IVF0017657 (gene) Melon (IVF77) v1

Overview
NameIVF0017657
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMitochondrial import inner membrane translocase
Locationchr08: 6051952 .. 6054338 (+)
RNA-Seq ExpressionIVF0017657
SyntenyIVF0017657
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCCGAAGACGAGAATCGGAATTCCGGTTTCCAAATGCGTTAATATATCAATGGAGGAAGACATCGTCCTTCTTCTTTGTTACCAGCGACGGAGCTCAGCCATGAAAGACGACTACGAGGTATGCGATTTTCTCTCTTTTAAGCCTCGAATTTCAACAACGCATATGTATCAACTCCCTCCCTCGCAGTTGTAGCTATCAATTATGCGATCTTGCGCTAAAATCTAGTTGCTCAAGTCATCCCCTCCCTCTCCTGTTCGATTACATAGTTGCAATCATGTTAAGGATATTTTCATGGTTGGATTAGATATATCAACTTTGTTCTATAACATTCACTGACTGTTGGAGTTTATGCTATCGAGAATTTGGTGGATTTGATATTTGGATTAAAACTTAAAGCCTGAGCTGGTAGATTAGTTATATATGTTGAACCTTTTTCAGTTTTCCTGAGGACTTGATACAAGTCGATATTCTTTATTTCCTTTTTCAAAACTCGGAATGAAATGGTCATGTCCTTGCTAAAGAAATCGTGAATTACTGTTTTTCTATAGAAGTTTTCGTGTCTTTGGATTGGTGATCATGAGAAACCATATCTAGTTCATGTAATGGTGACTAATTGGGTTAGGAAATAGCATATGATGTTTTCCTTTTGAATTTATTTCACTTCAAAAAGTTCTTTTCTGATTCCTCATACATGTAAATTGCATTTACTAGTTTGATTCCACGTCGATGTCTACTTTGTGTATTGTATTTCCTTATTTTGCTAACTTGATTCCCCATGGATACTTTGTGTACTTGTAGTTTCTTGTTTTGCTACTTTGATTTTGCCTGTATTTGTCATGCTTGCTAGTTTCTATTTTTGCATCAAGATTCGCCATTCCTTTTTCTGCCTCCAAATTCTTGAAATCCTGTTCGTGCACAGAGGGCATAGTAAGATTTAAGTTTTTTAGGATGCAGTACGTCATGAATCAAAAGGCGAGATAAATCTATATCTTGTTTTGGACCCATCAGCATCAACCTTTCAGCCATAAGAACAGGATTCACCTTACGGGCAGTAGGTCCCTGGTGTTATGTCTAAGATTGTTTCCAGTCCTAACTGAAGTGTTCATGTGCCATCATGAGTTTTAGATAGGTTTCCTTGCCATCCATGTTTTCTACTTTTTGTGATGTCATTCTGATTATCAAGATGATAATGTGCAGACCGAAGAGAAAAAGCAAGCTGCTGCTGATGTAATGTTTCAATATTCAAAATTTGTGATGGCCTGTATTGGTAATCAAGTAAGACCATGTGACTTGAGATTTCACTTGATGAAGGTAATAGTTTTTTCCTTGGATTTCTCATCTATAATTGTAGAAATCGTTTTCTTTTGATTGAGTTTATCTAAAATAGTATATGATGGAATAACTTTAATATTTCCAATTGCTTCTGTTAAATCACCGATTTGTGATTCAACATGGTATTAGAGTAGGAGATCATGTATTCAAACTGTCCTTCCTCTTCAATTATTATTGACTTCCACTTGTGTGATATTTTGTTAGAGCGATGATATGAGATTAAATTTATCTTCACCTATTAGCTTAAGTTTTGGAATCAATCGGTGATTTAACATGGTATAGAGTAGAAGGTTTTGTATTCAAACTCTCATAATGTAATGTCTTCCTTCCTGATTAATATTGATTTCTACTTGTTCCGTCTTCTATAAATCTTCAAGCCTAAAAGTGAGGGGGAGTATTGTTATAGTATTGATATAACTAAATCCTATATAACCAATCAACTTAAACACCTCGGTTACTTGATGATTCAACAGTGTTTATATGTAATTGTGAATAACAGTCATTTTTATCAAAAGCTGCGCACTCGCTCACTTTGTTATCCCCTAATTCCTTTGCACTTAAACATATATATTTTTATCTCATAAGAACTATAGGACTTAAACATTCCAATCAATCACCACCTACGTAGATTCATGGGAATCTTCTCTTTTACACCTGTTAACAAATCAAAATATAAAAGATCATGGTTGTTATTTCTTCTTTCTACGTGTTCAGGAGATTTCTGGAATTCCAACTTCTTTAAAGAGGGAGTCATCCCAACGAGCAGCTTCTCCGGATGCCATGGGCGAATCGTCGAGCTCAGGTACAGCTAGACTTGATAAAGTAGATAGCTTTAGAGTGCTGTAGAGTTCGACGACTCCAAATTGAAGGCCTTCACTACATATGGGATTTACCTGCCTTGTCCTTGTCTAACCTTTTCTCTTATTTTAACTTTCATTGTTTGAAATTATGTTTGCTCTTTACCAAAAGATGGAAACTTTCACTATTTACATGTATTATTTCCTTGTAAGTTTTTGTATGACGAATATGAGTGCATTGGTAAAATTATGATGG

mRNA sequence

CCCCGAAGACGAGAATCGGAATTCCGGTTTCCAAATGCGTTAATATATCAATGGAGGAAGACATCGTCCTTCTTCTTTGTTACCAGCGACGGAGCTCAGCCATGAAAGACGACTACGAGACCGAAGAGAAAAAGCAAGCTGCTGCTGATGTAATGTTTCAATATTCAAAATTTGTGATGGCCTGTATTGGTAATCAAGTAAGACCATGTGACTTGAGATTTCACTTGATGAAGGAGATTTCTGGAATTCCAACTTCTTTAAAGAGGGAGTCATCCCAACGAGCAGCTTCTCCGGATGCCATGGGCGAATCGTCGAGCTCAGGTACAGCTAGACTTGATAAAGTAGATAGCTTTAGAGTGCTGTAGAGTTCGACGACTCCAAATTGAAGGCCTTCACTACATATGGGATTTACCTGCCTTGTCCTTGTCTAACCTTTTCTCTTATTTTAACTTTCATTGTTTGAAATTATGTTTGCTCTTTACCAAAAGATGGAAACTTTCACTATTTACATGTATTATTTCCTTGTAAGTTTTTGTATGACGAATATGAGTGCATTGGTAAAATTATGATGG

Coding sequence (CDS)

ATGGAGGAAGACATCGTCCTTCTTCTTTGTTACCAGCGACGGAGCTCAGCCATGAAAGACGACTACGAGACCGAAGAGAAAAAGCAAGCTGCTGCTGATGTAATGTTTCAATATTCAAAATTTGTGATGGCCTGTATTGGTAATCAAGTAAGACCATGTGACTTGAGATTTCACTTGATGAAGGAGATTTCTGGAATTCCAACTTCTTTAAAGAGGGAGTCATCCCAACGAGCAGCTTCTCCGGATGCCATGGGCGAATCGTCGAGCTCAGGTACAGCTAGACTTGATAAAGTAGATAGCTTTAGAGTGCTGTAG

Protein sequence

MEEDIVLLLCYQRRSSAMKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQRAASPDAMGESSSSGTARLDKVDSFRVL
Homology
[Close]
BLAST of IVF0017657 vs. ExPASy TrEMBL
Match: A0A5A7SN38 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001150 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.0e-39
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 18  MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR 77
           MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR
Sbjct: 1   MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR 60

Query: 78  AASPDAMGESSSSGTARLDKVDSFRVL 105
           AASPDAMGESSSSGTARLDKVDSFRVL
Sbjct: 61  AASPDAMGESSSSGTARLDKVDSFRVL 87

[Close]
BLAST of IVF0017657 vs. ExPASy TrEMBL
Match: A0A1S3B238 (uncharacterized protein LOC103485143 OS=Cucumis melo OX=3656 GN=LOC103485143 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.0e-39
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 18  MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR 77
           MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR
Sbjct: 1   MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR 60

Query: 78  AASPDAMGESSSSGTARLDKVDSFRVL 105
           AASPDAMGESSSSGTARLDKVDSFRVL
Sbjct: 61  AASPDAMGESSSSGTARLDKVDSFRVL 87

[Close]
BLAST of IVF0017657 vs. ExPASy TrEMBL
Match: A0A0A0KHB0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507080 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.4e-39
Identity = 86/87 (98.85%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 18  MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR 77
           MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISG+PTSLKRESSQR
Sbjct: 1   MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGMPTSLKRESSQR 60

Query: 78  AASPDAMGESSSSGTARLDKVDSFRVL 105
           AASPDAMGESSSSGTARLDKVDSFRVL
Sbjct: 61  AASPDAMGESSSSGTARLDKVDSFRVL 87

[Close]
BLAST of IVF0017657 vs. ExPASy TrEMBL
Match: A0A6J1KP11 (uncharacterized protein LOC111497388 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111497388 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.3e-38
Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 18  MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR 77
           MKDDYET+EKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR
Sbjct: 1   MKDDYETDEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR 60

Query: 78  AASPDAMGESSSSGTARLDKVDSFRVL 105
           AASPDAMGESSSSGTARLDKVDSFR L
Sbjct: 61  AASPDAMGESSSSGTARLDKVDSFRAL 87

[Close]
BLAST of IVF0017657 vs. ExPASy TrEMBL
Match: A0A6J1EEQ3 (uncharacterized protein LOC111433498 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433498 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.3e-38
Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 18  MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR 77
           MKDDYET+EKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR
Sbjct: 1   MKDDYETDEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR 60

Query: 78  AASPDAMGESSSSGTARLDKVDSFRVL 105
           AASPDAMGESSSSGTARLDKVDSFR L
Sbjct: 61  AASPDAMGESSSSGTARLDKVDSFRAL 87

[Close]
BLAST of IVF0017657 vs. NCBI nr
Match: XP_008440839.1 (PREDICTED: uncharacterized protein LOC103485143 [Cucumis melo] >KAA0025661.1 uncharacterized protein E6C27_scaffold253G001540 [Cucumis melo var. makuwa] >TYK12534.1 uncharacterized protein E5676_scaffold255G001150 [Cucumis melo var. makuwa])

HSP 1 Score: 172 bits (436), Expect = 1.10e-53
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 18  MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR 77
           MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR
Sbjct: 1   MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR 60

Query: 78  AASPDAMGESSSSGTARLDKVDSFRVL 104
           AASPDAMGESSSSGTARLDKVDSFRVL
Sbjct: 61  AASPDAMGESSSSGTARLDKVDSFRVL 87

[Close]
BLAST of IVF0017657 vs. NCBI nr
Match: XP_004134854.1 (uncharacterized protein LOC101220806 [Cucumis sativus])

HSP 1 Score: 171 bits (433), Expect = 3.14e-53
Identity = 86/87 (98.85%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 18  MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR 77
           MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISG+PTSLKRESSQR
Sbjct: 1   MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGMPTSLKRESSQR 60

Query: 78  AASPDAMGESSSSGTARLDKVDSFRVL 104
           AASPDAMGESSSSGTARLDKVDSFRVL
Sbjct: 61  AASPDAMGESSSSGTARLDKVDSFRVL 87

[Close]
BLAST of IVF0017657 vs. NCBI nr
Match: XP_038882825.1 (uncharacterized protein LOC120073967 [Benincasa hispida])

HSP 1 Score: 171 bits (432), Expect = 4.46e-53
Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 18  MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR 77
           MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR
Sbjct: 1   MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR 60

Query: 78  AASPDAMGESSSSGTARLDKVDSFRVL 104
           AASPDAMGESSSSGTARLDKVDSFR L
Sbjct: 61  AASPDAMGESSSSGTARLDKVDSFRAL 87

[Close]
BLAST of IVF0017657 vs. NCBI nr
Match: XP_022926304.1 (uncharacterized protein LOC111433498 isoform X2 [Cucurbita moschata] >XP_023003947.1 uncharacterized protein LOC111497388 isoform X3 [Cucurbita maxima] >XP_023517285.1 uncharacterized protein LOC111781091 isoform X3 [Cucurbita pepo subsp. pepo] >KAG7026730.1 hypothetical protein SDJN02_10735 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 169 bits (429), Expect = 1.28e-52
Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 18  MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR 77
           MKDDYET+EKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR
Sbjct: 1   MKDDYETDEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR 60

Query: 78  AASPDAMGESSSSGTARLDKVDSFRVL 104
           AASPDAMGESSSSGTARLDKVDSFR L
Sbjct: 61  AASPDAMGESSSSGTARLDKVDSFRAL 87

[Close]
BLAST of IVF0017657 vs. NCBI nr
Match: XP_022132812.1 (uncharacterized protein LOC111005574 [Momordica charantia])

HSP 1 Score: 169 bits (427), Expect = 2.59e-52
Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 18  MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR 77
           MKDDYETEEKKQAAADV+FQYSKFVMACIGNQVRPCDLRFHLMKEISG+PTSLKRESSQR
Sbjct: 1   MKDDYETEEKKQAAADVLFQYSKFVMACIGNQVRPCDLRFHLMKEISGLPTSLKRESSQR 60

Query: 78  AASPDAMGESSSSGTARLDKVDSFRVL 104
           AASPDAMGESSSSGTARLDKVDSFR L
Sbjct: 61  AASPDAMGESSSSGTARLDKVDSFRAL 87

[Close]
BLAST of IVF0017657 vs. TAIR 10
Match: AT4G35980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 131.0 bits (328), Expect = 5.7e-31
Identity = 64/87 (73.56%), Postives = 72/87 (82.76%), Query Frame = 0 

Query: 18  MKDDYETEEKKQAAADVMFQYSKFVMACIGNQVRPCDLRFHLMKEISGIPTSLKRESSQR 77
           M ++YE +E+KQAAADV+F YSKF MACIGN  RP D+R HLMKEISG+PTSLK   S R
Sbjct: 1   MTEEYEVDEQKQAAADVLFSYSKFAMACIGNHTRPTDMRLHLMKEISGMPTSLKGRDSSR 60

Query: 78  AASPDAMGESSSSGTARLDKVDSFRVL 105
           AASPD +GESSSSGTARLDK DSFR L
Sbjct: 61  AASPDPLGESSSSGTARLDKTDSFRAL 87

The following BLAST results are available for this feature:
BLAST of IVF0017657 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0017657 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SN382.0e-39100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B2382.0e-39100.00uncharacterized protein LOC103485143 OS=Cucumis melo OX=3656 GN=LOC103485143 PE=... [more]
A0A0A0KHB04.4e-3998.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507080 PE=4 SV=1[more]
A0A6J1KP111.3e-3897.70uncharacterized protein LOC111497388 isoform X3 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1EEQ31.3e-3897.70uncharacterized protein LOC111433498 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
BLAST of IVF0017657 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008440839.11.10e-53100.00PREDICTED: uncharacterized protein LOC103485143 [Cucumis melo] >KAA0025661.1 unc... [more]
XP_004134854.13.14e-5398.85uncharacterized protein LOC101220806 [Cucumis sativus][more]
XP_038882825.14.46e-5398.85uncharacterized protein LOC120073967 [Benincasa hispida][more]
XP_022926304.11.28e-5297.70uncharacterized protein LOC111433498 isoform X2 [Cucurbita moschata] >XP_0230039... [more]
XP_022132812.12.59e-5296.55uncharacterized protein LOC111005574 [Momordica charantia][more]
BLAST of IVF0017657 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G35980.15.7e-3173.56unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..95
NoneNo IPR availablePANTHERPTHR48210FAMILY NOT NAMEDcoord: 18..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0017657.1IVF0017657.1mRNA