
IVF0017570 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAACCCATCGTACCGCCAACTTCCTCCTCATCCACCAACCAAACGATGAATTTCTCCACCATTGAGCAATATTCCAATCCCTACTTCCTACACCATTCAGAGACCATGAGCATCGTCCTCGTATCCAACCTCCTCACCGAAACGAACTACACCTCCTGGAGCCAAGCAATGAAAATCGGTTTAACCGTGAAGAACAAACTCGGTTTCATCGATTACAGCATCACACGTCCTACCGGTGAACTCCTCCAATCATGGATTCTCTGTAACAGTGTAGTCACGACTTGGATATTAAATTCACTATCAAAAGAAATTTTTGCCAGCGTCAATTTCTCTGATTCAACACACGAAATATAA ATGGCAGAACCCATCGTACCGCCAACTTCCTCCTCATCCACCAACCAAACGATGAATTTCTCCACCATTGAGCAATATTCCAATCCCTACTTCCTACACCATTCAGAGACCATGAGCATCGTCCTCGTATCCAACCTCCTCACCGAAACGAACTACACCTCCTGGAGCCAAGCAATGAAAATCGGTTTAACCGTGAAGAACAAACTCGGTTTCATCGATTACAGCATCACACGTCCTACCGGTGAACTCCTCCAATCATGGATTCTCTGTAACAGTGTAGTCACGACTTGGATATTAAATTCACTATCAAAAGAAATTTTTGCCAGCGTCAATTTCTCTGATTCAACACACGAAATATAA ATGGCAGAACCCATCGTACCGCCAACTTCCTCCTCATCCACCAACCAAACGATGAATTTCTCCACCATTGAGCAATATTCCAATCCCTACTTCCTACACCATTCAGAGACCATGAGCATCGTCCTCGTATCCAACCTCCTCACCGAAACGAACTACACCTCCTGGAGCCAAGCAATGAAAATCGGTTTAACCGTGAAGAACAAACTCGGTTTCATCGATTACAGCATCACACGTCCTACCGGTGAACTCCTCCAATCATGGATTCTCTGTAACAGTGTAGTCACGACTTGGATATTAAATTCACTATCAAAAGAAATTTTTGCCAGCGTCAATTTCTCTGATTCAACACACGAAATATAA MAEPIVPPTSSSSTNQTMNFSTIEQYSNPYFLHHSETMSIVLVSNLLTETNYTSWSQAMKIGLTVKNKLGFIDYSITRPTGELLQSWILCNSVVTTWILNSLSKEIFASVNFSDSTHEI Homology
BLAST of IVF0017570 vs. ExPASy TrEMBL
Match: A0A6J1DIP8 (uncharacterized protein LOC111020399 OS=Momordica charantia OX=3673 GN=LOC111020399 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 1.3e-31 Identity = 75/119 (63.03%), Postives = 93/119 (78.15%), Query Frame = 0
BLAST of IVF0017570 vs. ExPASy TrEMBL
Match: A0A6J1DNP7 (uncharacterized protein LOC111022065 OS=Momordica charantia OX=3673 GN=LOC111022065 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 9.6e-30 Identity = 67/102 (65.69%), Postives = 84/102 (82.35%), Query Frame = 0
BLAST of IVF0017570 vs. ExPASy TrEMBL
Match: A0A6J1CMF8 (uncharacterized protein LOC111012468 OS=Momordica charantia OX=3673 GN=LOC111012468 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.6e-29 Identity = 68/111 (61.26%), Postives = 87/111 (78.38%), Query Frame = 0
BLAST of IVF0017570 vs. ExPASy TrEMBL
Match: A0A6J1DKR8 (uncharacterized protein LOC111021831 OS=Momordica charantia OX=3673 GN=LOC111021831 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.6e-24 Identity = 63/118 (53.39%), Postives = 85/118 (72.03%), Query Frame = 0
BLAST of IVF0017570 vs. ExPASy TrEMBL
Match: A0A0A0LI19 (Retrotran_gag_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G151060 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 2.1e-24 Identity = 65/95 (68.42%), Postives = 72/95 (75.79%), Query Frame = 0
BLAST of IVF0017570 vs. NCBI nr
Match: XP_038887186.1 (uncharacterized protein LOC120077373 [Benincasa hispida]) HSP 1 Score: 162 bits (409), Expect = 6.42e-48 Identity = 82/117 (70.09%), Postives = 94/117 (80.34%), Query Frame = 0
BLAST of IVF0017570 vs. NCBI nr
Match: XP_038902375.1 (uncharacterized protein LOC120089012 [Benincasa hispida]) HSP 1 Score: 149 bits (377), Expect = 1.87e-43 Identity = 73/121 (60.33%), Postives = 93/121 (76.86%), Query Frame = 0
BLAST of IVF0017570 vs. NCBI nr
Match: XP_038875043.1 (uncharacterized protein LOC120067569 [Benincasa hispida]) HSP 1 Score: 147 bits (372), Expect = 7.80e-41 Identity = 74/117 (63.25%), Postives = 87/117 (74.36%), Query Frame = 0
BLAST of IVF0017570 vs. NCBI nr
Match: XP_022142327.1 (uncharacterized protein LOC111012468 [Momordica charantia]) HSP 1 Score: 142 bits (358), Expect = 2.11e-40 Identity = 68/110 (61.82%), Postives = 86/110 (78.18%), Query Frame = 0
BLAST of IVF0017570 vs. NCBI nr
Match: XP_038874906.1 (uncharacterized protein LOC120067409 [Benincasa hispida]) HSP 1 Score: 143 bits (360), Expect = 6.16e-40 Identity = 70/115 (60.87%), Postives = 91/115 (79.13%), Query Frame = 0
BLAST of IVF0017570 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 59.3 bits (142), Expect = 2.4e-09 Identity = 32/98 (32.65%), Postives = 54/98 (55.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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