IVF0017776 (gene) Melon (IVF77) v1

Overview
NameIVF0017776
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposase
Locationchr08: 24478243 .. 24478758 (+)
RNA-Seq ExpressionIVF0017776
SyntenyIVF0017776
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAGCATTTCCAGTGGTTTCTGACACCGGACAAGCGTTCGCCACTCGTTGGAAGCATTGGCTATCTTTTGAACCGTTTTGGGTCGCACCTCACTTCTCCCTCCATCGAGCTCGCTTCCCGACCTATGCCTGGGGAAAACGTGTCAGGGAGCATGCGAGGAGTGTGGGTTGAGGTTCTTGAAGTATCAGCCCTGAAGATCAAAATACTTATGGCCAATAAGAAGCAAAGAGAAGAAATCGTCGGGGGAACGCTTTTTCTCATAGGACGAGAAAACTATGTCCGGGGAGTTCTCGCTCGCATTTTCATGGGACGAGCACCAGAAGTTCTCGAGTTTTTCCTGTGTCCTTCGCAGCAAGTGCATTTCAAGGTGTTTCTGACACTGGACGAGCGTTCGCCGCTCATTGGAAGCAATGGCCATCTTTTGGACTGTTTGGGTCCCACCTCAGTTCTCCCTCCAACGAGCTCGCTTCCTGAACTATATCTTGGGAAAACGTGTCATGAAGCATGCTAA

mRNA sequence

ATGAAAGAGCATTTCCAGTGGTTTCTGACACCGGACAAGCGTTCGCCACTCGTTGGAAGCATTGGCTATCTTTTGAACCGTTTTGGGTCGCACCTCACTTCTCCCTCCATCGAGCTCGCTTCCCGACCTATGCCTGGGGAAAACGTGTCAGGGAGCATGCGAGGAGTGTGGGTTGAGGTTCTTGAAGTATCAGCCCTGAAGATCAAAATACTTATGGCCAATAAGAAGCAAAGAGAAGAAATCGTCGGGGGAACGCTTTTTCTCATAGGACGAGAAAACTATGTCCGGGGAGTTCTCGCTCGCATTTTCATGGGACGAGCACCAGAAGTTCTCGAGTTTTTCCTGTGTCCTTCGCAGCAAGTGCATTTCAAGGTGTTTCTGACACTGGACGAGCGTTCGCCGCTCATTGGAAGCAATGGCCATCTTTTGGACTGTTTGGGTCCCACCTCAGTTCTCCCTCCAACGAGCTCGCTTCCTGAACTATATCTTGGGAAAACGTGTCATGAAGCATGCTAA

Coding sequence (CDS)

ATGAAAGAGCATTTCCAGTGGTTTCTGACACCGGACAAGCGTTCGCCACTCGTTGGAAGCATTGGCTATCTTTTGAACCGTTTTGGGTCGCACCTCACTTCTCCCTCCATCGAGCTCGCTTCCCGACCTATGCCTGGGGAAAACGTGTCAGGGAGCATGCGAGGAGTGTGGGTTGAGGTTCTTGAAGTATCAGCCCTGAAGATCAAAATACTTATGGCCAATAAGAAGCAAAGAGAAGAAATCGTCGGGGGAACGCTTTTTCTCATAGGACGAGAAAACTATGTCCGGGGAGTTCTCGCTCGCATTTTCATGGGACGAGCACCAGAAGTTCTCGAGTTTTTCCTGTGTCCTTCGCAGCAAGTGCATTTCAAGGTGTTTCTGACACTGGACGAGCGTTCGCCGCTCATTGGAAGCAATGGCCATCTTTTGGACTGTTTGGGTCCCACCTCAGTTCTCCCTCCAACGAGCTCGCTTCCTGAACTATATCTTGGGAAAACGTGTCATGAAGCATGCTAA

Protein sequence

MKEHFQWFLTPDKRSPLVGSIGYLLNRFGSHLTSPSIELASRPMPGENVSGSMRGVWVEVLEVSALKIKILMANKKQREEIVGGTLFLIGRENYVRGVLARIFMGRAPEVLEFFLCPSQQVHFKVFLTLDERSPLIGSNGHLLDCLGPTSVLPPTSSLPELYLGKTCHEAC
Homology
BLAST of IVF0017776 vs. ExPASy TrEMBL
Match: A0A5A7V5Z6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001940 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 4.5e-49
Identity = 108/170 (63.53%), Postives = 128/170 (75.29%), Query Frame = 0

Query: 1   MKEHFQWFLTPDKRSPLVGSIGYLLNRFGSHLTSPSIELASRPMPGENVSGSMRGVWVEV 60
           ++ HFQ FLTP++ SPLV SIG+LL+RFG   +SPS ELASRP+P ENVSGSM GVWV+V
Sbjct: 300 LQVHFQCFLTPNECSPLVRSIGHLLDRFGLRHSSPSNELASRPIPLENVSGSMPGVWVQV 359

Query: 61  LEVSALKIKILMANKKQREEIVGGTLFLIGRENYVRGVLARIFMGRAPEVLEFFLCPSQQ 120
           L   A KI+ L+ N +Q EE V G LF  GREN+VRG+LA +F+GRAP+VLE    PS Q
Sbjct: 360 LGARAPKIERLITNTEQSEETVRGLLFTPGRENWVRGILAPVFLGRAPKVLELSPFPSLQ 419

Query: 121 VHFKVFLTLDERSPLIGSNGHLLDCLGPTSVLPPTSSLPELYLGKTCHEA 171
           VHF+ FLT DERS L+GS GHLL  LG   VLP TSSLP+LYL KTC  A
Sbjct: 420 VHFQWFLTPDERSLLVGSIGHLLIVLGRAIVLPLTSSLPDLYLRKTCQGA 469

BLAST of IVF0017776 vs. ExPASy TrEMBL
Match: A0A5D3BQ75 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00560 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.2e-47
Identity = 105/163 (64.42%), Postives = 123/163 (75.46%), Query Frame = 0

Query: 8   FLTPDKRSPLVGSIGYLLNRFGSHLTSPSIELASRPMPGENVSGSMRGVWVEVLEVSALK 67
           FLTP++ SPLV SIG+LL+RFG   +SPS ELASRP+P ENVSGSM GVWV+VL   A K
Sbjct: 260 FLTPNECSPLVRSIGHLLDRFGLRHSSPSNELASRPIPLENVSGSMPGVWVQVLGARAPK 319

Query: 68  IKILMANKKQREEIVGGTLFLIGRENYVRGVLARIFMGRAPEVLEFFLCPSQQVHFKVFL 127
           I+ L+ N +Q EE V G LF  GREN+VRG+LA +F+GRAP+VLE    PS QVHF+ FL
Sbjct: 320 IERLITNTEQSEETVRGLLFTPGRENWVRGILAPVFLGRAPKVLELSPFPSLQVHFQWFL 379

Query: 128 TLDERSPLIGSNGHLLDCLGPTSVLPPTSSLPELYLGKTCHEA 171
           T DERS L+GS GHLL  LG   VLP TSSLP+LYL KTC  A
Sbjct: 380 TPDERSLLVGSIGHLLIVLGRAIVLPLTSSLPDLYLWKTCQGA 422

BLAST of IVF0017776 vs. ExPASy TrEMBL
Match: A0A5A7SRN5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G001510 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.8e-21
Identity = 58/95 (61.05%), Postives = 69/95 (72.63%), Query Frame = 0

Query: 53  MRGVWVEVLEVSALKIKILMANKKQREEIVGGTLFLIGRENYVRGVLARIFMGRAPEVLE 112
           M GVWVEVL V A KI+ LM+N KQREE VGG+LF  GREN V  +LA +F G+  EVLE
Sbjct: 1   MPGVWVEVLRVRAPKIERLMSNTKQREETVGGSLFTPGRENLVWRILALVFFGQTMEVLE 60

Query: 113 FFLCPSQQVHFKVFLTLDERSPLIGSNGHLLDCLG 148
               PS +VHF+ FLT +E SPL+GS GH+LDC G
Sbjct: 61  LSPFPSLEVHFQWFLTQNECSPLVGSIGHVLDCFG 95

BLAST of IVF0017776 vs. ExPASy TrEMBL
Match: A0A5A7T267 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G001870 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 4.4e-20
Identity = 51/73 (69.86%), Postives = 61/73 (83.56%), Query Frame = 0

Query: 4   HFQWFLTPDKRSPLVGSIGYLLNRFGSHLTSPSIELASRPMPGENVSGSMRGVWVEVLEV 63
           HFQWFLTPD+RSPL+ SIG+LL+RFG HL+SPS ELASRP+P +N+SGSM GVWVE + V
Sbjct: 384 HFQWFLTPDERSPLIESIGHLLDRFGLHLSSPSNELASRPIPWKNLSGSMPGVWVEFIGV 443

Query: 64  SALKIKILMANKK 77
            A KI+ LM N K
Sbjct: 444 RAPKIERLMTNTK 456

BLAST of IVF0017776 vs. ExPASy TrEMBL
Match: A0A5A7V638 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001830 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 7.3e-07
Identity = 32/52 (61.54%), Postives = 37/52 (71.15%), Query Frame = 0

Query: 96  RGVLARIFMGRAPEVLEFFLCPSQQVHFKVFLTLDERSPLIGSNGHLLDCLG 148
           RG+LARIF+GR  +VLE    PS QVHF+ FLT DERSP + S  HLLD  G
Sbjct: 171 RGILARIFLGRTLKVLELSPFPSLQVHFQWFLTPDERSPFVESISHLLDRYG 222

BLAST of IVF0017776 vs. NCBI nr
Match: KAA0062674.1 (uncharacterized protein E6C27_scaffold79G001940 [Cucumis melo var. makuwa])

HSP 1 Score: 204 bits (518), Expect = 4.56e-60
Identity = 108/170 (63.53%), Postives = 128/170 (75.29%), Query Frame = 0

Query: 1   MKEHFQWFLTPDKRSPLVGSIGYLLNRFGSHLTSPSIELASRPMPGENVSGSMRGVWVEV 60
           ++ HFQ FLTP++ SPLV SIG+LL+RFG   +SPS ELASRP+P ENVSGSM GVWV+V
Sbjct: 300 LQVHFQCFLTPNECSPLVRSIGHLLDRFGLRHSSPSNELASRPIPLENVSGSMPGVWVQV 359

Query: 61  LEVSALKIKILMANKKQREEIVGGTLFLIGRENYVRGVLARIFMGRAPEVLEFFLCPSQQ 120
           L   A KI+ L+ N +Q EE V G LF  GREN+VRG+LA +F+GRAP+VLE    PS Q
Sbjct: 360 LGARAPKIERLITNTEQSEETVRGLLFTPGRENWVRGILAPVFLGRAPKVLELSPFPSLQ 419

Query: 121 VHFKVFLTLDERSPLIGSNGHLLDCLGPTSVLPPTSSLPELYLGKTCHEA 170
           VHF+ FLT DERS L+GS GHLL  LG   VLP TSSLP+LYL KTC  A
Sbjct: 420 VHFQWFLTPDERSLLVGSIGHLLIVLGRAIVLPLTSSLPDLYLRKTCQGA 469

BLAST of IVF0017776 vs. NCBI nr
Match: TYK01208.1 (uncharacterized protein E5676_scaffold2044G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 197 bits (500), Expect = 7.44e-58
Identity = 105/163 (64.42%), Postives = 123/163 (75.46%), Query Frame = 0

Query: 8   FLTPDKRSPLVGSIGYLLNRFGSHLTSPSIELASRPMPGENVSGSMRGVWVEVLEVSALK 67
           FLTP++ SPLV SIG+LL+RFG   +SPS ELASRP+P ENVSGSM GVWV+VL   A K
Sbjct: 260 FLTPNECSPLVRSIGHLLDRFGLRHSSPSNELASRPIPLENVSGSMPGVWVQVLGARAPK 319

Query: 68  IKILMANKKQREEIVGGTLFLIGRENYVRGVLARIFMGRAPEVLEFFLCPSQQVHFKVFL 127
           I+ L+ N +Q EE V G LF  GREN+VRG+LA +F+GRAP+VLE    PS QVHF+ FL
Sbjct: 320 IERLITNTEQSEETVRGLLFTPGRENWVRGILAPVFLGRAPKVLELSPFPSLQVHFQWFL 379

Query: 128 TLDERSPLIGSNGHLLDCLGPTSVLPPTSSLPELYLGKTCHEA 170
           T DERS L+GS GHLL  LG   VLP TSSLP+LYL KTC  A
Sbjct: 380 TPDERSLLVGSIGHLLIVLGRAIVLPLTSSLPDLYLWKTCQGA 422

BLAST of IVF0017776 vs. NCBI nr
Match: KAA0032047.1 (hypothetical protein E6C27_scaffold134G001510 [Cucumis melo var. makuwa])

HSP 1 Score: 112 bits (281), Expect = 9.77e-29
Identity = 58/95 (61.05%), Postives = 69/95 (72.63%), Query Frame = 0

Query: 53  MRGVWVEVLEVSALKIKILMANKKQREEIVGGTLFLIGRENYVRGVLARIFMGRAPEVLE 112
           M GVWVEVL V A KI+ LM+N KQREE VGG+LF  GREN V  +LA +F G+  EVLE
Sbjct: 1   MPGVWVEVLRVRAPKIERLMSNTKQREETVGGSLFTPGRENLVWRILALVFFGQTMEVLE 60

Query: 113 FFLCPSQQVHFKVFLTLDERSPLIGSNGHLLDCLG 147
               PS +VHF+ FLT +E SPL+GS GH+LDC G
Sbjct: 61  LSPFPSLEVHFQWFLTQNECSPLVGSIGHVLDCFG 95

BLAST of IVF0017776 vs. NCBI nr
Match: WP_206746731.1 (hypothetical protein, partial [Helicobacter pylori])

HSP 1 Score: 103 bits (256), Expect = 2.78e-25
Identity = 54/83 (65.06%), Postives = 60/83 (72.29%), Query Frame = 0

Query: 53  MRGVWVEVLEVSALKIKILMANKKQREEIVGGTLFLIGRENYVRGVLARIFMGRAPEVLE 112
           M GVWVEVL     KI+ LM N +QREE VGG LF  GREN VRG+  R+F+GRAPEVLE
Sbjct: 1   MPGVWVEVLGARDPKIERLMTNTEQREETVGGPLFTPGRENRVRGIPPRVFLGRAPEVLE 60

Query: 113 FFLCPSQQVHFKVFLTLDERSPL 135
               PS QVHF+ FLT DERSPL
Sbjct: 61  LSPFPSLQVHFQWFLTPDERSPL 83

BLAST of IVF0017776 vs. NCBI nr
Match: KAA0035525.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 107 bits (267), Expect = 9.84e-24
Identity = 51/73 (69.86%), Postives = 61/73 (83.56%), Query Frame = 0

Query: 4   HFQWFLTPDKRSPLVGSIGYLLNRFGSHLTSPSIELASRPMPGENVSGSMRGVWVEVLEV 63
           HFQWFLTPD+RSPL+ SIG+LL+RFG HL+SPS ELASRP+P +N+SGSM GVWVE + V
Sbjct: 384 HFQWFLTPDERSPLIESIGHLLDRFGLHLSSPSNELASRPIPWKNLSGSMPGVWVEFIGV 443

Query: 64  SALKIKILMANKK 76
            A KI+ LM N K
Sbjct: 444 RAPKIERLMTNTK 456

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V5Z64.5e-4963.53Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BQ757.2e-4764.42Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SRN51.8e-2161.05Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7T2674.4e-2069.86Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G001870 P... [more]
A0A5A7V6387.3e-0761.54Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0062674.14.56e-6063.53uncharacterized protein E6C27_scaffold79G001940 [Cucumis melo var. makuwa][more]
TYK01208.17.44e-5864.42uncharacterized protein E5676_scaffold2044G00560 [Cucumis melo var. makuwa][more]
KAA0032047.19.77e-2961.05hypothetical protein E6C27_scaffold134G001510 [Cucumis melo var. makuwa][more]
WP_206746731.12.78e-2565.06hypothetical protein, partial [Helicobacter pylori][more]
KAA0035525.19.84e-2469.86transposase [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0017776.2IVF0017776.2mRNA