IVF0017710 (gene) Melon (IVF77) v1

Overview
NameIVF0017710
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionStress response protein NST1-like
Locationchr04: 10634297 .. 10634515 (-)
RNA-Seq ExpressionIVF0017710
SyntenyIVF0017710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAAGCAAGTTGAGAACTTGGTAGTGGAAAAAAAGGTCGTAGAAAACCAGGAGGTGGACCACCTAGAGATTGTGGCAGCAGAGTTTGAAGAAGAAGTAGCGAATATGAGCCCATTGGAGCCAAGGCTCTCACCTGATAACCTAGGGCTAAGAGTTGCCACCACTAAGAAGACAAAAAAGGCAAAGGCTGAGACATCTAGACCTGAGGATGTTTAA

mRNA sequence

ATGGACAAGCAAGTTGAGAACTTGGTAGTGGAAAAAAAGGTCGTAGAAAACCAGGAGGTGGACCACCTAGAGATTGTGGCAGCAGAGTTTGAAGAAGAAGTAGCGAATATGAGCCCATTGGAGCCAAGGCTCTCACCTGATAACCTAGGGCTAAGAGTTGCCACCACTAAGAAGACAAAAAAGGCAAAGGCTGAGACATCTAGACCTGAGGATGTTTAA

Coding sequence (CDS)

ATGGACAAGCAAGTTGAGAACTTGGTAGTGGAAAAAAAGGTCGTAGAAAACCAGGAGGTGGACCACCTAGAGATTGTGGCAGCAGAGTTTGAAGAAGAAGTAGCGAATATGAGCCCATTGGAGCCAAGGCTCTCACCTGATAACCTAGGGCTAAGAGTTGCCACCACTAAGAAGACAAAAAAGGCAAAGGCTGAGACATCTAGACCTGAGGATGTTTAA

Protein sequence

MDKQVENLVVEKKVVENQEVDHLEIVAAEFEEEVANMSPLEPRLSPDNLGLRVATTKKTKKAKAETSRPEDV
Homology
BLAST of IVF0017710 vs. ExPASy TrEMBL
Match: A0A5D3BAJ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold441G00150 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-27
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0

Query: 1  MDKQVENLVVEKKVVENQEVDHLEIVAAEFEEEVANMSPLEPRLSPDNLGLRVATTKKTK 60
          MDKQVENLVVEKKVVENQEVDHLEIVAAEFEEEVANMSPLEPRLSPDNLGLRVATTKKTK
Sbjct: 1  MDKQVENLVVEKKVVENQEVDHLEIVAAEFEEEVANMSPLEPRLSPDNLGLRVATTKKTK 60

Query: 61 KAKAETSRPED 72
          KAKAETSRPED
Sbjct: 61 KAKAETSRPED 71

BLAST of IVF0017710 vs. ExPASy TrEMBL
Match: A0A5A7TQ54 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00290 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.8e-08
Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = 0

Query: 1   MDKQVENLVVEKKVVENQEVDHLEIVAAEFEEEVANMSPLEPRLSPDNLGLRVATTKKTK 60
           + ++VE+     K  ENQ+VDHLE+VA EF +E+  MSPLEPRLSP+   L+     K K
Sbjct: 73  LSEKVEDQATRYKATENQKVDHLEVVAEEFSKEIERMSPLEPRLSPNEPRLKEVVQPKKK 132

Query: 61  KAKAETSRPED 72
           K+KA TSR ED
Sbjct: 133 KSKAGTSRLED 143

BLAST of IVF0017710 vs. ExPASy TrEMBL
Match: A0A5D3BXJ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold758G00110 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.0e-07
Identity = 35/60 (58.33%), Postives = 40/60 (66.67%), Query Frame = 0

Query: 13  KVVENQEVDHLEIVAAEFEEEVANMSPLEPRLSPDNLGLRVATTKKTKKAKAETSRPEDV 72
           K  E Q VDHLE+VA EF +E+  MSPLEPRL P+  GL  A   K  K KA TSRP+DV
Sbjct: 73  KATETQGVDHLEVVAEEFNKEIERMSPLEPRLKPEEQGLVNAAQLKIDKKKAGTSRPKDV 132

BLAST of IVF0017710 vs. ExPASy TrEMBL
Match: A0A5D3BIL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00600 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.6e-06
Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 0

Query: 5  VENLVVEKKVVENQEVDHLEIVAAEFEEEVANMSPLEPRLSPDNLGLRV 54
          +EN+ V KKV E++EV+HLE+VA EF +E+  MSPLEPRL P+ LGL +
Sbjct: 1  MENVAVRKKVAEHREVNHLEVVAEEFNQEIERMSPLEPRLIPEELGLEL 49

BLAST of IVF0017710 vs. ExPASy TrEMBL
Match: A0A5A7VMZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001080 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.4e-06
Identity = 33/52 (63.46%), Postives = 38/52 (73.08%), Query Frame = 0

Query: 16 ENQEVDHLEIVAAEFEEEVANMSPLEPRLSPDNLGLRVATTKKTKKAKAETS 68
          E QEVDHLE+VA EF +E+ NMS LEPRLSPD  GLR A   K  K+K +TS
Sbjct: 4  EKQEVDHLEVVAEEFTKEIENMSQLEPRLSPDEHGLREAPQPKKIKSKPKTS 55

BLAST of IVF0017710 vs. NCBI nr
Match: KAA0053120.1 (hypothetical protein E6C27_scaffold778G00540 [Cucumis melo var. makuwa] >TYJ95495.1 hypothetical protein E5676_scaffold441G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 130 bits (328), Expect = 2.30e-35
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0

Query: 1  MDKQVENLVVEKKVVENQEVDHLEIVAAEFEEEVANMSPLEPRLSPDNLGLRVATTKKTK 60
          MDKQVENLVVEKKVVENQEVDHLEIVAAEFEEEVANMSPLEPRLSPDNLGLRVATTKKTK
Sbjct: 1  MDKQVENLVVEKKVVENQEVDHLEIVAAEFEEEVANMSPLEPRLSPDNLGLRVATTKKTK 60

Query: 61 KAKAETSRPED 71
          KAKAETSRPED
Sbjct: 61 KAKAETSRPED 71

BLAST of IVF0017710 vs. NCBI nr
Match: KAA0043535.1 (hypothetical protein E6C27_scaffold335G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 65.9 bits (159), Expect = 5.45e-11
Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = 0

Query: 1   MDKQVENLVVEKKVVENQEVDHLEIVAAEFEEEVANMSPLEPRLSPDNLGLRVATTKKTK 60
           + ++VE+     K  ENQ+VDHLE+VA EF +E+  MSPLEPRLSP+   L+     K K
Sbjct: 73  LSEKVEDQATRYKATENQKVDHLEVVAEEFSKEIERMSPLEPRLSPNEPRLKEVVQPKKK 132

Query: 61  KAKAETSRPED 71
           K+KA TSR ED
Sbjct: 133 KSKAGTSRLED 143

BLAST of IVF0017710 vs. NCBI nr
Match: TYK04237.1 (hypothetical protein E5676_scaffold758G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 1.14e-10
Identity = 35/60 (58.33%), Postives = 40/60 (66.67%), Query Frame = 0

Query: 13  KVVENQEVDHLEIVAAEFEEEVANMSPLEPRLSPDNLGLRVATTKKTKKAKAETSRPEDV 72
           K  E Q VDHLE+VA EF +E+  MSPLEPRL P+  GL  A   K  K KA TSRP+DV
Sbjct: 73  KATETQGVDHLEVVAEEFNKEIERMSPLEPRLKPEEQGLVNAAQLKIDKKKAGTSRPKDV 132

BLAST of IVF0017710 vs. NCBI nr
Match: KAA0067936.1 (hypothetical protein E6C27_scaffold138G001080 [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 2.10e-10
Identity = 33/52 (63.46%), Postives = 38/52 (73.08%), Query Frame = 0

Query: 16 ENQEVDHLEIVAAEFEEEVANMSPLEPRLSPDNLGLRVATTKKTKKAKAETS 67
          E QEVDHLE+VA EF +E+ NMS LEPRLSPD  GLR A   K  K+K +TS
Sbjct: 4  EKQEVDHLEVVAEEFTKEIENMSQLEPRLSPDEHGLREAPQPKKIKSKPKTS 55

BLAST of IVF0017710 vs. NCBI nr
Match: KAA0060175.1 (hypothetical protein E6C27_scaffold542G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 59.7 bits (143), Expect = 1.50e-09
Identity = 34/60 (56.67%), Postives = 38/60 (63.33%), Query Frame = 0

Query: 13 KVVENQEVDHLEIVAAEFEEEVANMSPLEPRLSPDNLGLRVATTKKTKKAKAETSRPEDV 72
          K  E Q VDHLE+VA EF +E+  MS LEPRL P+  GL  A   K  K KA TSRP DV
Sbjct: 34 KATETQGVDHLEVVAEEFNKEIERMSHLEPRLKPEEQGLVNAAQLKKDKKKAGTSRPNDV 93

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BAJ21.2e-27100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TQ544.8e-0852.11Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BXJ24.0e-0758.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BIL72.6e-0659.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VMZ43.4e-0663.46Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0053120.12.30e-35100.00hypothetical protein E6C27_scaffold778G00540 [Cucumis melo var. makuwa] >TYJ9549... [more]
KAA0043535.15.45e-1152.11hypothetical protein E6C27_scaffold335G00290 [Cucumis melo var. makuwa][more]
TYK04237.11.14e-1058.33hypothetical protein E5676_scaffold758G00110 [Cucumis melo var. makuwa][more]
KAA0067936.12.10e-1063.46hypothetical protein E6C27_scaffold138G001080 [Cucumis melo var. makuwa][more]
KAA0060175.11.50e-0956.67hypothetical protein E6C27_scaffold542G00500 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..72

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0017710.1IVF0017710.1mRNA