IVF0017856 (gene) Melon (IVF77) v1

Overview


Name	IVF0017856
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	vesicle transport protein GOT1
Location	chr07: 15258315 .. 15261115 (+)
RNA-Seq Expression	IVF0017856
Synteny	IVF0017856

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTTGTACGAGAGGAATCGCCCTTTGTAAAGGTATACTCAGACAAAAAAATTTGAAAAAAAAAATATAAATGGTTTTGCCATAAATCAAAATATTATTGGGATTTGCTATTTTTCTATTTGCAATCCAATATTTTGCTATTTTAACAGAAATAACAAATTGAAACCAATGACATATCTCTAGAGATTGTTGGAATAATATAATATTTTTTTGATTTAGTTAAGAACTAGCGAGTGTATTTACATATATGATATATTGTTTGTTTTTTTTATTTCAACAAATTCACTATATTTGTAGATGACAATTGTCTTCCATGGAAGGGTAAATTCGAAAAAAAAGGGAAAAATTATTCTTTCAACTAGTCTTGCCATAAATCAAAATAATTCGTGCTATCGGGAACTCTCTTAAAATATTTCTAAACATTCAATTTGGGAAAGTTGCCGAAAGTAGTCTGTCTCTCGAAACTCCACCAAATCACTATGAAACAAACTCTTTCCAATTTCAATTTTGTTTACGTAATTAGGATCTATCGATCCGAGCTCGGCAAGGCCTTTGAGACTCTCCACCTACCCTTCGCCTAATCGAGACTCACTTCTGCGTCGACGTTGCTACTACGCCCGAACAACTCACTCAACTCTACACAATTCCATCTTCGAGCAGTTCGATTGTGATAAGAGCGGTACTGTGAATGCAGAAGAGTATTGTATGGAGACGAAGAACATCTTGCTCGCTGTCGCTGATGGATTAGGCTTCTCTTTGATTCAGATGGCGAACCCTAGGAATTTATTCATCGTACAGAGATGATAAAATCAGTTATGTATAATTCATTAATAAAAAAATTTACATTTATTTTCAGTTATTCAGTTATTTTATTCCCATGTGTGGTTGGTCATTGATTCGGCTGCATATTTTGTTGGGTTTTGTACGTCTACTCAGCAATGCTCATGCATAAAAGAGGAAGCTTTGTTATTTTTTCTAATCATTTTCTTTCTTATATGAATTGTTTTTGCAATGGCATTAATGATGAATTTGCAAATGAGCAGAGATTGGGCTAGGACTATCAGGATTTGGGGTATTTTTCGCGTTCCTTGAAATTTTCTTCTTTTTTGACAAGGGATTACTTGCTATGGGAAATTTATGTGTAGAATTTATATTTTTCTCAACTCAAGTAAAAAGTTCTGTAAATCTTGTCTCATTCTAATGTAACCTCTTAACACCACATCTCTTCTCTGGTTCACCGAATCAAATCCTGTTCTTCTCAGGAGTAGCTCTCACCATTGGACTCAAGTCAACCATGCAATTCTTTATGAAACGTCAAAATTTACGGTGTACGTTTTATCATTTATGCAGGGAACAATTTCTTTTGGTTTAGGGTCCTTTATGTTATCATAGGATGGCCAATCTTTGGCATGATATTGGAAGCATATGGTTTTGTTGTCCTTTTCAGGTTTGTTGGATATAGATGGTCATTTGCCAGAGTTTGGATTTGTATGTATATCTTTTTACTCTTTCGCCATGCTGAATGTTGATAAATTATGTTGTGCAGTGGCTTCTTTACCTTTCTGTTGATGTTCTATTTATTTAAATTAGTTCATAACATGCAAGATGTATGTAAAATTTATAGTTTATGAAAGTTACGAAAATTTAAGAGCAAACTAGGAAAACATTCTTTTCCATAACCCCATTTATAAAACAGGAATAAGAACTTTGAATTCTTTTTTTTTTTTTTTTTTTTTATAAATGATTTGTACTAATGGTAATTAACTATATAAATTTATTGGGTAGTGAGAATAGGAGAGACATTACAAATTTTGGATTCACGCTACATCTAAGTGGTAGTTTCATTGCATAATTATATTTATTACTGTTAGTTTTTTTTTTTAAATAAATGAGAAAGTCAAAGCTATGTGACATTTCGATAAGGATATGTGTGTAATTTGATGAGTGATGTTGGAGATGACTCTTAATATATATGTAGAAATAGAAAATGGAGATTATAATTTGTGAAGGTCGGGATGAGAAATAAAAAGGTAGACGGAATGGAAGAGTAGAATAAGTTGAAATTGGAGTTTGACGCATGACTAGTTGTCAGAAGAAATGATCTCAGGGTATAGTTGAGTTTTGCTTTGGTTGCCCCTACCATGTGAAATTTGGAGTTTGTTCAATTTTAATTGCTTTATTTTTAATTTTTAATTTTAATTTTTATACTCCTAATAAATCTTAAATCTATTCTAATACTAGTTTATTGTGTTGATTTTTTAAACGTTTATCTATAACATTTCTACAATAAATTTTGAAAACATATTCACATACTTTATTTTATTGATTATATGCATTCGATTTAATTCTTTATTTTTATTTTAACATATATTTTAAAATATATGTATGCGTATAGTGTGCTTAATAACCAGACAGTACAGAATGTGGATACTATATTATGAAGTTCATTCAAGACATGGTAAGGCAAAACAACGTCACAATTAGAGATGAGTATGCATTTTCTTGCACCATTTTTTATAGCTACACTACAAGAAATCTGACCTTTAATGTCAGTTTAAAACCGACATTAAAGGGCTTTAATGTCACTTGGCAACCAACATTTTTGCGAGCGTTATTAAAGGCCTTTAATGTCGGTTGGGCTTTAATGTCGGTTTAAAAACGACATTAAAGAGGCTAATAATGTCAGTTTAAAACCGACATTAAAGGCTTGTTTTTATCCATTTTTAGAAATTTATATTTATTTAATTGTTGTATTATTGTCCATTTTTTATAAACCAACATTGAATCCATATAGATAA

mRNA sequence

ATGTATTTGTACGAGAGGAATCAGATTGGGCTAGGACTATCAGGATTTGGGGTATTTTTCGCGTTCCTTGAAATTTTCTTCTTTTTTGACAAGGGATTACTTGCTATGGGAAATTTATTAGCTCTCACCATTGGACTCAAGTCAACCATGCAATTCTTTATGAAACGTCAAAATTTACGGTGTACGGTCCTTTATGTTATCATAGGATGGCCAATCTTTGGCATGATATTGGAAGCATATGGTTTTGTTGTCCTTTTCAGTTTAAAACCGACATTAAAGGCTTGTTTTTATCCATTTTTAGAAATTTATATTTATTTAATTGTTGTATTATTGTCCATTTTTTATAAACCAACATTGAATCCATATAGATAA

Coding sequence (CDS)

ATGTATTTGTACGAGAGGAATCAGATTGGGCTAGGACTATCAGGATTTGGGGTATTTTTCGCGTTCCTTGAAATTTTCTTCTTTTTTGACAAGGGATTACTTGCTATGGGAAATTTATTAGCTCTCACCATTGGACTCAAGTCAACCATGCAATTCTTTATGAAACGTCAAAATTTACGGTGTACGGTCCTTTATGTTATCATAGGATGGCCAATCTTTGGCATGATATTGGAAGCATATGGTTTTGTTGTCCTTTTCAGTTTAAAACCGACATTAAAGGCTTGTTTTTATCCATTTTTAGAAATTTATATTTATTTAATTGTTGTATTATTGTCCATTTTTTATAAACCAACATTGAATCCATATAGATAA

Protein sequence

MYLYERNQIGLGLSGFGVFFAFLEIFFFFDKGLLAMGNLLALTIGLKSTMQFFMKRQNLRCTVLYVIIGWPIFGMILEAYGFVVLFSLKPTLKACFYPFLEIYIYLIVVLLSIFYKPTLNPYR

Homology

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BLAST of IVF0017856 vs. ExPASy Swiss-Prot
Match: Q6NMM1 (Vesicle transport protein GOT1 OS=Arabidopsis thaliana OX=3702 GN=GOT1 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.2e-20
Identity = 59/121 (48.76%), Postives = 80/121 (66.12%), Query Frame = 0


Query: 8   QIGLGLSGFGVFFAFLEIFFFFDKGLLAMGNLL-----ALTIGLKSTMQFFMKRQNLRCT 67
           +IGLGL+GFGVFF FL + F FDKGL+AMGN+L      LTIG+   +QFF KRQN + T
Sbjct: 11  KIGLGLTGFGVFFTFLGVIFVFDKGLIAMGNILFLAGVTLTIGINPAIQFFTKRQNFKGT 70

Query: 68  V------LYVIIGWPIFGMILEAYGFVVLFSLKPTLKACFYPFLEIYIYLIVVLLSIFYK 118
           +      L V+ GWPIFG++LE+YGF+VLFS        F+P L +++  I +L  +  +
Sbjct: 71  ISFGLGFLLVVFGWPIFGLLLESYGFLVLFS-------GFWPTLAVFLQRIPLLGWLLQQ 124

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BLAST of IVF0017856 vs. ExPASy Swiss-Prot
Match: Q9CR60 (Vesicle transport protein GOT1B OS=Mus musculus OX=10090 GN=Golt1b PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 8.6e-15
Identity = 53/131 (40.46%), Postives = 75/131 (57.25%), Query Frame = 0


Query: 3   LYERNQIGLGLSGFGVFFAFLEIFFFFDKGLLAMGNL-----LALTIGLKSTMQFFMKRQ 62
           L +  +IG+GL+GFGVFF F  +  FFDK LLA+GN+     LA  IGL+ T +FF +R 
Sbjct: 4   LTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQRH 63

Query: 63  NLRCT------VLYVIIGWPIFGMILEAYGFVVLFSLKPTLKACFYPFLEIYIYLIVVLL 122
            ++ T      V  V+IGWP+ GMI E YGF +LF         F+P +  +I  + VL 
Sbjct: 64  KVKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLF-------RGFFPVVVGFIRRVPVLG 123

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BLAST of IVF0017856 vs. ExPASy Swiss-Prot
Match: Q2YDE3 (Vesicle transport protein GOT1B OS=Bos taurus OX=9913 GN=GOLT1B PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.5e-14
Identity = 52/131 (39.69%), Postives = 75/131 (57.25%), Query Frame = 0


Query: 3   LYERNQIGLGLSGFGVFFAFLEIFFFFDKGLLAMGNL-----LALTIGLKSTMQFFMKRQ 62
           L +  +IG+GL+GFGVFF F  +  FFDK LLA+GN+     LA  IGL+ T +FF ++ 
Sbjct: 4   LTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQKH 63

Query: 63  NLRCT------VLYVIIGWPIFGMILEAYGFVVLFSLKPTLKACFYPFLEIYIYLIVVLL 122
            ++ T      V  V+IGWP+ GMI E YGF +LF         F+P +  +I  + VL 
Sbjct: 64  KMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLF-------RGFFPVVVGFIRRVPVLG 123

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BLAST of IVF0017856 vs. ExPASy Swiss-Prot
Match: Q9Y3E0 (Vesicle transport protein GOT1B OS=Homo sapiens OX=9606 GN=GOLT1B PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.5e-14
Identity = 52/131 (39.69%), Postives = 75/131 (57.25%), Query Frame = 0


Query: 3   LYERNQIGLGLSGFGVFFAFLEIFFFFDKGLLAMGNL-----LALTIGLKSTMQFFMKRQ 62
           L +  +IG+GL+GFGVFF F  +  FFDK LLA+GN+     LA  IGL+ T +FF ++ 
Sbjct: 4   LTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQKH 63

Query: 63  NLRCT------VLYVIIGWPIFGMILEAYGFVVLFSLKPTLKACFYPFLEIYIYLIVVLL 122
            ++ T      V  V+IGWP+ GMI E YGF +LF         F+P +  +I  + VL 
Sbjct: 64  KMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLF-------RGFFPVVVGFIRRVPVLG 123

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BLAST of IVF0017856 vs. ExPASy Swiss-Prot
Match: Q9DCQ3 (Vesicle transport protein GOT1A OS=Mus musculus OX=10090 GN=Golt1a PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 9.6e-14
Identity = 45/93 (48.39%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 5  ERNQIGLGLSGFGVFFAFLEIFFFFDKGLLAMGNLLALT-----IGLKSTMQFFMKRQNL 64
          E  +IG+G++GFGVFF    I  +FD  LLA GNLL LT     IGL+ T  FF +R  L
Sbjct: 6  EWQKIGVGITGFGVFFILFGILLYFDSVLLAFGNLLFLTGLSLIIGLRRTFAFFFQRHKL 65

Query: 65 RCT------VLYVIIGWPIFGMILEAYGFVVLF 87
          + T      V  V++ WP+ GM+LEAYGF+ LF
Sbjct: 66 KGTSFFLGGVAIVLLRWPLLGMLLEAYGFISLF 98

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BLAST of IVF0017856 vs. ExPASy TrEMBL
Match: A0A1S3BYQ5 (vesicle transport protein GOT1B-like OS=Cucumis melo OX=3656 GN=LOC103494525 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 5.1e-26
Identity = 77/129 (59.69%), Postives = 92/129 (71.32%), Query Frame = 0


Query: 5   ERNQIGLGLSGFGVFFAFLEIFFFFDKGLLAMGNLL-----ALTIGLKSTMQFFMKRQNL 64
           +R +IGLGL+GFGVFF+FL I FFFDKGLLAMGN+L      LTIGLKSTMQFFMKRQN 
Sbjct: 8   DRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQNF 67

Query: 65  RCTV------LYVIIGWPIFGMILEAYGFVVLFSLKPTLKACFYPFLEIYIYLIVVLLSI 123
           + TV       +VIIGWPIFGMILEAYGFVVLFS        F+P L +++  I VL  +
Sbjct: 68  KGTVSFGLGFFFVIIGWPIFGMILEAYGFVVLFS-------GFWPTLAVFLQKIPVLGWL 127

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BLAST of IVF0017856 vs. ExPASy TrEMBL
Match: A0A5D3CYI2 (Vesicle transport protein GOT1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001140 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 6.6e-26
Identity = 77/124 (62.10%), Postives = 90/124 (72.58%), Query Frame = 0


Query: 5   ERNQIGLGLSGFGVFFAFLEIFFFFDKGLLAMGNLL-----ALTIGLKSTMQFFMKRQNL 64
           +R +IGLGL+GFGVFF+FL I FFFDKGLLAMGN+L      LTIGLKSTMQFFMKRQN 
Sbjct: 8   DRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQNF 67

Query: 65  RCTV------LYVIIGWPIFGMILEAYGFVVLFSLKPTLKACFYPFLEIYIYLIVVLLSI 118
           + TV       +VIIGWPIFGMILEAYGFVVLFS        F+P L +++  I VL  +
Sbjct: 68  KGTVSFGLGFFFVIIGWPIFGMILEAYGFVVLFS-------GFWPTLAVFLQKIPVLGWL 124

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BLAST of IVF0017856 vs. ExPASy TrEMBL
Match: A0A0A0KU00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016390 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 6.6e-26
Identity = 76/129 (58.91%), Postives = 92/129 (71.32%), Query Frame = 0


Query: 5   ERNQIGLGLSGFGVFFAFLEIFFFFDKGLLAMGNLL-----ALTIGLKSTMQFFMKRQNL 64
           +R +IGLGL+GFGVFF+FL I FFFDKGLLAMGN+L      LTIGLKSTMQFFMKRQN 
Sbjct: 8   DRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQNF 67

Query: 65  RCTV------LYVIIGWPIFGMILEAYGFVVLFSLKPTLKACFYPFLEIYIYLIVVLLSI 123
           + T+       +VIIGWPIFGMILEAYGFVVLFS        F+P L +++  I VL  +
Sbjct: 68  KGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFS-------GFWPTLAVFLQKIPVLGWL 127

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BLAST of IVF0017856 vs. ExPASy TrEMBL
Match: A0A5A7TR70 (Vesicle transport protein GOT1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003670 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 8.7e-26
Identity = 76/124 (61.29%), Postives = 90/124 (72.58%), Query Frame = 0


Query: 5   ERNQIGLGLSGFGVFFAFLEIFFFFDKGLLAMGNLL-----ALTIGLKSTMQFFMKRQNL 64
           +R +IGLGL+GFGVFF+FL I FFFDKGLLAMGN+L      LTIGLKSTMQFFMKRQN 
Sbjct: 8   DRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQNF 67

Query: 65  RCTV------LYVIIGWPIFGMILEAYGFVVLFSLKPTLKACFYPFLEIYIYLIVVLLSI 118
           + T+       +VIIGWPIFGMILEAYGFVVLFS        F+P L +++  I VL  +
Sbjct: 68  KGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFS-------GFWPTLAVFLQKIPVLGWL 124

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BLAST of IVF0017856 vs. ExPASy TrEMBL
Match: A0A061FRI8 (Got1/Sft2-like vescicle transport protein family isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_036309 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.9e-25
Identity = 73/124 (58.87%), Postives = 90/124 (72.58%), Query Frame = 0


Query: 5   ERNQIGLGLSGFGVFFAFLEIFFFFDKGLLAMGNLL-----ALTIGLKSTMQFFMKRQNL 64
           +R +IGLGL+GFG+FF+FL I FFFDKGLLAMGN+L      LTIGLKSTMQFFMKRQN 
Sbjct: 8   DRKKIGLGLTGFGIFFSFLGIIFFFDKGLLAMGNILFISGVTLTIGLKSTMQFFMKRQNF 67

Query: 65  RCTV------LYVIIGWPIFGMILEAYGFVVLFSLKPTLKACFYPFLEIYIYLIVVLLSI 118
           + T+       +V+IGWPIFGMILEAYGFVVLFS        F+P L +++  I +L  +
Sbjct: 68  KGTISFGVGFFFVVIGWPIFGMILEAYGFVVLFS-------GFWPTLAVFMQRIPILGWL 124

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BLAST of IVF0017856 vs. NCBI nr
Match: XP_008453962.1 (PREDICTED: vesicle transport protein GOT1B-like [Cucumis melo] >XP_008453963.1 PREDICTED: vesicle transport protein GOT1B-like [Cucumis melo] >XP_016901587.1 PREDICTED: vesicle transport protein GOT1B-like [Cucumis melo])

HSP 1 Score: 126 bits (317), Expect = 1.54e-34
Identity = 77/129 (59.69%), Postives = 92/129 (71.32%), Query Frame = 0


Query: 5   ERNQIGLGLSGFGVFFAFLEIFFFFDKGLLAMGNLL-----ALTIGLKSTMQFFMKRQNL 64
           +R +IGLGL+GFGVFF+FL I FFFDKGLLAMGN+L      LTIGLKSTMQFFMKRQN 
Sbjct: 8   DRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQNF 67

Query: 65  RCTV------LYVIIGWPIFGMILEAYGFVVLFSLKPTLKACFYPFLEIYIYLIVVLLSI 122
           + TV       +VIIGWPIFGMILEAYGFVVLFS        F+P L +++  I VL  +
Sbjct: 68  KGTVSFGLGFFFVIIGWPIFGMILEAYGFVVLFS-------GFWPTLAVFLQKIPVLGWL 127

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BLAST of IVF0017856 vs. NCBI nr
Match: XP_004152095.1 (vesicle transport protein GOT1 [Cucumis sativus] >XP_031740250.1 vesicle transport protein GOT1 [Cucumis sativus] >KGN53100.1 hypothetical protein Csa_014796 [Cucumis sativus])

HSP 1 Score: 126 bits (316), Expect = 2.19e-34
Identity = 76/129 (58.91%), Postives = 92/129 (71.32%), Query Frame = 0


Query: 5   ERNQIGLGLSGFGVFFAFLEIFFFFDKGLLAMGNLL-----ALTIGLKSTMQFFMKRQNL 64
           +R +IGLGL+GFGVFF+FL I FFFDKGLLAMGN+L      LTIGLKSTMQFFMKRQN 
Sbjct: 8   DRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQNF 67

Query: 65  RCTV------LYVIIGWPIFGMILEAYGFVVLFSLKPTLKACFYPFLEIYIYLIVVLLSI 122
           + T+       +VIIGWPIFGMILEAYGFVVLFS        F+P L +++  I VL  +
Sbjct: 68  KGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFS-------GFWPTLAVFLQKIPVLGWL 127

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BLAST of IVF0017856 vs. NCBI nr
Match: TYK16973.1 (vesicle transport protein GOT1B-like [Cucumis melo var. makuwa])

HSP 1 Score: 125 bits (315), Expect = 2.60e-34
Identity = 77/124 (62.10%), Postives = 90/124 (72.58%), Query Frame = 0


Query: 5   ERNQIGLGLSGFGVFFAFLEIFFFFDKGLLAMGNLL-----ALTIGLKSTMQFFMKRQNL 64
           +R +IGLGL+GFGVFF+FL I FFFDKGLLAMGN+L      LTIGLKSTMQFFMKRQN 
Sbjct: 8   DRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQNF 67

Query: 65  RCTV------LYVIIGWPIFGMILEAYGFVVLFSLKPTLKACFYPFLEIYIYLIVVLLSI 117
           + TV       +VIIGWPIFGMILEAYGFVVLFS        F+P L +++  I VL  +
Sbjct: 68  KGTVSFGLGFFFVIIGWPIFGMILEAYGFVVLFS-------GFWPTLAVFLQKIPVLGWL 124

[Close]

BLAST of IVF0017856 vs. NCBI nr
Match: XP_038879388.1 (vesicle transport protein GOT1-like [Benincasa hispida] >XP_038879468.1 vesicle transport protein GOT1-like [Benincasa hispida] >XP_038879546.1 vesicle transport protein GOT1-like [Benincasa hispida])

HSP 1 Score: 125 bits (315), Expect = 3.10e-34
Identity = 75/129 (58.14%), Postives = 92/129 (71.32%), Query Frame = 0


Query: 5   ERNQIGLGLSGFGVFFAFLEIFFFFDKGLLAMGNLL-----ALTIGLKSTMQFFMKRQNL 64
           +R +IGLGL+GFG+FF+FL I FFFDKGLLAMGN+L      LTIGLKSTMQFFMKRQN 
Sbjct: 8   DRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQNF 67

Query: 65  RCTV------LYVIIGWPIFGMILEAYGFVVLFSLKPTLKACFYPFLEIYIYLIVVLLSI 122
           + T+       +VIIGWPIFGMILEAYGFVVLFS        F+P L +++  I VL  +
Sbjct: 68  KGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFS-------GFWPTLAVFLQKIPVLGWL 127

[Close]

BLAST of IVF0017856 vs. NCBI nr
Match: KAA0044616.1 (vesicle transport protein GOT1B-like [Cucumis melo var. makuwa])

HSP 1 Score: 125 bits (314), Expect = 3.69e-34
Identity = 76/124 (61.29%), Postives = 90/124 (72.58%), Query Frame = 0


Query: 5   ERNQIGLGLSGFGVFFAFLEIFFFFDKGLLAMGNLL-----ALTIGLKSTMQFFMKRQNL 64
           +R +IGLGL+GFGVFF+FL I FFFDKGLLAMGN+L      LTIGLKSTMQFFMKRQN 
Sbjct: 8   DRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQNF 67

Query: 65  RCTV------LYVIIGWPIFGMILEAYGFVVLFSLKPTLKACFYPFLEIYIYLIVVLLSI 117
           + T+       +VIIGWPIFGMILEAYGFVVLFS        F+P L +++  I VL  +
Sbjct: 68  KGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFS-------GFWPTLAVFLQKIPVLGWL 124

[Close]

BLAST of IVF0017856 vs. TAIR 10
Match: AT3G49420.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 113.2 bits (282), Expect = 1.5e-25
Identity = 70/129 (54.26%), Postives = 86/129 (66.67%), Query Frame = 0


Query: 5   ERNQIGLGLSGFGVFFAFLEIFFFFDKGLLAMGNLL-----ALTIGLKSTMQFFMKRQNL 64
           +R +IGLGL+GFGVFF+FL I F FDKGLLAMGN+L     +LTIG KSTMQFFMKRQN 
Sbjct: 8   DRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQFFMKRQNY 67

Query: 65  RCTV------LYVIIGWPIFGMILEAYGFVVLFSLKPTLKACFYPFLEIYIYLIVVLLSI 123
           + T+       +VIIGWPI GM+LE YGF VLFS        F+P L ++   I VL  I
Sbjct: 68  KGTISFGVGFFFVIIGWPILGMMLETYGFFVLFS-------GFWPTLAVFAQKIPVLGWI 127

[Close]

BLAST of IVF0017856 vs. TAIR 10
Match: AT5G01430.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 113.2 bits (282), Expect = 1.5e-25
Identity = 70/129 (54.26%), Postives = 86/129 (66.67%), Query Frame = 0


Query: 5   ERNQIGLGLSGFGVFFAFLEIFFFFDKGLLAMGNLL-----ALTIGLKSTMQFFMKRQNL 64
           +R +IGLGL+GFGVFF+FL I F FDKGLLAMGN+L     +LTIG KSTMQFFMKRQN 
Sbjct: 8   DRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQFFMKRQNY 67

Query: 65  RCTV------LYVIIGWPIFGMILEAYGFVVLFSLKPTLKACFYPFLEIYIYLIVVLLSI 123
           + T+       +VIIGWPI GM+LE YGF VLFS        F+P L ++   I VL  I
Sbjct: 68  KGTISFGVGFFFVIIGWPILGMMLETYGFFVLFS-------GFWPTLAVFAQKIPVLGWI 127

[Close]

BLAST of IVF0017856 vs. TAIR 10
Match: AT5G01430.2 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 113.2 bits (282), Expect = 1.5e-25
Identity = 70/129 (54.26%), Postives = 86/129 (66.67%), Query Frame = 0


Query: 5   ERNQIGLGLSGFGVFFAFLEIFFFFDKGLLAMGNLL-----ALTIGLKSTMQFFMKRQNL 64
           +R +IGLGL+GFGVFF+FL I F FDKGLLAMGN+L     +LTIG KSTMQFFMKRQN 
Sbjct: 8   DRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQFFMKRQNY 67

Query: 65  RCTV------LYVIIGWPIFGMILEAYGFVVLFSLKPTLKACFYPFLEIYIYLIVVLLSI 123
           + T+       +VIIGWPI GM+LE YGF VLFS        F+P L ++   I VL  I
Sbjct: 68  KGTISFGVGFFFVIIGWPILGMMLETYGFFVLFS-------GFWPTLAVFAQKIPVLGWI 127

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BLAST of IVF0017856 vs. TAIR 10
Match: AT3G03180.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 98.6 bits (244), Expect = 3.7e-21
Identity = 59/121 (48.76%), Postives = 80/121 (66.12%), Query Frame = 0


Query: 8   QIGLGLSGFGVFFAFLEIFFFFDKGLLAMGNLL-----ALTIGLKSTMQFFMKRQNLRCT 67
           +IGLGL+GFGVFF FL + F FDKGL+AMGN+L      LTIG+   +QFF KRQN + T
Sbjct: 11  KIGLGLTGFGVFFTFLGVIFVFDKGLIAMGNILFLAGVTLTIGINPAIQFFTKRQNFKGT 70

Query: 68  V------LYVIIGWPIFGMILEAYGFVVLFSLKPTLKACFYPFLEIYIYLIVVLLSIFYK 118
           +      L V+ GWPIFG++LE+YGF+VLFS        F+P L +++  I +L  +  +
Sbjct: 71  ISFGLGFLLVVFGWPIFGLLLESYGFLVLFS-------GFWPTLAVFLQRIPLLGWLLQQ 124

[Close]

BLAST of IVF0017856 vs. TAIR 10
Match: AT1G05785.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-14
Identity = 42/93 (45.16%), Postives = 60/93 (64.52%), Query Frame = 0


Query: 5  ERNQIGLGLSGFGVFFAFLEIFFFFDKGLLAMGNL-----LALTIGLKSTMQFFMKRQNL 64
          E+ ++GLGL GFG+ F FL +  +FD+GLLA+GNL     + L +G +ST + F    NL
Sbjct: 7  EQKKVGLGLIGFGLSFTFLGVILYFDRGLLALGNLFWLIGVGLLLGWQSTWRVFTNVNNL 66

Query: 65 RCTVLYVI------IGWPIFGMILEAYGFVVLF 87
          R T+ +V+      + WPI G+ILE YG +VLF
Sbjct: 67 RGTICFVLGLFLIFVRWPIIGIILEIYGVIVLF 99

The following BLAST results are available for this feature:

BLAST of IVF0017856 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NMM1	5.2e-20	48.76	Vesicle transport protein GOT1 OS=Arabidopsis thaliana OX=3702 GN=GOT1 PE=1 SV=1	[more]
Q9CR60	8.6e-15	40.46	Vesicle transport protein GOT1B OS=Mus musculus OX=10090 GN=Golt1b PE=1 SV=1	[more]
Q2YDE3	1.5e-14	39.69	Vesicle transport protein GOT1B OS=Bos taurus OX=9913 GN=GOLT1B PE=2 SV=1	[more]
Q9Y3E0	1.5e-14	39.69	Vesicle transport protein GOT1B OS=Homo sapiens OX=9606 GN=GOLT1B PE=1 SV=1	[more]
Q9DCQ3	9.6e-14	48.39	Vesicle transport protein GOT1A OS=Mus musculus OX=10090 GN=Golt1a PE=2 SV=1	[more]

BLAST of IVF0017856 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BYQ5	5.1e-26	59.69	vesicle transport protein GOT1B-like OS=Cucumis melo OX=3656 GN=LOC103494525 PE=...	[more]
A0A5D3CYI2	6.6e-26	62.10	Vesicle transport protein GOT1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0KU00	6.6e-26	58.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016390 PE=4 SV=1	[more]
A0A5A7TR70	8.7e-26	61.29	Vesicle transport protein GOT1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A061FRI8	1.9e-25	58.87	Got1/Sft2-like vescicle transport protein family isoform 1 OS=Theobroma cacao OX...	[more]

BLAST of IVF0017856 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453962.1	1.54e-34	59.69	PREDICTED: vesicle transport protein GOT1B-like [Cucumis melo] >XP_008453963.1 P...	[more]
XP_004152095.1	2.19e-34	58.91	vesicle transport protein GOT1 [Cucumis sativus] >XP_031740250.1 vesicle transpo...	[more]
TYK16973.1	2.60e-34	62.10	vesicle transport protein GOT1B-like [Cucumis melo var. makuwa]	[more]
XP_038879388.1	3.10e-34	58.14	vesicle transport protein GOT1-like [Benincasa hispida] >XP_038879468.1 vesicle ...	[more]
KAA0044616.1	3.69e-34	61.29	vesicle transport protein GOT1B-like [Cucumis melo var. makuwa]	[more]

BLAST of IVF0017856 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49420.1	1.5e-25	54.26	Got1/Sft2-like vescicle transport protein family	[more]
AT5G01430.1	1.5e-25	54.26	Got1/Sft2-like vescicle transport protein family	[more]
AT5G01430.2	1.5e-25	54.26	Got1/Sft2-like vescicle transport protein family	[more]
AT3G03180.1	3.7e-21	48.76	Got1/Sft2-like vescicle transport protein family	[more]
AT1G05785.1	1.5e-14	45.16	Got1/Sft2-like vescicle transport protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21493	CGI-141-RELATED/LIPASE CONTAINING PROTEIN	coord: 4..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0017856.2	IVF0017856.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane