IVF0017593 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGCTTTTGTCTTTACCATTTTGTTTCCCCAAAAGGAGGCAGTAATGGCAGAAATAATATCTCATTTTGTTTGAATGAAGTTGAATAATATTGCGGAAACAAACCCAATATCGGCGTCCATTTGATCAGCACATAATAAGAGGTACATTTGGCTCAACCTGTTCTGTTTTCTTAATTTGTTTTTTCTGTGTGTTCCTCTCTCAAAACTCAAAGGGGAGTATATGTTAATTTGAATTCCTGTTTATAAAATCATACTTAAGTTGGATCTTAATTAAGGGTTAATTAGATCCTAGATTAGCGATGATGAAGTTAATTGTAATATGCAAGTCCTCTTCATTTCTGCCTTCGTTTTGGGGTCAACCCTCAAAACACACATACACATGGACACCATCAATTCATTCATATGCATATTTGCATATGTGTGTCAGTTGTTTTTCACATTATCATTGACCAACTATATTAATTTATCGACAGATTTGAGGTGTAATAAATATGAAAAAAAGAAAAAAAGAAAGACTTGCAGTAAGTAAAATATTAAAAAAAATTACCAAACTACTAATTTGGTTTTCCATACCTTTGATTTTAGTTCGTTTACTGGTATAATAGTTTGTTTTTAACTTCGATTTACTTTGGCCATACTTTTAAAATATATTCAATTTGCGAGTAATGGATCAAAATGAATCAAAGTTGAAAATATCGAAACTGAAATAGTCATTTAAAACTATTATTTGATTGGAAAGGTTTTTGACCCCTTCTAATTGATTATATGTATATATACAGGGGATAGATATTGGAATTGAAATAGGGAGGGAGAGAGGAGAGATGAACATGGGGGAAGAAATTCAGGTGAACTGGGAGGTGGAAAATCAGGGAAGATGAGGCTAAAGAAGCTAAGAACAAGGGACGACATGTCGAGAATAATGGTAGAAGAAGAAGATTACCACACAGGATTGTCAGCTTCAGTTCCATTCAAATGGGAGTCAGAGCCAGGAACTCCAAAGGCTAATTTGCATGATAACAATAATGGATCTCTTCTTTCTCCTCTCACTCCCCCACCTTCCTATTTCTCCAATCATCTTATCATTAACTCATCTCCTATCATCCATCTTTCTTCTAAGCCTTCTTTTAATAAGCCAAGTTGCCTTAACACTGTCTTCAGAATGCTTTCTGTGAAGCCCACTCTCCAGCCTCCCTCCCCTGCTTCTTCCTCCTCCTCGAGTCCTACCATGGAAAGACGGAGATCCGGAAGTCCTAGGAGATTGTCGTTTGATTCGAGAGTGGACGACGACGACGAGGATGACGAAAATGAAGACGGCAATGTAGAATCACCTGTTTCTACTTTGTTCTTTGGACGTGGAAGTGAAAAAGGATGCTACCCAAATTTGGTCAAGGTATTCACTAGACATTCTAAATGAAATTAAACAGAGTTTATTATGTATTGAGAAGAGGGC TGGCTTTTGTCTTTACCATTTTGTTTCCCCAAAAGGAGGCAGTAATGGCAGAAATAATATCTCATTTTGTTTGAATGAAGTTGAATAATATTGCGGAAACAAACCCAATATCGGCGTCCATTTGATCAGCACATAATAAGAGGGGATAGATATTGGAATTGAAATAGGGAGGGAGAGAGGAGAGATGAACATGGGGGAAGAAATTCAGGTGAACTGGGAGGTGGAAAATCAGGGAAGATGAGGCTAAAGAAGCTAAGAACAAGGGACGACATGTCGAGAATAATGGTAGAAGAAGAAGATTACCACACAGGATTGTCAGCTTCAGTTCCATTCAAATGGGAGTCAGAGCCAGGAACTCCAAAGGCTAATTTGCATGATAACAATAATGGATCTCTTCTTTCTCCTCTCACTCCCCCACCTTCCTATTTCTCCAATCATCTTATCATTAACTCATCTCCTATCATCCATCTTTCTTCTAAGCCTTCTTTTAATAAGCCAAGTTGCCTTAACACTGTCTTCAGAATGCTTTCTGTGAAGCCCACTCTCCAGCCTCCCTCCCCTGCTTCTTCCTCCTCCTCGAGTCCTACCATGGAAAGACGGAGATCCGGAAGTCCTAGGAGATTGTCGTTTGATTCGAGAGTGGACGACGACGACGAGGATGACGAAAATGAAGACGGCAATGTAGAATCACCTGTTTCTACTTTGTTCTTTGGACGTGGAAGTGAAAAAGGATGCTACCCAAATTTGGTCAAGGTATTCACTAGACATTCTAAATGAAATTAAACAGAGTTTATTATGTATTGAGAAGAGGGC ATGAGGCTAAAGAAGCTAAGAACAAGGGACGACATGTCGAGAATAATGGTAGAAGAAGAAGATTACCACACAGGATTGTCAGCTTCAGTTCCATTCAAATGGGAGTCAGAGCCAGGAACTCCAAAGGCTAATTTGCATGATAACAATAATGGATCTCTTCTTTCTCCTCTCACTCCCCCACCTTCCTATTTCTCCAATCATCTTATCATTAACTCATCTCCTATCATCCATCTTTCTTCTAAGCCTTCTTTTAATAAGCCAAGTTGCCTTAACACTGTCTTCAGAATGCTTTCTGTGAAGCCCACTCTCCAGCCTCCCTCCCCTGCTTCTTCCTCCTCCTCGAGTCCTACCATGGAAAGACGGAGATCCGGAAGTCCTAGGAGATTGTCGTTTGATTCGAGAGTGGACGACGACGACGAGGATGACGAAAATGAAGACGGCAATGTAGAATCACCTGTTTCTACTTTGTTCTTTGGACGTGGAAGTGAAAAAGGATGCTACCCAAATTTGGTCAAGGTATTCACTAGACATTCTAAATGA MRLKKLRTRDDMSRIMVEEEDYHTGLSASVPFKWESEPGTPKANLHDNNNGSLLSPLTPPPSYFSNHLIINSSPIIHLSSKPSFNKPSCLNTVFRMLSVKPTLQPPSPASSSSSSPTMERRRSGSPRRLSFDSRVDDDDEDDENEDGNVESPVSTLFFGRGSEKGCYPNLVKVFTRHSK Homology
BLAST of IVF0017593 vs. ExPASy TrEMBL
Match: A0A5D3BF70 (NADPH oxidase activator OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00550 PE=4 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 1.3e-94 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of IVF0017593 vs. ExPASy TrEMBL
Match: A0A1S3C5A7 (uncharacterized protein At4g00950 OS=Cucumis melo OX=3656 GN=LOC103497034 PE=4 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 1.3e-94 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of IVF0017593 vs. ExPASy TrEMBL
Match: A0A0A0LYC9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533640 PE=4 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 2.9e-78 Identity = 159/180 (88.33%), Postives = 167/180 (92.78%), Query Frame = 0
BLAST of IVF0017593 vs. ExPASy TrEMBL
Match: A0A6J1HLP7 (uncharacterized protein LOC111464733 OS=Cucurbita moschata OX=3662 GN=LOC111464733 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 2.0e-47 Identity = 115/181 (63.54%), Postives = 136/181 (75.14%), Query Frame = 0
BLAST of IVF0017593 vs. ExPASy TrEMBL
Match: A0A6J1I3P2 (uncharacterized protein LOC111469381 OS=Cucurbita maxima OX=3661 GN=LOC111469381 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 2.6e-47 Identity = 118/182 (64.84%), Postives = 139/182 (76.37%), Query Frame = 0
BLAST of IVF0017593 vs. NCBI nr
Match: XP_008457312.1 (PREDICTED: uncharacterized protein At4g00950 [Cucumis melo] >KAA0060003.1 NADPH oxidase activator [Cucumis melo var. makuwa] >TYJ97261.1 NADPH oxidase activator [Cucumis melo var. makuwa]) HSP 1 Score: 354 bits (909), Expect = 6.88e-123 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of IVF0017593 vs. NCBI nr
Match: XP_004145232.1 (uncharacterized protein LOC101203250 [Cucumis sativus] >KGN65857.1 hypothetical protein Csa_023180 [Cucumis sativus]) HSP 1 Score: 300 bits (769), Expect = 1.50e-101 Identity = 159/180 (88.33%), Postives = 167/180 (92.78%), Query Frame = 0
BLAST of IVF0017593 vs. NCBI nr
Match: XP_038894794.1 (uncharacterized protein LOC120083212 [Benincasa hispida] >XP_038894795.1 uncharacterized protein LOC120083212 [Benincasa hispida]) HSP 1 Score: 257 bits (656), Expect = 2.04e-84 Identity = 141/183 (77.05%), Postives = 153/183 (83.61%), Query Frame = 0
BLAST of IVF0017593 vs. NCBI nr
Match: XP_023519368.1 (uncharacterized protein LOC111782803 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 198 bits (503), Expect = 1.90e-61 Identity = 119/181 (65.75%), Postives = 137/181 (75.69%), Query Frame = 0
BLAST of IVF0017593 vs. NCBI nr
Match: XP_022964745.1 (uncharacterized protein LOC111464733 [Cucurbita moschata]) HSP 1 Score: 197 bits (501), Expect = 3.83e-61 Identity = 115/181 (63.54%), Postives = 136/181 (75.14%), Query Frame = 0
BLAST of IVF0017593 vs. TAIR 10
Match: AT1G06930.1 (unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi - 125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800 (source: NCBI BLink). ) HSP 1 Score: 72.4 bits (176), Expect = 4.2e-13 Identity = 67/170 (39.41%), Postives = 83/170 (48.82%), Query Frame = 0
BLAST of IVF0017593 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). ) HSP 1 Score: 53.1 bits (126), Expect = 2.6e-07 Identity = 56/156 (35.90%), Postives = 77/156 (49.36%), Query Frame = 0
BLAST of IVF0017593 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.1 bits (126), Expect = 2.6e-07 Identity = 24/44 (54.55%), Postives = 31/44 (70.45%), Query Frame = 0
BLAST of IVF0017593 vs. TAIR 10
Match: AT3G56260.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40475.1). ) HSP 1 Score: 51.2 bits (121), Expect = 9.9e-07 Identity = 55/172 (31.98%), Postives = 79/172 (45.93%), Query Frame = 0
BLAST of IVF0017593 vs. TAIR 10
Match: AT4G00950.1 (Protein of unknown function (DUF688) ) HSP 1 Score: 42.4 bits (98), Expect = 4.6e-04 Identity = 42/125 (33.60%), Postives = 57/125 (45.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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