IVF0017941 (gene) Melon (IVF77) v1

Overview


Name	IVF0017941
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr04: 2225985 .. 2227706 (-)
RNA-Seq Expression	IVF0017941
Synteny	IVF0017941

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGACTGGAAAAAGGGTTTTGACATTGGCCAGAAACGTTTCCTTCAGTATTCCACTTCAGTCACAGCAACCTCATTATCCACTTATTTTCCGGGGATTCTTCTCCACTGATCCTTCGATTTCCATTACAAATCCTCTGCTTCTCAAATTGCTTCAGGAGCCAACTTCGTCTGTCAAATCCGTGCTCGATTCCCAGGAGAATGGTTTTCTCTGTAGCTCCCGTCTTTCCTTGAATGACCTTGTTACGTCTCTTATATCTTCTTCAAAGCCCAAGAAGGCTCAGCTGGTAACTCTCCCTATTCTCTCTTTTTTTCTCCATTGTTGTCTGTTTTGTTGGTTGTTGAATGATTATAGGGTAAGAAAAGCTATGGTTTCTGTGTGTTGGTGGTATCTGAATTGTAAAGAGAAATAAACCAATGACTTAGAAAGAGCACCCTAGCGGAAGCAAAGCTATTGGAGCTTGATATTGAAGGTCCTTTGGTTTCTTTTAAAATATCACTCGGAATGAAAAGCTTTAACGAGAAAAGACCACTAAAGGTGGATTTTGGATCCAAAGATGGAATGATAAGCAATTAAAAGCACATAAATATTTGGATAGAGAACCCCTAGAAGAAAGCTCTAGACTTAGAGATTCAAAGGGCTCAAGGTAAGGAAAGATTTGAAGGCGTTATGTAACTTGAACTTGCATAATTCCTCAAGGTCGGTGAGGATTGATAGTGATTTTTAAATGGTTAAAAGTACTTTCTTCATCTTCTAAATCATTCCTAAGACTGTAAAATCATACATTAAATTGAATTTAAATGACTGAAGGCATGTGTTTGAGTGATTTTAAACATATAACAATGTTAGACAGACTGATTTTGCTCCCAAACATTACCCTTGCTATCAATTGAATAATGTTCTGTAGGAACTGGTTTCATGTTTTCAACTGTCTTTTCTTCCAATGGATTCGGTGATAGGCAAGTTTATCTTTGAGCTATCATGGTATCTATGATTAACCTTTTTTCTGGGGCTTTATCAGGTTTTGGAATGGAAATTGGAGAAAATGAGCAAAAGAAATGAGAGTGATCCTGATTTGTACATCAACCTGATACGTCTATGCGGAAAGCTTAGAGATTCCTTTCTTGCAATGCGTGTCTTCACTGTTATGGAATTTCAAGGAGTTAAACCCACGGTGACTGCTTTCAATTCACTTATAGAGGCTTGTATATCTTCCCATAATATGATAACTGCCTTTGGCATATTTGAAGTAATGAAAAACTCCAAAAATTTTAAACCCAATACTGACACTTTCTATTATTTCATTTCTGAATTCTCCAAATTGCGCGATGTCAACTCTATGCAAGCATGGTATTCAGCCAAAAAAGCGTTTGAATTCTCTCCTGACCTTCGAACCTATGAAGCTCTTATACATGGCAGTGTGAAATCAAAGTGCTTTGATTTTGCTGTTAAATGTTTTGAGGAAATGATGTTATCTGACATTGTACCCAATGCAATCATATTGGAGAATATGCTTGAAGGGCTCTGTAAGAGGAAAAACTTTGATGAAGTGAAGAAGTTCCTAAATGTTGTGCTTGACAACGGATGGGAGATCAATTGGAATGTGGTTGAGAAATTCATTCCAGTATGGTTTGAATCTGGGGAGTTGGAAGGGATGAAGGAGATCCTTACTAAGATAAATAAGTCTAATTCGGCTACCGATGACATACAGTCATAA

mRNA sequence

ATGGCGTCGACTGGAAAAAGGGTTTTGACATTGGCCAGAAACGTTTCCTTCAGTATTCCACTTCAGTCACAGCAACCTCATTATCCACTTATTTTCCGGGGATTCTTCTCCACTGATCCTTCGATTTCCATTACAAATCCTCTGCTTCTCAAATTGCTTCAGGAGCCAACTTCGTCTGTCAAATCCGTGCTCGATTCCCAGGAGAATGGTTTTCTCTGTAGCTCCCGTCTTTCCTTGAATGACCTTGTTACGTCTCTTATATCTTCTTCAAAGCCCAAGAAGGCTCAGCTGGTTTTGGAATGGAAATTGGAGAAAATGAGCAAAAGAAATGAGAGTGATCCTGATTTGTACATCAACCTGATACGTCTATGCGGAAAGCTTAGAGATTCCTTTCTTGCAATGCGTGTCTTCACTGTTATGGAATTTCAAGGAGTTAAACCCACGGTGACTGCTTTCAATTCACTTATAGAGGCTTGTATATCTTCCCATAATATGATAACTGCCTTTGGCATATTTGAAGTAATGAAAAACTCCAAAAATTTTAAACCCAATACTGACACTTTCTATTATTTCATTTCTGAATTCTCCAAATTGCGCGATGTCAACTCTATGCAAGCATGGTATTCAGCCAAAAAAGCGTTTGAATTCTCTCCTGACCTTCGAACCTATGAAGCTCTTATACATGGCAGTGTGAAATCAAAGTGCTTTGATTTTGCTGTTAAATGTTTTGAGGAAATGATGTTATCTGACATTGTACCCAATGCAATCATATTGGAGAATATGCTTGAAGGGCTCTGTAAGAGGAAAAACTTTGATGAAGTGAAGAAGTTCCTAAATGTTGTGCTTGACAACGGATGGGAGATCAATTGGAATGTGGTTGAGAAATTCATTCCAGTATGGTTTGAATCTGGGGAGTTGGAAGGGATGAAGGAGATCCTTACTAAGATAAATAAGTCTAATTCGGCTACCGATGACATACAGTCATAA

Coding sequence (CDS)

ATGGCGTCGACTGGAAAAAGGGTTTTGACATTGGCCAGAAACGTTTCCTTCAGTATTCCACTTCAGTCACAGCAACCTCATTATCCACTTATTTTCCGGGGATTCTTCTCCACTGATCCTTCGATTTCCATTACAAATCCTCTGCTTCTCAAATTGCTTCAGGAGCCAACTTCGTCTGTCAAATCCGTGCTCGATTCCCAGGAGAATGGTTTTCTCTGTAGCTCCCGTCTTTCCTTGAATGACCTTGTTACGTCTCTTATATCTTCTTCAAAGCCCAAGAAGGCTCAGCTGGTTTTGGAATGGAAATTGGAGAAAATGAGCAAAAGAAATGAGAGTGATCCTGATTTGTACATCAACCTGATACGTCTATGCGGAAAGCTTAGAGATTCCTTTCTTGCAATGCGTGTCTTCACTGTTATGGAATTTCAAGGAGTTAAACCCACGGTGACTGCTTTCAATTCACTTATAGAGGCTTGTATATCTTCCCATAATATGATAACTGCCTTTGGCATATTTGAAGTAATGAAAAACTCCAAAAATTTTAAACCCAATACTGACACTTTCTATTATTTCATTTCTGAATTCTCCAAATTGCGCGATGTCAACTCTATGCAAGCATGGTATTCAGCCAAAAAAGCGTTTGAATTCTCTCCTGACCTTCGAACCTATGAAGCTCTTATACATGGCAGTGTGAAATCAAAGTGCTTTGATTTTGCTGTTAAATGTTTTGAGGAAATGATGTTATCTGACATTGTACCCAATGCAATCATATTGGAGAATATGCTTGAAGGGCTCTGTAAGAGGAAAAACTTTGATGAAGTGAAGAAGTTCCTAAATGTTGTGCTTGACAACGGATGGGAGATCAATTGGAATGTGGTTGAGAAATTCATTCCAGTATGGTTTGAATCTGGGGAGTTGGAAGGGATGAAGGAGATCCTTACTAAGATAAATAAGTCTAATTCGGCTACCGATGACATACAGTCATAA

Protein sequence

MASTGKRVLTLARNVSFSIPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINLIRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKNFKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVWFESGELEGMKEILTKINKSNSATDDIQS

Homology

[Close]

BLAST of IVF0017941 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 3.3e-13
Identity = 57/215 (26.51%), Postives = 93/215 (43.26%), Query Frame = 0


Query: 103 LEKMSK-RNESDPDLYINLIRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACIS 162
           L+KM K + E+D  +Y  +I      ++   A+ +FT M+ +G++P V  +NSLI    +
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302

Query: 163 SHNMITAFGIFEVMKNSKNFKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLR 222
                 A  +   M   K   PN  TF   I  F K   +   +  Y         PD+ 
Sbjct: 303 YGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362

Query: 223 TYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVV 282
           TY +LI+G       D A   FE M+  D  PN +    +++G CK K  +E  +    +
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 422

Query: 283 LDNGWEINWNVVEKFIPVWFESGELEGMKEILTKI 317
              G   N       I   F++G+ +  ++I  K+
Sbjct: 423 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456

[Close]

BLAST of IVF0017941 vs. ExPASy Swiss-Prot
Match: Q9M302 (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX=3702 GN=At3g48810 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.7e-12
Identity = 54/247 (21.86%), Postives = 104/247 (42.11%), Query Frame = 0


Query: 80  NDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINLIRLCGKLRDSFLAMRVFTV 139
           N L+  L      K A  ++   +EK    N       IN++   G++    LA    T 
Sbjct: 250 NALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE---LAFSFLTQ 309

Query: 140 MEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKNFKPNTDTFYYFISEFSKLR 199
           M  +G  P +   +SL++ C        A  ++  M      +PN   +   +  F    
Sbjct: 310 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 369

Query: 200 DVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNAIILE 259
           ++    + +S  +    SP++RTY +LI+G  K    D AV  + +M+ S   PN ++  
Sbjct: 370 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 429

Query: 260 NMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVWFESGELEGMKEILTKINKS 319
           NM+E LC+   F E +  + ++       +      FI    ++G L+  +++  ++ + 
Sbjct: 430 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 489

Query: 320 NSATDDI 327
           +    +I
Sbjct: 490 HRCPPNI 493

[Close]

BLAST of IVF0017941 vs. ExPASy Swiss-Prot
Match: Q9CAN0 (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63130 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.1e-11
Identity = 64/251 (25.50%), Postives = 106/251 (42.23%), Query Frame = 0


Query: 81  DLVT-SLISSSKPKKAQLVLEWKLEKMSKRNESDPD--LYINLIRLCGKLRDSFLAMRVF 140
           DLVT  ++ +   K+  + L   L K  ++ + +P   +Y  +I      ++   A+ +F
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279

Query: 141 TVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKNFKPNTDTFYYFISEFSK 200
           T M+ +G++P V  +NSLI    +      A  +   M   K   PN  TF   I  F K
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVK 339

Query: 201 LRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNAII 260
              +   +  Y         PD+ TY +LI+G       D A   FE M+  D  PN + 
Sbjct: 340 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 399

Query: 261 LENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVWFESGELEGMKEILTKIN 320
              +++G CK K  DE  +    +   G   N       I  +F++ E +   +I+ K  
Sbjct: 400 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN-AQIVFKQM 459

Query: 321 KSNSATDDIQS 329
            S+    DI +
Sbjct: 460 VSDGVLPDIMT 468

[Close]

BLAST of IVF0017941 vs. ExPASy Swiss-Prot
Match: Q9SH26 (Pentatricopeptide repeat-containing protein At1g63400 OS=Arabidopsis thaliana OX=3702 GN=At1g63400 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.8e-11
Identity = 56/215 (26.05%), Postives = 90/215 (41.86%), Query Frame = 0


Query: 103 LEKM-SKRNESDPDLYINLIRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACIS 162
           L KM + + E++  +Y  +I    K R    A+ +FT ME +GV+P V  ++SLI    +
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 307

Query: 163 SHNMITAFGIFEVMKNSKNFKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLR 222
                 A  +   M   K   PN  TF   I  F K   +   +  Y         PD+ 
Sbjct: 308 YERWSDASRLLSDMIERK-INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 367

Query: 223 TYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVV 282
           TY +LI+G       D A   FE M+  D  PN +    ++ G CK K  DE  +    +
Sbjct: 368 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 427

Query: 283 LDNGWEINWNVVEKFIPVWFESGELEGMKEILTKI 317
              G   N       I  +F++ + +  + +  ++
Sbjct: 428 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461

[Close]

BLAST of IVF0017941 vs. ExPASy Swiss-Prot
Match: Q9SS81 (Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX=3702 GN=At3g09060 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.3e-11
Identity = 62/236 (26.27%), Postives = 101/236 (42.80%), Query Frame = 0


Query: 33  RGFFSTDPSISITNPLLLKLLQ-EPTSSVKSVLDSQENGFLCSSRLSLNDLVTSLISSSK 92
           R  F  +P+I   N LL   ++ +    V+S+    E   +  +  + N L+       +
Sbjct: 105 REIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKE 164

Query: 93  PKKAQLVLEWKLEKMSKRNESDPDLYINLIRLCGKLRDSFLAMRVFTVMEFQGVKPTVTA 152
            +KA+  L+W  ++  K +       IN +   GKL D   A+ +F  M  +GV P VT 
Sbjct: 165 FEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDD---ALELFDEMSERGVAPDVTC 224

Query: 153 FNSLIEACISSHNMITAFGIFEVMKNSKNFKPNTDTFYYFISEFSKLRDVNSMQAWYSAK 212
           +N LI+  +   +  TA  +++ +    +  PN  T    IS  SK   V+     +   
Sbjct: 225 YNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERM 284

Query: 213 KAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNAIILENMLEGLCK 268
           K  E   DL TY +LIHG   +   D A   F E+       + +    ML G C+
Sbjct: 285 KQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR 337

[Close]

BLAST of IVF0017941 vs. ExPASy TrEMBL
Match: A0A5D3E5Z9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006320 PE=3 SV=1)

HSP 1 Score: 647.9 bits (1670), Expect = 2.3e-182
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0


Query: 1   MASTGKRVLTLARNVSFSIPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60
           MASTGKRVLTLARNVSFSIPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV
Sbjct: 1   MASTGKRVLTLARNVSFSIPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60

Query: 61  KSVLDSQENGFLCSSRLSLNDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINL 120
           KSVLDSQENGFLCSSRLSLNDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINL
Sbjct: 61  KSVLDSQENGFLCSSRLSLNDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINL 120

Query: 121 IRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKN 180
           IRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKN
Sbjct: 121 IRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKN 180

Query: 181 FKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240
           FKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV
Sbjct: 181 FKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240

Query: 241 KCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVW 300
           KCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVW
Sbjct: 241 KCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVW 300

Query: 301 FESGELEGMKEILTKINKSNSATDDIQS 329
           FESGELEGMKEILTKINKSNSATDDIQS
Sbjct: 301 FESGELEGMKEILTKINKSNSATDDIQS 328

[Close]

BLAST of IVF0017941 vs. ExPASy TrEMBL
Match: A0A1S3CS56 (pentatricopeptide repeat-containing protein At3g09060-like OS=Cucumis melo OX=3656 GN=LOC103503719 PE=3 SV=1)

HSP 1 Score: 647.9 bits (1670), Expect = 2.3e-182
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0


Query: 1   MASTGKRVLTLARNVSFSIPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60
           MASTGKRVLTLARNVSFSIPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV
Sbjct: 1   MASTGKRVLTLARNVSFSIPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60

Query: 61  KSVLDSQENGFLCSSRLSLNDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINL 120
           KSVLDSQENGFLCSSRLSLNDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINL
Sbjct: 61  KSVLDSQENGFLCSSRLSLNDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINL 120

Query: 121 IRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKN 180
           IRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKN
Sbjct: 121 IRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKN 180

Query: 181 FKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240
           FKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV
Sbjct: 181 FKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240

Query: 241 KCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVW 300
           KCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVW
Sbjct: 241 KCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVW 300

Query: 301 FESGELEGMKEILTKINKSNSATDDIQS 329
           FESGELEGMKEILTKINKSNSATDDIQS
Sbjct: 301 FESGELEGMKEILTKINKSNSATDDIQS 328

[Close]

BLAST of IVF0017941 vs. ExPASy TrEMBL
Match: A0A0A0LJI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889090 PE=4 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 3.8e-161
Identity = 293/320 (91.56%), Postives = 301/320 (94.06%), Query Frame = 0


Query: 1   MASTGKRVLTLARNVSFSIPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60
           MASTGKRVL LARNVS S+PLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV
Sbjct: 1   MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60

Query: 61  KSVLDSQENGFLCSSRLSLNDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINL 120
           KSVLDSQENGFLCSSRLSLN LVTSLISSS  KKAQLVLEWKLE MSK+NE D D YINL
Sbjct: 61  KSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLEWKLENMSKKNERDLDFYINL 120

Query: 121 IRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKN 180
           I LCGKLR+S LAMRVF VMEFQGVKPTVTAFNSLIEACISS+NMITAF IFEVMKNSKN
Sbjct: 121 ICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKN 180

Query: 181 FKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240
           FKPNTDTFYYFIS F+KL DVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKS CFDF V
Sbjct: 181 FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGV 240

Query: 241 KCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVW 300
           KCFEEM+LSDIVPN IILENMLEGLCKRKNFDEVKKFLNVVLDNGWEI+WNVVEKFIPVW
Sbjct: 241 KCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW 300

Query: 301 FESGELEGMKEILTKINKSN 321
           FESGELEGMKEILTK+NK N
Sbjct: 301 FESGELEGMKEILTKLNKWN 320

[Close]

BLAST of IVF0017941 vs. ExPASy TrEMBL
Match: A0A6J1II25 (pentatricopeptide repeat-containing protein At2g37230-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476476 PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 5.7e-133
Identity = 243/319 (76.18%), Postives = 274/319 (85.89%), Query Frame = 0


Query: 1   MASTGKRVLTLARNVSFSIPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60
           MA    RVL LA+  S  IPL+ Q+ HY  I R F STDPS SI NPL+L+L+QEP+SSV
Sbjct: 1   MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSV 60

Query: 61  KSVLDSQENGFLCSSRLSLNDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINL 120
           KSVLDS EN FL SSRLS   LVTSLISSS PKKAQL LEW+LEKM+K NE DPD YI+L
Sbjct: 61  KSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALEWRLEKMNKENERDPDFYIDL 120

Query: 121 IRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKN 180
           IRLCG+L++  LAMRVFT MEFQGVKPTVTAFNSLIE CISSHNMITAF +FE+MKNS++
Sbjct: 121 IRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSES 180

Query: 181 FKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240
           FKPN DTF+YFIS F+KLRDVNSM+AWYSAK+AFEFS DLRTYEALIHGSV SKCFDFAV
Sbjct: 181 FKPNADTFFYFISAFAKLRDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAV 240

Query: 241 KCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVW 300
           +CF+EMMLS IVPNAIIL+NMLEG CKRK+ DE+KKFL VVLD GWEI WNVVEKFIP+W
Sbjct: 241 RCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW 300

Query: 301 FESGELEGMKEILTKINKS 320
           FESGE EGM+EILTK+N++
Sbjct: 301 FESGEAEGMEEILTKLNEA 319

[Close]

BLAST of IVF0017941 vs. ExPASy TrEMBL
Match: A0A6J1FC94 (pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442788 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 4.0e-126
Identity = 232/313 (74.12%), Postives = 262/313 (83.71%), Query Frame = 0


Query: 1   MASTGKRVLTLARNVSFSIPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60
           MA    RVL LA+  S  +PL+ Q+PHY  I R F STDPS SI NPL+L+L+QEP+SSV
Sbjct: 1   MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSV 60

Query: 61  KSVLDSQENGFLCSSRLSLNDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINL 120
           KSVLDS EN FL SS LS   LVTSLISSS PKKAQL LEW+LEKMSK NE DPD YI+L
Sbjct: 61  KSVLDSPENAFLGSSWLSWKALVTSLISSSSPKKAQLALEWRLEKMSKENERDPDFYIDL 120

Query: 121 IRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKN 180
           IRLCG+L++  LAMRVFT MEFQGV+PTVTAFNSLIE CISSHNMITAF +FE+MKNS++
Sbjct: 121 IRLCGELQNVPLAMRVFTAMEFQGVQPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSES 180

Query: 181 FKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240
            KPN DTF+YFIS F+K  DVNSM+AWYSA +AFEFS DLRTYEALIHGSVKSKCFDFAV
Sbjct: 181 SKPNADTFFYFISAFAKRHDVNSMEAWYSANRAFEFSADLRTYEALIHGSVKSKCFDFAV 240

Query: 241 KCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVW 300
           +CF+EMMLS IVPNAIIL+NMLEG CKRK+ DE+KKFL VVLD GWEINWNVVEKFIP+W
Sbjct: 241 RCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW 300

Query: 301 FESGELEGMKEIL 314
           FESG  +G +  L
Sbjct: 301 FESGRRKGWRRSL 313

[Close]

BLAST of IVF0017941 vs. NCBI nr
Match: XP_008466249.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g09060-like [Cucumis melo] >KAA0038720.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK31332.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 648 bits (1671), Expect = 2.39e-234
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0


Query: 1   MASTGKRVLTLARNVSFSIPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60
           MASTGKRVLTLARNVSFSIPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV
Sbjct: 1   MASTGKRVLTLARNVSFSIPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60

Query: 61  KSVLDSQENGFLCSSRLSLNDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINL 120
           KSVLDSQENGFLCSSRLSLNDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINL
Sbjct: 61  KSVLDSQENGFLCSSRLSLNDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINL 120

Query: 121 IRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKN 180
           IRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKN
Sbjct: 121 IRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKN 180

Query: 181 FKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240
           FKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV
Sbjct: 181 FKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240

Query: 241 KCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVW 300
           KCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVW
Sbjct: 241 KCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVW 300

Query: 301 FESGELEGMKEILTKINKSNSATDDIQS 328
           FESGELEGMKEILTKINKSNSATDDIQS
Sbjct: 301 FESGELEGMKEILTKINKSNSATDDIQS 328

[Close]

BLAST of IVF0017941 vs. NCBI nr
Match: XP_004136433.1 (pentatricopeptide repeat-containing protein At1g12775, mitochondrial [Cucumis sativus] >KGN60201.1 hypothetical protein Csa_002233 [Cucumis sativus])

HSP 1 Score: 577 bits (1488), Expect = 1.38e-206
Identity = 293/320 (91.56%), Postives = 301/320 (94.06%), Query Frame = 0


Query: 1   MASTGKRVLTLARNVSFSIPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60
           MASTGKRVL LARNVS S+PLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV
Sbjct: 1   MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60

Query: 61  KSVLDSQENGFLCSSRLSLNDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINL 120
           KSVLDSQENGFLCSSRLSLN LVTSLISSS  KKAQLVLEWKLE MSK+NE D D YINL
Sbjct: 61  KSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLEWKLENMSKKNERDLDFYINL 120

Query: 121 IRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKN 180
           I LCGKLR+S LAMRVF VMEFQGVKPTVTAFNSLIEACISS+NMITAF IFEVMKNSKN
Sbjct: 121 ICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKN 180

Query: 181 FKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240
           FKPNTDTFYYFIS F+KL DVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKS CFDF V
Sbjct: 181 FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGV 240

Query: 241 KCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVW 300
           KCFEEM+LSDIVPN IILENMLEGLCKRKNFDEVKKFLNVVLDNGWEI+WNVVEKFIPVW
Sbjct: 241 KCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW 300

Query: 301 FESGELEGMKEILTKINKSN 320
           FESGELEGMKEILTK+NK N
Sbjct: 301 FESGELEGMKEILTKLNKWN 320

[Close]

BLAST of IVF0017941 vs. NCBI nr
Match: XP_038897030.1 (pentatricopeptide repeat-containing protein At1g12775, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 531 bits (1369), Expect = 2.31e-188
Identity = 272/326 (83.44%), Postives = 290/326 (88.96%), Query Frame = 0


Query: 1   MASTGKRVLTLARNVSFSIPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60
           MA TGKRVL LA + S  IPLQ QQ H+PL FR F STDPS  I+NPLLL+LLQEPTSSV
Sbjct: 1   MALTGKRVLALAGSGSSRIPLQLQQAHFPLCFRRFVSTDPSNPISNPLLLRLLQEPTSSV 60

Query: 61  KSVLDSQENGFLCSSRLSLNDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINL 120
           KSVLDSQEN FLCSSRLS N LVTSLISSS PKKAQLVLEWKLEKMSK NE DPD YI+L
Sbjct: 61  KSVLDSQENAFLCSSRLSFNTLVTSLISSSSPKKAQLVLEWKLEKMSKENERDPDFYIDL 120

Query: 121 IRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKN 180
           +RLCG+L++S LAM VFTVMEFQGVKPTVTAFNSLIEACISS NMITAF IFEVMKNS++
Sbjct: 121 MRLCGELQNSPLAMCVFTVMEFQGVKPTVTAFNSLIEACISSRNMITAFSIFEVMKNSES 180

Query: 181 FKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240
           +KPN+DTFY+FI  F+KL DVNSMQAWYSAKKAF FSPDLRTYEALIHGSVKSKCFDFAV
Sbjct: 181 YKPNSDTFYHFIFVFAKLHDVNSMQAWYSAKKAFGFSPDLRTYEALIHGSVKSKCFDFAV 240

Query: 241 KCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVW 300
           KCFEEMMLS IVPN IILENMLEGLCKRKN DEVKKFLNVVLD GWEINWNVV KF P+W
Sbjct: 241 KCFEEMMLSGIVPNTIILENMLEGLCKRKNLDEVKKFLNVVLDKGWEINWNVVAKFFPIW 300

Query: 301 FESGELEGMKEILTKINKSNSATDDI 326
           FESGELEGM+EILTKINKSNSA + I
Sbjct: 301 FESGELEGMEEILTKINKSNSAVNGI 326

[Close]

BLAST of IVF0017941 vs. NCBI nr
Match: KAG7024539.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 485 bits (1248), Expect = 5.28e-170
Identity = 243/319 (76.18%), Postives = 274/319 (85.89%), Query Frame = 0


Query: 1   MASTGKRVLTLARNVSFSIPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60
           MA    RVL LA+  S  +PL+ Q+PHY  I R F STDPS SI NPL+L+L+QEP+SSV
Sbjct: 1   MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSV 60

Query: 61  KSVLDSQENGFLCSSRLSLNDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINL 120
           KSVLDS EN FL SSRLS   LVTSLISSS PKKAQL LEW+LEKMSK NE DPD YI+L
Sbjct: 61  KSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALEWRLEKMSKENERDPDFYIDL 120

Query: 121 IRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKN 180
           IRLCG+L++  LAMRVFT MEFQGVKPTVTAFNSLIE CISSHNMITAF +FE+MKNS++
Sbjct: 121 IRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSES 180

Query: 181 FKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240
            KPN DTF+YFIS F+K  DVNSM+AWYSAK+AFEFS DLRTYEALIHGSVKSKCFDFAV
Sbjct: 181 SKPNADTFFYFISAFAKRHDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAV 240

Query: 241 KCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVW 300
           +CF+EMMLS IVPNAIIL+NMLEG CKRK+ DE+KKFL VVLD GWEINWNVVEKFIP+W
Sbjct: 241 RCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW 300

Query: 301 FESGELEGMKEILTKINKS 319
           FESGE EGM+EILTK+N++
Sbjct: 301 FESGEAEGMEEILTKLNEA 319

[Close]

BLAST of IVF0017941 vs. NCBI nr
Match: XP_022975914.1 (pentatricopeptide repeat-containing protein At2g37230-like isoform X1 [Cucurbita maxima] >XP_022975915.1 pentatricopeptide repeat-containing protein At2g37230-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 484 bits (1245), Expect = 1.51e-169
Identity = 243/319 (76.18%), Postives = 274/319 (85.89%), Query Frame = 0


Query: 1   MASTGKRVLTLARNVSFSIPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60
           MA    RVL LA+  S  IPL+ Q+ HY  I R F STDPS SI NPL+L+L+QEP+SSV
Sbjct: 1   MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSV 60

Query: 61  KSVLDSQENGFLCSSRLSLNDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINL 120
           KSVLDS EN FL SSRLS   LVTSLISSS PKKAQL LEW+LEKM+K NE DPD YI+L
Sbjct: 61  KSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALEWRLEKMNKENERDPDFYIDL 120

Query: 121 IRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKN 180
           IRLCG+L++  LAMRVFT MEFQGVKPTVTAFNSLIE CISSHNMITAF +FE+MKNS++
Sbjct: 121 IRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSES 180

Query: 181 FKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240
           FKPN DTF+YFIS F+KLRDVNSM+AWYSAK+AFEFS DLRTYEALIHGSV SKCFDFAV
Sbjct: 181 FKPNADTFFYFISAFAKLRDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAV 240

Query: 241 KCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVW 300
           +CF+EMMLS IVPNAIIL+NMLEG CKRK+ DE+KKFL VVLD GWEI WNVVEKFIP+W
Sbjct: 241 RCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW 300

Query: 301 FESGELEGMKEILTKINKS 319
           FESGE EGM+EILTK+N++
Sbjct: 301 FESGEAEGMEEILTKLNEA 319

[Close]

BLAST of IVF0017941 vs. TAIR 10
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 2.4e-14
Identity = 57/215 (26.51%), Postives = 93/215 (43.26%), Query Frame = 0


Query: 103 LEKMSK-RNESDPDLYINLIRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACIS 162
           L+KM K + E+D  +Y  +I      ++   A+ +FT M+ +G++P V  +NSLI    +
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302

Query: 163 SHNMITAFGIFEVMKNSKNFKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLR 222
                 A  +   M   K   PN  TF   I  F K   +   +  Y         PD+ 
Sbjct: 303 YGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362

Query: 223 TYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVV 282
           TY +LI+G       D A   FE M+  D  PN +    +++G CK K  +E  +    +
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 422

Query: 283 LDNGWEINWNVVEKFIPVWFESGELEGMKEILTKI 317
              G   N       I   F++G+ +  ++I  K+
Sbjct: 423 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456

[Close]

BLAST of IVF0017941 vs. TAIR 10
Match: AT3G48810.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-13
Identity = 54/247 (21.86%), Postives = 104/247 (42.11%), Query Frame = 0


Query: 80  NDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINLIRLCGKLRDSFLAMRVFTV 139
           N L+  L      K A  ++   +EK    N       IN++   G++    LA    T 
Sbjct: 250 NALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE---LAFSFLTQ 309

Query: 140 MEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKNFKPNTDTFYYFISEFSKLR 199
           M  +G  P +   +SL++ C        A  ++  M      +PN   +   +  F    
Sbjct: 310 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 369

Query: 200 DVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNAIILE 259
           ++    + +S  +    SP++RTY +LI+G  K    D AV  + +M+ S   PN ++  
Sbjct: 370 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 429

Query: 260 NMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVWFESGELEGMKEILTKINKS 319
           NM+E LC+   F E +  + ++       +      FI    ++G L+  +++  ++ + 
Sbjct: 430 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 489

Query: 320 NSATDDI 327
           +    +I
Sbjct: 490 HRCPPNI 493

[Close]

BLAST of IVF0017941 vs. TAIR 10
Match: AT1G63130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 7.6e-13
Identity = 64/251 (25.50%), Postives = 106/251 (42.23%), Query Frame = 0


Query: 81  DLVT-SLISSSKPKKAQLVLEWKLEKMSKRNESDPD--LYINLIRLCGKLRDSFLAMRVF 140
           DLVT  ++ +   K+  + L   L K  ++ + +P   +Y  +I      ++   A+ +F
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279

Query: 141 TVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKNFKPNTDTFYYFISEFSK 200
           T M+ +G++P V  +NSLI    +      A  +   M   K   PN  TF   I  F K
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVK 339

Query: 201 LRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNAII 260
              +   +  Y         PD+ TY +LI+G       D A   FE M+  D  PN + 
Sbjct: 340 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 399

Query: 261 LENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVWFESGELEGMKEILTKIN 320
              +++G CK K  DE  +    +   G   N       I  +F++ E +   +I+ K  
Sbjct: 400 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN-AQIVFKQM 459

Query: 321 KSNSATDDIQS 329
            S+    DI +
Sbjct: 460 VSDGVLPDIMT 468

[Close]

BLAST of IVF0017941 vs. TAIR 10
Match: AT1G63400.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-12
Identity = 56/215 (26.05%), Postives = 90/215 (41.86%), Query Frame = 0


Query: 103 LEKM-SKRNESDPDLYINLIRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACIS 162
           L KM + + E++  +Y  +I    K R    A+ +FT ME +GV+P V  ++SLI    +
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 307

Query: 163 SHNMITAFGIFEVMKNSKNFKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLR 222
                 A  +   M   K   PN  TF   I  F K   +   +  Y         PD+ 
Sbjct: 308 YERWSDASRLLSDMIERK-INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 367

Query: 223 TYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVV 282
           TY +LI+G       D A   FE M+  D  PN +    ++ G CK K  DE  +    +
Sbjct: 368 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 427

Query: 283 LDNGWEINWNVVEKFIPVWFESGELEGMKEILTKI 317
              G   N       I  +F++ + +  + +  ++
Sbjct: 428 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461

[Close]

BLAST of IVF0017941 vs. TAIR 10
Match: AT3G09060.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 3.8e-12
Identity = 62/236 (26.27%), Postives = 101/236 (42.80%), Query Frame = 0


Query: 33  RGFFSTDPSISITNPLLLKLLQ-EPTSSVKSVLDSQENGFLCSSRLSLNDLVTSLISSSK 92
           R  F  +P+I   N LL   ++ +    V+S+    E   +  +  + N L+       +
Sbjct: 105 REIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKE 164

Query: 93  PKKAQLVLEWKLEKMSKRNESDPDLYINLIRLCGKLRDSFLAMRVFTVMEFQGVKPTVTA 152
            +KA+  L+W  ++  K +       IN +   GKL D   A+ +F  M  +GV P VT 
Sbjct: 165 FEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDD---ALELFDEMSERGVAPDVTC 224

Query: 153 FNSLIEACISSHNMITAFGIFEVMKNSKNFKPNTDTFYYFISEFSKLRDVNSMQAWYSAK 212
           +N LI+  +   +  TA  +++ +    +  PN  T    IS  SK   V+     +   
Sbjct: 225 YNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERM 284

Query: 213 KAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMLSDIVPNAIILENMLEGLCK 268
           K  E   DL TY +LIHG   +   D A   F E+       + +    ML G C+
Sbjct: 285 KQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR 337

The following BLAST results are available for this feature:

BLAST of IVF0017941 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQ14	3.3e-13	26.51	Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop...	[more]
Q9M302	1.7e-12	21.86	Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX...	[more]
Q9CAN0	1.1e-11	25.50	Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidop...	[more]
Q9SH26	1.8e-11	26.05	Pentatricopeptide repeat-containing protein At1g63400 OS=Arabidopsis thaliana OX...	[more]
Q9SS81	5.3e-11	26.27	Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX...	[more]

BLAST of IVF0017941 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E5Z9	2.3e-182	100.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CS56	2.3e-182	100.00	pentatricopeptide repeat-containing protein At3g09060-like OS=Cucumis melo OX=36...	[more]
A0A0A0LJI4	3.8e-161	91.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889090 PE=4 SV=1	[more]
A0A6J1II25	5.7e-133	76.18	pentatricopeptide repeat-containing protein At2g37230-like isoform X1 OS=Cucurbi...	[more]
A0A6J1FC94	4.0e-126	74.12	pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isofor...	[more]

BLAST of IVF0017941 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466249.1	2.39e-234	100.00	PREDICTED: pentatricopeptide repeat-containing protein At3g09060-like [Cucumis m...	[more]
XP_004136433.1	1.38e-206	91.56	pentatricopeptide repeat-containing protein At1g12775, mitochondrial [Cucumis sa...	[more]
XP_038897030.1	2.31e-188	83.44	pentatricopeptide repeat-containing protein At1g12775, mitochondrial-like [Benin...	[more]
KAG7024539.1	5.28e-170	76.18	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]
XP_022975914.1	1.51e-169	76.18	pentatricopeptide repeat-containing protein At2g37230-like isoform X1 [Cucurbita...	[more]

BLAST of IVF0017941 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62930.1	2.4e-14	26.51	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G48810.1	1.2e-13	21.86	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G63130.1	7.6e-13	25.50	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G63400.1	1.3e-12	26.05	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G09060.1	3.8e-12	26.27	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 44..202 e-value: 7.6E-18 score: 66.5 coord: 203..325 e-value: 5.3E-15 score: 57.2
IPR033443	Pentacotripeptide-repeat region of PRORP	PFAM	PF17177	PPR_long	coord: 110..304 e-value: 3.2E-9 score: 36.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 222..255 e-value: 8.4E-7 score: 26.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 219..253 score: 9.930995
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 113..147 score: 8.692369
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 34..323
None	No IPR available	PANTHER	PTHR45613:SF360	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 34..323

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0017941.2	IVF0017941.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding