IVF0017663 (gene) Melon (IVF77) v1

Overview
NameIVF0017663
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr02: 22336034 .. 22338333 (+)
RNA-Seq ExpressionIVF0017663
SyntenyIVF0017663
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATGTGGGAAGTATATACAATGCCATCCAACTTCCCCCACTCAGGAATTGGGTCCACCGAACGCGGCTGATTTGTTTGTGTGGGAAGAAGTTTACTTAGGGTTGCAAATTCTTCAGAAAAGGACGGTGGGTTGCCAGAATTTGCTGATACAAATTCTTTCTAATTTTGACCTCTCCACAAAGTGGGTCCAAGTTGAGCTATTCTTCCGGTGTGAAGCACGAAACGGGTCTTCTTCAGGTGAATCTCCCCAATCTCTTCTAAACGGGAACTCAAGAGGTATTGCCGACAATGTAAGTTCTATTTTTTATTTGTTGTACCTCCTTTTGGTCTTGGGGACATGTATGTTGGTTGAGTTGAGGTGGATTGTTTGAGTTTGGGGGGAGGTTCGTCGTTTTCTTCCTTTTTAGTTTGGCTCATTGACCCATTAGGTTTTTGTTTGAATATTTGTTTGCAATGACATGAAAACCTATAAAATTGAAATTAATGCCCAACTCTCAATCCCTATGCGAACTAGAGTCTAATTACCTAAAGAAACACATGCGCATGTAGATTGGCTCTTGCTCTCTCGCTTGTTCTTTCTTTATCTCCCTCGATCTTCTCCTCTCTCCCATCCCTTTTTTCCTCTCACAATCTCGGCTCACGCTCTCGATCACGATCGTCCTCTTCGACTCGCTCGCTCGATCACGATCGTGCTCTTCGGCTCGCTCGCTCGGTGGTGATCGTGCTCTTCGGCTCGCTCGCTCGGTGGTGATCGTGCTCTTCGGCTCGCTCGCTCGGTGGTGATCGTGCTCTTCGGCTCGCTCGCTCGGTGGTGATCGTGCTCTTCGGCTCGCTCGCTCGGTGGTGATCGTGCTCTTCGGCTCGCTCGCTCGGTGGTGATCGTGCTCTTCGGCTCGCTCGCTCGGTGGTGATCGTGCTCTTCGGCTCGCTCGCTCGGTGGTGATCGTGCTCTTCGGCTCGCTCGCTCGGTGGTGATCGTGCTCTTCGGCTCGCTCGCTCGGTGGTGATCGTGCTCTTCGGCTCGCTCGCTCGGTGGTGATCGTGCTCTTCGGCTCGCTCGCTCGGTGGTGATCGTGCTCTTCGGCTCGCTCGCTCGGTGGTGATCGTGCTCTTCGGCTCGCTCGCTCGGTGGTGATCGTGCTCTTCGGCTCGCTCGCTCGGTGGTGATCGTGCTCTTCGGCTCGCTCGCTCGGTGGTGATCGTGCTCTTCGGCTCGCTCGCTCGGTGGGGATCGTGCTCTTCGGCTCGCTCGCTCGGTGGGGATCGTGCTCTTCGGCTCGCTCGCTCGGTGGGGATCGTGCTCTTCGGCTCGCTCGCTCGGTGGGGATCGTGCTCTTCGGCCGGCTCGCTCGCTCGGTGGGGATCGTGCTCTTCGGCCGGCTCGCTCGCTCGGTGGGGATCGTGCTCTTCGGCCGGCTCGCTCGCTCGGTGGGGATCGTGCTCTTCGGCCGGCTCGCTCGCTCGGTGGGGATCGCGCTCTTCGGCCGGCTCGCTCGCTCGGTGGGGATCGCGCTCTTCGGCTCGCTCGCTCGGTGGGGATCGCGCTCTTCGGCTCGGTCGCTCGGTGGGGATCGCGCTCTTCGGCTCGGTCGCTCGGTGGGGATCGCGCTCTTCGGCTCGGTCGGTCGGTGGTGATCGCGCTCTTCGGCTCGCTCGGTCGGTGGTGATCGCGCTCTTCGGCTCGCTCGCTCGGTGGTGATCGCGCTCTTCGGCTCGCTCGCTCGGTGGTGATCGCGCTCTTCGGCTCGCTCGCTCGGTGGTGATCGCGCTCTTCGGCTCGCTCGCTCGGTGGTGATCGCGCTCTTCGGCTCGCTCGCTCGGTGGTGATCGCGCTCTTCGGCTCGCTGCTCGCTCGGTCGCAGTCGCGCTCTTCGGCTCGCTGCTCGCTCGGTCGCAGTCGCGCTCTTCGGCTCTGCTCGCTCGGTCGCAGTCGCGCTCTTCGGCTCGCTCGCTCGGTCGCAGTCGCGCTCTTCGGCTCGCTCGCTCGGTCGCGGTCGCGCTCTTTGGCTCGCTCGCTCGATCACGGTTGTGCTCTTCGGCTCGCTCGTGGGATCACGGTCTCGCTTGTGGGTCACGGTTGCGCTCTTCGGCTCGCTCGTTCGGTCACGGTCGCGCTCTTCGGCTCGCTCGTTCGGTCACGGTCGCGCTCTTCGGCTCGCTCGCTCGTTCACGGTCGCGCTCTTCGGCTCGCTCGCTCGTTCACGTTCGCGCTCTTCGGCTCGCTCGCTCGTTCACGTTCGCGCTCTTCGGCTCGCTCGCTCGGTCACAATTTGAAATTCATGATAAATTAGTCTAA

mRNA sequence

ATGGTATGTGGGAAGTATATACAATGCCATCCAACTTCCCCCACTCAGGAATTGGGTCCACCGAACGCGGCTGATTTGTTTGTGTGGGAAGAAGTTTACTTAGGGTTGCAAATTCTTCAGAAAAGGACGGTGGGTTGCCAGAATTTGCTGATACAAATTCTTTCTAATTTTGACCTCTCCACAAAGTGGGTCCAAGTTGAGCTATTCTTCCGGTGTGAAGCACGAAACGGGTCTTCTTCAGGTGAATCTCCCCAATCTCTTCTAAACGGGAACTCAAGAGGTATTGCCGACAATGTAAGTTCTATTTTTTATTTTCGCGCTCTTCGGCTCGCTCGCTCGGTCGCGGTCGCGCTCTTTGGCTCGCTCGCTCGATCACGGTTGTGCTCTTCGGCTCGCTCGTGGGATCACGGTCTCGCTTGTGGGTCACGGTTGCGCTCTTCGGCTCGCTCGTTCGGTCACGGTCGCGCTCTTCGGCTCGCTCGTTCGGTCACGGTCGCGCTCTTCGGCTCGCTCGCTCGTTCACGGTCGCGCTCTTCGGCTCGCTCGCTCGTTCACGTTCGCGCTCTTCGGCTCGCTCGCTCGTTCACGTTCGCGCTCTTCGGCTCGCTCGCTCGGTCACAATTTGAAATTCATGATAAATTAGTCTAA

Coding sequence (CDS)

ATGGTATGTGGGAAGTATATACAATGCCATCCAACTTCCCCCACTCAGGAATTGGGTCCACCGAACGCGGCTGATTTGTTTGTGTGGGAAGAAGTTTACTTAGGGTTGCAAATTCTTCAGAAAAGGACGGTGGGTTGCCAGAATTTGCTGATACAAATTCTTTCTAATTTTGACCTCTCCACAAAGTGGGTCCAAGTTGAGCTATTCTTCCGGTGTGAAGCACGAAACGGGTCTTCTTCAGGTGAATCTCCCCAATCTCTTCTAAACGGGAACTCAAGAGGTATTGCCGACAATGTAAGTTCTATTTTTTATTTTCGCGCTCTTCGGCTCGCTCGCTCGGTCGCGGTCGCGCTCTTTGGCTCGCTCGCTCGATCACGGTTGTGCTCTTCGGCTCGCTCGTGGGATCACGGTCTCGCTTGTGGGTCACGGTTGCGCTCTTCGGCTCGCTCGTTCGGTCACGGTCGCGCTCTTCGGCTCGCTCGTTCGGTCACGGTCGCGCTCTTCGGCTCGCTCGCTCGTTCACGGTCGCGCTCTTCGGCTCGCTCGCTCGTTCACGTTCGCGCTCTTCGGCTCGCTCGCTCGTTCACGTTCGCGCTCTTCGGCTCGCTCGCTCGGTCACAATTTGAAATTCATGATAAATTAGTCTAA

Protein sequence

MVCGKYIQCHPTSPTQELGPPNAADLFVWEEVYLGLQILQKRTVGCQNLLIQILSNFDLSTKWVQVELFFRCEARNGSSSGESPQSLLNGNSRGIADNVSSIFYFRALRLARSVAVALFGSLARSRLCSSARSWDHGLACGSRLRSSARSFGHGRALRLARSVTVALFGSLARSRSRSSARSLVHVRALRLARSFTFALFGSLARSQFEIHDKLV
Homology
[Close]
BLAST of IVF0017663 vs. ExPASy TrEMBL
Match: A0A4S8K7K4 (Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb08t30290 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 9.5e-04
Identity = 53/110 (48.18%), Postives = 63/110 (57.27%), Query Frame = 0 

Query: 97  DNVSSIFYFRALRLARSVAVALFGSLARSRLCSSARSWDHGLACGSRLRSSARSFGHGRA 156
           + +S++    A  LARS+A +L  SLARS   S ARS    LA  S  RS ARS     A
Sbjct: 138 EGLSTLARSLARSLARSLARSLARSLARSLARSLARSLARSLA-RSLARSLARSLARSLA 197

Query: 157 LRLARSVTVALFGSLARSRSRSSARSLVHVRALRLARSFTFALFGSLARS 207
             LARS+  +L  SLARS +RS ARSL    A  LARS   +L  SLARS
Sbjct: 198 RSLARSLARSLARSLARSLARSLARSLARSLARSLARSLARSLARSLARS 246

[Close]
BLAST of IVF0017663 vs. NCBI nr
Match: EFN78505.1 (hypothetical protein EAI_08550, partial [Harpegnathos saltator])

HSP 1 Score: 53.1 bits (126), Expect = 2.38e-05
Identity = 51/97 (52.58%), Postives = 57/97 (58.76%), Query Frame = 0 

Query: 110 LARSVAVALFGSLARSRLCSSARSWDHGLACGSRLRSSARSFGHGRALRLARSVTVALFG 169
           LARS+A +L  SLARS   S ARS    LA  S  RS ARS     A  LARS+  +L  
Sbjct: 3   LARSLARSLARSLARSLARSLARSLARSLA-RSLARSLARSLARSLARSLARSLARSLAR 62

Query: 170 SLARSRSRSSARSLVHVRALRLARSFTFALFGSLARS 206
           SLARS +RS ARSL    A  LARS   +L  SLARS
Sbjct: 63  SLARSLARSLARSLARSLARSLARSLARSLARSLARS 98

[Close]
BLAST of IVF0017663 vs. NCBI nr
Match: THU70941.1 (hypothetical protein C4D60_Mb08t30290 [Musa balbisiana])

HSP 1 Score: 54.3 bits (129), Expect = 1.37e-04
Identity = 53/110 (48.18%), Postives = 63/110 (57.27%), Query Frame = 0 

Query: 97  DNVSSIFYFRALRLARSVAVALFGSLARSRLCSSARSWDHGLACGSRLRSSARSFGHGRA 156
           + +S++    A  LARS+A +L  SLARS   S ARS    LA  S  RS ARS     A
Sbjct: 138 EGLSTLARSLARSLARSLARSLARSLARSLARSLARSLARSLA-RSLARSLARSLARSLA 197

Query: 157 LRLARSVTVALFGSLARSRSRSSARSLVHVRALRLARSFTFALFGSLARS 206
             LARS+  +L  SLARS +RS ARSL    A  LARS   +L  SLARS
Sbjct: 198 RSLARSLARSLARSLARSLARSLARSLARSLARSLARSLARSLARSLARS 246

The following BLAST results are available for this feature:
BLAST of IVF0017663 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0017663 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A4S8K7K49.5e-0448.18Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb08t30290 PE=3 SV=... [more]
BLAST of IVF0017663 vs. NCBI nr
Match NameE-valueIdentityDescription
EFN78505.12.38e-0552.58hypothetical protein EAI_08550, partial [Harpegnathos saltator][more]
THU70941.11.37e-0448.18hypothetical protein C4D60_Mb08t30290 [Musa balbisiana][more]
BLAST of IVF0017663 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0017663.1IVF0017663.1mRNA