IVF0017494 (gene) Melon (IVF77) v1

Overview
NameIVF0017494
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Locationchr01: 18149761 .. 18154308 (-)
RNA-Seq ExpressionIVF0017494
SyntenyIVF0017494
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGCCAAGGAGAAGTGCACGTAGGGATGGCCAAGGAGGCGGAGGAATAGGAGCAGGATGTGTTCAACCTGAGGTGCAGCCAGTAACCCAAGCCACTGACCCGACTGTGCCAGTTACTCATGCGGACCTTGCTGCAATGGAGCAGAGGTTCAGGGATTTGATTATGCAGATGCGGAAGCAGCAGCAGCCTGCCCCGCCAGCTCCTGCTCTAGCTTCTGCTCCAGTTCCAGTTGTGCCCCAGGTCGTGTCGGATCAGTTGTCGGCAGAGGCCAAACACTTAAAGGATTTCAGGAAGTATAACCCCACGACATTCGATGGGTATTTGAAGGACCCCACCAGGGCTCAACTGTGGTTATCTTCTTTGGAGACTATATTTCGGTATATGAAGTGCCCTGAAGATCAGAAAGTTCGGTGCGCCGTTTTCATGTTGACAGACAGAGGTACTGCTTGGTGGGAGACGACAGAGAGAATGCTAGGGGGTGACGTGGGTCAGATCACTTGGCAACAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCTAGTTTGAGAGATGCCAAGCGGTAGGAGTTCTTGAACTTAGAGCAGAACAACATGACAGTAGAGCAGTATGATGCGGAGTTTGACATGTTATCCCACTTCGCTCTCGAGATGATATCGACTGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCAGGCTTGACATCCAGGTTTGGTTCGAGCCTTCCGACCCGCCACTCATGCCGATGCACTGCCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCCAAGGTTGCAGGTAGAGGTTCGACCTCAGGACAGAAAAGGAAGGCTGAGCAGCAGCCTACGTCAGTGCCACAGCGGAACTTCAGATCAGGTGGTGAGTTTCGCCGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAAGCTACCAGAGGGAAGCCGTTGTGTACCACTTGCGGGAAGCACCATCTGGGTCGTTGTTTATTTGGGACCAGGATTTGCTTCAAGTGTAGGCAAGAGGGGCATACAGCTGATAGATGCCCGATGAGACTTATCGGGAATGCACAGAATCAAAGAGCAGGTGCCCCACATCAGGGTAAAGTCTTTGCTACCAATAAGACAGAGGCTGAGAGAGAAGGCATGGTAATGACAAGTACGCTTCCAGTGTTGGGGCATTATGCCCTAGTTTTGTTTGATTCGGGTTCGTCACATTCCTTTATCTCTTCTGCATTTGTGTTGCATGCCCGCTTAGAGGTAGACCCCTACACCATGTGCTATCAGTATCTACTCCTTCTGGGGAGTGTATGTTGTCGAAAGAAAAGGTGAAAGGATGTCAGATTGAGATAACAGGTCATGTGATTGAAGTAACGTTGTTAGTCCTGGACATGCTCGATTTCGATGTAATTCTGGGTATGAATTGGCTAGCTGCTAACCATGCTAGCATAAATTGTTTCCGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGAAGGGTCAAGGTCGTTACCTCAGGTAATCTCAGCCATGAGGGCCAGCAAACTGCTTAGTCAGGGTACTTGGAGTATCTTGGCGAGCTTGGTGGATACTAGAGAGGTTGATATATCCCTGTCATCAGAACCAGTGGTAAGGGACTATCTAGACGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGATTGAGTTTGTCATAAAGCTGGAGCCGGGCACGGTTCCTATATTTAGAGCCCCATACAGAATGGCCACAGTAGAATTAAAAGAACTAAAAGTGCAGTTACAGGAGTTGCTTGATAAGGGCTTCATTCGACCGAGTGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGCCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGATGACCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGTTGAGGATTAAGGATGGTGATGTACCGAAGACGACCTTTTGTTCCAGATACGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATCAATAGAGTTTTTAGGGAGTTCCTAGACACTTTTGTGATCGTGTTTATTGATGATATTTTGATATATTCCAAGACAGAGGCCGAGCATGAGGAGCATTTACGTATGGTTCTGTAAACCCTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAATGTGAGTTTTGGTTGAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGCCCCGACCCTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGATGGTTTGTGGAGAACTTTTCCCGTATAGCTACTCCTCTTACTCAGTTGACTAGGAAGGGAGCTCCTTTCGTTTGGAGCAAGGCATGTGAAGATAGTTTCCAGAGCCTTAAACAGAAGCTAGTTACTACACCGGTTCTTACTGTACCTGATGGTTCAGGAAGTTTTGTGATTTACAGTGATGCTTCTAAGAAGGATTTGGGTTCTGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTCGTTAGTTGAAGAGTCATGAGCAGAATTACCCTACACACGATTTAGAGTTGGCAGCAGTGGTTTTTGCACTGAAGATATGGAGGCATTACTTGTATGGTGAAAAGATACAGATCTTCACGAATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGATTATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGATAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGATAGGCCCTGTTGCATCAAGATCTTGAGAGGGCTGAGATTGCAGTGTCAGTAGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGTCGACTTTGAGGCAAAAGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGCAGAGGCAGGGCAAGCTGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGCCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCTCATTTTCCATGCACCCGGGTAGTACGAAGATGTATTAGGACCTAAAGCAGGTTTATTGGTGGCGTAATATGAAGAGAGAGGTAGCAGACTTCGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAGGGCACCAAGGCAGAAACCAGCGGATTTATTACAACCCTTGAGCGTACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCAAGAACTCTGAGGGGTTTTATAGTGATTTGGGTTGTGGTTGACAGGCTTACCAAATTAGCGCACTTTGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGTACAGCTGTACATGTCTGAGATAGTGAGACTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTTCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTAAACCAAGTTTTAGAGGATATGTTGCAAGCGTGTGCATTAGAATTTCCAGGTAGTTGGGACTCCCACTTGCATTTGATGGAATTTGCTTATATTAACAGTTTTCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCTATATGCTGGGGTGAGGTGGGTGAGTAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAAATTAGATCACGTATGCATACCGCACAGAGTAGGCAGAAGAGTTATGCGGATGTGAGACGGAAGGATCTTGAGTTTGATGTGGGGGACAAAGTGTTCTTGAAAGTAGCACCCATGAAAGGTGTCTTACGATTTGAAAAGAGAGAGAAGCTGAGTCCTCATTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCGTATCGCTTGGCGTTGCCACCATCACTCTCGGTAGTTCATGATGTGTTCCATGTTTCTATGTTGAGGAAGTACGTACCGGATCCATCCCATGTAGTGGATTACGAGCCACTAGAAATTGATGAAAACTTGAGCTATATAGAACAACCCGTTGAGGTTCTGGCTAGAGAGGTGAAAATGTTGAGGAATAGAGAAATCCCTTTGGTTAAAGTCTTATGGAGGAATCACGGGATTGAAGAGGCTACATGGGAGCGAGAAGATGACATGAGGTCTCGTTATCCCGATTTGTTCGAGGAATAA

mRNA sequence

ATGCCGCCAAGGAGAAGTGCACGTAGGGATGGCCAAGGAGGCGGAGGAATAGGAGCAGGATGTGTTCAACCTGAGGTGCAGCCAGTAACCCAAGCCACTGACCCGACTGTGCCAGTTACTCATGCGGACCTTGCTGCAATGGAGCAGAGGTTCAGGGATTTGATTATGCAGATGCGGAAGCAGCAGCAGCCTGCCCCGCCAGCTCCTGCTCTAGCTTCTGCTCCAGTTCCAGTTGTGCCCCAGGTCGTGTCGGATCAGTTGTCGGCAGAGGCCAAACACTTAAAGGATTTCAGGAAGTATAACCCCACGACATTCGATGGGTATTTGAAGGACCCCACCAGGGCTCAACTGTGGTTATCTTCTTTGGAGACTATATTTCGGTATATGAAGTGCCCTGAAGATCAGAAAGTTCGGTGCGCCGTTTTCATGTTGACAGACAGAGGTACTGCTTGGTGGGAGACGACAGAGAGAATGCTAGGGGGTGACGTGGGTCAGATCACTTGGCAACAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCTAGTTTGAGAGATGCCAAGCGGTTTGGTTCGAGCCTTCCGACCCGCCACTCATGCCGATGCACTGCCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCCAAGGTTGCAGGTAGAGGTTCGACCTCAGGACAGAAAAGGAAGGCTGAGCAGCAGCCTACGTCAGTGCCACAGCGGAACTTCAGATCAGGTGGTGAGTTTCGCCGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAAGCTACCAGAGGGAAGCCGTTGTGTACCACTTGCGGGAAGCACCATCTGGGTCGTTGTTTATTTGGGACCAGGATTTGCTTCAAGTGTAGGCAAGAGGGGCATACAGCTGATAGATGCCCGATGAGACTTATCGGGAATGCACAGAATCAAAGAGCAGGTGCCCCACATCAGGGTAAAGTCTTTGCTACCAATAAGACAGAGGCTGAGAGAGAAGGCATGGTAATGACAAGTACGCTTCCAGTGTTGGGGCATTATGCCCTAGTTTTGTTTGATTCGGTATCTACTCCTTCTGGGGAGTGTATGTTGTCGAAAGAAAAGGTGAAAGGATGTCAGATTGAGATAACAGGTCATGTGATTGAAGTAACGTTGTTAGTCCTGGACATGCTCGATTTCGATGTAATTCTGGGTATGAATTGGCTAGCTGCTAACCATGCTAGCATAAATTGTTTCCGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGAAGGGTCAAGGTCGTTACCTCAGGTAATCTCAGCCATGAGGGCCAGCAAACTGCTTAGTCAGGGTACTTGGAGTATCTTGGCGAGCTTGGTGGATACTAGAGAGGTTGATATATCCCTGTCATCAGAACCAGTGGTAAGGGACTATCTAGACGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGATTGAGTTTGTCATAAAGCTGGAGCCGGGCACGGTTCCTATATTTAGAGCCCCATACAGAATGGCCACAGTAGAATTAAAAGAACTAAAAGTGCAGTTACAGGAGTTGCTTGATAAGGGCTTCATTCGACCGAGTGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGCCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGATGACCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGTTGAGGATTAAGGATGGTGATGTACCGAAGACGACCTTTTGTTCCAGATACGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATCAATAGAGTTTTTAGGGAGTTCCTAGACACTTTTGTGATCGTGTTTATTGATGATATTTTGATATATTCCAAGACAGAGGCCGAGCATGAGGAGCATTTACGTATGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGCCCCGACCCTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGATGGTTTGTGGAGAACTTTTCCCGTATAGCTACTCCTCTTACTCAGTTGACTAGGAAGGGAGCTCCTTTCGTTTGGAGCAAGGCATGTGAAGATAGTTTCCAGAGCCTTAAACAGAAGCTAGTTACTACACCGGTTCTTACTGTACCTGATGGTTCAGGAAGTTTTGTGATTTACAGTGATGCTTCTAAGAAGGATTTGGGTTCTGTATTGATGCAGCAAGGTAAGTTGAAGAGTCATGAGCAGAATTACCCTACACACGATTTAGAGTTGGCAGCAGTGGTTTTTGCACTGAAGATATGGAGGCATTACTTGTATGGTGAAAAGATACAGATCTTCACGAATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGATTATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGATAGCTGATGCTCTTAGTAGAAAGGCCCTGTTGCATCAAGATCTTGAGAGGGCTGAGATTGCAGTGTCAGTAGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGTCGACTTTGAGGCAAAAGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGCAGAGGCAGGGCAAGCTGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGCCTCTGTGTGCCATCAGATAGTGCGGTTAGGGCACCAAGGCAGAAACCAGCGGATTTATTACAACCCTTGAGCGTACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCAAGAACTCTGAGGGGTTTTATAGTGATTTGGGTTGTGGTTGACAGGCTTACCAAATTAGCGCACTTTGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGTACAGCTGTACATGTCTGAGATAGTGAGACTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTTCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTAAACCAAGTTTTAGAGGATATGTTGCAAGCGTGTGCATTAGAATTTCCAGGTAGTTGGGACTCCCACTTGCATTTGATGGAATTTGCTTATATTAACAGTTTTCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCTATATGCTGGGGTGAGTCTACTAACGAAGCGATACAGAAAATTAGATCACGTATGCATACCGCACAGAGTAGGCAGAAGAGTTATGCGGATGTGAGACGGAAGGATCTTGAGTTTGATGTGGGGGACAAAGTGTTCTTGAAAGTAGCACCCATGAAAGGTGTCTTACGATTTGAAAAGAGAGAGAAGCTGAGTCCTCATTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCGTATCGCTTGGCGTTGCCACCATCACTCTCGGTAGTTCATGATGTGTTCCATGTTTCTATGTTGAGGAAGTACGTACCGGATCCATCCCATGTAGTGGATTACGAGCCACTAGAAATTGATGAAAACTTGAGCTATATAGAACAACCCGTTGAGGTTCTGGCTAGAGAGGTGAAAATGTTGAGGAATAGAGAAATCCCTTTGGTTAAAGTCTTATGGAGGAATCACGGGATTGAAGAGGCTACATGGGAGCGAGAAGATGACATGAGGTCTCGTTATCCCGATTTGTTCGAGGAATAA

Coding sequence (CDS)

ATGCCGCCAAGGAGAAGTGCACGTAGGGATGGCCAAGGAGGCGGAGGAATAGGAGCAGGATGTGTTCAACCTGAGGTGCAGCCAGTAACCCAAGCCACTGACCCGACTGTGCCAGTTACTCATGCGGACCTTGCTGCAATGGAGCAGAGGTTCAGGGATTTGATTATGCAGATGCGGAAGCAGCAGCAGCCTGCCCCGCCAGCTCCTGCTCTAGCTTCTGCTCCAGTTCCAGTTGTGCCCCAGGTCGTGTCGGATCAGTTGTCGGCAGAGGCCAAACACTTAAAGGATTTCAGGAAGTATAACCCCACGACATTCGATGGGTATTTGAAGGACCCCACCAGGGCTCAACTGTGGTTATCTTCTTTGGAGACTATATTTCGGTATATGAAGTGCCCTGAAGATCAGAAAGTTCGGTGCGCCGTTTTCATGTTGACAGACAGAGGTACTGCTTGGTGGGAGACGACAGAGAGAATGCTAGGGGGTGACGTGGGTCAGATCACTTGGCAACAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCTAGTTTGAGAGATGCCAAGCGGTTTGGTTCGAGCCTTCCGACCCGCCACTCATGCCGATGCACTGCCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCCAAGGTTGCAGGTAGAGGTTCGACCTCAGGACAGAAAAGGAAGGCTGAGCAGCAGCCTACGTCAGTGCCACAGCGGAACTTCAGATCAGGTGGTGAGTTTCGCCGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAAGCTACCAGAGGGAAGCCGTTGTGTACCACTTGCGGGAAGCACCATCTGGGTCGTTGTTTATTTGGGACCAGGATTTGCTTCAAGTGTAGGCAAGAGGGGCATACAGCTGATAGATGCCCGATGAGACTTATCGGGAATGCACAGAATCAAAGAGCAGGTGCCCCACATCAGGGTAAAGTCTTTGCTACCAATAAGACAGAGGCTGAGAGAGAAGGCATGGTAATGACAAGTACGCTTCCAGTGTTGGGGCATTATGCCCTAGTTTTGTTTGATTCGGTATCTACTCCTTCTGGGGAGTGTATGTTGTCGAAAGAAAAGGTGAAAGGATGTCAGATTGAGATAACAGGTCATGTGATTGAAGTAACGTTGTTAGTCCTGGACATGCTCGATTTCGATGTAATTCTGGGTATGAATTGGCTAGCTGCTAACCATGCTAGCATAAATTGTTTCCGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGAAGGGTCAAGGTCGTTACCTCAGGTAATCTCAGCCATGAGGGCCAGCAAACTGCTTAGTCAGGGTACTTGGAGTATCTTGGCGAGCTTGGTGGATACTAGAGAGGTTGATATATCCCTGTCATCAGAACCAGTGGTAAGGGACTATCTAGACGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGATTGAGTTTGTCATAAAGCTGGAGCCGGGCACGGTTCCTATATTTAGAGCCCCATACAGAATGGCCACAGTAGAATTAAAAGAACTAAAAGTGCAGTTACAGGAGTTGCTTGATAAGGGCTTCATTCGACCGAGTGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGCCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGATGACCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGTTGAGGATTAAGGATGGTGATGTACCGAAGACGACCTTTTGTTCCAGATACGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATCAATAGAGTTTTTAGGGAGTTCCTAGACACTTTTGTGATCGTGTTTATTGATGATATTTTGATATATTCCAAGACAGAGGCCGAGCATGAGGAGCATTTACGTATGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGCCCCGACCCTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGATGGTTTGTGGAGAACTTTTCCCGTATAGCTACTCCTCTTACTCAGTTGACTAGGAAGGGAGCTCCTTTCGTTTGGAGCAAGGCATGTGAAGATAGTTTCCAGAGCCTTAAACAGAAGCTAGTTACTACACCGGTTCTTACTGTACCTGATGGTTCAGGAAGTTTTGTGATTTACAGTGATGCTTCTAAGAAGGATTTGGGTTCTGTATTGATGCAGCAAGGTAAGTTGAAGAGTCATGAGCAGAATTACCCTACACACGATTTAGAGTTGGCAGCAGTGGTTTTTGCACTGAAGATATGGAGGCATTACTTGTATGGTGAAAAGATACAGATCTTCACGAATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGATTATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGATAGCTGATGCTCTTAGTAGAAAGGCCCTGTTGCATCAAGATCTTGAGAGGGCTGAGATTGCAGTGTCAGTAGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGTCGACTTTGAGGCAAAAGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGCAGAGGCAGGGCAAGCTGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGCCTCTGTGTGCCATCAGATAGTGCGGTTAGGGCACCAAGGCAGAAACCAGCGGATTTATTACAACCCTTGAGCGTACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCAAGAACTCTGAGGGGTTTTATAGTGATTTGGGTTGTGGTTGACAGGCTTACCAAATTAGCGCACTTTGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGTACAGCTGTACATGTCTGAGATAGTGAGACTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTTCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTAAACCAAGTTTTAGAGGATATGTTGCAAGCGTGTGCATTAGAATTTCCAGGTAGTTGGGACTCCCACTTGCATTTGATGGAATTTGCTTATATTAACAGTTTTCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCTATATGCTGGGGTGAGTCTACTAACGAAGCGATACAGAAAATTAGATCACGTATGCATACCGCACAGAGTAGGCAGAAGAGTTATGCGGATGTGAGACGGAAGGATCTTGAGTTTGATGTGGGGGACAAAGTGTTCTTGAAAGTAGCACCCATGAAAGGTGTCTTACGATTTGAAAAGAGAGAGAAGCTGAGTCCTCATTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCGTATCGCTTGGCGTTGCCACCATCACTCTCGGTAGTTCATGATGTGTTCCATGTTTCTATGTTGAGGAAGTACGTACCGGATCCATCCCATGTAGTGGATTACGAGCCACTAGAAATTGATGAAAACTTGAGCTATATAGAACAACCCGTTGAGGTTCTGGCTAGAGAGGTGAAAATGTTGAGGAATAGAGAAATCCCTTTGGTTAAAGTCTTATGGAGGAATCACGGGATTGAAGAGGCTACATGGGAGCGAGAAGATGACATGAGGTCTCGTTATCCCGATTTGTTCGAGGAATAA

Protein sequence

MPPRRSARRDGQGGGGIGAGCVQPEVQPVTQATDPTVPVTHADLAAMEQRFRDLIMQMRKQQQPAPPAPALASAPVPVVPQVVSDQLSAEAKHLKDFRKYNPTTFDGYLKDPTRAQLWLSSLETIFRYMKCPEDQKVRCAVFMLTDRGTAWWETTERMLGGDVGQITWQQFKESFYAKFFSASLRDAKRFGSSLPTRHSCRCTALAVDLSLQERANSSKVAGRGSTSGQKRKAEQQPTSVPQRNFRSGGEFRRFQQKPFEAGEATRGKPLCTTCGKHHLGRCLFGTRICFKCRQEGHTADRCPMRLIGNAQNQRAGAPHQGKVFATNKTEAEREGMVMTSTLPVLGHYALVLFDSVSTPSGECMLSKEKVKGCQIEITGHVIEVTLLVLDMLDFDVILGMNWLAANHASINCFRKEVTFNPPSMASFKFKGEGSRSLPQVISAMRASKLLSQGTWSILASLVDTREVDISLSSEPVVRDYLDVFPEELPGLPPHREIEFVIKLEPGTVPIFRAPYRMATVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFCSRYGHYEFIVMSFGLTNAPAVFMDLINRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSLKQKLVTTPVLTVPDGSGSFVIYSDASKKDLGSVLMQQGKLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPGKANVIADALSRKALLHQDLERAEIAVSVGAVTMQLAQLTVQSTLRQKIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVRAPRQKPADLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFVPGKSTYTASKWVQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLQACALEFPGSWDSHLHLMEFAYINSFQATIGMAPFEALYGKCCRSPICWGESTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFDVGDKVFLKVAPMKGVLRFEKREKLSPHFVGPFEILERIGPVAYRLALPPSLSVVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYIEQPVEVLAREVKMLRNREIPLVKVLWRNHGIEEATWEREDDMRSRYPDLFEE
Homology
[Close]
BLAST of IVF0017494 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 2.6e-112
Identity = 265/879 (30.15%), Postives = 434/879 (49.37%), Query Frame = 0 

Query: 486  EELPGLPPHREIEFVIKLEPGTVPIFRAPYRMATVELKELKVQLQELLDKGFIRPSVSPW 545
            E+LP   P + +EF ++L      +    Y +   +++ +  ++ + L  G IR S +  
Sbjct: 391  EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 546  GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 605
              PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451  ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 606  QLRIKDGDVPKTTFCSRYGHYEFIVMSFGLTNAPAVFMDLINRVFREFLDTFVIVFIDDI 665
             +R++ GD  K  F    G +E++VM +G++ APA F   IN +  E  ++ V+ ++DDI
Sbjct: 511  LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 666  LIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAGVSVDPAKIE 725
            LI+SK+E+EH +H++                        V F+G+ +S+ G +     I+
Sbjct: 571  LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 726  AVTSWPRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQS 785
             V  W +P    E+R FLG   Y R F+   S++  PL  L +K   + W+     + ++
Sbjct: 631  KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 786  LKQKLVTTPVLTVPDGSGSFVIYSDASKKDLGSVLMQQ-------------GKLKSHEQN 845
            +KQ LV+ PVL   D S   ++ +DAS   +G+VL Q+              K+   + N
Sbjct: 691  IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 846  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTNHKSLKYFFTQKELIMRQR--RWLELV 905
            Y   D E+ A++ +LK WRHYL    E  +I T+H++L    T +     +R  RW   +
Sbjct: 751  YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 906  KDYDCEILYHPGKANVIADALSRKALLHQDLERAEIAVSVGAVTMQLAQLTVQSTLRQKI 965
            +D++ EI Y PG AN IADALSR     + + +     S+  V     Q+++    + ++
Sbjct: 811  QDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVN----QISITDDFKNQV 870

Query: 966  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAV----------- 1025
            +   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +           
Sbjct: 871  VTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEE 930

Query: 1026 -----------------------------------------RAPRQKPADLLQPLSVPEW 1085
                                                     ++   KP   LQP+   E 
Sbjct: 931  GKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSER 990

Query: 1086 KWENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFVPGKSTYTASKWVQLYMSEIVRLH 1145
             WE++SMDFIT LP +  G+  ++VVVDR +K+A  VP   + TA +  +++   ++   
Sbjct: 991  PWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYF 1050

Query: 1146 GVPVSIVSDRDARFTFKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLQACAL 1205
            G P  I++D D  FT + WK         + FS  + PQTDGQTER NQ +E +L+    
Sbjct: 1051 GNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCS 1110

Query: 1206 EFPGSWDSHLHLMEFAYINSFQATIGMAPFEALYG-KCCRSPI---CWGESTNE------ 1258
              P +W  H+ L++ +Y N+  +   M PFE ++      SP+    + + T+E      
Sbjct: 1111 THPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETI 1170

[Close]
BLAST of IVF0017494 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 2.6e-112
Identity = 265/879 (30.15%), Postives = 434/879 (49.37%), Query Frame = 0 

Query: 486  EELPGLPPHREIEFVIKLEPGTVPIFRAPYRMATVELKELKVQLQELLDKGFIRPSVSPW 545
            E+LP   P + +EF ++L      +    Y +   +++ +  ++ + L  G IR S +  
Sbjct: 391  EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 546  GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 605
              PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451  ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 606  QLRIKDGDVPKTTFCSRYGHYEFIVMSFGLTNAPAVFMDLINRVFREFLDTFVIVFIDDI 665
             +R++ GD  K  F    G +E++VM +G++ APA F   IN +  E  ++ V+ ++DDI
Sbjct: 511  LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 666  LIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAGVSVDPAKIE 725
            LI+SK+E+EH +H++                        V F+G+ +S+ G +     I+
Sbjct: 571  LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 726  AVTSWPRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQS 785
             V  W +P    E+R FLG   Y R F+   S++  PL  L +K   + W+     + ++
Sbjct: 631  KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 786  LKQKLVTTPVLTVPDGSGSFVIYSDASKKDLGSVLMQQ-------------GKLKSHEQN 845
            +KQ LV+ PVL   D S   ++ +DAS   +G+VL Q+              K+   + N
Sbjct: 691  IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 846  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTNHKSLKYFFTQKELIMRQR--RWLELV 905
            Y   D E+ A++ +LK WRHYL    E  +I T+H++L    T +     +R  RW   +
Sbjct: 751  YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 906  KDYDCEILYHPGKANVIADALSRKALLHQDLERAEIAVSVGAVTMQLAQLTVQSTLRQKI 965
            +D++ EI Y PG AN IADALSR     + + +     S+  V     Q+++    + ++
Sbjct: 811  QDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVN----QISITDDFKNQV 870

Query: 966  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAV----------- 1025
            +   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +           
Sbjct: 871  VTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEE 930

Query: 1026 -----------------------------------------RAPRQKPADLLQPLSVPEW 1085
                                                     ++   KP   LQP+   E 
Sbjct: 931  GKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSER 990

Query: 1086 KWENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFVPGKSTYTASKWVQLYMSEIVRLH 1145
             WE++SMDFIT LP +  G+  ++VVVDR +K+A  VP   + TA +  +++   ++   
Sbjct: 991  PWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYF 1050

Query: 1146 GVPVSIVSDRDARFTFKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLQACAL 1205
            G P  I++D D  FT + WK         + FS  + PQTDGQTER NQ +E +L+    
Sbjct: 1051 GNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCS 1110

Query: 1206 EFPGSWDSHLHLMEFAYINSFQATIGMAPFEALYG-KCCRSPI---CWGESTNE------ 1258
              P +W  H+ L++ +Y N+  +   M PFE ++      SP+    + + T+E      
Sbjct: 1111 THPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETI 1170

[Close]
BLAST of IVF0017494 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 2.6e-112
Identity = 265/879 (30.15%), Postives = 434/879 (49.37%), Query Frame = 0 

Query: 486  EELPGLPPHREIEFVIKLEPGTVPIFRAPYRMATVELKELKVQLQELLDKGFIRPSVSPW 545
            E+LP   P + +EF ++L      +    Y +   +++ +  ++ + L  G IR S +  
Sbjct: 391  EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 546  GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 605
              PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451  ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 606  QLRIKDGDVPKTTFCSRYGHYEFIVMSFGLTNAPAVFMDLINRVFREFLDTFVIVFIDDI 665
             +R++ GD  K  F    G +E++VM +G++ APA F   IN +  E  ++ V+ ++DDI
Sbjct: 511  LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 666  LIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAGVSVDPAKIE 725
            LI+SK+E+EH +H++                        V F+G+ +S+ G +     I+
Sbjct: 571  LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 726  AVTSWPRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQS 785
             V  W +P    E+R FLG   Y R F+   S++  PL  L +K   + W+     + ++
Sbjct: 631  KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 786  LKQKLVTTPVLTVPDGSGSFVIYSDASKKDLGSVLMQQ-------------GKLKSHEQN 845
            +KQ LV+ PVL   D S   ++ +DAS   +G+VL Q+              K+   + N
Sbjct: 691  IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 846  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTNHKSLKYFFTQKELIMRQR--RWLELV 905
            Y   D E+ A++ +LK WRHYL    E  +I T+H++L    T +     +R  RW   +
Sbjct: 751  YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 906  KDYDCEILYHPGKANVIADALSRKALLHQDLERAEIAVSVGAVTMQLAQLTVQSTLRQKI 965
            +D++ EI Y PG AN IADALSR     + + +     S+  V     Q+++    + ++
Sbjct: 811  QDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVN----QISITDDFKNQV 870

Query: 966  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAV----------- 1025
            +   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +           
Sbjct: 871  VTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEE 930

Query: 1026 -----------------------------------------RAPRQKPADLLQPLSVPEW 1085
                                                     ++   KP   LQP+   E 
Sbjct: 931  GKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSER 990

Query: 1086 KWENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFVPGKSTYTASKWVQLYMSEIVRLH 1145
             WE++SMDFIT LP +  G+  ++VVVDR +K+A  VP   + TA +  +++   ++   
Sbjct: 991  PWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYF 1050

Query: 1146 GVPVSIVSDRDARFTFKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLQACAL 1205
            G P  I++D D  FT + WK         + FS  + PQTDGQTER NQ +E +L+    
Sbjct: 1051 GNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCS 1110

Query: 1206 EFPGSWDSHLHLMEFAYINSFQATIGMAPFEALYG-KCCRSPI---CWGESTNE------ 1258
              P +W  H+ L++ +Y N+  +   M PFE ++      SP+    + + T+E      
Sbjct: 1111 THPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETI 1170

[Close]
BLAST of IVF0017494 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 2.6e-112
Identity = 265/879 (30.15%), Postives = 434/879 (49.37%), Query Frame = 0 

Query: 486  EELPGLPPHREIEFVIKLEPGTVPIFRAPYRMATVELKELKVQLQELLDKGFIRPSVSPW 545
            E+LP   P + +EF ++L      +    Y +   +++ +  ++ + L  G IR S +  
Sbjct: 391  EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 546  GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 605
              PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451  ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 606  QLRIKDGDVPKTTFCSRYGHYEFIVMSFGLTNAPAVFMDLINRVFREFLDTFVIVFIDDI 665
             +R++ GD  K  F    G +E++VM +G++ APA F   IN +  E  ++ V+ ++DDI
Sbjct: 511  LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 666  LIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAGVSVDPAKIE 725
            LI+SK+E+EH +H++                        V F+G+ +S+ G +     I+
Sbjct: 571  LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 726  AVTSWPRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQS 785
             V  W +P    E+R FLG   Y R F+   S++  PL  L +K   + W+     + ++
Sbjct: 631  KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 786  LKQKLVTTPVLTVPDGSGSFVIYSDASKKDLGSVLMQQ-------------GKLKSHEQN 845
            +KQ LV+ PVL   D S   ++ +DAS   +G+VL Q+              K+   + N
Sbjct: 691  IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 846  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTNHKSLKYFFTQKELIMRQR--RWLELV 905
            Y   D E+ A++ +LK WRHYL    E  +I T+H++L    T +     +R  RW   +
Sbjct: 751  YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 906  KDYDCEILYHPGKANVIADALSRKALLHQDLERAEIAVSVGAVTMQLAQLTVQSTLRQKI 965
            +D++ EI Y PG AN IADALSR     + + +     S+  V     Q+++    + ++
Sbjct: 811  QDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVN----QISITDDFKNQV 870

Query: 966  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAV----------- 1025
            +   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +           
Sbjct: 871  VTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEE 930

Query: 1026 -----------------------------------------RAPRQKPADLLQPLSVPEW 1085
                                                     ++   KP   LQP+   E 
Sbjct: 931  GKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSER 990

Query: 1086 KWENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFVPGKSTYTASKWVQLYMSEIVRLH 1145
             WE++SMDFIT LP +  G+  ++VVVDR +K+A  VP   + TA +  +++   ++   
Sbjct: 991  PWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYF 1050

Query: 1146 GVPVSIVSDRDARFTFKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLQACAL 1205
            G P  I++D D  FT + WK         + FS  + PQTDGQTER NQ +E +L+    
Sbjct: 1051 GNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCS 1110

Query: 1206 EFPGSWDSHLHLMEFAYINSFQATIGMAPFEALYG-KCCRSPI---CWGESTNE------ 1258
              P +W  H+ L++ +Y N+  +   M PFE ++      SP+    + + T+E      
Sbjct: 1111 THPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETI 1170

[Close]
BLAST of IVF0017494 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 2.6e-112
Identity = 265/879 (30.15%), Postives = 434/879 (49.37%), Query Frame = 0 

Query: 486  EELPGLPPHREIEFVIKLEPGTVPIFRAPYRMATVELKELKVQLQELLDKGFIRPSVSPW 545
            E+LP   P + +EF ++L      +    Y +   +++ +  ++ + L  G IR S +  
Sbjct: 391  EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 546  GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 605
              PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451  ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 606  QLRIKDGDVPKTTFCSRYGHYEFIVMSFGLTNAPAVFMDLINRVFREFLDTFVIVFIDDI 665
             +R++ GD  K  F    G +E++VM +G++ APA F   IN +  E  ++ V+ ++DDI
Sbjct: 511  LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 666  LIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAGVSVDPAKIE 725
            LI+SK+E+EH +H++                        V F+G+ +S+ G +     I+
Sbjct: 571  LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 726  AVTSWPRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQS 785
             V  W +P    E+R FLG   Y R F+   S++  PL  L +K   + W+     + ++
Sbjct: 631  KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 786  LKQKLVTTPVLTVPDGSGSFVIYSDASKKDLGSVLMQQ-------------GKLKSHEQN 845
            +KQ LV+ PVL   D S   ++ +DAS   +G+VL Q+              K+   + N
Sbjct: 691  IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 846  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTNHKSLKYFFTQKELIMRQR--RWLELV 905
            Y   D E+ A++ +LK WRHYL    E  +I T+H++L    T +     +R  RW   +
Sbjct: 751  YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 906  KDYDCEILYHPGKANVIADALSRKALLHQDLERAEIAVSVGAVTMQLAQLTVQSTLRQKI 965
            +D++ EI Y PG AN IADALSR     + + +     S+  V     Q+++    + ++
Sbjct: 811  QDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVN----QISITDDFKNQV 870

Query: 966  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAV----------- 1025
            +   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +           
Sbjct: 871  VTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEE 930

Query: 1026 -----------------------------------------RAPRQKPADLLQPLSVPEW 1085
                                                     ++   KP   LQP+   E 
Sbjct: 931  GKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSER 990

Query: 1086 KWENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFVPGKSTYTASKWVQLYMSEIVRLH 1145
             WE++SMDFIT LP +  G+  ++VVVDR +K+A  VP   + TA +  +++   ++   
Sbjct: 991  PWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYF 1050

Query: 1146 GVPVSIVSDRDARFTFKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLQACAL 1205
            G P  I++D D  FT + WK         + FS  + PQTDGQTER NQ +E +L+    
Sbjct: 1051 GNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCS 1110

Query: 1206 EFPGSWDSHLHLMEFAYINSFQATIGMAPFEALYG-KCCRSPI---CWGESTNE------ 1258
              P +W  H+ L++ +Y N+  +   M PFE ++      SP+    + + T+E      
Sbjct: 1111 THPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETI 1170

[Close]
BLAST of IVF0017494 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 2326.2 bits (6027), Expect = 0.0e+00
Identity = 1205/1501 (80.28%), Postives = 1248/1501 (83.14%), Query Frame = 0 

Query: 1    MPPRRSARRDGQGGGGIGAGCVQPEVQPVTQATDPTVPVTHADLAAMEQRFRDLIMQMRK 60
            MPPRR ARR G+GG G GAG VQPEVQPV QA DP  PVTHADLAAMEQRFRDLIMQMR+
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60

Query: 61   QQQPA------------PPAPALASAPVPVVPQVVSDQLSAEAKHLKDFRKYNPTTFDGY 120
            QQ+PA             PAPA A APVPV PQ V DQLSAEAKHL+DFRKYNPTTFDG 
Sbjct: 61   QQKPASPTPAPAPAPAPAPAPAPALAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121  LKDPTRAQLWLSSLETIFRYMKCPEDQKVRCAVFMLTDRGTAWWETTERMLGGDVGQITW 180
            L+DPTRAQ+WLSSLETIFRYMKCPEDQKV+CAVFMLTDRGTAWWETTERMLGGDV QITW
Sbjct: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 181  QQFKESFYAKFFSASLRDAK-------------------------RFGSSLPTRHSCR-- 240
            QQFKESFYAKFFSASLRDAK                         RF   +    + R  
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241  ------------------------CTALAVDLSLQERANSSKVAGRGSTSGQKRKAEQQP 300
                                       LAVDLSLQERANSSK AGRG TSGQKRKAEQQP
Sbjct: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQP 300

Query: 301  TSVPQRNFRSGGEFRRFQQKPFEAGEATRGKPLCTTCGKHHLGRCLFGTRICFKCRQEGH 360
              VPQRNFRSGGEFRRFQQKPFEAGEA R KPLCT CGKHHLGRCLFGTR CFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRRFQQKPFEAGEAARWKPLCTICGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 361  TADRCPMRLIGNAQNQRAGAPHQGKVFATNKTEAEREGMVMTSTLPVLGHYALVLFDSVS 420
            TADRCP+RL GNAQNQ AGAPHQG+VFATNKTEAE+ G V+T TLPVLGHYALVLFDSVS
Sbjct: 361  TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSVS 420

Query: 421  TPSGECMLSKEKVKGCQIEITGHVIEVTLLVLDMLDFDVILGMNWLAANHASINCFRKEV 480
            TPSGECMLSKEKVK CQIEI GHVIEVTLLVLDMLDFDVILGM+WLAA+HASI+C RKEV
Sbjct: 421  TPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAAHHASIDCSRKEV 480

Query: 481  TFNPPSMASFKFKGEGSRSLPQVISAMRASKLLSQGTWSILASLVDTREVDISLSSEPVV 540
            TFNPPS ASFKFKG GSRSLPQVISA+RASKLLSQGTW ILAS+VDTRE D+SLSSEPVV
Sbjct: 481  TFNPPSRASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVV 540

Query: 541  RDYLDVFPEELPGLPPHREIEFVIKLEPGTVPIFRAPYRMATVELKELKVQLQELLDKGF 600
            RDY DVFPEELPGLPPHRE+EF I+LEPGTVPI RAPYRMA  ELKELKVQLQELLDKGF
Sbjct: 541  RDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGF 600

Query: 601  IRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSK 660
            IRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSK
Sbjct: 601  IRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSK 660

Query: 661  IDLRSGYHQLRIKDGDVPKTTFCSRYGHYEFIVMSFGLTNAPAVFMDLINRVFREFLDTF 720
            IDLRSGYHQLRIKD DVPKT F SRYGHYEFIVMSFGLTNAPAVFMDL+NRVFREFLDTF
Sbjct: 661  IDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTF 720

Query: 721  VIVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAGV 780
            VIVFIDDILIYSKTEAEHEEHLRM                       VSFLGHVVSKAGV
Sbjct: 721  VIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGV 780

Query: 781  SVDPAKIEAVTSWPRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSK 840
            SVDPAKIEAVT W RPSTVSEVRSFLGLAGYYR FVENFSRIATPLTQLTRKGAPFVWSK
Sbjct: 781  SVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK 840

Query: 841  ACEDSFQSLKQKLVTTPVLTVPDGSGSFVIYSDASKKDLGSVLMQQGK--------LKSH 900
            ACEDSFQ+LKQKLVT PVLTVPDGSGSFVIYSDASKK LG VLMQQGK        LKSH
Sbjct: 841  ACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSH 900

Query: 901  EQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELIMRQRRWLELVK 960
            EQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFT+HKSLKYFFTQKEL MRQRRWLELVK
Sbjct: 901  EQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVK 960

Query: 961  DYDCEILYHPGKANVIADALSRK-----------ALLHQDLERAEIAVSVGAVTMQLAQL 1020
            DYDCEILYHPGKANV+ADALSRK           A LH+DLERAEIAVSVGAVTMQLAQL
Sbjct: 961  DYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL 1020

Query: 1021 TVQSTLRQKIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSA---- 1080
            TVQ TLRQ+IIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDS     
Sbjct: 1021 TVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKTE 1080

Query: 1081 ------------------------------------------------VRAPRQKPADLL 1140
                                                            V+APRQKPA LL
Sbjct: 1081 LLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLL 1140

Query: 1141 QPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFVPGKSTYTASKWVQLY 1200
            QPLS+PEWKWENVSMDFITGLPRTLRGF VIWVVVDRLTK AHFVPGKSTYTASKW QLY
Sbjct: 1141 QPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLY 1200

Query: 1201 MSEIVRLHGVPVSIVSDRDARFTFKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLE 1260
            MSEIVRLHGVPVSIVSDRDARFT KFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE
Sbjct: 1201 MSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTAMGTRLDFSTAFHPQTDGQTERLNQVLE 1260

Query: 1261 DMLQACALEFPGSWDSHLHLMEFAYINSFQATIGMAPFEALYGKCCRSPICWGE------ 1320
             ML+ACALEFPGSWDSHLHLMEF Y NS+QATIGMAPFEALYGKCCRSP+CWGE      
Sbjct: 1261 YMLRACALEFPGSWDSHLHLMEFVYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRL 1320

Query: 1321 -------STNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFDVGDKVFLKVAPMKGVLRFE 1332
                   STNEAIQKIRSRMHTAQSRQKSYADVRRKDLEF+VGDKVFLKVAPM+GVLRFE
Sbjct: 1321 MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFE 1380

[Close]
BLAST of IVF0017494 vs. ExPASy TrEMBL
Match: A0A5A7UDB1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00190 PE=4 SV=1)

HSP 1 Score: 2252.6 bits (5836), Expect = 0.0e+00
Identity = 1171/1489 (78.64%), Postives = 1218/1489 (81.80%), Query Frame = 0 

Query: 1    MPPRRSARRDGQGGGGIGAGCVQPEVQPVTQATDPTVPVTHADLAAMEQRFRDLIMQMRK 60
            MPPRR ARR G+GG G GAG VQPEVQPV QA DP  PVTHADLAAMEQRF+DLIMQMR+
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFKDLIMQMRE 60

Query: 61   QQQPAP------------PAPALASAPVPVVPQVVSDQLSAEAKHLKDFRKYNPTTFDGY 120
            QQ+PA             PAPA A APVPV PQVV DQLSAEAKHL+DFRKYNPTTFDG 
Sbjct: 61   QQKPASPAPAPAPAPAPVPAPAPAPAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121  LKDPTRAQLWLSSLETIFRYMKCPEDQKVRCAVFMLTDRGTAWWETTERMLGGDVGQITW 180
            L+DPTRAQLWLSSLETIFRYMKCPED KV+CAVFMLTDRGTAWWETTERMLGGDV QITW
Sbjct: 121  LEDPTRAQLWLSSLETIFRYMKCPEDPKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 181  QQFKESFYAKFFSASLRDAK-------------------------RFGSSLPTRHSCR-- 240
            QQFKESFYAKFFSASLRDAK                         RF   +    + R  
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241  ------------------------CTALAVDLSLQERANSSKVAGRGSTSGQKRKAEQQP 300
                                       LAVDLSLQERANSSK AGRGSTSGQKRKAEQQP
Sbjct: 241  KFVRGLWLDIQGLVRAFRPPTHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300

Query: 301  TSVPQRNFRSGGEFRRFQQKPFEAGEATRGKPLCTTCGKHHLGRCLFGTRICFKCRQEGH 360
              VPQRNFRSGGEFRRFQQKPFEAGEA RGKPLCTTCGKHHLGRCLFGTR CFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 361  TADRCPMRLIGNAQNQRAGAPHQGKVFATNKTEAEREGMVMTSTLPVLGHYALVLFDSVS 420
            TADRCP+RL GNA NQ AGAPHQG+VFATNKTEAE+ G V+T   P+  H+ L    SVS
Sbjct: 361  TADRCPLRLTGNAPNQGAGAPHQGRVFATNKTEAEKAGTVVTEVEPL--HHVL----SVS 420

Query: 421  TPSGECMLSKEKVKGCQIEITGHVIEVTLLVLDMLDFDVILGMNWLAANHASINCFRKEV 480
            TPSGECMLSKE+VK CQIEI GHVIEVTLLVLDMLDFDVILGM+WLAANHASI+C RKEV
Sbjct: 421  TPSGECMLSKERVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEV 480

Query: 481  TFNPPSMASFKFKGEGSRSLPQVISAMRASKLLSQGTWSILASLVDTREVDISLSSEPVV 540
            TFNPPSMASFKFKG GS+SLPQVISA++ASKLLSQGTW ILAS+VDTRE D+SLSSEPVV
Sbjct: 481  TFNPPSMASFKFKGGGSKSLPQVISAIKASKLLSQGTWGILASVVDTREADVSLSSEPVV 540

Query: 541  RDYLDVFPEELPGLPPHREIEFVIKLEPGTVPIFRAPYRMATVELKELKVQLQELLDKGF 600
            RDY DVFPEELPGLPPHRE+EF I+LE GTVPI RAPYRMA  ELKELKVQLQELLDKGF
Sbjct: 541  RDYSDVFPEELPGLPPHREVEFAIELESGTVPISRAPYRMAPAELKELKVQLQELLDKGF 600

Query: 601  IRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSK 660
            IRPSVSPWGAPVLFVKKKDGSMRLCID RELNKVTVKNRYPLPRIDDLFDQLQGATVFSK
Sbjct: 601  IRPSVSPWGAPVLFVKKKDGSMRLCIDNRELNKVTVKNRYPLPRIDDLFDQLQGATVFSK 660

Query: 661  IDLRSGYHQLRIKDGDVPKTTFCSRYGHYEFIVMSFGLTNAPAVFMDLINRVFREFLDTF 720
            IDLRSGYHQLRIKDGDVPKT F SRYGHYEFIVMSFGLTNAPAVFMDL+NRVFREFLDTF
Sbjct: 661  IDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTF 720

Query: 721  VIVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAGV 780
            VIVFIDDILIYSKTEAEHEEHLRM                       VSFLGHVVSKAGV
Sbjct: 721  VIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGV 780

Query: 781  SVDPAKIEAVTSWPRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSK 840
            SVDPAKIEAVT W RPSTVSEVRSFLGLAGYYR FVENFSRIATPLTQLTRKGAPFVWSK
Sbjct: 781  SVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK 840

Query: 841  ACEDSFQSLKQKLVTTPVLTVPDGSGSFVIYSDASKKDLGSVLMQQGK--------LKSH 900
            ACEDSFQ+LKQKLVT PVLTVP+GSGSFVIYSDA KK LG VLMQQGK        LKSH
Sbjct: 841  ACEDSFQNLKQKLVTAPVLTVPNGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSH 900

Query: 901  EQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELIMRQRRWLELVK 960
            EQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFT+HKSLKYFFTQKEL MRQRRWLELVK
Sbjct: 901  EQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVK 960

Query: 961  DYDCEILYHPGKANVIADALSRKALLHQDLERAEIAVSVGAVTMQLAQLTVQSTLRQKII 1020
            DYDCEILYHPGKANV+ADALSRK                      LAQLTVQ TLRQ+II
Sbjct: 961  DYDCEILYHPGKANVVADALSRK----------------------LAQLTVQPTLRQRII 1020

Query: 1021 DAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSA--------------- 1080
            DAQSNDPYLVEKRGLAE  QAVEFS+SSDGGLLFERRLCVPSD A               
Sbjct: 1021 DAQSNDPYLVEKRGLAETRQAVEFSLSSDGGLLFERRLCVPSDRAVKTELLSEAHSSPFS 1080

Query: 1081 -------------------------------------VRAPRQKPADLLQPLSVPEWKWE 1140
                                                 V+APRQKPA LLQPLS+PEWKWE
Sbjct: 1081 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 1140

Query: 1141 NVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFVPGKSTYTASKWVQLYMSEIVRLHGVP 1200
            NVSMDFITGLPRTL+GF VIWVVVDRLTK AHF+PGKSTYTASKW QLYMSEIVRLHGVP
Sbjct: 1141 NVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFLPGKSTYTASKWAQLYMSEIVRLHGVP 1200

Query: 1201 VSIVSDRDARFTFKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLQACALEFP 1260
            VSIVSDRDAR T KFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDML+ACALEFP
Sbjct: 1201 VSIVSDRDARSTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 1260

Query: 1261 GSWDSHLHLMEFAYINSFQATIGMAPFEALYGKCCRSPICWGE-------------STNE 1320
            GSWDSHLHLMEFAY NS+QATIGMAPFEALYGKCCRSP+CW E             STNE
Sbjct: 1261 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNE 1320

Query: 1321 AIQKIRSRMHTAQSRQKSYADVRRKDLEFDVGDKVFLKVAPMKGVLRFEKREKLSPHFVG 1331
            AIQKI+SRM TAQSRQKSYADVRRKDLEF+VGDKVFLKVAPM+GVLRFE+R KLS HFVG
Sbjct: 1321 AIQKIKSRMRTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSSHFVG 1380

[Close]
BLAST of IVF0017494 vs. ExPASy TrEMBL
Match: A0A5A7TGS7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold345G00240 PE=4 SV=1)

HSP 1 Score: 2246.9 bits (5821), Expect = 0.0e+00
Identity = 1177/1457 (80.78%), Postives = 1217/1457 (83.53%), Query Frame = 0 

Query: 1    MPPRRSARRDGQGGGGIGAGCVQPEVQPVTQATDPTVPVTHADLAAMEQRFRDLIMQMRK 60
            MPPRR ARR G+GG G  AG VQPEVQPV QATDP  PVTHADLAAMEQRFRDLIMQMR+
Sbjct: 219  MPPRRGARRGGRGGRGRRAGRVQPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMRE 278

Query: 61   QQQPAP--------PAPALASAPVPVVPQVVSDQLSAEAKHLKDFRKYNPTTFDGYLKDP 120
            QQQ AP        PAPA ASAPVPV PQVVSDQLS EAKHL+DFRKYNPTTFDG L+DP
Sbjct: 279  QQQSAPPAPAPASAPAPAPASAPVPVAPQVVSDQLSTEAKHLRDFRKYNPTTFDGSLEDP 338

Query: 121  TRAQLWLSSLETIFRYMKCPEDQKVRCAVFMLTDRGTAWWETTERMLGGDVGQITWQQFK 180
            TRAQLWLSSLETIFRYMKCPEDQKV+CAVFM TDRGTAWWET ERMLGGDV QITWQQFK
Sbjct: 339  TRAQLWLSSLETIFRYMKCPEDQKVQCAVFMFTDRGTAWWETAERMLGGDVSQITWQQFK 398

Query: 181  ESFYAKFFSASLRDAKR-------FGSSLPTRHSCR------------CTALAVDLSLQE 240
            ESFYAKFFSASLRDAKR        G     ++                T  A   +LQE
Sbjct: 399  ESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARANNLQE 458

Query: 241  RANSSKVAGRGSTSGQKRKAEQQPTSVPQRNFRSGGEFRRFQQKPFEAGEATRGKPLCTT 300
              NSSK AGRGSTSGQKRKAEQQ   VPQRNFRSGGEFRRFQQKPFEAGEA RGK LCTT
Sbjct: 459  GVNSSKTAGRGSTSGQKRKAEQQSVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKSLCTT 518

Query: 301  CGKHHLGRCLFGTRICFKCRQEGHTADRCPMRLIGNAQNQRAGAPHQGKVFATNKTEAER 360
            CGKHHLGRCLFGTR CFKCRQEGHTADRCP+RL GNAQNQ AGAPHQG+VFATNKTEAER
Sbjct: 519  CGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAER 578

Query: 361  EGMVMTSTLPVLGHYALVLFD---------------------------SVSTPSGECMLS 420
             G V+T TLPVLGHYALVLFD                           SVSTPSGECMLS
Sbjct: 579  AGTVVTGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLS 638

Query: 421  KEKVKGCQIEITGHVIEVTLLVLDMLDFDVILGMNWLAANHASINCFRKEVTFNPPSMAS 480
            KEKVK CQIEI GHVIEVTLLVLDMLDFDVILGM+WLAANHASI+C RKEVTFNP SMAS
Sbjct: 639  KEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPHSMAS 698

Query: 481  FKFKGEGSRSLPQVISAMRASKLLSQGTWSILASLVDTREVDISLSSEPVVRDYLDVFPE 540
            FKFKGEGSRSLPQVISA+RASKLLSQGTW ILAS+VDTREVD+SLSSEPVVRDY DVFPE
Sbjct: 699  FKFKGEGSRSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPE 758

Query: 541  ELPGLPPHREIEFVIKLEPGTVPIFRAPYRMATVELKELKVQLQELLDKGFIRPSVSPWG 600
            ELPGLPPHRE+EF I+LEPGTVPI RAPY+MA  ELKELKVQLQELLDKGFIRPSVSPWG
Sbjct: 759  ELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWG 818

Query: 601  APVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQ 660
            APVLFVKKKDGSMRLCIDYRELNKVTVKN+YPLP+IDDLFDQLQGATVFSKIDLRSGYHQ
Sbjct: 819  APVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPKIDDLFDQLQGATVFSKIDLRSGYHQ 878

Query: 661  LRIKDGDVPKTTFCSRYGHYEFIVMSFGLTNAPAVFMDLINRVFREFLDTFVIVFIDDIL 720
            LRIKDGDVPKT F SRYGHYEFIVMSFGLTNAPAVFMDL+NRVFREFLDTFVIVFIDDIL
Sbjct: 879  LRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIL 938

Query: 721  IYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAGVSVDPAKIEA 780
            IYSKTEAEHEEHLR+                       VSFLGHVVSKAGVSVDPAKIEA
Sbjct: 939  IYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEA 998

Query: 781  VTSWPRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSL 840
            VT W RPSTVSEVRSFLGLAGYYR FVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ+L
Sbjct: 999  VTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNL 1058

Query: 841  KQKLVTTPVLTVPDGSGSFVIYSDASKKDLGSVLMQQGK--------LKSHEQNYPTHDL 900
            KQKLVT  VLTVPDGSGSFVIYSDAS K LG VLMQQGK        LKSHEQNYPTHDL
Sbjct: 1059 KQKLVTALVLTVPDGSGSFVIYSDASMKGLGCVLMQQGKVVAFASRQLKSHEQNYPTHDL 1118

Query: 901  ELAAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYH 960
            ELAAVVFALKIWRHYLYGEKIQIFT+HKSLKYFFTQKE  MRQRRWLELVKDYDCEILYH
Sbjct: 1119 ELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKEFNMRQRRWLELVKDYDCEILYH 1178

Query: 961  PGKANVIADALSRK-----------ALLHQDLERAEIAVSVGAVTMQLAQLTVQSTLRQK 1020
            PGKANV+ADALSRK           A LH+DLERAEIAVSVGAVTMQLAQLTVQ TLRQ+
Sbjct: 1179 PGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQR 1238

Query: 1021 IIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVRAPRQKPADLLQ 1080
            IIDAQ ND YLVEKRGLAEAGQAVEFS SSDGGLLFERRLCVPSDSAV+      A    
Sbjct: 1239 IIDAQGNDHYLVEKRGLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHSSP 1298

Query: 1081 PLSVPEWKWENVSMDFITGL------------------PRTLRGFIVIWVVVDRLTKLAH 1140
                P  K E  +  FIT L                    TLRGF VIWVVVDRLTK +H
Sbjct: 1299 VSMHPGTKAE--TSGFITTLEHTGMEVGKRVHGFHYRTAETLRGFTVIWVVVDRLTKSSH 1358

Query: 1141 FVPGKSTYTASKWVQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQTAMGTRLDFSTA 1200
            FV  KSTYTASKW QLYMSEIVRLH VPVSIVSDRDARFT KFWKGLQTAMGTRLDFSTA
Sbjct: 1359 FVLCKSTYTASKWAQLYMSEIVRLHCVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA 1418

Query: 1201 FHPQTDGQTERLNQVLEDMLQACALEFPGSWDSHLHLMEFAYINSFQATIGMAPFEALYG 1260
            FH QTDGQTERLNQVLEDML+ACALEFPGSWDSHLHLMEFAY NS+QATIGMAPFEALYG
Sbjct: 1419 FHLQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 1478

Query: 1261 KCCRSPICWGE-------------STNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFDVG 1320
            KCCRSP+CWGE             STNEAIQKIRSRMHTAQSRQKSYADVRRKDLEF+VG
Sbjct: 1479 KCCRSPVCWGEVGEQRLMGPELVLSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVG 1538

Query: 1321 DKVFLKVAPMKGVLRFEKREKLSPHFVGPFEILERIGPVAYRLALPPSLSVVHDVFHVSM 1331
            DKVFLKVAPM+GVLRFE+R KLSP FVGPFEILERIGPVAYRLALPPSLS VHDVFHVSM
Sbjct: 1539 DKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSM 1598

[Close]
BLAST of IVF0017494 vs. ExPASy TrEMBL
Match: A0A5A7UAA8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00800 PE=4 SV=1)

HSP 1 Score: 2239.2 bits (5801), Expect = 0.0e+00
Identity = 1173/1517 (77.32%), Postives = 1219/1517 (80.36%), Query Frame = 0 

Query: 1    MPPRRSARRDGQGGGGIGAGCVQPEVQPVTQATDPTVPVTHADLAAMEQRFRDLIMQMRK 60
            MPPRR ARR G+GG G GAG VQPE +P +    P                         
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPE-KPASPTPAPA------------------------ 60

Query: 61   QQQPAP-PAPALASAPVPVVPQVVSDQLSAEAKHLKDFRKYNPTTFDGYLKDPTRAQLWL 120
               PAP P PA A A VPV PQ V DQLSAEAKHL+DFRKYNPTTFDG L+DPTRAQ+WL
Sbjct: 61   -PAPAPAPVPAPAPALVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWL 120

Query: 121  SSLETIFRYMKCPEDQKVRCAVFMLTDRGTAWWETTERMLGGDVGQITWQQFKESFYAKF 180
            SSLETIFRYMKCPEDQKV+CAVFMLTDRGTAWWETTERMLGGDV QITWQQFKESFYAKF
Sbjct: 121  SSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKF 180

Query: 181  FSASLRDAK-------------------------RFGSSLPTRHSCR------------- 240
            FSASLRDAK                         RF   +    + R             
Sbjct: 181  FSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQ 240

Query: 241  -------------CTALAVDLSLQERANSSKVAGRGSTSGQKRKAEQQPTSVPQRNFRSG 300
                            LAVDLSLQE ANSSK AGRGSTSGQKRKAEQQP  VPQRNFRSG
Sbjct: 241  GLVRAFRPATHADALRLAVDLSLQEMANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRSG 300

Query: 301  GEFRRFQQKPFEAGEATRGKPLCTTCGKHHLGRCLFGTRICFKCRQEGHTADRCPMRLIG 360
            GEFR FQQKPFEAGEA RGKPLCTTCGKHHLGRCLFGTR CFKCRQEGHTADRCP+RL G
Sbjct: 301  GEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTG 360

Query: 361  NAQNQRAGAPHQGKVFATNKTEAEREGMVMTSTLPVLGHYALVLFD-------------- 420
             AQNQ AGAPHQG+VFATN+TEAE+ G V+T TLPVLGHYALVLFD              
Sbjct: 361  IAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAFVS 420

Query: 421  -------------SVSTPSGECMLSKEKVKGCQIEITGHVIEVTLLVLDMLDFDVILGMN 480
                         SVSTPSGECMLS+EKVK CQIEI GHVIEVTL+VLDMLDFDVILGM+
Sbjct: 421  HARLEVEPLHHVLSVSTPSGECMLSREKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMD 480

Query: 481  WLAANHASINCFRKEVTFNPPSMASFKFKGEGSRSLPQVISAMRASKLLSQGTWSILASL 540
            WLAANHASI+C RK+VTFNPPSMASFKFKG GS+SLPQVISA+RASKLLSQGTW ILAS+
Sbjct: 481  WLAANHASIDCSRKDVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASV 540

Query: 541  VDTREVDISLSSEPVVRDYLDVFPEELPGLPPHREIEFVIKLEPGTVPIFRAPYRMATVE 600
            VDTRE D+SLSSEPVVRDY DVFPEELPGLPPHRE+EF I+LEPGTVPI RAPYRMA  E
Sbjct: 541  VDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAE 600

Query: 601  LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 660
            LKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR
Sbjct: 601  LKELKVQLQELLDKGFIRPNVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 660

Query: 661  IDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFCSRYGHYEFIVMSFGLTNAPAV 720
            IDDLFDQLQGATVFSKIDLRSGY+QLRIKD DVPKT F SRYGHYEFIVMSFGLTNAPAV
Sbjct: 661  IDDLFDQLQGATVFSKIDLRSGYNQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAV 720

Query: 721  FMDLINRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM-------------------- 780
            FMDL+NRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM                    
Sbjct: 721  FMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFW 780

Query: 781  ---VSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLAGYYRWFVENFSRIAT 840
               VSFLGHVVSKA VSVDPAKIEAVT W RPSTVSEVRSFLGLAGYYR FVENFSRIAT
Sbjct: 781  LKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT 840

Query: 841  PLTQLTRKGAPFVWSKACEDSFQSLKQKLVTTPVLTVPDGSGSFVIYSDASKKDLGSVLM 900
            PLTQLTRKGAPFVWSKACEDSFQ+LKQKLVT PVLTVPDGSGSFVIYSDASKK LG VLM
Sbjct: 841  PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 900

Query: 901  QQGK--------LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFT 960
            QQGK        LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFT+HKSLKYFFT
Sbjct: 901  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 960

Query: 961  QKELIMRQRRWLELVKDYDCEILYHPGKANVIADALSRK-----------ALLHQDLERA 1020
            QKEL MRQRRWLELVKDYDCEILYHPGKANV+ADALSRK           A LH+DLERA
Sbjct: 961  QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 1020

Query: 1021 EIAVSVGAVTMQLAQLTVQSTLRQKIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLL 1080
            EIAVSVGAVTMQLAQLTVQ TLRQ+IIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGL 
Sbjct: 1021 EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLS 1080

Query: 1081 FERRLCVPSDSAVRA--------------------------------------------- 1140
            FE RLCVPSDSAV+                                              
Sbjct: 1081 FEGRLCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCL 1140

Query: 1141 -------PRQKPADLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHF 1200
                   PRQKPA LLQPLS+PEWKWENVSMDFITGLPRTLRGF VIWVVVDRLTK AHF
Sbjct: 1141 VCQQVKEPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHF 1200

Query: 1201 VPGKSTYTASKWVQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQTAMGTRLDFSTAF 1260
            VPGKSTYTASKW QLYMSEIVRLHGVPVSIVSDRDARFT KFWKGLQTAMGTRLDFSTAF
Sbjct: 1201 VPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAF 1260

Query: 1261 HPQTDGQTERLNQVLEDMLQACALEFPGSWDSHLHLMEFAYINSFQATIGMAPFEALYGK 1320
            HPQ DGQTERLNQVLEDML+ACALEFPGSWDSHLHLMEFAY NS+QATIGMAPFEALYGK
Sbjct: 1261 HPQADGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGK 1320

Query: 1321 CCRSPICWGE-------------STNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFDVGD 1332
            CCRSP+CWGE             STNEAIQKIRSRMHTAQSRQKSYADVRRKDLEF++ D
Sbjct: 1321 CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIRD 1380

[Close]
BLAST of IVF0017494 vs. ExPASy TrEMBL
Match: A0A5A7TGX4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold529G00100 PE=4 SV=1)

HSP 1 Score: 2238.0 bits (5798), Expect = 0.0e+00
Identity = 1165/1489 (78.24%), Postives = 1213/1489 (81.46%), Query Frame = 0 

Query: 1    MPPRRSARRDGQGGGGIGAGCVQPEVQPVTQATDPTVPVTHADLAAMEQRFRDLIMQMRK 60
            MPPRR ARR G+GG G GAG VQPEVQPV QA DP  PVTHADLAAMEQRFRDLIMQMR+
Sbjct: 89   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 148

Query: 61   QQQPA------------PPAPALASAPVPVVPQVVSDQLSAEAKHLKDFRKYNPTTFDGY 120
            QQ+PA             PAPA   APVPV PQ V DQLSAEAKHL+DFRKYNPTTFDG 
Sbjct: 149  QQKPASPTPAPSPAPAPAPAPAPVPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 208

Query: 121  LKDPTRAQLWLSSLETIFRYMKCPEDQKVRCAVFMLTDRGTAWWETTERMLGGDVGQITW 180
            L+DPTRAQ+WLSSLETIFRYMKCPEDQKV+CAVFMLTDRGTAWWETTERMLGGDV QITW
Sbjct: 209  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 268

Query: 181  QQFKESFYAKFFSASLRDAK-------------------------RFGSSLPTRHSCR-- 240
            QQFKESFYAKFFSASLRDAK                         RF   +    + R  
Sbjct: 269  QQFKESFYAKFFSASLRDAKQQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 328

Query: 241  ------------------------CTALAVDLSLQERANSSKVAGRGSTSGQKRKAEQQP 300
                                       LAVDLSLQERANSSK AGRGSTSGQKRKAEQ P
Sbjct: 329  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGRGSTSGQKRKAEQHP 388

Query: 301  TSVPQRNFRSGGEFRRFQQKPFEAGEATRGKPLCTTCGKHHLGRCLFGTRICFKCRQEGH 360
              VPQRNFR GGEFRRFQQKPFEAGEA RGKPLCTTCGKHHLGRCLF TR CFKCRQEGH
Sbjct: 389  VPVPQRNFRPGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFETRTCFKCRQEGH 448

Query: 361  TADRCPMRLIGNAQNQRAGAPHQGKVFATNKTEAEREGMVMTSTLPVLGHYALVLFDSVS 420
            TADRCP+RL GNAQNQ AGAPHQG+VFATNKTE E+ G V+T TLPVLGHYALVLFDS S
Sbjct: 449  TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEVEKAGTVVTGTLPVLGHYALVLFDSGS 508

Query: 421  TPSGECMLSKEKV--KGCQIEITGHVIEVTLLVLDMLDFDVILGMNWLAANHASINCFRK 480
            + S    +S   V     +IEI GHVIEVTL+VLDMLDFDVILGM+WLAANHASI+C RK
Sbjct: 509  SHS---FISSAFVLHARLEIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRK 568

Query: 481  EVTFNPPSMASFKFKGEGSRSLPQVISAMRASKLLSQGTWSILASLVDTREVDISLSSEP 540
            EVTFNPPS+ASFKFKG GS+SLPQVISA+RASKLL+QGTW IL S+VDTREVD+SLSSEP
Sbjct: 569  EVTFNPPSLASFKFKGGGSKSLPQVISAIRASKLLNQGTWGILVSVVDTREVDVSLSSEP 628

Query: 541  VVRDYLDVFPEELPGLPPHREIEFVIKLEPGTVPIFRAPYRMATVELKELKVQLQELLDK 600
            VVRDY DVFP+ELPGLPPHRE+EF I+LEPGTVPI RAPYRMA  ELKELKVQLQELLDK
Sbjct: 629  VVRDYPDVFPDELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDK 688

Query: 601  GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVF 660
            GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVF
Sbjct: 689  GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVF 748

Query: 661  SKIDLRSGYHQLRIKDGDVPKTTFCSRYGHYEFIVMSFGLTNAPAVFMDLINRVFREFLD 720
            S+IDLRSGYHQLRIKD DVPKT F SRYGHYEFIVMSFGLTNAPAVFMDL+NRVFREFLD
Sbjct: 749  SEIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLD 808

Query: 721  TFVIVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKA 780
            TFVIVFIDDILIYSKTEAEHEEHLRM                       VSFLGHVVSKA
Sbjct: 809  TFVIVFIDDILIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKA 868

Query: 781  GVSVDPAKIEAVTSWPRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVW 840
            GVSVDPAKIEAVT W RPSTVSEVRSFLGLAGYYR FVENFSRIATPLTQLTRKGAPFVW
Sbjct: 869  GVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYRQFVENFSRIATPLTQLTRKGAPFVW 928

Query: 841  SKACEDSFQSLKQKLVTTPVLTVPDGSGSFVIYSDASKKDLGSVLMQQGK--------LK 900
            SKACEDSFQ+LKQKLVT PVLTV DGSGSFVIYSDASKK LG VLMQQGK        LK
Sbjct: 929  SKACEDSFQNLKQKLVTAPVLTVRDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLK 988

Query: 901  SHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELIMRQRRWLEL 960
            SHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFT+HKSLKYFFTQKEL MRQRRWLEL
Sbjct: 989  SHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLEL 1048

Query: 961  VKDYDCEILYHPGKANVIADALSRK-----------ALLHQDLERAEIAVSVGAVTMQLA 1020
            VKDYDCEILYHPGKANV+ADALSRK           A LH+DLERAEIAVSVGAVTMQLA
Sbjct: 1049 VKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLA 1108

Query: 1021 QLTVQSTLRQKIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSA-- 1080
            QLTVQ TLRQ+IIDAQSNDPYLVEKRGLAEAGQA EFS+SSDGGLLFER LCVPSDSA  
Sbjct: 1109 QLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERHLCVPSDSAVK 1168

Query: 1081 --------------------------------------------------VRAPRQKPAD 1140
                                                              V+APRQKPA 
Sbjct: 1169 TELLSEAHSSPFSMHPGSTKMYQDLKRVYWWHNMKREVAEFVSRCLVCQQVKAPRQKPAG 1228

Query: 1141 LLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFVPGKSTYTASKWVQ 1200
            LLQPLS+PEWKWENVSMDFITGLPRTLRGF VIWVVVDRLTKLAHFVPGKSTYTASKW Q
Sbjct: 1229 LLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKLAHFVPGKSTYTASKWAQ 1288

Query: 1201 LYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQV 1260
            LYMSEIVRLHGVPVSIVS+RDARFT KFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQV
Sbjct: 1289 LYMSEIVRLHGVPVSIVSNRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQV 1348

Query: 1261 LEDMLQACALEFPGSWDSHLHLMEFAYINSFQATIGMAPFEALYGKCCRSPICWGESTNE 1320
            LEDML+ACALEFPGSWDSHLHLMEFAY NS+QATIGMAPFEALYGKCCRSP+CWGE    
Sbjct: 1349 LEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE---- 1408

Query: 1321 AIQKIRSRMHTAQSRQKSYADVRRKDLEFDVGDKVFLKVAPMKGVLRFEKREKLSPHFVG 1331
                                DVRRKDLEF+VGDKVFLKVAPM+GVLRFE+R KLSP FVG
Sbjct: 1409 -------------------VDVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG 1468

[Close]
BLAST of IVF0017494 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2322 bits (6018), Expect = 0.0
Identity = 1204/1498 (80.37%), Postives = 1247/1498 (83.24%), Query Frame = 0 

Query: 1    MPPRRSARRDGQGGGGIGAGCVQPEVQPVTQATDPTVPVTHADLAAMEQRFRDLIMQMRK 60
            MPPRR ARR G+GG G GAG VQPEVQPV QA DP  PVTHADLAAMEQRFRDLIMQMR+
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60

Query: 61   QQQPAPP------------APALASAPVPVVPQVVSDQLSAEAKHLKDFRKYNPTTFDGY 120
            QQ+PA P            APA A APVPV PQ V DQLSAEAKHL+DFRKYNPTTFDG 
Sbjct: 61   QQKPASPTPAPAPAPAPAPAPAPALAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121  LKDPTRAQLWLSSLETIFRYMKCPEDQKVRCAVFMLTDRGTAWWETTERMLGGDVGQITW 180
            L+DPTRAQ+WLSSLETIFRYMKCPEDQKV+CAVFMLTDRGTAWWETTERMLGGDV QITW
Sbjct: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 181  QQFKESFYAKFFSASLRDAKR-------------------------FGSSLPTRHSCRCT 240
            QQFKESFYAKFFSASLRDAKR                         F   +    + R  
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241  A--------------------------LAVDLSLQERANSSKVAGRGSTSGQKRKAEQQP 300
                                       LAVDLSLQERANSSK AGRG TSGQKRKAEQQP
Sbjct: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQP 300

Query: 301  TSVPQRNFRSGGEFRRFQQKPFEAGEATRGKPLCTTCGKHHLGRCLFGTRICFKCRQEGH 360
              VPQRNFRSGGEFRRFQQKPFEAGEA R KPLCT CGKHHLGRCLFGTR CFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRRFQQKPFEAGEAARWKPLCTICGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 361  TADRCPMRLIGNAQNQRAGAPHQGKVFATNKTEAEREGMVMTSTLPVLGHYALVLFDSVS 420
            TADRCP+RL GNAQNQ AGAPHQG+VFATNKTEAE+ G V+T TLPVLGHYALVLFDSVS
Sbjct: 361  TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSVS 420

Query: 421  TPSGECMLSKEKVKGCQIEITGHVIEVTLLVLDMLDFDVILGMNWLAANHASINCFRKEV 480
            TPSGECMLSKEKVK CQIEI GHVIEVTLLVLDMLDFDVILGM+WLAA+HASI+C RKEV
Sbjct: 421  TPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAAHHASIDCSRKEV 480

Query: 481  TFNPPSMASFKFKGEGSRSLPQVISAMRASKLLSQGTWSILASLVDTREVDISLSSEPVV 540
            TFNPPS ASFKFKG GSRSLPQVISA+RASKLLSQGTW ILAS+VDTRE D+SLSSEPVV
Sbjct: 481  TFNPPSRASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVV 540

Query: 541  RDYLDVFPEELPGLPPHREIEFVIKLEPGTVPIFRAPYRMATVELKELKVQLQELLDKGF 600
            RDY DVFPEELPGLPPHRE+EF I+LEPGTVPI RAPYRMA  ELKELKVQLQELLDKGF
Sbjct: 541  RDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGF 600

Query: 601  IRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSK 660
            IRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSK
Sbjct: 601  IRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSK 660

Query: 661  IDLRSGYHQLRIKDGDVPKTTFCSRYGHYEFIVMSFGLTNAPAVFMDLINRVFREFLDTF 720
            IDLRSGYHQLRIKD DVPKT F SRYGHYEFIVMSFGLTNAPAVFMDL+NRVFREFLDTF
Sbjct: 661  IDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTF 720

Query: 721  VIVFIDDILIYSKTEAEHEEHLRMV-----------------------SFLGHVVSKAGV 780
            VIVFIDDILIYSKTEAEHEEHLRMV                       SFLGHVVSKAGV
Sbjct: 721  VIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGV 780

Query: 781  SVDPAKIEAVTSWPRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSK 840
            SVDPAKIEAVT W RPSTVSEVRSFLGLAGYYR FVENFSRIATPLTQLTRKGAPFVWSK
Sbjct: 781  SVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK 840

Query: 841  ACEDSFQSLKQKLVTTPVLTVPDGSGSFVIYSDASKKDLGSVLMQQGK--------LKSH 900
            ACEDSFQ+LKQKLVT PVLTVPDGSGSFVIYSDASKK LG VLMQQGK        LKSH
Sbjct: 841  ACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSH 900

Query: 901  EQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELIMRQRRWLELVK 960
            EQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFT+HKSLKYFFTQKEL MRQRRWLELVK
Sbjct: 901  EQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVK 960

Query: 961  DYDCEILYHPGKANVIADALSRK-----------ALLHQDLERAEIAVSVGAVTMQLAQL 1020
            DYDCEILYHPGKANV+ADALSRK           A LH+DLERAEIAVSVGAVTMQLAQL
Sbjct: 961  DYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL 1020

Query: 1021 TVQSTLRQKIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVR-- 1080
            TVQ TLRQ+IIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDS V+  
Sbjct: 1021 TVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKTE 1080

Query: 1081 --------------------------------------------------APRQKPADLL 1140
                                                              APRQKPA LL
Sbjct: 1081 LLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLL 1140

Query: 1141 QPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFVPGKSTYTASKWVQLY 1200
            QPLS+PEWKWENVSMDFITGLPRTLRGF VIWVVVDRLTK AHFVPGKSTYTASKW QLY
Sbjct: 1141 QPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLY 1200

Query: 1201 MSEIVRLHGVPVSIVSDRDARFTFKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLE 1260
            MSEIVRLHGVPVSIVSDRDARFT KFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE
Sbjct: 1201 MSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTAMGTRLDFSTAFHPQTDGQTERLNQVLE 1260

Query: 1261 DMLQACALEFPGSWDSHLHLMEFAYINSFQATIGMAPFEALYGKCCRSPICWGE------ 1320
             ML+ACALEFPGSWDSHLHLMEF Y NS+QATIGMAPFEALYGKCCRSP+CWGE      
Sbjct: 1261 YMLRACALEFPGSWDSHLHLMEFVYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRL 1320

Query: 1321 -------STNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFDVGDKVFLKVAPMKGVLRFE 1328
                   STNEAIQKIRSRMHTAQSRQKSYADVRRKDLEF+VGDKVFLKVAPM+GVLRFE
Sbjct: 1321 MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFE 1380

[Close]
BLAST of IVF0017494 vs. NCBI nr
Match: KAA0053234.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 2248 bits (5824), Expect = 0.0
Identity = 1171/1489 (78.64%), Postives = 1218/1489 (81.80%), Query Frame = 0 

Query: 1    MPPRRSARRDGQGGGGIGAGCVQPEVQPVTQATDPTVPVTHADLAAMEQRFRDLIMQMRK 60
            MPPRR ARR G+GG G GAG VQPEVQPV QA DP  PVTHADLAAMEQRF+DLIMQMR+
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFKDLIMQMRE 60

Query: 61   QQQPAPPAPALASAP------------VPVVPQVVSDQLSAEAKHLKDFRKYNPTTFDGY 120
            QQ+PA PAPA A AP            VPV PQVV DQLSAEAKHL+DFRKYNPTTFDG 
Sbjct: 61   QQKPASPAPAPAPAPAPVPAPAPAPAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121  LKDPTRAQLWLSSLETIFRYMKCPEDQKVRCAVFMLTDRGTAWWETTERMLGGDVGQITW 180
            L+DPTRAQLWLSSLETIFRYMKCPED KV+CAVFMLTDRGTAWWETTERMLGGDV QITW
Sbjct: 121  LEDPTRAQLWLSSLETIFRYMKCPEDPKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 181  QQFKESFYAKFFSASLRDAKR-------------------------FGSSLPTRHSCRCT 240
            QQFKESFYAKFFSASLRDAKR                         F   +    + R  
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241  A--------------------------LAVDLSLQERANSSKVAGRGSTSGQKRKAEQQP 300
                                       LAVDLSLQERANSSK AGRGSTSGQKRKAEQQP
Sbjct: 241  KFVRGLWLDIQGLVRAFRPPTHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300

Query: 301  TSVPQRNFRSGGEFRRFQQKPFEAGEATRGKPLCTTCGKHHLGRCLFGTRICFKCRQEGH 360
              VPQRNFRSGGEFRRFQQKPFEAGEA RGKPLCTTCGKHHLGRCLFGTR CFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 361  TADRCPMRLIGNAQNQRAGAPHQGKVFATNKTEAEREGMVMTSTLPVLGHYALVLFDSVS 420
            TADRCP+RL GNA NQ AGAPHQG+VFATNKTEAE+ G V+T   P+  H+ L    SVS
Sbjct: 361  TADRCPLRLTGNAPNQGAGAPHQGRVFATNKTEAEKAGTVVTEVEPL--HHVL----SVS 420

Query: 421  TPSGECMLSKEKVKGCQIEITGHVIEVTLLVLDMLDFDVILGMNWLAANHASINCFRKEV 480
            TPSGECMLSKE+VK CQIEI GHVIEVTLLVLDMLDFDVILGM+WLAANHASI+C RKEV
Sbjct: 421  TPSGECMLSKERVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEV 480

Query: 481  TFNPPSMASFKFKGEGSRSLPQVISAMRASKLLSQGTWSILASLVDTREVDISLSSEPVV 540
            TFNPPSMASFKFKG GS+SLPQVISA++ASKLLSQGTW ILAS+VDTRE D+SLSSEPVV
Sbjct: 481  TFNPPSMASFKFKGGGSKSLPQVISAIKASKLLSQGTWGILASVVDTREADVSLSSEPVV 540

Query: 541  RDYLDVFPEELPGLPPHREIEFVIKLEPGTVPIFRAPYRMATVELKELKVQLQELLDKGF 600
            RDY DVFPEELPGLPPHRE+EF I+LE GTVPI RAPYRMA  ELKELKVQLQELLDKGF
Sbjct: 541  RDYSDVFPEELPGLPPHREVEFAIELESGTVPISRAPYRMAPAELKELKVQLQELLDKGF 600

Query: 601  IRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSK 660
            IRPSVSPWGAPVLFVKKKDGSMRLCID RELNKVTVKNRYPLPRIDDLFDQLQGATVFSK
Sbjct: 601  IRPSVSPWGAPVLFVKKKDGSMRLCIDNRELNKVTVKNRYPLPRIDDLFDQLQGATVFSK 660

Query: 661  IDLRSGYHQLRIKDGDVPKTTFCSRYGHYEFIVMSFGLTNAPAVFMDLINRVFREFLDTF 720
            IDLRSGYHQLRIKDGDVPKT F SRYGHYEFIVMSFGLTNAPAVFMDL+NRVFREFLDTF
Sbjct: 661  IDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTF 720

Query: 721  VIVFIDDILIYSKTEAEHEEHLRMV-----------------------SFLGHVVSKAGV 780
            VIVFIDDILIYSKTEAEHEEHLRMV                       SFLGHVVSKAGV
Sbjct: 721  VIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGV 780

Query: 781  SVDPAKIEAVTSWPRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSK 840
            SVDPAKIEAVT W RPSTVSEVRSFLGLAGYYR FVENFSRIATPLTQLTRKGAPFVWSK
Sbjct: 781  SVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK 840

Query: 841  ACEDSFQSLKQKLVTTPVLTVPDGSGSFVIYSDASKKDLGSVLMQQGK--------LKSH 900
            ACEDSFQ+LKQKLVT PVLTVP+GSGSFVIYSDA KK LG VLMQQGK        LKSH
Sbjct: 841  ACEDSFQNLKQKLVTAPVLTVPNGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSH 900

Query: 901  EQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELIMRQRRWLELVK 960
            EQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFT+HKSLKYFFTQKEL MRQRRWLELVK
Sbjct: 901  EQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVK 960

Query: 961  DYDCEILYHPGKANVIADALSRKALLHQDLERAEIAVSVGAVTMQLAQLTVQSTLRQKII 1020
            DYDCEILYHPGKANV+ADALSRK                      LAQLTVQ TLRQ+II
Sbjct: 961  DYDCEILYHPGKANVVADALSRK----------------------LAQLTVQPTLRQRII 1020

Query: 1021 DAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVR------------- 1080
            DAQSNDPYLVEKRGLAE  QAVEFS+SSDGGLLFERRLCVPSD AV+             
Sbjct: 1021 DAQSNDPYLVEKRGLAETRQAVEFSLSSDGGLLFERRLCVPSDRAVKTELLSEAHSSPFS 1080

Query: 1081 ---------------------------------------APRQKPADLLQPLSVPEWKWE 1140
                                                   APRQKPA LLQPLS+PEWKWE
Sbjct: 1081 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 1140

Query: 1141 NVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFVPGKSTYTASKWVQLYMSEIVRLHGVP 1200
            NVSMDFITGLPRTL+GF VIWVVVDRLTK AHF+PGKSTYTASKW QLYMSEIVRLHGVP
Sbjct: 1141 NVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFLPGKSTYTASKWAQLYMSEIVRLHGVP 1200

Query: 1201 VSIVSDRDARFTFKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLQACALEFP 1260
            VSIVSDRDAR T KFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDML+ACALEFP
Sbjct: 1201 VSIVSDRDARSTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 1260

Query: 1261 GSWDSHLHLMEFAYINSFQATIGMAPFEALYGKCCRSPICWGE-------------STNE 1320
            GSWDSHLHLMEFAY NS+QATIGMAPFEALYGKCCRSP+CW E             STNE
Sbjct: 1261 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNE 1320

Query: 1321 AIQKIRSRMHTAQSRQKSYADVRRKDLEFDVGDKVFLKVAPMKGVLRFEKREKLSPHFVG 1330
            AIQKI+SRM TAQSRQKSYADVRRKDLEF+VGDKVFLKVAPM+GVLRFE+R KLS HFVG
Sbjct: 1321 AIQKIKSRMRTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSSHFVG 1380

[Close]
BLAST of IVF0017494 vs. NCBI nr
Match: KAA0040871.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 2243 bits (5811), Expect = 0.0
Identity = 1179/1458 (80.86%), Postives = 1221/1458 (83.74%), Query Frame = 0 

Query: 1    MPPRRSARRDGQGGGGIGAGCVQPEVQPVTQATDPTVPVTHADLAAMEQRFRDLIMQMRK 60
            MPPRR ARR G+GG G  AG VQPEVQPV QATDP  PVTHADLAAMEQRFRDLIMQMR+
Sbjct: 219  MPPRRGARRGGRGGRGRRAGRVQPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMRE 278

Query: 61   QQQPAPPAPALASAP--------VPVVPQVVSDQLSAEAKHLKDFRKYNPTTFDGYLKDP 120
            QQQ APPAPA ASAP        VPV PQVVSDQLS EAKHL+DFRKYNPTTFDG L+DP
Sbjct: 279  QQQSAPPAPAPASAPAPAPASAPVPVAPQVVSDQLSTEAKHLRDFRKYNPTTFDGSLEDP 338

Query: 121  TRAQLWLSSLETIFRYMKCPEDQKVRCAVFMLTDRGTAWWETTERMLGGDVGQITWQQFK 180
            TRAQLWLSSLETIFRYMKCPEDQKV+CAVFM TDRGTAWWET ERMLGGDV QITWQQFK
Sbjct: 339  TRAQLWLSSLETIFRYMKCPEDQKVQCAVFMFTDRGTAWWETAERMLGGDVSQITWQQFK 398

Query: 181  ESFYAKFFSASLRDAKRF-------GSSLPTRHSCR------------CTALAVDLSLQE 240
            ESFYAKFFSASLRDAKR        G     ++                T  A   +LQE
Sbjct: 399  ESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARANNLQE 458

Query: 241  RANSSKVAGRGSTSGQKRKAEQQPTSVPQRNFRSGGEFRRFQQKPFEAGEATRGKPLCTT 300
              NSSK AGRGSTSGQKRKAEQQ   VPQRNFRSGGEFRRFQQKPFEAGEA RGK LCTT
Sbjct: 459  GVNSSKTAGRGSTSGQKRKAEQQSVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKSLCTT 518

Query: 301  CGKHHLGRCLFGTRICFKCRQEGHTADRCPMRLIGNAQNQRAGAPHQGKVFATNKTEAER 360
            CGKHHLGRCLFGTR CFKCRQEGHTADRCP+RL GNAQNQ AGAPHQG+VFATNKTEAER
Sbjct: 519  CGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAER 578

Query: 361  EGMVMTSTLPVLGHYALVLFDS---------------------------VSTPSGECMLS 420
             G V+T TLPVLGHYALVLFDS                           VSTPSGECMLS
Sbjct: 579  AGTVVTGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLS 638

Query: 421  KEKVKGCQIEITGHVIEVTLLVLDMLDFDVILGMNWLAANHASINCFRKEVTFNPPSMAS 480
            KEKVK CQIEI GHVIEVTLLVLDMLDFDVILGM+WLAANHASI+C RKEVTFNP SMAS
Sbjct: 639  KEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPHSMAS 698

Query: 481  FKFKGEGSRSLPQVISAMRASKLLSQGTWSILASLVDTREVDISLSSEPVVRDYLDVFPE 540
            FKFKGEGSRSLPQVISA+RASKLLSQGTW ILAS+VDTREVD+SLSSEPVVRDY DVFPE
Sbjct: 699  FKFKGEGSRSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPE 758

Query: 541  ELPGLPPHREIEFVIKLEPGTVPIFRAPYRMATVELKELKVQLQELLDKGFIRPSVSPWG 600
            ELPGLPPHRE+EF I+LEPGTVPI RAPY+MA  ELKELKVQLQELLDKGFIRPSVSPWG
Sbjct: 759  ELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWG 818

Query: 601  APVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQ 660
            APVLFVKKKDGSMRLCIDYRELNKVTVKN+YPLP+IDDLFDQLQGATVFSKIDLRSGYHQ
Sbjct: 819  APVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPKIDDLFDQLQGATVFSKIDLRSGYHQ 878

Query: 661  LRIKDGDVPKTTFCSRYGHYEFIVMSFGLTNAPAVFMDLINRVFREFLDTFVIVFIDDIL 720
            LRIKDGDVPKT F SRYGHYEFIVMSFGLTNAPAVFMDL+NRVFREFLDTFVIVFIDDIL
Sbjct: 879  LRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIL 938

Query: 721  IYSKTEAEHEEHLRMV-----------------------SFLGHVVSKAGVSVDPAKIEA 780
            IYSKTEAEHEEHLR+V                       SFLGHVVSKAGVSVDPAKIEA
Sbjct: 939  IYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEA 998

Query: 781  VTSWPRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQSL 840
            VT W RPSTVSEVRSFLGLAGYYR FVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ+L
Sbjct: 999  VTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNL 1058

Query: 841  KQKLVTTPVLTVPDGSGSFVIYSDASKKDLGSVLMQQGK--------LKSHEQNYPTHDL 900
            KQKLVT  VLTVPDGSGSFVIYSDAS K LG VLMQQGK        LKSHEQNYPTHDL
Sbjct: 1059 KQKLVTALVLTVPDGSGSFVIYSDASMKGLGCVLMQQGKVVAFASRQLKSHEQNYPTHDL 1118

Query: 901  ELAAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYH 960
            ELAAVVFALKIWRHYLYGEKIQIFT+HKSLKYFFTQKE  MRQRRWLELVKDYDCEILYH
Sbjct: 1119 ELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKEFNMRQRRWLELVKDYDCEILYH 1178

Query: 961  PGKANVIADALSRK-----------ALLHQDLERAEIAVSVGAVTMQLAQLTVQSTLRQK 1020
            PGKANV+ADALSRK           A LH+DLERAEIAVSVGAVTMQLAQLTVQ TLRQ+
Sbjct: 1179 PGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQR 1238

Query: 1021 IIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVRAPRQKPADLLQ 1080
            IIDAQ ND YLVEKRGLAEAGQAVEFS SSDGGLLFERRLCVPSDSAV+      A    
Sbjct: 1239 IIDAQGNDHYLVEKRGLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKTELLSEAHS-S 1298

Query: 1081 PLSV-PEWKWENVSMDFITGLPRT------------------LRGFIVIWVVVDRLTKLA 1140
            P+S+ P  K E  +  FIT L  T                  LRGF VIWVVVDRLTK +
Sbjct: 1299 PVSMHPGTKAE--TSGFITTLEHTGMEVGKRVHGFHYRTAETLRGFTVIWVVVDRLTKSS 1358

Query: 1141 HFVPGKSTYTASKWVQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQTAMGTRLDFST 1200
            HFV  KSTYTASKW QLYMSEIVRLH VPVSIVSDRDARFT KFWKGLQTAMGTRLDFST
Sbjct: 1359 HFVLCKSTYTASKWAQLYMSEIVRLHCVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST 1418

Query: 1201 AFHPQTDGQTERLNQVLEDMLQACALEFPGSWDSHLHLMEFAYINSFQATIGMAPFEALY 1260
            AFH QTDGQTERLNQVLEDML+ACALEFPGSWDSHLHLMEFAY NS+QATIGMAPFEALY
Sbjct: 1419 AFHLQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY 1478

Query: 1261 GKCCRSPICWGE-------------STNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFDV 1320
            GKCCRSP+CWGE             STNEAIQKIRSRMHTAQSRQKSYADVRRKDLEF+V
Sbjct: 1479 GKCCRSPVCWGEVGEQRLMGPELVLSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEV 1538

Query: 1321 GDKVFLKVAPMKGVLRFEKREKLSPHFVGPFEILERIGPVAYRLALPPSLSVVHDVFHVS 1330
            GDKVFLKVAPM+GVLRFE+R KLSP FVGPFEILERIGPVAYRLALPPSLS VHDVFHVS
Sbjct: 1539 GDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVS 1598

[Close]
BLAST of IVF0017494 vs. NCBI nr
Match: KAA0040695.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2234 bits (5790), Expect = 0.0
Identity = 1165/1489 (78.24%), Postives = 1213/1489 (81.46%), Query Frame = 0 

Query: 1    MPPRRSARRDGQGGGGIGAGCVQPEVQPVTQATDPTVPVTHADLAAMEQRFRDLIMQMRK 60
            MPPRR ARR G+GG G GAG VQPEVQPV QA DP  PVTHADLAAMEQRFRDLIMQMR+
Sbjct: 89   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 148

Query: 61   QQQPAPP------------APALASAPVPVVPQVVSDQLSAEAKHLKDFRKYNPTTFDGY 120
            QQ+PA P            APA   APVPV PQ V DQLSAEAKHL+DFRKYNPTTFDG 
Sbjct: 149  QQKPASPTPAPSPAPAPAPAPAPVPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 208

Query: 121  LKDPTRAQLWLSSLETIFRYMKCPEDQKVRCAVFMLTDRGTAWWETTERMLGGDVGQITW 180
            L+DPTRAQ+WLSSLETIFRYMKCPEDQKV+CAVFMLTDRGTAWWETTERMLGGDV QITW
Sbjct: 209  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 268

Query: 181  QQFKESFYAKFFSASLRDAK-------------------------RFGSSLPTRHSCRCT 240
            QQFKESFYAKFFSASLRDAK                         RF   +    + R  
Sbjct: 269  QQFKESFYAKFFSASLRDAKQQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 328

Query: 241  A--------------------------LAVDLSLQERANSSKVAGRGSTSGQKRKAEQQP 300
                                       LAVDLSLQERANSSK AGRGSTSGQKRKAEQ P
Sbjct: 329  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGRGSTSGQKRKAEQHP 388

Query: 301  TSVPQRNFRSGGEFRRFQQKPFEAGEATRGKPLCTTCGKHHLGRCLFGTRICFKCRQEGH 360
              VPQRNFR GGEFRRFQQKPFEAGEA RGKPLCTTCGKHHLGRCLF TR CFKCRQEGH
Sbjct: 389  VPVPQRNFRPGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFETRTCFKCRQEGH 448

Query: 361  TADRCPMRLIGNAQNQRAGAPHQGKVFATNKTEAEREGMVMTSTLPVLGHYALVLFDSVS 420
            TADRCP+RL GNAQNQ AGAPHQG+VFATNKTE E+ G V+T TLPVLGHYALVLFDS S
Sbjct: 449  TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEVEKAGTVVTGTLPVLGHYALVLFDSGS 508

Query: 421  TPSGECMLSKEKVKGC--QIEITGHVIEVTLLVLDMLDFDVILGMNWLAANHASINCFRK 480
            + S    +S   V     +IEI GHVIEVTL+VLDMLDFDVILGM+WLAANHASI+C RK
Sbjct: 509  SHS---FISSAFVLHARLEIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRK 568

Query: 481  EVTFNPPSMASFKFKGEGSRSLPQVISAMRASKLLSQGTWSILASLVDTREVDISLSSEP 540
            EVTFNPPS+ASFKFKG GS+SLPQVISA+RASKLL+QGTW IL S+VDTREVD+SLSSEP
Sbjct: 569  EVTFNPPSLASFKFKGGGSKSLPQVISAIRASKLLNQGTWGILVSVVDTREVDVSLSSEP 628

Query: 541  VVRDYLDVFPEELPGLPPHREIEFVIKLEPGTVPIFRAPYRMATVELKELKVQLQELLDK 600
            VVRDY DVFP+ELPGLPPHRE+EF I+LEPGTVPI RAPYRMA  ELKELKVQLQELLDK
Sbjct: 629  VVRDYPDVFPDELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDK 688

Query: 601  GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVF 660
            GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVF
Sbjct: 689  GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVF 748

Query: 661  SKIDLRSGYHQLRIKDGDVPKTTFCSRYGHYEFIVMSFGLTNAPAVFMDLINRVFREFLD 720
            S+IDLRSGYHQLRIKD DVPKT F SRYGHYEFIVMSFGLTNAPAVFMDL+NRVFREFLD
Sbjct: 749  SEIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLD 808

Query: 721  TFVIVFIDDILIYSKTEAEHEEHLRMV-----------------------SFLGHVVSKA 780
            TFVIVFIDDILIYSKTEAEHEEHLRMV                       SFLGHVVSKA
Sbjct: 809  TFVIVFIDDILIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKA 868

Query: 781  GVSVDPAKIEAVTSWPRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVW 840
            GVSVDPAKIEAVT W RPSTVSEVRSFLGLAGYYR FVENFSRIATPLTQLTRKGAPFVW
Sbjct: 869  GVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYRQFVENFSRIATPLTQLTRKGAPFVW 928

Query: 841  SKACEDSFQSLKQKLVTTPVLTVPDGSGSFVIYSDASKKDLGSVLMQQGK--------LK 900
            SKACEDSFQ+LKQKLVT PVLTV DGSGSFVIYSDASKK LG VLMQQGK        LK
Sbjct: 929  SKACEDSFQNLKQKLVTAPVLTVRDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLK 988

Query: 901  SHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELIMRQRRWLEL 960
            SHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFT+HKSLKYFFTQKEL MRQRRWLEL
Sbjct: 989  SHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLEL 1048

Query: 961  VKDYDCEILYHPGKANVIADALSRK-----------ALLHQDLERAEIAVSVGAVTMQLA 1020
            VKDYDCEILYHPGKANV+ADALSRK           A LH+DLERAEIAVSVGAVTMQLA
Sbjct: 1049 VKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLA 1108

Query: 1021 QLTVQSTLRQKIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVR 1080
            QLTVQ TLRQ+IIDAQSNDPYLVEKRGLAEAGQA EFS+SSDGGLLFER LCVPSDSAV+
Sbjct: 1109 QLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERHLCVPSDSAVK 1168

Query: 1081 ----------------------------------------------------APRQKPAD 1140
                                                                APRQKPA 
Sbjct: 1169 TELLSEAHSSPFSMHPGSTKMYQDLKRVYWWHNMKREVAEFVSRCLVCQQVKAPRQKPAG 1228

Query: 1141 LLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHFVPGKSTYTASKWVQ 1200
            LLQPLS+PEWKWENVSMDFITGLPRTLRGF VIWVVVDRLTKLAHFVPGKSTYTASKW Q
Sbjct: 1229 LLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKLAHFVPGKSTYTASKWAQ 1288

Query: 1201 LYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQV 1260
            LYMSEIVRLHGVPVSIVS+RDARFT KFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQV
Sbjct: 1289 LYMSEIVRLHGVPVSIVSNRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQV 1348

Query: 1261 LEDMLQACALEFPGSWDSHLHLMEFAYINSFQATIGMAPFEALYGKCCRSPICWGESTNE 1320
            LEDML+ACALEFPGSWDSHLHLMEFAY NS+QATIGMAPFEALYGKCCRSP+CWGE    
Sbjct: 1349 LEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE---- 1408

Query: 1321 AIQKIRSRMHTAQSRQKSYADVRRKDLEFDVGDKVFLKVAPMKGVLRFEKREKLSPHFVG 1330
                                DVRRKDLEF+VGDKVFLKVAPM+GVLRFE+R KLSP FVG
Sbjct: 1409 -------------------VDVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG 1468

[Close]
BLAST of IVF0017494 vs. NCBI nr
Match: KAA0051357.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2234 bits (5790), Expect = 0.0
Identity = 1173/1517 (77.32%), Postives = 1219/1517 (80.36%), Query Frame = 0 

Query: 1    MPPRRSARRDGQGGGGIGAGCVQPEVQPVTQATDPTVPVTHADLAAMEQRFRDLIMQMRK 60
            MPPRR ARR G+GG G GAG VQPE +P +    P                         
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPE-KPASPTPAPA------------------------ 60

Query: 61   QQQPAP-PAPALASAPVPVVPQVVSDQLSAEAKHLKDFRKYNPTTFDGYLKDPTRAQLWL 120
               PAP P PA A A VPV PQ V DQLSAEAKHL+DFRKYNPTTFDG L+DPTRAQ+WL
Sbjct: 61   -PAPAPAPVPAPAPALVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWL 120

Query: 121  SSLETIFRYMKCPEDQKVRCAVFMLTDRGTAWWETTERMLGGDVGQITWQQFKESFYAKF 180
            SSLETIFRYMKCPEDQKV+CAVFMLTDRGTAWWETTERMLGGDV QITWQQFKESFYAKF
Sbjct: 121  SSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKF 180

Query: 181  FSASLRDAKR-------------------------FGSSLPTRHSCRCTA---------- 240
            FSASLRDAKR                         F   +    + R             
Sbjct: 181  FSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQ 240

Query: 241  ----------------LAVDLSLQERANSSKVAGRGSTSGQKRKAEQQPTSVPQRNFRSG 300
                            LAVDLSLQE ANSSK AGRGSTSGQKRKAEQQP  VPQRNFRSG
Sbjct: 241  GLVRAFRPATHADALRLAVDLSLQEMANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRSG 300

Query: 301  GEFRRFQQKPFEAGEATRGKPLCTTCGKHHLGRCLFGTRICFKCRQEGHTADRCPMRLIG 360
            GEFR FQQKPFEAGEA RGKPLCTTCGKHHLGRCLFGTR CFKCRQEGHTADRCP+RL G
Sbjct: 301  GEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTG 360

Query: 361  NAQNQRAGAPHQGKVFATNKTEAEREGMVMTSTLPVLGHYALVLFDS------------- 420
             AQNQ AGAPHQG+VFATN+TEAE+ G V+T TLPVLGHYALVLFDS             
Sbjct: 361  IAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAFVS 420

Query: 421  --------------VSTPSGECMLSKEKVKGCQIEITGHVIEVTLLVLDMLDFDVILGMN 480
                          VSTPSGECMLS+EKVK CQIEI GHVIEVTL+VLDMLDFDVILGM+
Sbjct: 421  HARLEVEPLHHVLSVSTPSGECMLSREKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMD 480

Query: 481  WLAANHASINCFRKEVTFNPPSMASFKFKGEGSRSLPQVISAMRASKLLSQGTWSILASL 540
            WLAANHASI+C RK+VTFNPPSMASFKFKG GS+SLPQVISA+RASKLLSQGTW ILAS+
Sbjct: 481  WLAANHASIDCSRKDVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASV 540

Query: 541  VDTREVDISLSSEPVVRDYLDVFPEELPGLPPHREIEFVIKLEPGTVPIFRAPYRMATVE 600
            VDTRE D+SLSSEPVVRDY DVFPEELPGLPPHRE+EF I+LEPGTVPI RAPYRMA  E
Sbjct: 541  VDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAE 600

Query: 601  LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 660
            LKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR
Sbjct: 601  LKELKVQLQELLDKGFIRPNVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 660

Query: 661  IDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFCSRYGHYEFIVMSFGLTNAPAV 720
            IDDLFDQLQGATVFSKIDLRSGY+QLRIKD DVPKT F SRYGHYEFIVMSFGLTNAPAV
Sbjct: 661  IDDLFDQLQGATVFSKIDLRSGYNQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAV 720

Query: 721  FMDLINRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMV------------------- 780
            FMDL+NRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMV                   
Sbjct: 721  FMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFW 780

Query: 781  ----SFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLAGYYRWFVENFSRIAT 840
                SFLGHVVSKA VSVDPAKIEAVT W RPSTVSEVRSFLGLAGYYR FVENFSRIAT
Sbjct: 781  LKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT 840

Query: 841  PLTQLTRKGAPFVWSKACEDSFQSLKQKLVTTPVLTVPDGSGSFVIYSDASKKDLGSVLM 900
            PLTQLTRKGAPFVWSKACEDSFQ+LKQKLVT PVLTVPDGSGSFVIYSDASKK LG VLM
Sbjct: 841  PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 900

Query: 901  QQGK--------LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFT 960
            QQGK        LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFT+HKSLKYFFT
Sbjct: 901  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 960

Query: 961  QKELIMRQRRWLELVKDYDCEILYHPGKANVIADALSRK-----------ALLHQDLERA 1020
            QKEL MRQRRWLELVKDYDCEILYHPGKANV+ADALSRK           A LH+DLERA
Sbjct: 961  QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 1020

Query: 1021 EIAVSVGAVTMQLAQLTVQSTLRQKIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLL 1080
            EIAVSVGAVTMQLAQLTVQ TLRQ+IIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGL 
Sbjct: 1021 EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLS 1080

Query: 1081 FERRLCVPSDSAVRA--------------------------------------------- 1140
            FE RLCVPSDSAV+                                              
Sbjct: 1081 FEGRLCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCL 1140

Query: 1141 -------PRQKPADLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKLAHF 1200
                   PRQKPA LLQPLS+PEWKWENVSMDFITGLPRTLRGF VIWVVVDRLTK AHF
Sbjct: 1141 VCQQVKEPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHF 1200

Query: 1201 VPGKSTYTASKWVQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQTAMGTRLDFSTAF 1260
            VPGKSTYTASKW QLYMSEIVRLHGVPVSIVSDRDARFT KFWKGLQTAMGTRLDFSTAF
Sbjct: 1201 VPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAF 1260

Query: 1261 HPQTDGQTERLNQVLEDMLQACALEFPGSWDSHLHLMEFAYINSFQATIGMAPFEALYGK 1320
            HPQ DGQTERLNQVLEDML+ACALEFPGSWDSHLHLMEFAY NS+QATIGMAPFEALYGK
Sbjct: 1261 HPQADGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGK 1320

Query: 1321 CCRSPICWGE-------------STNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFDVGD 1331
            CCRSP+CWGE             STNEAIQKIRSRMHTAQSRQKSYADVRRKDLEF++ D
Sbjct: 1321 CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIRD 1380

[Close]
BLAST of IVF0017494 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 1.1e-20
Identity = 47/104 (45.19%), Postives = 69/104 (66.35%), Query Frame = 0 

Query: 682 VSFLG--HVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLAGYYRWFVENFSRIATP 741
           +++LG  H++S  GVS DPAK+EA+  WP P   +E+R FLGL GYYR FV+N+ +I  P
Sbjct: 30  IAYLGHRHIISGEGVSADPAKLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVRP 89

Query: 742 LTQLTRKGAPFVWSKACEDSFQSLKQKLVTTPVLTVPDGSGSFV 784
           LT+L +K +   W++    +F++LK  + T PVL +PD    FV
Sbjct: 90  LTELLKKNS-LKWTEMAALAFKALKGAVTTLPVLALPDLKLPFV 132

The following BLAST results are available for this feature:
BLAST of IVF0017494 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P0CT412.6e-11230.15Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
P0CT342.6e-11230.15Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT352.6e-11230.15Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT362.6e-11230.15Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT372.6e-11230.15Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
BLAST of IVF0017494 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U3300.0e+0080.28Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43... [more]
A0A5A7UDB10.0e+0078.64Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold10... [more]
A0A5A7TGS70.0e+0080.78Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34... [more]
A0A5A7UAA80.0e+0077.32Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55... [more]
A0A5A7TGX40.0e+0078.24Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold52... [more]
BLAST of IVF0017494 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0048687.10.080.37pol protein [Cucumis melo var. makuwa][more]
KAA0053234.10.078.64DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
KAA0040871.10.080.86DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
KAA0040695.10.078.24pol protein [Cucumis melo var. makuwa][more]
KAA0051357.10.077.32pol protein [Cucumis melo var. makuwa][more]
BLAST of IVF0017494 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00860.11.1e-2045.19DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 515..535
NoneNo IPR availablePFAMPF08284RVP_2coord: 356..421
e-value: 3.0E-17
score: 62.7
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 498..637
e-value: 7.1E-77
score: 259.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..249
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 264..1080
NoneNo IPR availablePANTHERPTHR24559:SF383DNA/RNA POLYMERASES SUPERFAMILY PROTEINcoord: 264..1080
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..21
score: 6.0
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 783..890
e-value: 3.14526E-47
score: 162.662
NoneNo IPR availableCDDcd01647RT_LTRcoord: 536..689
e-value: 1.34388E-76
score: 249.049
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 355..404
e-value: 4.58549E-10
score: 55.8056
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 983..1183
e-value: 2.9E-41
score: 143.0
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 780..868
e-value: 2.4E-22
score: 79.2
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 353..428
e-value: 4.2E-11
score: 44.6
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 703..791
e-value: 1.8E-30
score: 106.8
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 577..702
e-value: 7.1E-77
score: 259.5
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 552..706
e-value: 9.1E-22
score: 77.7
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 533..724
score: 12.011964
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 985..1148
score: 17.587097
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 289..303
score: 9.438442
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 986..1145
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 476..874

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0017494.1IVF0017494.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006508 proteolysis
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003964 RNA-directed DNA polymerase activity
molecular_function GO:0008270 zinc ion binding