IVF0017932 (gene) Melon (IVF77) v1

Overview


Name	IVF0017932
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Cytochrome c-type biogenesis protein
Location	chr06: 19137159 .. 19150300 (+)
RNA-Seq Expression	IVF0017932
Synteny	IVF0017932

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTTTCCTCCCTCTCGCAAAGTCGTTGAAATGTTTCTCACTATTTTTCTTTTCGCCGTCGTCTCTCTCCCTCAACCCCTCACGATTTTTTCGCCGCTGCCGTCTCTCTCTCAAACCGTCGCAATTTTGGCCGTCTCCCTCTTGCGAACTCCCTAAAAAAACCCTCACAATTTTGTGTCGGTGCCGTCTCTCTCTCTGGTTCGGCTTCGCACGACTTTTCCTCTCTCTCGCAAACGATCCAGCCGCGTGAACTTGGAGTTTACCTTAGCGTGAGTTGCTTCTCCTCCCTTCTCCGTCCGTTTCTGCTCACATTCATTCCTCAGTCTGTTTCATTCGCAGAAGGCTCACCAAGCATCAGGTAAAACTTTTCTTCATCTGAAACTTACATAATTATTGATTGCTACTTTTTGTTCCTTCTTTTAAATTTTTTAGGGCGGTGTGAGTGTAGAAGCTTGTAATGTGAGTATTTATAGTGGAATGAGGGTTCTCTTAGTAGCAATTTGAGTATTATAATGAGGAATTACGGCCATGTGAGGAAGGGTTGGCATTGTGAGATGTGCTTTAGGTTTAAAGAATCTTTTATATTTGTTTTACAAACTGTTTTGGTTTTCTTGTTACATTTTGGATCAGAAGAGTCGATCATTAATCTTGGTTTTGAAACTCCCGTGAACAGTATATTTTATTCTAATGGATTTTATTGGGGAAGAAAATGATTTGTTTTTTCTTACTCTCTTTTCAAGTTGAGAAGGAGAGGTTTTGAGATCTTGAAAGTGAGAAGTTTGATTTCTTGAATACAAGATATTAGGAACACCCTAGTTGAGAACTTAGAACACAAGAAATCAAACATCATTACTACTAATGTGTGAACCCCTAGTTGAAAACATGTCATGAATAGTGTTGTCTTATTGATTGTTCATCAATTTTATCCCTTTTATAAGATAAAATTTTAATGAGGCCGGCATCCAAGTTGGTAAATTTCCTGTTAAACAGAGTTAAAGTCTTTATATATATATATATATATATAGTTGATTCGAGTGTAAACTAATAGTAACAAGATTAGTAACCTTTTGAAAATAGGACTGTAGTTTAAAGACTTACTAAACTTTCTTAAGACTATAGGGATAAACTGAAATGGAAAGTTATAATTTAGCCTTTGGATTCTTATGATGTGCGTATTGTATAACTTACCTTGATCAAACTTTGTAGCCTATTCTGAAGAAAATCTTGATAGCCACTAATATTGTACTGCAACTGCCTAGTGGGAAGGTCATAAAAATTGATGTTCAAGTCATTGGTTCCTGCACTAATAACAACCAAAGCATTGCTAATAATCCTCTTACTTTCATCCACACCCACAATACCTTGAAGCCTCTGAATGTAGTTCTTGAAATGATCAATTTCATTTGTATTTTTTCTTTGATTTGCAAGTCAATTGACTGAGGCGCTCCGTGCTCATTGAATTAATATTCGGTATATTGGAAAAGTTAGCATCTATGTTCATAACGAATCACACTAACATTTTGATGTCCTTGTATTAGTGGTATGCCCTTAAATAAAGATTTACTTTGCAACTATTTTCAACAGGTTGCTGAGGGCACTAGACATTTACCCCATTTATGGGACCTTTGTTACAATAAGATTACAGTTAGATCTGCAAAGCACATCCTCAAGTTGCTAAATCTAATTTATTCCTCCTTTTCTTACTATGATATTTATTACTACGGAGTGCATTATGCACTTTCTCAAAGCAATTTTGATATGTAGAATTTTATAGATTCTCCATGTTTGATAATTCAATCTGGCTATTTATGGAATTTGAGACGATGTGTTTCTCATGTTGTGGTTGTAAGTCTTACCTGCAATTAATGAAACGAACAGGTGTATTTTCATTCCTATTATTTCTTTTTTTTCCATTATTTTTAACGAAAATTAAAGCTCTTGCCTGATATCAAACACATTTTAATCTCTGATTGTTAAAATGCAACAATCTCTGATTGCTAGCTCTTCTTCGTTTTATTACACTTTTTACAGTTGCTTATTGCATTAACATAATCATTTTTAATCTCTGATTGTTACCCTTTCTTCATTATGCCAATATTAGAATTATGGTTTCTCATTGGAAAAAAAACAAACAAATGTCGTATGAATTTGCTTCTTTATTGATTCAATTTCAGTAGAATATTAAGGATTGAGTATGTCTCAATCCTCTGTACAAGCTAATTTCTGTTCCTCTCTCTCTCCAGAAGAATTCAGAAAAAACATGTTCTTACAACAATCCCCCCTTTCCTGCCCAAAAGACAAGCACTCTTATACTCACTTTTCCCGCCCACCGACCTACTTATATCCCACGTGTTTTTATTTAAAAAAATCTATTTCTTCCTTCTACTGTACACTTGCCTAATAAGGGGTCTAACATTACTTTCCCCTTTTAAATTCACCTTGTCCTCAAGGTGAAAAGTTGGGTATTTTAACTGCATTTCATCATAAGACTCCCAAGTAGCTTCATTGCCTAGCCACGGTCTTACGATATTCAACAGCTTCTTCCGGAATAGATTTCCACACATAATTCTCATCAACAAACTGAATAGTTGGCTGTGAATCCTCATGCTGTCCAACTAATTTTCTCAACTGTGATACATGAAAAACGGGATGAATTTTTGAACTTTCTGGTAACTGAAGGCGGTAAGCAACAGGCCCTTTCTCTACAATTTTATACGGCCCAAAAAACCGAGGAGCAAGCTTTTCATTTCGTCTACTATGCACAGTAACCTGTTGATAGGGTCGAATACGCAGAAACACATAATCACCCACACAAAATTCTACATTTCTCCTTTTACGATCCGCATACACTTTCATTTGTTCTTGTGCTAAGCGCAAATGTTCACGCAAAGAAATCAAAACAACATCCCTTTCTTGCAACATCTCTTCAACAGTTGAGTTCTTAGAAAGCGAGCTTCCATAAGACAAAATAGTAGGAGGCTGTCGTCCATAAACAATCTGAAATGGAGTCATGCCGATAGACCGTTGGAAGGTGGTATTATACCAATATTCCGCCCATGGCAGCCACTTAACCCACTCCTTAGGTTTCTCATTACAAAAGCACCGTAAGTAAGTCTCCACTCCTCTGTTGACAACCTCAGTTTGGCCGTTCGATTGAGGATGATAGGCTGTACTTTTATTCAGTTTAGTGCCTGATAATCGAAACAATTCAGTCCAGAAATGACTAAGAAATATCTTGTCTCTATCTGACACAATGGACAAGGGAAATCCATGCAACCTTACTACTTCTTTCACAAATAACTCTGCCACCAGCTTAGCAGTAAATGGATGTTTCAGGGGTAAGAAATGTCCATATAATTTACTTAATCTGTCTACCACAACCAAAATCACTTCAAATCCACTAGATTTTGGAAGGCCTTCCACAAGATCCATTGAAATATCGCTCCATATGGACTGAGGAATCTCCAACGGCACCAACAAACCAGCCGGGGATAAAGCCAATGATTTACTTCTTTGGCATGTTAAACACTCTTCACAGTGTTTTTTAATATCAGCCTTCATCCCATCCCAATACAATTCAGCGGCTACTCGTTTATAAGTTCTCAAAAATCCAGAGTGACCCCAACCACAGAATTATGGAAAGTGTCTAAAATTACTGGTATTAAAGAAGAATGCTTTAAAATTACCAGTCGGTTCTTGTACATCAGTAAGCCATTTTGCAATGAATATTTGCTCTCAGTTGGTTCCTCAAATTGCTCAATTTGCTTTACAATCTTCTCATACTTTGGATCTTGGGATACTTCCTTTTTAATTACTTCCTGATCGATAGTAACTGGTACGAACAGCCCAAACAAATGTACTTCGTCTGGCTTTCTGGATAATGCATCAGCTGCTCTATTTTCAACTCCCGGCTTGTAAACTACTTCAAATGAATAACCCAAAAGTTTGGTTATCCATTTTTGATATTGAGGCTGTATTATCCTCTAATCTAACAAAAATTTCAGTGCTCTCTGATCTGTTTTCACTTTAAATTTTCCTATCAACAAATAAGGTCGCCATCTTTGTACCACCAATACAACAACAGCCATAAGCTCCCTTTCATACACTGGCCGGGCCCTATCTCTCAAAGCTAACGCATGGCTATAATATGCTATCGGCCTTCTGTCTTGAACTAAGACCGCTCCAATTCCAAAACTAGACGCATCAGTTTCTATTTCAAACGGCTGATTGAAATCTGGAAGGGCTAATACCGGCAAGGATAGCATCGCTGATTTCAACTTGTCAAAAGCCATGGTTGCTTCTTCAGTCCATCTAAACCCTCCCTTCTTTAACAACTAAGTTAAAGGAGCAGCAATAGCTCCATAATTGCGCACAAAACGACGGTAATACCCCGTTAAGCTCAAGAATCCTCTGATTTCCTTTATATTCGTGGGTTGTGGCTAGTTGGATATAGCTCTAATCTTTTTCGGGTCCACTGCCACACCTTCTCCAGAAATCACATGACCCAGATACTCTATTCTTTTCTGTGCAAAATGACACTTCTTCTGGTTAGCATATAGTTCATGTTGCTGTAAAATTGACAACACTTTTCCCATGTGCACTACATGATCAGCCTCATTTTTACTATATACTAGTATATCATCAAAAAAAACCAATACAAATTTTCTTAAGAATGGCTTGAAGATAGTATTCATCAAAGGCTTGAAAAGTAGCCGGTGCATTGGTCAACCCGAAGGGCATTACTAAAAACTCATAATGTCCTTCGTGTGTTCGGAAAGCAGTTTTCTCTACATCCTCATCGGCCATTCTGATTTGATGATATCTGGACTTCAAATCAATCTTGGAAAACAGAGTTGCTCCACAAAGCTCATCAAATAATTTTTCTACTACCGGAATAGGAAATTTATCCAGAATCGTGGCGTTATTGACTACTCTATAATCTACACAAAAACGCCAGCTACCATCCTTCTTCTTGACCAATAAAACAGGACTAGAATAAGGACTGGTGCTCGGTCTTATTACCCCAGAATTCAACATTTCTTTCACCAACTTCTCCATCTCTTCTTTTTGATGAAAACCATATCGATATGGACGAACATTAATGGGATTGGTTCCCTTCTTCATGTGGATATGATGTTCTATCTCCCTTCGTGGTGGTAGTTTTTCCGGCCACTCAAAAACATCTTGGAACTGACTAATGACAGAGTTGATCGGGCCATTGCTCAAAACTTCTGCATTTTGCAAACAGCAGTCATTACTCTCTACAGCTTTCACTTCTATTGATCGACATTCAATCAAGAACCTGGCATCCTTATCTCCCCAGTTTTTCATCATATTTTTGAGGCTGATCCTTGCTTTCGTTAGACTAGGATCTCCCTTAATATTCATAGATTTCCCATCATCAGAAAAAGTCAATGACAGATTTTTCCAGTCTACTGTAGTCACTCCTAGAGAATATAGCCATTGCATACCCAAAATTACATCAACACCACCAAGTTCTAGGGGCAGGAAATCCTCTACTATCTTCCAATTGTTCAACTGCACTTCCAATTTTTCACAGATTCCCTTACCTTGTACTGCAGCCCCAGAACCTAAGATCACTCCATACTGTGAGGTTTCTTTGATGGGTAAAATGAGCTTCTTCACCAGCTTTTCTGACACAAAGTTGTGCGTCGCTCCACAATCGATCAATATAATCACATCCTCTCCCATCAGTTTACCTCTCACTTTCATAGTCCCGGGATCATTTAATCCAACTACTGAGTTGATTGATAATTCAACCACAGTAGTAATATCCTCATTGATTTCTATGCGGCCCAACTCCTTTTTTTCTTTTTTTCTTCTTCTACAATTTCGTATTCTCCTTTATCTTCTGTCACCACGAACATCCTCAATTCACGTTGTTCTTTCATTTTACACTTGTGGTCTGCAAAATACTTCTCATTGCAACGAAAACACAATTCTTTCTCTTTCCTGGCCTAAAACTCAGCATCGGGTAGCCTTTTATAAGACTCTTCCCTCCGATTTTCATTTGGACCGGAACTCCTCAAGGTGATGGTGCGGATCGGAAATGAAGTATTTCCTTTACTCTCCCCTGCTACACTACTGGAAGCAACTTTTCCATTTCCTGCCCACCGACCTACTTATATCCCACGTGTTTTTATTTAAAAAGATCTATTTCTTCCTTCTACTGTACACTTACCTAATAAGGGGTCTAACAACAAACTATTCTTTGCTGATAAAGGTAGTCATTTAGGTAATGAATATGGTTAACACCTTTTGCAATTGACAATGTTACAAAAATGTAGTCATTTTATGTTACTTCCAAATTCAAAGCTTGTGGTACAAAATAATCATTTTTTTTCCAATGACAATATTGTTTTTGCATTGCTCTTGACATTTGCTTGTGTAACATATCTATCTTGGTTATGTGGATTGTTATTCCTGGTTTCTTATCAGAAAAAGATAAAAGTAGTTTTTGTGGTAATGCTTGATTATGAGACGGAGTTGTGATATATTAATTTCTTTGGGGATAATAATTAATTAATTATGAATGGTGACTGTTTAATTTAGTAAAGTGGTAGAAAGCAGATGGTCTTCTTTCAGATTCGTGGGTGTTGTAACCTTTATGAGTTTGGTCGAAGTTGAAGCTTATTGCTCTAGAACTCATCTTCAAAGAAGGGTTATTTACCATAGATGATCACACAAGTTACACACAATGTTACTATAAGATCAATAACAAGAAATAAAATAGGTAGAAAAGAGAGTAGAAAGAAACATAAGGTTTAACAAGGAAGAAGGGTAAAAATAAGTCTGTCTTATTATATACATTGGGCATGACATCAAGTGTGAGATAAAACTAATTGATAACTGAATAACAAACTTCAGTTTATATGTGATACTCCCCTGATTGAAAATATTCAACAAACCCATCTTGGATAACAATGATGGATACAAAACAATAGATGTAAGTGGCTTTGTGAGAGTATCTACGAGTTGAATTCAGGAATTGATTGGTAAAAATCTTCAAGAAACCGAACAGAACTTTCTCTCTTATGAAGTGACAATTGAGTTCTATATGTTTTGTTTGTTCATGAAAGGTTGGATTAGAGGCAACGTGGACAACAACTTGATTGTCACAAAATAAGATAGTGTTTGAGGAAGGAAGTTGCAAATCTTTTAACCAGGACTGTAACCAAATCAGTCCACACATTGTCAACACAATGGATCAATATTTTTCATCTGCTGAAGATCTTGAGACTACATTCTACTTCTTGGACTTCCATGACACTGAGCATCTCCCAAGAAAATGCAAAATCATGGAGGTCGAACGTCGAGTATCAACACATGATGCCCACTCTGAGTTTGAATGCTTTCAATTGAAAGTTTTTGGTTGGTTGAAGAATCACACCTTGTTCTAGAGCATTTTTCAAGTACTTTAATAAGTGATGGGGAGCGGAAAGGTGAGCTTGACAAGGTTGAAACACAAATTGGCTTAGCTTGTTGACAATAAAACTAATATCCGATCTTGTTATAGTAAGATAAAGTACCTATCAATCATCCTTCAATATGTAGAGGAATCTTTCAAGGGCTCACTATTGGCCTTACTCAGTTTGAATCTAGGATCCATAGATACAGGTTCTGGTTTTCAACCAAGAAAATCAATATCTTATAGTAGTTGTAAAGTGAAATGTCTTTGGGATAGAAAAATCCCTTGAGAAGATCTTGCTAGCTTAACCCCATCAAGTATTTCAGTTCTCCTAAATCTTTTAACTTAAACTTCTTTATTTAGGAGGATCTTTAATTGTGTAATATGAGACTCATTTGCTCCAGTAATCACGATGTCGTCTGTGTATACACTAACAAGGCTAAGAAGTCAGCACCGTATGCATAGATGCATAGAGGCTAAGGTCACCTTAGTTTCCTCAAAGTTGGTTCCAATGCCTTAAAGTATGGTTCCATATCAAAGATGAAAATTTGAAGCTCTTTAGCATTGCAGTTCCCATTGAAAGCTTTGGGTTTCGGGATCTTGAACTTCGGCGAAACAATACATGCTTGATTCGTGGTCTGGTTCCTATTGATCGCATTGATAAATTTACTTGCACTTTCATCTCGGCCATTTCGACCTTGATTGTCTCTAACGTGGCTCTAAAGTTGCCTGAAAGATCGCTAAGACAACTTTAGCATGGCCTTCTGGGAATAGTCAAGCTTTTCGACACACTTTTCCATGTGTGTGACTAAACTCAAAGGGCTACTCCCATGTTCAAAACTACCCTCTTGGGCGGTTTTATGTTCTATTGAATCAATCCTCAACATCAATTCATTCATGGGTAGTTCGTCTACCTTAGCATTCAATGCATCTAATTCTCTAACCTTTTCGTCCAACCCATCCAGTCAGGTCTAGAGAAATCTTACTTCGTCTAACAATTCTCTCATATACAAGAATTTCTCTTCAATCTCAGTCAGTCGCTCAGACTGCGACTTCGACAGTTGTTTCATTGTTGACATAATTGCATCTCACTTAGACAAGGAGCTAACAAAGCTTTGATACCGCTTGTCACAATCGCAACCTTTCATATATTGGACGAGCGATTGCCTGGCACTTGTCCTAACTCGGTGTACAAGTCAGCCGTACTAAATTTGAAAGTCGCGGGCAAACTCACTATATGATATTGTCACGTCTTGCCTCGCACACCATTCTTAAACTTGTCGTGTGAAACGAAACGTGATTTAAAAACTTTGAACCATTAACCATTACCATGCAAACTTAACAGTAATTAACAACAACTTTAGAAATGCAGCACAACTCTCAAAATAAGAGATTAACAAAGAATGCTAAAAGCCTTCACAGTCTTCAGTTCTCGACAATCGCTTAGCTCTTCAACTCGATCGCTTAGTCTCGATTGCTTACCTTTCTAAAGATCGCTTAGCTTCTTACAATCTGGGAGAGGGAAAAACCTAAAACACAAGTCAAAAGACTTCGTGAGTGATATTTTTGAAATCCTTTGGGAATACATTTCAATCATTAAAAATTCGTTTTCATTTCATAAACATGCTTTCAACGTCTCATTTCAATAAAATATAAAACACACATTAGTCATCCACATTCCTTTTCACCAAAAACATGAACCATTCCTTACGCTAAGACTCAGCATCTTGCATTTAGACTAATGTAATGTCCTTTCCATCAACAGCATCCGGAAATAACCCTGGTTCACTTCTCATTGCTCAAGCTAAACGCAATACACATCTTTTAATGTGCGTTTGGGGGAAGGGTTGAGTGAGTTATGGAAGGGTTAGTGTTATGATAAAACTAGTGTTATGATAAACCTAGTTTTATCATAACCCTTGTTTGGGGGAAAAGTTTAGAAATGTAGTTTTGTGATAATAAGTGTTTAGGAGAAGAGTTACGTGGGAAGGGTTATGATAGTGTTATGAATAAAATGTGTTTGGGGGAAGGGTTATGTAGGTAGGTTTATGGGGTTTTTTGATAAGATGTGTTTGGGGGAAAGGTTATGTGGGTAGGTTTATGGGGATTTTATGATAAGATGTGTTTGGGGGAAAGGTTATGTGGGTAGGGTTATGAATTTTTTTTTACTTATTAATTTTTTTTTCCAATTCACATTGTAGATGTAAAAAAAAAATTCTTATTTCATATTTTTTTATAACGAAAGCGTTGAAAATATATATTGTAACAGTTTGGCTTACTCTCTTAAACGACAACCTCTATCTCTAATGTTATTAAATTAGTAAATACAGTTGACCAATTTTCAAATAATTTCTTAACAAATTCTACTAACTTAAGACTAAATAGAATCTCATGTAACATGATAAATTGTTCTGATGAAAGGCACAACAAAAGTAAGACTTGTTTGCACTCACTTCGGATATGTTATGCAGTAACCACGAACAAAATTATAGGGCATATTACCATTATAGGGCATATTACCATTATAGGGCATATTAAAATGGTACTGACCATAGTAAGGAGTAAAGAGGCATTTTACAGTTACTCCATTTTTTTAGCTGAACAGAGAAATGCACTATTAAATCTTTATTTTTGATTAATCTAAAATTCCAAAAGTGGATTGCTCCAAGCCTCGACCGAGTTATCTTGTGAACATTGCCTATATGATACCTTGTACTCTGGAAAATCTCACACGCTCATTTGTATATTTGTGGATGTTCTATGTATGCTCAGTGCCTGTACTAGCAATGTAGAACCTATTCTCCAAATGACTAGTTTGTCAGTTTTTATTATCTTTGTTACTTTTAAGAAGGTTTTGTCACAACTCATAAATGCTACCATTAGCGGAGATAAAACCATTTGCACATTCCACCTCCAACTCCATTTCAATTGTGCCTGGACTTTAATGTAAACTTAGAACGTCTGAAACCTTTCTTTTAAAGGCAGAACACATCCTTCTATTATTTTTATACAATCTAAACGTAAAACTAAGAGAACTTTCAGATCAAGAAGAATGTGTGCTACCTTCCACAATTCTTAGTCTATTTCTCTCTTCAGCCAAAAGAACAGAGCATAGCCAAGACTAAGAAAATAAGGCAAAAGATTTTAATCCATTAATCAACCGCAAAGAACGATCTTCTTCTTCTTCCATAACCTTAGTACCAAACACGGGTTACTAACCCACAGTGTTAAACCGTCCCCCAAACACCCCCGCCCCGCCCCGCCCCGCCCCTATGCATTATCTTGTCTCATTCCACCATACAGACCTTTTCTACATGGCCGCCTTTACTCATTATGTGCAAATAATAATTTGGAATTGTCTGGATGAGTGCGTGGTGAGACACACTCGATGTTATTTAGTTGAAAATTATGGAAGTGTGATTTTCTTCTATTTTCCAGGTGTGAATAGTCCTTTTTTGGGAGAGACTCTGTCGAAATTTTTATAGAATTTTTTGAAAGGTGTTTTACTAATCTTATATTGGAAAAGAAATGTTTTTAAAGAGTAGAATCATACCACGATCTAGGTTAGATGGGAAAACCTAGAACGGGATGACATGTGTTTGGTTTCTTAATCTCAGGAATTTTATTCCAAATGCCCGAATATCGGTTTGACTTCAAATGTCAAACCCCCTTGATTTCAAACCCATGGGTCAAACACCCTCTCGATTCTTTGATTCTATAGATCCACCACCCTTTTGGCCTTATTATTCTATCATTTTTTCTTTGGTGAGGTTGATTGAGGTGAGCCACCTCTCGCTGGATTGTCCCAACGAGAGTTCATCTCTTCCATCCTACGATAGTAATTTCTAACTGGAATTTGATCTGCTACAGTTTTCTCTTTGACTTGCTTGATTTTTATGAAAGGTTTATATTTAACTTGCAGTTTGCATTCAATGATTTCTGGGTATTTTCTTGCGTTGCAGTTGGGTCTGGGCTTAAGGTTTCAGAGTGTCTAAAATGGAGATCGATGAGGATGCATTGAAAAAAACCCAGCTGGTGGAAGCCCGAGCAAGAAATATTAGTCACAATGTTAGGTGTATTGAGTGCGGTAGTCAATCCATTGAAGATTCACAAGCAGATATTGCGATTCTCCTTAGAAAGGTATCGGTTATTTAGGTTAACTTCAATCTAAAAAATTTAACAACACTTCTTTCTCTTTTGTGCAAATTGCCTTTTTTATTTTTTTTTTCTCTCTTTTCAACGATGAAATTTAGAAATATGGATACTAGATTTCTGATGAAAATGCCTTGAAGAAGTGTAGTTACTAAGGCTTGTTTTAATTGTGATTATAATACTAATTTACTCTCACAAGTAAAGGAGGAGAGGATGCAGTTACTGAAGTTGAAGTTCAATGATTCTTCTCGAGCCGAATAATCCAAATAACTAGAAAACCATCTCAATCCAAAAAAAATTTATAACCTGTCAATGGGGGCATACTTTGAGCCAGAAATCCTGCGATCTCTCTGGCAAGTACCAATGGAGGTTGAGAGTTTCACAAAAGATGGTTCATGTAAATGGGAAATATAGTATTTAGTGGTTTTCTATTTCATAAACTACTTGAAGGAAATAGAAATAAATCAGGATTTTCTTTAATAAAAAATTCTTCTTTTGGATTAGTAGATTATCTACAGAATAACTATCTATGTTGTCATCCCCTTGGAAATTTTAAAATGATGCATAGTTTTCAATAACTTCATTTGATCACAGTGCCTCTTATGTCATAATGATGAATGAAAAAGATTGTTATACCAGACCTTGAATCTTTGCCACATACCGATTTCTCACAGATTTGTTAAGTTTCCTGCCTCATAATTCTTGGATGAATATTGTTTTGCAATAGATTTGCTTCACACTGGGTTGTATTTGTTATGTAACCGTAGTTGATTCGTGATGAGATTCGGTCGGGGAAAACGGACAAGGAGATCTATAAAAAGCTTGAGAATGATTATGGGGAGACAATCCTTTATACCCCAAAGTTTGACCTTCAAACTGCAGGCTTATGGCTATCACCGGTCAGTTAATATGTGTGTGAAATTCAGAATTAAGCAAATAGTTCTGCCTATTTCTTCTAATTTTAATTCTAAATATATTACACTTTGGAATAGGTGTTAGTGGCTGGTGCTGCTGTAGGAGTATGGGCTTATAGTAAGCACAAGCAAAGGTCTAATGTTCACATCATGGCTTTAAATCTGGTCAGGGGTGTTCCATTGACCCCTAAAGAGAAGCAAACCATGTTAGATCTCCTCTCACCTCCACCTTCTCAGAGAACCCCTTCTTCATGGTGGAGGAGTTGGCGTAGGCAATGAGGCAACTACTCCTTATTGCTAGCTCGAACAACAGTTCAAAGAGTTTCAGAGTATGTTGAAGATCTACAAATTAGATTACAGATCTGAAAGCATTACTATTTTTGTACTGTATTATACTCAACAATGGTTTTATGATTACTTTTGCTAGAAAAATGTTACCTACATTGTGAATATGAACTTGCACCTTACAATTCTGTTCATATTTGTTTTTCTTATGGCCAGTTTGGATGTTACCTAGTTAGGTTCATAGGTTTCTCTGAAGGAAACACACCAATGAACAGAAGTTTGGATTGCCACACAATTCTAGGTTGTCACACTATTCCTGGTCCCTATGTTCATTTAAAATTCTAAAGGATTATGCTCCAAG

mRNA sequence

CAATTTTCCTCCCTCTCGCAAAGTCGTTGAAATGTTTCTCACTATTTTTCTTTTCGCCGTCGTCTCTCTCCCTCAACCCCTCACGATTTTTTCGCCGCTGCCGTCTCTCTCTCAAACCGTCGCAATTTTGGCCGTCTCCCTCTTGCGAACTCCCTAAAAAAACCCTCACAATTTTGTGTCGGTGCCGTCTCTCTCTCTGGTTCGGCTTCGCACGACTTTTCCTCTCTCTCGCAAACGATCCAGCCGCGTGAACTTGGAGTTTACCTTAGCGTGAGTTGCTTCTCCTCCCTTCTCCGTCCGTTTCTGCTCACATTCATTCCTCAGTCTGTTTCATTCGCAGAAGGCTCACCAAGCATCAGGTTGCTGAGGGCACTAGACATTTACCCCATTTATGGGACCTTTGTTACAATAAGATTACAGTTAGATCTGCAAAGCACATCCTCAATTGGGTCTGGGCTTAAGGTTTCAGAGTGTCTAAAATGGAGATCGATGAGGATGCATTGAAAAAAACCCAGCTGGTGGAAGCCCGAGCAAGAAATATTAGTCACAATGTTAGGTGTATTGAGTGCGGTAGTCAATCCATTGAAGATTCACAAGCAGATATTGCGATTCTCCTTAGAAAGTTGATTCGTGATGAGATTCGGTCGGGGAAAACGGACAAGGAGATCTATAAAAAGCTTGAGAATGATTATGGGGAGACAATCCTTTATACCCCAAAGTTTGACCTTCAAACTGCAGGCTTATGGCTATCACCGGTGTTAGTGGCTGGTGCTGCTGTAGGAGTATGGGCTTATAGTAAGCACAAGCAAAGGTCTAATGTTCACATCATGGCTTTAAATCTGGTCAGGGGTGTTCCATTGACCCCTAAAGAGAAGCAAACCATGTTAGATCTCCTCTCACCTCCACCTTCTCAGAGAACCCCTTCTTCATGGTGGAGGAGTTGGCGTAGGCAATGAGGCAACTACTCCTTATTGCTAGCTCGAACAACAGTTCAAAGAGTTTCAGAGTATGTTGAAGATCTACAAATTAGATTACAGATCTGAAAGCATTACTATTTTTGTACTGTATTATACTCAACAATGGTTTTATGATTACTTTTGCTAGAAAAATGTTACCTACATTGTGAATATGAACTTGCACCTTACAATTCTGTTCATATTTGTTTTTCTTATGGCCAGTTTGGATGTTACCTAGTTAGGTTCATAGGTTTCTCTGAAGGAAACACACCAATGAACAGAAGTTTGGATTGCCACACAATTCTAGGTTGTCACACTATTCCTGGTCCCTATGTTCATTTAAAATTCTAAAGGATTATGCTCCAAG

Coding sequence (CDS)

ATGGAGATCGATGAGGATGCATTGAAAAAAACCCAGCTGGTGGAAGCCCGAGCAAGAAATATTAGTCACAATGTTAGGTGTATTGAGTGCGGTAGTCAATCCATTGAAGATTCACAAGCAGATATTGCGATTCTCCTTAGAAAGTTGATTCGTGATGAGATTCGGTCGGGGAAAACGGACAAGGAGATCTATAAAAAGCTTGAGAATGATTATGGGGAGACAATCCTTTATACCCCAAAGTTTGACCTTCAAACTGCAGGCTTATGGCTATCACCGGTGTTAGTGGCTGGTGCTGCTGTAGGAGTATGGGCTTATAGTAAGCACAAGCAAAGGTCTAATGTTCACATCATGGCTTTAAATCTGGTCAGGGGTGTTCCATTGACCCCTAAAGAGAAGCAAACCATGTTAGATCTCCTCTCACCTCCACCTTCTCAGAGAACCCCTTCTTCATGGTGGAGGAGTTGGCGTAGGCAATGA

Protein sequence

MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRSWRRQ

Homology

[Close]

BLAST of IVF0017932 vs. ExPASy Swiss-Prot
Match: B8AFK5 (Cytochrome c-type biogenesis CcmH-like mitochondrial protein OS=Oryza sativa subsp. indica OX=39946 GN=CCMH PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.9e-63
Identity = 115/148 (77.70%), Postives = 133/148 (89.86%), Query Frame = 0


Query: 5   EDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKEIY 64
           E+ +K+ Q++E+RARNISHNVRC ECGSQSIEDSQADIAILLRKLIRDEI+SGK+DKEIY
Sbjct: 4   EEDVKQRQIIESRARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIKSGKSDKEIY 63

Query: 65  KKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALNLVRG 124
           KKL+ DYGETILYTPKFDLQTA +WLSPV+V G A GVWAY KH+QR+NVHIMALNLVRG
Sbjct: 64  KKLQADYGETILYTPKFDLQTAAIWLSPVIVGGVAAGVWAYKKHRQRTNVHIMALNLVRG 123

Query: 125 VPLTPKEKQTMLDLLSPPPSQRTPSSWW 153
           VPLTP+EK+TMLD+L+PPP     + WW
Sbjct: 124 VPLTPREKETMLDVLTPPP---PANKWW 148

[Close]

BLAST of IVF0017932 vs. ExPASy Swiss-Prot
Match: Q6K7S7 (Cytochrome c-type biogenesis CcmH-like mitochondrial protein OS=Oryza sativa subsp. japonica OX=39947 GN=CCMH PE=2 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.9e-63
Identity = 115/148 (77.70%), Postives = 133/148 (89.86%), Query Frame = 0


Query: 5   EDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKEIY 64
           E+ +K+ Q++E+RARNISHNVRC ECGSQSIEDSQADIAILLRKLIRDEI+SGK+DKEIY
Sbjct: 4   EEDVKQRQIIESRARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIKSGKSDKEIY 63

Query: 65  KKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALNLVRG 124
           KKL+ DYGETILYTPKFDLQTA +WLSPV+V G A GVWAY KH+QR+NVHIMALNLVRG
Sbjct: 64  KKLQADYGETILYTPKFDLQTAAIWLSPVIVGGVAAGVWAYQKHRQRTNVHIMALNLVRG 123

Query: 125 VPLTPKEKQTMLDLLSPPPSQRTPSSWW 153
           VPLTP+EK+TMLD+L+PPP     + WW
Sbjct: 124 VPLTPREKETMLDVLTPPP---PANKWW 148

[Close]

BLAST of IVF0017932 vs. ExPASy Swiss-Prot
Match: Q9XI46 (Cytochrome c-type biogenesis CcmH-like mitochondrial protein OS=Arabidopsis thaliana OX=3702 GN=CCMH PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.1e-52
Identity = 103/156 (66.03%), Postives = 124/156 (79.49%), Query Frame = 0


Query: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60
           ME  ++  KK Q+++ARARNISHNVRC ECGSQSIEDSQADIAILLR+LIR+EI +GKTD
Sbjct: 1   MEKTDEERKKAQMLDARARNISHNVRCTECGSQSIEDSQADIAILLRQLIRNEIGAGKTD 60

Query: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120
           KEIY KLE+++GET+LY PKFDLQTA LWL+PV++AG       Y KH+ R NV IMALN
Sbjct: 61  KEIYSKLEDEFGETVLYAPKFDLQTAALWLTPVIIAGGTAAGIVYQKHRLRKNVDIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLSPP-PSQRTPSSWWRSW 156
           L+RGVPLTPKE+ T+LD+L PP P  +   S  R W
Sbjct: 121 LIRGVPLTPKERVTILDVLIPPSPPPQGVVSRLRRW 156

[Close]

BLAST of IVF0017932 vs. ExPASy Swiss-Prot
Match: P45405 (Cytochrome c-type biogenesis protein CcmH OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=ccmH PE=3 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 1.2e-16
Identity = 48/139 (34.53%), Postives = 77/139 (55.40%), Query Frame = 0


Query: 3   IDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKE 62
           +  D +      E RAR++S  +RC+ C +QSI+DS A +A  LR L+R+ I +G ++ +
Sbjct: 22  VQPDEIMSDPAKETRARDLSRELRCMVCQNQSIDDSDAPLARDLRLLVRERIAAGDSNSQ 81

Query: 63  IYKKLENDYGETILYTPKFDLQTAGLW-LSPVLVAGAAVGVWAYSKHKQRSNVHIMALNL 122
           +   L   YGE +L  P+F+ QT  LW L P+L+ G  + +W   + + RS   + A   
Sbjct: 82  VLDFLVARYGEFVLLKPRFERQTLLLWLLGPLLLTGGGLALWLQIRRRSRSGADLPA--- 141

Query: 123 VRGVPLTPKEKQTMLDLLS 141
               PLTP E+  +  L+S
Sbjct: 142 ---PPLTPDEEARLAALMS 154

[Close]

BLAST of IVF0017932 vs. ExPASy Swiss-Prot
Match: P45406 (Cytochrome c-type biogenesis protein CcmH OS=Rhizobium meliloti (strain 1021) OX=266834 GN=ccmH PE=3 SV=2)

HSP 1 Score: 80.1 bits (196), Expect = 2.5e-14
Identity = 49/141 (34.75%), Postives = 79/141 (56.03%), Query Frame = 0


Query: 3   IDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKE 62
           ++ D +     +EARAR IS  +RC+ C +QSI+DS A++A  LR L+R+ +++G +D+ 
Sbjct: 21  VNPDEVLADPALEARARAISAQLRCMVCQNQSIDDSNAELAKDLRLLVRERLKNGDSDEA 80

Query: 63  IYKKLENDYGETILYTPKFDLQTAGLWLSP--VLVAGAAVGVWAYSKHKQRSNVHIMALN 122
           +   + + YGE +L  P+ + +T  LW  P  +LVAG    V A  +   R         
Sbjct: 81  VISYVVSRYGEFVLLNPRLEAKTLVLWGMPAILLVAGIITLVVAARRRGAR--------- 140

Query: 123 LVRGVPLTPKEKQTMLDLLSP 142
            V G PL+ +EK+ +  LL P
Sbjct: 141 -VPGAPLSDEEKERLDRLLRP 151

[Close]

BLAST of IVF0017932 vs. ExPASy TrEMBL
Match: A0A1S4DZT6 (Cytochrome c-type biogenesis protein OS=Cucumis melo OX=3656 GN=LOC103493367 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.5e-83
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60
           MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD
Sbjct: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60

Query: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120
           KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN
Sbjct: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRSWRRQ 159
           LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRSWRRQ
Sbjct: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRSWRRQ 158

[Close]

BLAST of IVF0017932 vs. ExPASy TrEMBL
Match: A0A5A7TY95 (Cytochrome c-type biogenesis protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00810 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.5e-83
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60
           MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD
Sbjct: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60

Query: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120
           KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN
Sbjct: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRSWRRQ 159
           LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRSWRRQ
Sbjct: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRSWRRQ 158

[Close]

BLAST of IVF0017932 vs. ExPASy TrEMBL
Match: A0A0A0L351 (Cytochrome c-type biogenesis protein OS=Cucumis sativus OX=3659 GN=Csa_3G099640 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.4e-81
Identity = 153/158 (96.84%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60
           ME DEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+D
Sbjct: 1   METDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60

Query: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120
           K+IYKKLENDYGETILYTPKFDLQTAGLWLSPV+VAGAAVGVWAYSKHKQRSNVHIMALN
Sbjct: 61  KDIYKKLENDYGETILYTPKFDLQTAGLWLSPVIVAGAAVGVWAYSKHKQRSNVHIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRSWRRQ 159
           LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWR+WRRQ
Sbjct: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRNWRRQ 158

[Close]

BLAST of IVF0017932 vs. ExPASy TrEMBL
Match: A0A6J1DHL6 (Cytochrome c-type biogenesis protein OS=Momordica charantia OX=3673 GN=LOC111020546 PE=3 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.3e-76
Identity = 142/158 (89.87%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60
           ME ++DA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+D
Sbjct: 1   MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60

Query: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120
           KEIY+KLE+DYGET+LYTPKFDLQTA LWLSPVLVAGAA GVWAY+KHKQ++NVHIMALN
Sbjct: 61  KEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRSWRRQ 159
           LVRGVPLTPKEKQTMLDLL+PPP QRT SSWWRSWRRQ
Sbjct: 121 LVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ 158

[Close]

BLAST of IVF0017932 vs. ExPASy TrEMBL
Match: A0A6J1JTI4 (Cytochrome c-type biogenesis protein OS=Cucurbita maxima OX=3661 GN=LOC111488733 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.9e-74
Identity = 141/158 (89.24%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60
           ME D DA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+D
Sbjct: 1   MESDADAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60

Query: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120
           KEI+KKLENDYGETILYTPKFDLQTA LWLSPVLVAGAA GVWAYSK+KQ+SNVHIMALN
Sbjct: 61  KEIFKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAAGVWAYSKYKQKSNVHIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRSWRRQ 159
           +VRGVPLTP+EKQTMLDLLSPPP QR  S WWR WR Q
Sbjct: 121 IVRGVPLTPREKQTMLDLLSPPPPQRAASLWWRRWRSQ 158

[Close]

BLAST of IVF0017932 vs. NCBI nr
Match: XP_008452301.1 (PREDICTED: cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis melo] >XP_008452302.1 PREDICTED: cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis melo] >XP_016901245.1 PREDICTED: cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis melo] >KAA0046887.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis melo var. makuwa] >TYK03260.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 318 bits (814), Expect = 2.28e-109
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60
           MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD
Sbjct: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60

Query: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120
           KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN
Sbjct: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRSWRRQ 158
           LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRSWRRQ
Sbjct: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRSWRRQ 158

[Close]

BLAST of IVF0017932 vs. NCBI nr
Match: XP_004149299.1 (cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis sativus] >KGN56203.1 hypothetical protein Csa_010849 [Cucumis sativus])

HSP 1 Score: 311 bits (797), Expect = 8.92e-107
Identity = 153/158 (96.84%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60
           ME DEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+D
Sbjct: 1   METDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60

Query: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120
           K+IYKKLENDYGETILYTPKFDLQTAGLWLSPV+VAGAAVGVWAYSKHKQRSNVHIMALN
Sbjct: 61  KDIYKKLENDYGETILYTPKFDLQTAGLWLSPVIVAGAAVGVWAYSKHKQRSNVHIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRSWRRQ 158
           LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWR+WRRQ
Sbjct: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRNWRRQ 158

[Close]

BLAST of IVF0017932 vs. NCBI nr
Match: XP_038904619.1 (cytochrome c-type biogenesis CcmH-like mitochondrial protein [Benincasa hispida] >XP_038904620.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Benincasa hispida] >XP_038904621.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Benincasa hispida])

HSP 1 Score: 296 bits (758), Expect = 7.13e-101
Identity = 147/153 (96.08%), Postives = 149/153 (97.39%), Query Frame = 0


Query: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60
           ME DEDA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD
Sbjct: 1   METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60

Query: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120
           KEIYKKLENDYGET+LYTPKFDLQTA LWLSPVLVAGAA GVWAYSKHKQRSNVHIMALN
Sbjct: 61  KEIYKKLENDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYSKHKQRSNVHIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWR 153
           LVRGVPLTPKEKQTMLDLLSPPPSQRT SSWWR
Sbjct: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTSSSWWR 153

[Close]

BLAST of IVF0017932 vs. NCBI nr
Match: XP_022152937.1 (cytochrome c-type biogenesis CcmH-like mitochondrial protein [Momordica charantia])

HSP 1 Score: 293 bits (749), Expect = 1.86e-99
Identity = 142/158 (89.87%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60
           ME ++DA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+D
Sbjct: 1   MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60

Query: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120
           KEIY+KLE+DYGET+LYTPKFDLQTA LWLSPVLVAGAA GVWAY+KHKQ++NVHIMALN
Sbjct: 61  KEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRSWRRQ 158
           LVRGVPLTPKEKQTMLDLL+PPP QRT SSWWRSWRRQ
Sbjct: 121 LVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ 158

[Close]

BLAST of IVF0017932 vs. NCBI nr
Match: XP_022953979.1 (cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata] >XP_022953980.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata] >XP_022953981.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata] >XP_022953983.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata] >XP_022953984.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata] >XP_022992421.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein isoform X1 [Cucurbita maxima] >XP_022992422.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein isoform X1 [Cucurbita maxima] >XP_022992423.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein isoform X1 [Cucurbita maxima] >XP_022992424.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein isoform X1 [Cucurbita maxima] >XP_022992425.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein isoform X1 [Cucurbita maxima] >XP_023549463.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita pepo subsp. pepo] >XP_023549464.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita pepo subsp. pepo] >XP_023549465.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita pepo subsp. pepo] >XP_023549466.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita pepo subsp. pepo] >KAG7014070.1 Cytochrome c-type biogenesis CcmH-like mitochondrial protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 286 bits (732), Expect = 7.28e-97
Identity = 141/158 (89.24%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60
           ME D DA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+D
Sbjct: 1   MESDADAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60

Query: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120
           KEI+KKLENDYGETILYTPKFDLQTA LWLSPVLVAGAA GVWAYSK+KQ+SNVHIMALN
Sbjct: 61  KEIFKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAAGVWAYSKYKQKSNVHIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRSWRRQ 158
           +VRGVPLTP+EKQTMLDLLSPPP QR  S WWR WR Q
Sbjct: 121 IVRGVPLTPREKQTMLDLLSPPPPQRAASLWWRRWRSQ 158

[Close]

BLAST of IVF0017932 vs. TAIR 10
Match: AT1G15220.1 (cytochrome c biogenesis protein family )

HSP 1 Score: 205.3 bits (521), Expect = 3.6e-53
Identity = 103/156 (66.03%), Postives = 124/156 (79.49%), Query Frame = 0


Query: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60
           ME  ++  KK Q+++ARARNISHNVRC ECGSQSIEDSQADIAILLR+LIR+EI +GKTD
Sbjct: 1   MEKTDEERKKAQMLDARARNISHNVRCTECGSQSIEDSQADIAILLRQLIRNEIGAGKTD 60

Query: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120
           KEIY KLE+++GET+LY PKFDLQTA LWL+PV++AG       Y KH+ R NV IMALN
Sbjct: 61  KEIYSKLEDEFGETVLYAPKFDLQTAALWLTPVIIAGGTAAGIVYQKHRLRKNVDIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLSPP-PSQRTPSSWWRSW 156
           L+RGVPLTPKE+ T+LD+L PP P  +   S  R W
Sbjct: 121 LIRGVPLTPKERVTILDVLIPPSPPPQGVVSRLRRW 156

[Close]

BLAST of IVF0017932 vs. TAIR 10
Match: AT1G15220.2 (cytochrome c biogenesis protein family )

HSP 1 Score: 205.3 bits (521), Expect = 3.6e-53
Identity = 103/156 (66.03%), Postives = 124/156 (79.49%), Query Frame = 0


Query: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60
           ME  ++  KK Q+++ARARNISHNVRC ECGSQSIEDSQADIAILLR+LIR+EI +GKTD
Sbjct: 1   MEKTDEERKKAQMLDARARNISHNVRCTECGSQSIEDSQADIAILLRQLIRNEIGAGKTD 60

Query: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120
           KEIY KLE+++GET+LY PKFDLQTA LWL+PV++AG       Y KH+ R NV IMALN
Sbjct: 61  KEIYSKLEDEFGETVLYAPKFDLQTAALWLTPVIIAGGTAAGIVYQKHRLRKNVDIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLSPP-PSQRTPSSWWRSW 156
           L+RGVPLTPKE+ T+LD+L PP P  +   S  R W
Sbjct: 121 LIRGVPLTPKERVTILDVLIPPSPPPQGVVSRLRRW 156

The following BLAST results are available for this feature:

BLAST of IVF0017932 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8AFK5	2.9e-63	77.70	Cytochrome c-type biogenesis CcmH-like mitochondrial protein OS=Oryza sativa sub...	[more]
Q6K7S7	2.9e-63	77.70	Cytochrome c-type biogenesis CcmH-like mitochondrial protein OS=Oryza sativa sub...	[more]
Q9XI46	5.1e-52	66.03	Cytochrome c-type biogenesis CcmH-like mitochondrial protein OS=Arabidopsis thal...	[more]
P45405	1.2e-16	34.53	Cytochrome c-type biogenesis protein CcmH OS=Bradyrhizobium diazoefficiens (stra...	[more]
P45406	2.5e-14	34.75	Cytochrome c-type biogenesis protein CcmH OS=Rhizobium meliloti (strain 1021) OX...	[more]

BLAST of IVF0017932 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DZT6	1.5e-83	100.00	Cytochrome c-type biogenesis protein OS=Cucumis melo OX=3656 GN=LOC103493367 PE=...	[more]
A0A5A7TY95	1.5e-83	100.00	Cytochrome c-type biogenesis protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0L351	1.4e-81	96.84	Cytochrome c-type biogenesis protein OS=Cucumis sativus OX=3659 GN=Csa_3G099640 ...	[more]
A0A6J1DHL6	5.3e-76	89.87	Cytochrome c-type biogenesis protein OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1JTI4	4.9e-74	89.24	Cytochrome c-type biogenesis protein OS=Cucurbita maxima OX=3661 GN=LOC111488733...	[more]

BLAST of IVF0017932 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452301.1	2.28e-109	100.00	PREDICTED: cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis...	[more]
XP_004149299.1	8.92e-107	96.84	cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis sativus] >...	[more]
XP_038904619.1	7.13e-101	96.08	cytochrome c-type biogenesis CcmH-like mitochondrial protein [Benincasa hispida]...	[more]
XP_022152937.1	1.86e-99	89.87	cytochrome c-type biogenesis CcmH-like mitochondrial protein [Momordica charanti...	[more]
XP_022953979.1	7.28e-97	89.24	cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata...	[more]

BLAST of IVF0017932 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15220.1	3.6e-53	66.03	cytochrome c biogenesis protein family	[more]
AT1G15220.2	3.6e-53	66.03	cytochrome c biogenesis protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005616	CcmH/CycL/Ccl2/NrfF family	PFAM	PF03918	CcmH	coord: 10..137 e-value: 1.7E-29 score: 102.0
IPR038297	CcmH/CycL/Ccl2/NrfF domain superfamily	GENE3D	1.10.8.640	Cytochrome C biogenesis protein	coord: 1..82 e-value: 6.8E-21 score: 76.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..158
None	No IPR available	PANTHER	PTHR47601	FAMILY NOT NAMED	coord: 1..156
None	No IPR available	CDD	cd16378	CcmH_N	coord: 14..79 e-value: 8.15114E-27 score: 94.1326

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0017932.1	IVF0017932.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0032991	protein-containing complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016491	oxidoreductase activity