
IVF0017581 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTAATTTTAGAATATGGATGCATTTTGTGCTTATACTTCTTCATCCTCTTCCTCTTCTTCCAGCTTCTTGGCTAAAAAAAATGACCAATCTGAGCATCAAATTGTGAAGAGGGAATTTTCGACTTATTCTAATAATAATAACAATATTCATTGTGTTCGGAAGCCGATGGCGAAGCCGTGGAAGAAGCCGGCGATTGCACCACTGCCACCCACTCGGCCCAGGGTTTACAAAGTCGACCCAATTAACTTCCGGGGTTTGGTTCAGAAGCTTACCGGCTTGGCCGAGCTCCGATCTCCACGGCTCCAAAAAATGGCGCCACCACCGCTTGATATTTCCCGGCGCCAAGACGCTTGCTCTGCCGCCGTGGAAGACACGGTGTTTAAGGCTTCGCCGCTTTTGAAGGTGGAGAATGAGGCGGTGGACGGTGGCGGCTTTCTTGAGCTCAATTTGTCGCCCTTCAACAAGAATTGGTGCTCTTTCCCTGCTTTGAGCCCGGAGACTCTGGCCATTTTGGATGCAATTTAGATTATATTTTATTATATATCTATTTTTTTTGTTGGATGATGAGGG TTTAATTTTAGAATATGGATGCATTTTGTGCTTATACTTCTTCATCCTCTTCCTCTTCTTCCAGCTTCTTGGCTAAAAAAAATGACCAATCTGAGCATCAAATTGTGAAGAGGGAATTTTCGACTTATTCTAATAATAATAACAATATTCATTGTGTTCGGAAGCCGATGGCGAAGCCGTGGAAGAAGCCGGCGATTGCACCACTGCCACCCACTCGGCCCAGGGTTTACAAAGTCGACCCAATTAACTTCCGGGGTTTGGTTCAGAAGCTTACCGGCTTGGCCGAGCTCCGATCTCCACGGCTCCAAAAAATGGCGCCACCACCGCTTGATATTTCCCGGCGCCAAGACGCTTGCTCTGCCGCCGTGGAAGACACGGTGTTTAAGGCTTCGCCGCTTTTGAAGGTGGAGAATGAGGCGGTGGACGGTGGCGGCTTTCTTGAGCTCAATTTGTCGCCCTTCAACAAGAATTGGTGCTCTTTCCCTGCTTTGAGCCCGGAGACTCTGGCCATTTTGGATGCAATTTAGATTATATTTTATTATATATCTATTTTTTTTGTTGGATGATGAGGG ATGGATGCATTTTGTGCTTATACTTCTTCATCCTCTTCCTCTTCTTCCAGCTTCTTGGCTAAAAAAAATGACCAATCTGAGCATCAAATTGTGAAGAGGGAATTTTCGACTTATTCTAATAATAATAACAATATTCATTGTGTTCGGAAGCCGATGGCGAAGCCGTGGAAGAAGCCGGCGATTGCACCACTGCCACCCACTCGGCCCAGGGTTTACAAAGTCGACCCAATTAACTTCCGGGGTTTGGTTCAGAAGCTTACCGGCTTGGCCGAGCTCCGATCTCCACGGCTCCAAAAAATGGCGCCACCACCGCTTGATATTTCCCGGCGCCAAGACGCTTGCTCTGCCGCCGTGGAAGACACGGTGTTTAAGGCTTCGCCGCTTTTGAAGGTGGAGAATGAGGCGGTGGACGGTGGCGGCTTTCTTGAGCTCAATTTGTCGCCCTTCAACAAGAATTGGTGCTCTTTCCCTGCTTTGAGCCCGGAGACTCTGGCCATTTTGGATGCAATTTAG MDAFCAYTSSSSSSSSSFLAKKNDQSEHQIVKREFSTYSNNNNNIHCVRKPMAKPWKKPAIAPLPPTRPRVYKVDPINFRGLVQKLTGLAELRSPRLQKMAPPPLDISRRQDACSAAVEDTVFKASPLLKVENEAVDGGGFLELNLSPFNKNWCSFPALSPETLAILDAI Homology
BLAST of IVF0017581 vs. ExPASy Swiss-Prot
Match: Q9SZG3 (VQ motif-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=VQ29 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 7.0e-07 Identity = 30/69 (43.48%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of IVF0017581 vs. ExPASy TrEMBL
Match: A0A1S3B142 (uncharacterized protein LOC103484869 OS=Cucumis melo OX=3656 GN=LOC103484869 PE=4 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 4.0e-90 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
BLAST of IVF0017581 vs. ExPASy TrEMBL
Match: A0A0A0KJR2 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G495810 PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 9.6e-84 Identity = 162/170 (95.29%), Postives = 164/170 (96.47%), Query Frame = 0
BLAST of IVF0017581 vs. ExPASy TrEMBL
Match: A0A6J1GE45 (uncharacterized protein LOC111453330 OS=Cucurbita moschata OX=3662 GN=LOC111453330 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 1.2e-62 Identity = 132/170 (77.65%), Postives = 146/170 (85.88%), Query Frame = 0
BLAST of IVF0017581 vs. ExPASy TrEMBL
Match: A0A6J1IPH4 (uncharacterized protein LOC111477640 OS=Cucurbita maxima OX=3661 GN=LOC111477640 PE=4 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 4.5e-57 Identity = 124/170 (72.94%), Postives = 137/170 (80.59%), Query Frame = 0
BLAST of IVF0017581 vs. ExPASy TrEMBL
Match: A0A6J1HHA9 (uncharacterized protein LOC111463479 OS=Cucurbita moschata OX=3662 GN=LOC111463479 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 2.0e-52 Identity = 119/170 (70.00%), Postives = 138/170 (81.18%), Query Frame = 0
BLAST of IVF0017581 vs. NCBI nr
Match: XP_008440419.1 (PREDICTED: uncharacterized protein LOC103484869 [Cucumis melo]) HSP 1 Score: 340 bits (873), Expect = 5.68e-118 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
BLAST of IVF0017581 vs. NCBI nr
Match: XP_011657908.1 (uncharacterized protein LOC105435910 [Cucumis sativus]) HSP 1 Score: 320 bits (819), Expect = 9.10e-110 Identity = 162/170 (95.29%), Postives = 164/170 (96.47%), Query Frame = 0
BLAST of IVF0017581 vs. NCBI nr
Match: XP_038883814.1 (uncharacterized protein LOC120074676 [Benincasa hispida]) HSP 1 Score: 301 bits (770), Expect = 2.98e-102 Identity = 150/171 (87.72%), Postives = 163/171 (95.32%), Query Frame = 0
BLAST of IVF0017581 vs. NCBI nr
Match: KAG6604115.1 (VQ motif-containing protein 29, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 252 bits (644), Expect = 3.99e-83 Identity = 133/170 (78.24%), Postives = 147/170 (86.47%), Query Frame = 0
BLAST of IVF0017581 vs. NCBI nr
Match: XP_022950153.1 (uncharacterized protein LOC111453330 [Cucurbita moschata] >KAG7034278.1 VQ motif-containing protein 29, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 249 bits (636), Expect = 6.60e-82 Identity = 132/170 (77.65%), Postives = 146/170 (85.88%), Query Frame = 0
BLAST of IVF0017581 vs. TAIR 10
Match: AT2G22880.1 (VQ motif-containing protein ) HSP 1 Score: 59.7 bits (143), Expect = 2.6e-09 Identity = 34/88 (38.64%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of IVF0017581 vs. TAIR 10
Match: AT4G37710.1 (VQ motif-containing protein ) HSP 1 Score: 55.5 bits (132), Expect = 5.0e-08 Identity = 30/69 (43.48%), Postives = 45/69 (65.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|