IVF0017492 (gene) Melon (IVF77) v1

Overview
NameIVF0017492
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr04: 16211925 .. 16212162 (-)
RNA-Seq ExpressionIVF0017492
SyntenyIVF0017492
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTACGCAGCTCTACGTCGGCATAATCCTGAAATGCATCGGTAGAAGCTACGCCGATGTTAAAACTGACTTTGGTAAGGACGTTGTGAAAAATGGGTCGGTGAAGCCTCTCCCGACATCGACAAAGAGCATTGGCAAAGATTACTACCGATGCGCTCTTTGCCGACATGGTCAATAAGTCAAAAGTGTATAACTACGAACATGTGTTAATAGCGTTACAAATACCTCACTGCTGA

mRNA sequence

ATGCCTACGCAGCTCTACGTCGGCATAATCCTGAAATGCATCGGTAGAAGCTACGCCGATGTTAAAACTGACTTTGGTAAGGACGTTGTGAAAAATGGAGCATTGGCAAAGATTACTACCGATGCGCTCTTTGCCGACATGGTCAATAAGTCAAAAGTGTATAACTACGAACATGTGTTAATAGCGTTACAAATACCTCACTGCTGA

Coding sequence (CDS)

ATGCCTACGCAGCTCTACGTCGGCATAATCCTGAAATGCATCGGTAGAAGCTACGCCGATGTTAAAACTGACTTTGGTAAGGACGTTGTGAAAAATGGAGCATTGGCAAAGATTACTACCGATGCGCTCTTTGCCGACATGGTCAATAAGTCAAAAGTGTATAACTACGAACATGTGTTAATAGCGTTACAAATACCTCACTGCTGA

Protein sequence

MPTQLYVGIILKCIGRSYADVKTDFGKDVVKNGALAKITTDALFADMVNKSKVYNYEHVLIALQIPHC
Homology
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BLAST of IVF0017492 vs. NCBI nr
Match: TYJ97466.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 48.9 bits (115), Expect = 1.55e-04
Identity = 22/40 (55.00%), Postives = 28/40 (70.00%), Query Frame = 0 

Query: 1   MPTQLYVGIILKCIGRSYADVKTDFGKDVVKNGALAKITT 40
           MPTQL +GII K + RSY DV+TD  KDVV+N +   + T
Sbjct: 239 MPTQLCIGIISKYVDRSYIDVETDINKDVVRNASTLPLPT 278

The following BLAST results are available for this feature:
BLAST of IVF0017492 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0017492 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0017492 vs. NCBI nr
Match NameE-valueIdentityDescription
TYJ97466.11.55e-0455.00putative mitochondrial protein [Cucumis melo var. makuwa][more]
BLAST of IVF0017492 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0017492.1IVF0017492.1mRNA