IVF0017910 (gene) Melon (IVF77) v1

Overview
NameIVF0017910
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr11: 3636594 .. 3637033 (+)
RNA-Seq ExpressionIVF0017910
SyntenyIVF0017910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACAGTGTATCGGGAACGACGTCGGGAATAAGGGTTTTCTCGACACACTATTGCGCGTCGAAAAAACCTTTTATGAGCGTCGAGAATACCCTTATTTCCGACGCCATAAAGGGGATCTCCCACGTTTTCGTGCTGCGTCGGGAGATCTCCTTTATAAACGTTTCAGTTCTGTATTATACAGAACTGAAACGAAAAGGAAAGGAGAAGAGAGAAACGAAGATTCGTCGCCGTCCGTAGCTCGCCGTCATCTGTTCCGTCGTCATTGTCGTCCCTCACCGCCATCTGCCATCTTAGGTAAGTTTAAATATAAAGTTTGTTTAGTTTAAATATAAGTTTTAGGGTTTTTTTTTTAAGAAAATTGTTTTGGAATAGATTTTTATTTGTTACATGTATTTTTGTATAGAATGTGTGTAATTTGTGGTAGAATTGAAATTTGA

mRNA sequence

ATGCACAGTGTATCGGGAACGACGTCGGGAATAAGGGTTTTCTCGACACACTATTGCGCGTCGAAAAAACCTTTTATGAGCGTCGAGAATACCCTTATTTCCGACGCCATAAAGGGGATCTCCCACGTTTTCGTGCTGCGTCGGGAGATCTCCTTTATAAACGTTTCAGTTCTGTATTATACAGAACTGAAACGAAAAGGAAAGGAGAAGAGAGAAACGAAGATTCGTCGCCGTCCAATGTGTGTAATTTGTGGTAGAATTGAAATTTGA

Coding sequence (CDS)

ATGCACAGTGTATCGGGAACGACGTCGGGAATAAGGGTTTTCTCGACACACTATTGCGCGTCGAAAAAACCTTTTATGAGCGTCGAGAATACCCTTATTTCCGACGCCATAAAGGGGATCTCCCACGTTTTCGTGCTGCGTCGGGAGATCTCCTTTATAAACGTTTCAGTTCTGTATTATACAGAACTGAAACGAAAAGGAAAGGAGAAGAGAGAAACGAAGATTCGTCGCCGTCCAATGTGTGTAATTTGTGGTAGAATTGAAATTTGA

Protein sequence

MHSVSGTTSGIRVFSTHYCASKKPFMSVENTLISDAIKGISHVFVLRREISFINVSVLYYTELKRKGKEKRETKIRRRPMCVICGRIEI
Homology
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BLAST of IVF0017910 vs. NCBI nr
Match: KAA0050659.1 (hypothetical protein E6C27_scaffold673G001380 [Cucumis melo var. makuwa])

HSP 1 Score: 48.5 bits (114), Expect = 2.56e-04
Identity = 28/47 (59.57%), Postives = 33/47 (70.21%), Query Frame = 0 

Query: 26 MSVENTLISDAIKGISHVFVLRREISFINVSVLYYTELKRKGKEKRE 72
          MSV NT+I +A+       V  REI FINVSVL+YTELK KGK +RE
Sbjct: 1  MSVGNTIIPEAV-------VWHREILFINVSVLFYTELKTKGKRRRE 40

The following BLAST results are available for this feature:
BLAST of IVF0017910 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0017910 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0017910 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0050659.12.56e-0459.57hypothetical protein E6C27_scaffold673G001380 [Cucumis melo var. makuwa][more]
BLAST of IVF0017910 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0017910.2IVF0017910.2mRNA