
Sbjct: 254 SSSSSNGAQTKQRGRADVEEEDDDDETLGGFIVSDEEAKLEEEEEEEDESDVDDEEDEDE 305

The following BLAST results are available for this feature:

BLAST of IVF0018032 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0018032 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BXV5	1.1e-159	100.00	Nucleolin 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00290 PE...	[more]
A0A1S3BHB4	1.1e-159	100.00	nucleolin 1 OS=Cucumis melo OX=3656 GN=LOC103490042 PE=4 SV=1	[more]
A0A5A7T1L8	1.4e-159	99.66	Nucleolin 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold510G00450 PE...	[more]
A0A0A0LFR7	1.7e-149	94.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848190 PE=4 SV=1	[more]
A0A6J1DEJ6	4.9e-128	80.33	protein bfr2 OS=Momordica charantia OX=3673 GN=LOC111020320 PE=4 SV=1	[more]

BLAST of IVF0018032 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447630.1	1.50e-204	100.00	PREDICTED: nucleolin 1 [Cucumis melo] >TYK03672.1 nucleolin 1 [Cucumis melo var....	[more]
KAA0036698.1	2.13e-204	99.66	nucleolin 1 [Cucumis melo var. makuwa]	[more]
XP_004146848.1	4.03e-191	94.24	nucleolin 1 [Cucumis sativus] >KGN59809.1 hypothetical protein Csa_000774 [Cucum...	[more]
XP_038898830.1	2.19e-170	86.69	protein PIF [Benincasa hispida]	[more]
XP_022152655.1	1.08e-162	80.33	protein bfr2 [Momordica charantia]	[more]

BLAST of IVF0018032 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13780.1	7.7e-57	42.33	SMAD/FHA domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.200.20		coord: 3..110 e-value: 6.1E-13 score: 50.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..294
None	No IPR available	PANTHER	PTHR37733	SMAD/FHA DOMAIN-CONTAINING PROTEIN	coord: 1..293
IPR008984	SMAD/FHA domain superfamily	SUPERFAMILY	49879	SMAD/FHA domain	coord: 15..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0018032.1	IVF0018032.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding