IVF0017729 (gene) Melon (IVF77) v1

Overview
NameIVF0017729
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr03: 19574421 .. 19574867 (+)
RNA-Seq ExpressionIVF0017729
SyntenyIVF0017729
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTGACCTTTCTCTATTCTACTACTTCCTTCTCATCTTCTTCCTCTCTTACACGACGCTTCCCCAACTACCATTTTCGTTTAAGAAATTTCCCCATCTTCCTTCACAATTGGTCTCTTTCTTCCTTTCTCTATGATTCTCTGTTCATTGTTGGCAGAACAGGTTTTGTGTTATTAATCCCAGCTCTTACTCTATTTTTGATCTTCTTTTCTGCTGCTTCTGCTGCATTTCAGTTTTTGTTGGAATGACGGTTTTGCTAGATTTTGGACGTCGGGTTTGTGTTCTTGTGTTTGATTGTGGTTTTTGCCATCTGGGATTCAGTGGAATGAGTTTCTAGTGGAGTTTTGAACTTGTGTTTCTTTGAGTTGTTTTGTTCTGGTTCGATTCCTCCATCTGGGTGTTTCTTGAATGTGTTGGTGTGTGAGTTTCTAGCAGATATTTGA

mRNA sequence

ATGGCTTTGACCTTTCTCTATTCTACTACTTCCTTCTCATCTTCTTCCTCTCTTACACGACGCTTCCCCAACTACCATTTTCGTTTAAGAAATTTCCCCATCTTCCTTCACAATTGGTCTCTTTCTTCCTTTCTCTATGATTCTCTGTTCATTGTTGGCAGAACAGGTTTTGTGTTATTAATCCCAGCTCTTACTCTATTTTTGATCTTCTTTTCTGCTGCTTCTGCTGCATTTCATGGAGTTTTGAACTTGTGTTTCTTTGAGTTGTTTTGTTCTGGTTCGATTCCTCCATCTGGGTGTTTCTTGAATGTGTTGGTGTGTGAGTTTCTAGCAGATATTTGA

Coding sequence (CDS)

ATGGCTTTGACCTTTCTCTATTCTACTACTTCCTTCTCATCTTCTTCCTCTCTTACACGACGCTTCCCCAACTACCATTTTCGTTTAAGAAATTTCCCCATCTTCCTTCACAATTGGTCTCTTTCTTCCTTTCTCTATGATTCTCTGTTCATTGTTGGCAGAACAGGTTTTGTGTTATTAATCCCAGCTCTTACTCTATTTTTGATCTTCTTTTCTGCTGCTTCTGCTGCATTTCATGGAGTTTTGAACTTGTGTTTCTTTGAGTTGTTTTGTTCTGGTTCGATTCCTCCATCTGGGTGTTTCTTGAATGTGTTGGTGTGTGAGTTTCTAGCAGATATTTGA

Protein sequence

MALTFLYSTTSFSSSSSLTRRFPNYHFRLRNFPIFLHNWSLSSFLYDSLFIVGRTGFVLLIPALTLFLIFFSAASAAFHGVLNLCFFELFCSGSIPPSGCFLNVLVCEFLADI
Homology
[Close]
BLAST of IVF0017729 vs. ExPASy TrEMBL
Match: A0A0A0K8L2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046430 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.7e-42
Identity = 98/113 (86.73%), Postives = 100/113 (88.50%), Query Frame = 0 

Query: 1   MALTFLYSTTSFSSSSSLTRRFPNYHFRLRNFPIFLHNWSLSSFLYDSLFIVGRTGFVLL 60
           MALTFLYSTTSFSSSSSLTRRFPNYHFRLRN PIFLHNWSLSSFL  SLFI GR GFVLL
Sbjct: 1   MALTFLYSTTSFSSSSSLTRRFPNYHFRLRNSPIFLHNWSLSSFLNHSLFITGRIGFVLL 60

Query: 61  IPALTLFLIFFSAASAAFHGVLNLCFFELFCSGSIPPSGCFLNVLVCEFLADI 114
           IPALTL  IFF+AASAAFHGVLNL F  L CSGSIPPSG FLNVLVCE LA+I
Sbjct: 61  IPALTLLFIFFAAASAAFHGVLNLGFSGLCCSGSIPPSGYFLNVLVCELLAEI 113

[Close]
BLAST of IVF0017729 vs. NCBI nr
Match: KGN46065.1 (hypothetical protein Csa_005338 [Cucumis sativus])

HSP 1 Score: 183 bits (465), Expect = 1.34e-57
Identity = 98/113 (86.73%), Postives = 100/113 (88.50%), Query Frame = 0 

Query: 1   MALTFLYSTTSFSSSSSLTRRFPNYHFRLRNFPIFLHNWSLSSFLYDSLFIVGRTGFVLL 60
           MALTFLYSTTSFSSSSSLTRRFPNYHFRLRN PIFLHNWSLSSFL  SLFI GR GFVLL
Sbjct: 1   MALTFLYSTTSFSSSSSLTRRFPNYHFRLRNSPIFLHNWSLSSFLNHSLFITGRIGFVLL 60

Query: 61  IPALTLFLIFFSAASAAFHGVLNLCFFELFCSGSIPPSGCFLNVLVCEFLADI 113
           IPALTL  IFF+AASAAFHGVLNL F  L CSGSIPPSG FLNVLVCE LA+I
Sbjct: 61  IPALTLLFIFFAAASAAFHGVLNLGFSGLCCSGSIPPSGYFLNVLVCELLAEI 113

The following BLAST results are available for this feature:
BLAST of IVF0017729 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0017729 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8L22.7e-4286.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046430 PE=4 SV=1[more]
BLAST of IVF0017729 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46065.11.34e-5786.73hypothetical protein Csa_005338 [Cucumis sativus][more]
BLAST of IVF0017729 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0017729.1IVF0017729.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane