IVF0017915 (gene) Melon (IVF77) v1

Overview
NameIVF0017915
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationtig00000430: 477166 .. 477795 (+)
RNA-Seq ExpressionIVF0017915
SyntenyIVF0017915
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGGACTCCCCACCAATAAAACTGATGAACGTCACTCAGTAATCTTCTTGCAATTTCAGATGCCTTAATTAAAAAATAAGACGCCAGCGCACTGCACTTTTCTATCCTGATTCTTGCCCGTAAAGGTTTCCAGTTTCTACTTTCCTTTTTTGTGCCAGAAGGCATCATTTTCATTGGTTAATTACAATGTATTCAAATTTACCTGACTTGGAAAGAATAATGTGCAAGTTGACTCCTGCTATGCTATCAATTAATTTGATACATAGCATCAGTTTGGAGACGGAAAAAAAAAAGGAGAGAGAGATCCGCGAAAGGATTCCATCTGCCAATATTCAGATTCTTTTCATTACGCATCAGCATGTGATGCGCAACTATACATCTTGATGGGAAACATCTTATCAATATTTTTGTTACAGAAATAACATGCTATAAGAAAAATTATAGTTGTACCGTACTCACAGTGCAGAAGTTCAAGCTCTCCATGGTGCCTGCATTCTACCATAACGTTTTCGTTGTCTTCCCCTCAAACAGGAAAACTGCCGACTGCCGACTGCCGAGCCTCGTTACCTTTGGCGCAGTCACCAAATACAAAACTCAATTTTCCATTCAAATCCCAACAAAAATAA

mRNA sequence

ATGTCTGGACTCCCCACCAATAAAACTGATGAACTTTCTACTTTCCTTTTTTGTGCCAGAAGGCATCATTTTCATTGGTTAATTACAATGTATTCAAATTTACCTGACTTGGAAAGAATAATGTGCAAGTTGACTCCTGCTATGCTATCAATTAATTTGATACATAGCATCAGTTTGGAGACGGAAAAAAAAAAGGAGAGAGAGATCCGCGAAAGGATTCCATCTGCCAATATTCAGATTCTTTTCATTACGCATCAGCATTGCAGAAGTTCAAGCTCTCCATGGTGCCTGCATTCTACCATAACGTTTTCGTTGTCTTCCCCTCAAACAGGAAAACTGCCGACTGCCGACTGCCGAGCCTCGTTACCTTTGGCGCAGTCACCAAATACAAAACTCAATTTTCCATTCAAATCCCAACAAAAATAA

Coding sequence (CDS)

ATGTCTGGACTCCCCACCAATAAAACTGATGAACTTTCTACTTTCCTTTTTTGTGCCAGAAGGCATCATTTTCATTGGTTAATTACAATGTATTCAAATTTACCTGACTTGGAAAGAATAATGTGCAAGTTGACTCCTGCTATGCTATCAATTAATTTGATACATAGCATCAGTTTGGAGACGGAAAAAAAAAAGGAGAGAGAGATCCGCGAAAGGATTCCATCTGCCAATATTCAGATTCTTTTCATTACGCATCAGCATTGCAGAAGTTCAAGCTCTCCATGGTGCCTGCATTCTACCATAACGTTTTCGTTGTCTTCCCCTCAAACAGGAAAACTGCCGACTGCCGACTGCCGAGCCTCGTTACCTTTGGCGCAGTCACCAAATACAAAACTCAATTTTCCATTCAAATCCCAACAAAAATAA

Protein sequence

MSGLPTNKTDELSTFLFCARRHHFHWLITMYSNLPDLERIMCKLTPAMLSINLIHSISLETEKKKEREIRERIPSANIQILFITHQHCRSSSSPWCLHSTITFSLSSPQTGKLPTADCRASLPLAQSPNTKLNFPFKSQQK
Homology
[Close]
BLAST of IVF0017915 vs. ExPASy TrEMBL
Match: A0A0A0L5E0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G167880 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 7.1e-32
Identity = 89/148 (60.14%), Postives = 96/148 (64.86%), Query Frame = 0 

Query: 1   MSGLPTNKTDELSTFLFCARRHHFHWLITMYSNLPDLERIMCKLTPAMLSINLIHSISLE 60
           M GL TNKTDE  T     +RHHFH L+TMY+NLP+LERIMCKLTPAMLSI+LIHSISLE
Sbjct: 1   MPGLWTNKTDERVT-----QRHHFHRLVTMYANLPELERIMCKLTPAMLSIHLIHSISLE 60

Query: 61  TEKKK-EREIRERIPSANIQILFITHQH-------------------------------- 109
           TEKK+ EREIR+RIPSANIQILFITHQH                                
Sbjct: 61  TEKKRGEREIRKRIPSANIQILFITHQHVMRNKTMQLDGKHLIDISVTEITCYKNNYSVP 120

[Close]
BLAST of IVF0017915 vs. NCBI nr
Match: KGN57175.1 (hypothetical protein Csa_011255 [Cucumis sativus])

HSP 1 Score: 148 bits (373), Expect = 1.05e-42
Identity = 89/148 (60.14%), Postives = 96/148 (64.86%), Query Frame = 0 

Query: 1   MSGLPTNKTDELSTFLFCARRHHFHWLITMYSNLPDLERIMCKLTPAMLSINLIHSISLE 60
           M GL TNKTDE  T     +RHHFH L+TMY+NLP+LERIMCKLTPAMLSI+LIHSISLE
Sbjct: 1   MPGLWTNKTDERVT-----QRHHFHRLVTMYANLPELERIMCKLTPAMLSIHLIHSISLE 60

Query: 61  TEKKK-EREIRERIPSANIQILFITHQH-------------------------------- 108
           TEKK+ EREIR+RIPSANIQILFITHQH                                
Sbjct: 61  TEKKRGEREIRKRIPSANIQILFITHQHVMRNKTMQLDGKHLIDISVTEITCYKNNYSVP 120

The following BLAST results are available for this feature:
BLAST of IVF0017915 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0017915 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5E07.1e-3260.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G167880 PE=4 SV=1[more]
BLAST of IVF0017915 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57175.11.05e-4260.14hypothetical protein Csa_011255 [Cucumis sativus][more]
BLAST of IVF0017915 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0017915.1IVF0017915.1mRNA