IVF0017801 (gene) Melon (IVF77) v1

Overview


Name	IVF0017801
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Rab5-interacting
Location	chr12: 1782464 .. 1784665 (+)
RNA-Seq Expression	IVF0017801
Synteny	IVF0017801

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGTTTTAGAGAGAGATTTTGGTGACCCAATAATTTTCATTTAAAAAAAAAAAAAAGAACACTACAATTTCCCACTTCAGATTGAATCCAAATTTCACGAATTTTTTTTTAGAAATTTTGAATGGAGAGAGATTTACAGAAAGCCTTCTTCTGAATTTGTTTATTCGATTTCCCTCAATTTCATGGCGTTCTTGTTTTTTCCAAAACCCTAGTAATCAGTAGCATCTCCCATCTTCCCTCTCCATACTCTTCACTGGGTATCTCGAATTTTCCCCCAATTTTTCGATTTCGGAGCAGTCAGCATGAAGGACGGGAAAACTATGAAGGTCAATTCTCAGTTGCAGCATCAGAATGGTCACTTGCCACCCTTCAAATTGGCTAGATTGTTCGATCCAGAGACTTCATGGGATAAGGTTTCTTTAAACTTAGCTTTCTTCTGAATTCTATGCTTCACTTTTAAGCCCCGTGGAAATATTCTAATAATTTTATCTGTTTTGTTGGGTTTTGGAACTGAAGTTTTTATTGGTTTGTGTTATGCTGTTGTGAATTTTAGTTTCTAGCTAATAAAATCTGTGATTTTCCAATCAAGTTTAACGAGTTCAGATGGTTTATCATTATCTAGTGGGCATTGTTATGAAGATTGAGTTTCCTAGTTCGTTAAGTTTGAACTTAGTTCAATGGTGGTTGACATGCTCTCTCTTGAATGATTGAATGCCAATTCTCCCGGATATAGGACAGGGAAAGGAGCTAACTTGAGTATTAGGTCAAGTGACATATAATGTGTGTTAGTGATCAAGAGGTCTCTCGTTCTTATAATACTAAAAATAAAGGAAGAGTAAAGGGAAGCCATGGATGGGAGGTTTTGTGATACTTGGTACCTGCAATGAATTGAATGGAATTGTTTTTTGTTATTAAAGTTGTCTTTGTCTCGAATATTTTCTACAACATAGTTTTGTTCTGTTCTCAATACAGGATCAACTAGGAGATGTGTTGCATTGGATGAGACAGTCGGTTGCTCTTGTATGTGGGCTGCTTTGGGGCTCCATACCTCTGGTTGGAGGAATTTGGTTCATCTTGTAAGTTGCAATTCTTTTTATACTTCTTAGACATAGATGTGTTTAGGATCTCTTCTGATGGGCACATTGTTTTTGGAAAACATACTAATAATTAGATCACTTCAAGCACTGTGAAATGTTTACGTAATTGCTTTAATGAAACCGAACATTATGAAAAACTTGAAAATGTTTCTAAAAGAACTCCCAAATCACTATTAGTCTTTTGGGATTGAGATGGTTTATGAGTGGTTGTTTTTTACTTTTACTTCCATTAGCAATTCAAACATCCTCTCCACATCTTAATCTTTTTCATTAAGTCATTCAGTTCTCCAAAATGGATGTTTAGTCCAGTCCATAAATGCGTGCTCCTTGCTTTTCTCTTGAGAGATTAGATTCAACCACAAAATAGAAATTTTGATTGTCTTGTAATATTATTATCTGGAATAGCATATTTACATATTCATAATGCATAGTATTAAAATGTGTTATGAAATTCCATCATTCAGACATTTGGGTTTAGACAGCTATGGACGATGGAGTCATTACTCTATGCATTTTTTTTAGTTCTCTCCATTATACATTTCTTTTCTTTCACTCAGAACACTTGAGTTGATCTTGTGAGTTTGGTCTTATTTTCAGATTCTTGGTGATATCAACCACGATGATATATGGATATTATGCAATGATATTGAAGGTAGATGAAGAAGAATTCGGTGGTCATGGAGTTCTCCTCCAGGAAGGGCTGTTTGCTTCCGTAACTCTGTTTCTGGTAATCCAATGCCATCATTTAAATTATAAACCTTCATCTTCTTTTGAAAGTTGCTGAGTCTTTTGTTAGTTCAAGTGCTTAATTTTCATTTTCTCTCTGCTGTTCAGCTTATGTGGACCCTCATTTATAGCTTGGGACACTTCTGACAATGGTTTTGTCAACGTTCTCGAAATCGGCCAAAGCATCAGTGGAGAGGTTGGTCGCCATTGTTGCTTGCTCTTTTATTAGTGAATGTGCAGTACCTTACTGTTAAGGAGTGAAAACGCTTTTAGAAGTGGATTAATTTCATTAGGATTACAATTAACCAAAGTTTAGAAATTATTTACTCTGTTAGATCCAATCCAATCTTAAATCAATAAAATCTTTACCGAAATGTCG

mRNA sequence

AGGTTTTAGAGAGAGATTTTGGTGACCCAATAATTTTCATTTAAAAAAAAAAAAAAGAACACTACAATTTCCCACTTCAGATTGAATCCAAATTTCACGAATTTTTTTTTAGAAATTTTGAATGGAGAGAGATTTACAGAAAGCCTTCTTCTGAATTTGTTTATTCGATTTCCCTCAATTTCATGGCGTTCTTGTTTTTTCCAAAACCCTAGTAATCAGTAGCATCTCCCATCTTCCCTCTCCATACTCTTCACTGGGTATCTCGAATTTTCCCCCAATTTTTCGATTTCGGAGCAGTCAGCATGAAGGACGGGAAAACTATGAAGGTCAATTCTCAGTTGCAGCATCAGAATGGTCACTTGCCACCCTTCAAATTGGCTAGATTGTTCGATCCAGAGACTTCATGGGATAAGGATCAACTAGGAGATGTGTTGCATTGGATGAGACAGTCGGTTGCTCTTGTATGTGGGCTGCTTTGGGGCTCCATACCTCTGGTTGGAGGAATTTGGTTCATCTTATTCTTGGTGATATCAACCACGATGATATATGGATATTATGCAATGATATTGAAGGTAGATGAAGAAGAATTCGGTGGTCATGGAGTTCTCCTCCAGGAAGGGCTGTTTGCTTCCGTAACTCTGTTTCTGCTTATGTGGACCCTCATTTATAGCTTGGGACACTTCTGACAATGGTTTTGTCAACGTTCTCGAAATCGGCCAAAGCATCAGTGGAGAGGTTGGTCGCCATTGTTGCTTGCTCTTTTATTAGTGAATGTGCAGTACCTTACTGTTAAGGAGTGAAAACGCTTTTAGAAGTGGATTAATTTCATTAGGATTACAATTAACCAAAGTTTAGAAATTATTTACTCTGTTAGATCCAATCCAATCTTAAATCAATAAAATCTTTACCGAAATGTCG

Coding sequence (CDS)

ATGAAGGACGGGAAAACTATGAAGGTCAATTCTCAGTTGCAGCATCAGAATGGTCACTTGCCACCCTTCAAATTGGCTAGATTGTTCGATCCAGAGACTTCATGGGATAAGGATCAACTAGGAGATGTGTTGCATTGGATGAGACAGTCGGTTGCTCTTGTATGTGGGCTGCTTTGGGGCTCCATACCTCTGGTTGGAGGAATTTGGTTCATCTTATTCTTGGTGATATCAACCACGATGATATATGGATATTATGCAATGATATTGAAGGTAGATGAAGAAGAATTCGGTGGTCATGGAGTTCTCCTCCAGGAAGGGCTGTTTGCTTCCGTAACTCTGTTTCTGCTTATGTGGACCCTCATTTATAGCTTGGGACACTTCTGA

Protein sequence

MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLLMWTLIYSLGHF

Homology

[Close]

BLAST of IVF0017801 vs. ExPASy Swiss-Prot
Match: Q9CQT9 (Respirasome Complex Assembly Factor 1 OS=Mus musculus OX=10090 GN=Rab5if PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.3e-17
Identity = 45/128 (35.16%), Postives = 76/128 (59.38%), Query Frame = 0


Query: 1   MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLW 60
           M  G+  +   Q Q  NG L     +++   + +W DKD+  DV++W RQ +ALV G++W
Sbjct: 1   MSGGRRKEEPPQPQLANGALKVSVWSKVLRSDAAWDDKDEFLDVIYWFRQIIALVLGVIW 60

Query: 61  GSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLLMWT 120
           G +PL G +    F +I+  ++Y Y++  L++DEEE+GG   L +EG   S  LF+++W 
Sbjct: 61  GVLPLRGFLGIAGFCLINAGVLYLYFSNYLQIDEEEYGGTWELTKEGFMTSFALFMVIWI 120

Query: 121 LIYSLGHF 128
           + Y+  H+
Sbjct: 121 IFYTAIHY 128

[Close]

BLAST of IVF0017801 vs. ExPASy Swiss-Prot
Match: Q9BUV8 (Respirasome Complex Assembly Factor 1 OS=Homo sapiens OX=9606 GN=RAB5IF PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 8.9e-15
Identity = 43/127 (33.86%), Postives = 73/127 (57.48%), Query Frame = 0


Query: 1   MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLW 60
           M  G+  +   Q Q  NG L     +++   + +W DKD+  DV++W RQ +A+V G++W
Sbjct: 1   MSGGRRKEEPPQPQLANGALKVSVWSKVLRSDAAWEDKDEFLDVIYWFRQIIAVVLGVIW 60

Query: 61  GSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLLMWT 120
           G +PL G +    F +I+  ++Y Y++  L++DEEE+GG   L +EG   S  LF++   
Sbjct: 61  GVLPLRGFLGIAGFCLINAGVLYLYFSNYLQIDEEEYGGTWELTKEGFMTSFALFMVCVA 120

Query: 121 LIYSLGH 127
             ++ GH
Sbjct: 121 DSFTTGH 127

[Close]

BLAST of IVF0017801 vs. ExPASy TrEMBL
Match: A0A1S3C692 (uncharacterized protein C20orf24 homolog OS=Cucumis melo OX=3656 GN=LOC103497150 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 6.1e-67
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60
           MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG
Sbjct: 1   MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60

Query: 61  SIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLLMWTL 120
           SIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLLMWTL
Sbjct: 61  SIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLLMWTL 120

Query: 121 IYSLGHF 128
           IYSLGHF
Sbjct: 121 IYSLGHF 127

[Close]

BLAST of IVF0017801 vs. ExPASy TrEMBL
Match: A0A6J1G9S8 (uncharacterized protein C20orf24 homolog OS=Cucurbita moschata OX=3662 GN=LOC111452238 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.2e-64
Identity = 119/127 (93.70%), Postives = 125/127 (98.43%), Query Frame = 0


Query: 1   MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60
           MKDGK++KVNSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWG
Sbjct: 1   MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWG 60

Query: 61  SIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLLMWTL 120
           S+PLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGHGVLLQEGLFAS+TLFLLMWTL
Sbjct: 61  SVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITLFLLMWTL 120

Query: 121 IYSLGHF 128
           +YSLGHF
Sbjct: 121 VYSLGHF 127

[Close]

BLAST of IVF0017801 vs. ExPASy TrEMBL
Match: A0A6J1KGG2 (uncharacterized protein C20orf24 homolog OS=Cucurbita maxima OX=3661 GN=LOC111493006 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 4.8e-64
Identity = 118/127 (92.91%), Postives = 125/127 (98.43%), Query Frame = 0


Query: 1   MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60
           MKDGK++KVNSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWG
Sbjct: 1   MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWG 60

Query: 61  SIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLLMWTL 120
           S+PLVGGIWFI+FLVISTTM+YGYYAMILKVDEEEFGGHGVLLQEGLFAS+TLFLLMWTL
Sbjct: 61  SVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITLFLLMWTL 120

Query: 121 IYSLGHF 128
           +YSLGHF
Sbjct: 121 VYSLGHF 127

[Close]

BLAST of IVF0017801 vs. ExPASy TrEMBL
Match: A0A0A0LY22 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523070 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63
Identity = 122/127 (96.06%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 1   MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60
           MKDGK+MKVNSQLQ QNGHLPPFKLA+LFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG
Sbjct: 1   MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60

Query: 61  SIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLLMWTL 120
           SIPLVGG+WFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFAS+TLFLLMWTL
Sbjct: 61  SIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASITLFLLMWTL 120

Query: 121 IYSLGHF 128
           IYSLGHF
Sbjct: 121 IYSLGHF 126

[Close]

BLAST of IVF0017801 vs. ExPASy TrEMBL
Match: A0A5A7VQ84 (Rab5-interacting OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002120 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.5e-60
Identity = 119/127 (93.70%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 1   MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60
           MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG
Sbjct: 1   MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60

Query: 61  SIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLLMWTL 120
           SIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLL   L
Sbjct: 61  SIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLLGTLL 120

Query: 121 IYSLGHF 128
              L  F
Sbjct: 121 TMVLSTF 127

[Close]

BLAST of IVF0017801 vs. NCBI nr
Match: XP_008457469.1 (PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo])

HSP 1 Score: 261 bits (667), Expect = 5.84e-88
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60
           MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG
Sbjct: 1   MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60

Query: 61  SIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLLMWTL 120
           SIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLLMWTL
Sbjct: 61  SIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLLMWTL 120

Query: 121 IYSLGHF 127
           IYSLGHF
Sbjct: 121 IYSLGHF 127

[Close]

BLAST of IVF0017801 vs. NCBI nr
Match: XP_038895585.1 (respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 255 bits (652), Expect = 1.14e-85
Identity = 122/127 (96.06%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 1   MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60
           MKDGK+ KVNSQLQHQNGHLPPFKLA+LFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG
Sbjct: 1   MKDGKSTKVNSQLQHQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60

Query: 61  SIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLLMWTL 120
           SIPLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGHGVLLQEGLFAS+TLFLLMWTL
Sbjct: 61  SIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITLFLLMWTL 120

Query: 121 IYSLGHF 127
           IYSLGHF
Sbjct: 121 IYSLGHF 127

[Close]

BLAST of IVF0017801 vs. NCBI nr
Match: XP_022948613.1 (uncharacterized protein C20orf24 homolog [Cucurbita moschata] >XP_023523192.1 uncharacterized protein C20orf24 homolog [Cucurbita pepo subsp. pepo] >KAG6607251.1 Respirasome Complex Assembly Factor 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036935.1 hypothetical protein SDJN02_00555 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 253 bits (645), Expect = 1.33e-84
Identity = 119/127 (93.70%), Postives = 125/127 (98.43%), Query Frame = 0


Query: 1   MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60
           MKDGK++KVNSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWG
Sbjct: 1   MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWG 60

Query: 61  SIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLLMWTL 120
           S+PLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGHGVLLQEGLFAS+TLFLLMWTL
Sbjct: 61  SVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITLFLLMWTL 120

Query: 121 IYSLGHF 127
           +YSLGHF
Sbjct: 121 VYSLGHF 127

[Close]

BLAST of IVF0017801 vs. NCBI nr
Match: XP_022998338.1 (uncharacterized protein C20orf24 homolog [Cucurbita maxima])

HSP 1 Score: 251 bits (642), Expect = 3.81e-84
Identity = 118/127 (92.91%), Postives = 125/127 (98.43%), Query Frame = 0


Query: 1   MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60
           MKDGK++KVNSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWG
Sbjct: 1   MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWG 60

Query: 61  SIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLLMWTL 120
           S+PLVGGIWFI+FLVISTTM+YGYYAMILKVDEEEFGGHGVLLQEGLFAS+TLFLLMWTL
Sbjct: 61  SVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITLFLLMWTL 120

Query: 121 IYSLGHF 127
           +YSLGHF
Sbjct: 121 VYSLGHF 127

[Close]

BLAST of IVF0017801 vs. NCBI nr
Match: XP_004145291.1 (uncharacterized protein RAB5IF homolog [Cucumis sativus] >KGN65732.1 hypothetical protein Csa_019550 [Cucumis sativus])

HSP 1 Score: 250 bits (638), Expect = 1.50e-83
Identity = 122/127 (96.06%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 1   MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60
           MKDGK+MKVNSQLQ QNGHLPPFKLA+LFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG
Sbjct: 1   MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60

Query: 61  SIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLLMWTL 120
           SIPLVGG+WFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFAS+TLFLLMWTL
Sbjct: 61  SIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASITLFLLMWTL 120

Query: 121 IYSLGHF 127
           IYSLGHF
Sbjct: 121 IYSLGHF 126

[Close]

BLAST of IVF0017801 vs. TAIR 10
Match: AT5G59410.1 (Rab5-interacting family protein )

HSP 1 Score: 196.8 bits (499), Expect = 1.0e-50
Identity = 94/130 (72.31%), Postives = 107/130 (82.31%), Query Frame = 0


Query: 1   MKDGKTMKVN---SQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGL 60
           MK+ K+ K+N    Q  HQN HL P KLA+LFDP+ SWDKDQLGDVLHW+RQ V L+ GL
Sbjct: 1   MKESKSAKLNQLQQQENHQNAHLSPSKLAKLFDPDASWDKDQLGDVLHWIRQVVGLISGL 60

Query: 61  LWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLLM 120
           LWGSIPLVGGIW ILFL IS+ ++YGYYAMILKVDEE+FGGH  LLQEGLFAS+TLFLL 
Sbjct: 61  LWGSIPLVGGIWIILFLAISSGIVYGYYAMILKVDEEDFGGHAALLQEGLFASLTLFLLA 120

Query: 121 WTLIYSLGHF 128
           W L+YSL HF
Sbjct: 121 WILVYSLAHF 130

[Close]

BLAST of IVF0017801 vs. TAIR 10
Match: AT2G29020.1 (Rab5-interacting family protein )

HSP 1 Score: 185.3 bits (469), Expect = 3.1e-47
Identity = 86/133 (64.66%), Postives = 106/133 (79.70%), Query Frame = 0


Query: 1   MKDGKTMKVNS------QLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALV 60
           MK+GK+ K +S      Q+ HQN HL  F  A+LFD E SWDKDQLGDVLHW+RQ V L+
Sbjct: 1   MKEGKSSKSSSQQEQHEQIYHQNSHLGSFNFAKLFDSEASWDKDQLGDVLHWIRQVVGLL 60

Query: 61  CGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLF 120
           CGLLWG+IPLVGGIW +LFL IS+ ++YGYYA++LK+DEE+FGGH  LLQ+GLFAS++LF
Sbjct: 61  CGLLWGAIPLVGGIWLLLFLAISSGIVYGYYALVLKIDEEDFGGHAALLQDGLFASLSLF 120

Query: 121 LLMWTLIYSLGHF 128
           LL W L+YSL  F
Sbjct: 121 LLAWILVYSLSSF 133

The following BLAST results are available for this feature:

BLAST of IVF0017801 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CQT9	3.3e-17	35.16	Respirasome Complex Assembly Factor 1 OS=Mus musculus OX=10090 GN=Rab5if PE=1 SV...	[more]
Q9BUV8	8.9e-15	33.86	Respirasome Complex Assembly Factor 1 OS=Homo sapiens OX=9606 GN=RAB5IF PE=1 SV=...	[more]

BLAST of IVF0017801 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C692	6.1e-67	100.00	uncharacterized protein C20orf24 homolog OS=Cucumis melo OX=3656 GN=LOC103497150...	[more]
A0A6J1G9S8	2.2e-64	93.70	uncharacterized protein C20orf24 homolog OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KGG2	4.8e-64	92.91	uncharacterized protein C20orf24 homolog OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A0A0LY22	1.4e-63	96.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523070 PE=4 SV=1	[more]
A0A5A7VQ84	9.5e-60	93.70	Rab5-interacting OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002...	[more]

BLAST of IVF0017801 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457469.1	5.84e-88	100.00	PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]	[more]
XP_038895585.1	1.14e-85	96.06	respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida]	[more]
XP_022948613.1	1.33e-84	93.70	uncharacterized protein C20orf24 homolog [Cucurbita moschata] >XP_023523192.1 un...	[more]
XP_022998338.1	3.81e-84	92.91	uncharacterized protein C20orf24 homolog [Cucurbita maxima]	[more]
XP_004145291.1	1.50e-83	96.06	uncharacterized protein RAB5IF homolog [Cucumis sativus] >KGN65732.1 hypothetica...	[more]

BLAST of IVF0017801 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59410.1	1.0e-50	72.31	Rab5-interacting family protein	[more]
AT2G29020.1	3.1e-47	64.66	Rab5-interacting family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029008	Rab5-interacting protein family	PFAM	PF07019	Rab5ip	coord: 43..122 e-value: 6.5E-14 score: 52.2
None	No IPR available	PANTHER	PTHR12906:SF2	BNAA04G16800D PROTEIN	coord: 3..127
IPR010742	Rab5-interacting protein	PANTHER	PTHR12906	PROTEIN C20ORF24 RAB5-INTERACTING PROTEIN	coord: 3..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0017801.1	IVF0017801.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006996	organelle organization
cellular_component	GO:0016021	integral component of membrane