IVF0017861 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGTCGCATCTTGCAACGAAGAGCCTCCTTAACAAACCCTTTTACTATTACGACGAACTTGCATATGTGTTTGAGAGGGATAGAGCGACGGGTCGCTTTATAGAGACCTTCGTCGACATCGGGTCTAATGAGCATGCCGAGTATGAGGGGTTTGACATGTCGGATGGGAACGATATGAAGTTTCCATCCATGTACAGCCAAGGGATTGACATGTCCCAGGATGATGTACGCGCATCACGACCCGCTCACGTGTCAGATGGTAAACCCTGATCGAGCAGATCTAAGAGAAAGAGGGAAAGCCAGTGGGAGGGTAAGATTGACATGATACATATGGTCCTGGAGTGTATGAATGACCAACTCAAGACCATAGTCGAGTGA ATGCAGTCGCATCTTGCAACGAAGAGCCTCCTTAACAAACCCTTTTACTATTACGACGAACTTGCATATGTGTTTGAGAGGGATAGAGCGACGGGTCGCTTTATAGAGACCTTCGTCGACATCGGGTCTAATGAGCATGCCGAGTATGAGGGGTTTGACATGTCGGATGGGAACGATATGAAGTTTCCATCCATGTACAGCCAAGGGATTGACATGTCCCAGGATGATGTACGCGCATCACGACCCGCTCACAGAAAGAGGGAAAGCCAGTGGGAGGGTAAGATTGACATGATACATATGGTCCTGGAGTGTATGAATGACCAACTCAAGACCATAGTCGAGTGA ATGCAGTCGCATCTTGCAACGAAGAGCCTCCTTAACAAACCCTTTTACTATTACGACGAACTTGCATATGTGTTTGAGAGGGATAGAGCGACGGGTCGCTTTATAGAGACCTTCGTCGACATCGGGTCTAATGAGCATGCCGAGTATGAGGGGTTTGACATGTCGGATGGGAACGATATGAAGTTTCCATCCATGTACAGCCAAGGGATTGACATGTCCCAGGATGATGTACGCGCATCACGACCCGCTCACAGAAAGAGGGAAAGCCAGTGGGAGGGTAAGATTGACATGATACATATGGTCCTGGAGTGTATGAATGACCAACTCAAGACCATAGTCGAGTGA MQSHLATKSLLNKPFYYYDELAYVFERDRATGRFIETFVDIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHRKRESQWEGKIDMIHMVLECMNDQLKTIVE Homology
BLAST of IVF0017861 vs. ExPASy TrEMBL
Match: A0A5D3DXB2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00660 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.2e-39 Identity = 91/126 (72.22%), Postives = 97/126 (76.98%), Query Frame = 0
BLAST of IVF0017861 vs. ExPASy TrEMBL
Match: A0A5D3BP98 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00510 PE=3 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 3.7e-39 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of IVF0017861 vs. ExPASy TrEMBL
Match: A0A5A7TT49 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001460 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 6.3e-39 Identity = 85/104 (81.73%), Postives = 88/104 (84.62%), Query Frame = 0
BLAST of IVF0017861 vs. ExPASy TrEMBL
Match: A0A5D3BQI7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00550 PE=3 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 4.1e-38 Identity = 86/126 (68.25%), Postives = 100/126 (79.37%), Query Frame = 0
BLAST of IVF0017861 vs. ExPASy TrEMBL
Match: A0A5A7U9D5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00780 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 3.6e-34 Identity = 82/126 (65.08%), Postives = 94/126 (74.60%), Query Frame = 0
BLAST of IVF0017861 vs. NCBI nr
Match: KAA0055946.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK28152.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 170 bits (430), Expect = 5.72e-51 Identity = 91/126 (72.22%), Postives = 97/126 (76.98%), Query Frame = 0
BLAST of IVF0017861 vs. NCBI nr
Match: TYK00096.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 168 bits (425), Expect = 3.84e-49 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of IVF0017861 vs. NCBI nr
Match: KAA0046602.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 168 bits (425), Expect = 4.62e-49 Identity = 85/104 (81.73%), Postives = 88/104 (84.62%), Query Frame = 0
BLAST of IVF0017861 vs. NCBI nr
Match: KAA0033884.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK01268.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 166 bits (419), Expect = 2.19e-47 Identity = 86/126 (68.25%), Postives = 100/126 (79.37%), Query Frame = 0
BLAST of IVF0017861 vs. NCBI nr
Match: KAA0050806.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK08539.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 153 bits (386), Expect = 1.83e-44 Identity = 82/126 (65.08%), Postives = 94/126 (74.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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