IVF0017451 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATATTGCGACAACGTTGACGATGTGGACGAGAGGGACTCCACGTACGCGACGACCACTGCTTCAGAAGACATTGACTACATTGAGACAACAAACGAGTGGTCTCAGTGGCATGACGAACTAGCTAAATCGATGTTCACTGATTGGCAGTTGCGTAACGCTTAG ATGACATATTGCGACAACGTTGACGATGTGGACGAGAGGGACTCCACGTACGCGACGACCACTGCTTCAGAAGACATTGACTACATTGAGACAACAAACGAGTGGTCTCAGTGGCATGACGAACTAGCTAAATCGATGTTCACTGATTGGCAGTTGCGTAACGCTTAG ATGACATATTGCGACAACGTTGACGATGTGGACGAGAGGGACTCCACGTACGCGACGACCACTGCTTCAGAAGACATTGACTACATTGAGACAACAAACGAGTGGTCTCAGTGGCATGACGAACTAGCTAAATCGATGTTCACTGATTGGCAGTTGCGTAACGCTTAG MTYCDNVDDVDERDSTYATTTASEDIDYIETTNEWSQWHDELAKSMFTDWQLRNA Homology
BLAST of IVF0017451 vs. ExPASy TrEMBL
Match: A0A5D3E5R9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002260 PE=3 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.8e-23 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0017451 vs. ExPASy TrEMBL
Match: A0A5A7VDR4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00940 PE=3 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 9.2e-20 Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of IVF0017451 vs. ExPASy TrEMBL
Match: A0A5D3BAK8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold19391G00020 PE=3 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 9.2e-20 Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of IVF0017451 vs. ExPASy TrEMBL
Match: A0A5A7SMB5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G001310 PE=3 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 2.1e-19 Identity = 48/55 (87.27%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of IVF0017451 vs. ExPASy TrEMBL
Match: A0A5D3BDZ0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00280 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 3.5e-19 Identity = 48/55 (87.27%), Postives = 51/55 (92.73%), Query Frame = 0
BLAST of IVF0017451 vs. NCBI nr
Match: TYK30996.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 117 bits (292), Expect = 1.37e-31 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0017451 vs. NCBI nr
Match: KAA0054051.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ96871.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 102 bits (255), Expect = 2.45e-27 Identity = 48/55 (87.27%), Postives = 51/55 (92.73%), Query Frame = 0
BLAST of IVF0017451 vs. NCBI nr
Match: TYK22655.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 99.8 bits (247), Expect = 4.08e-26 Identity = 47/55 (85.45%), Postives = 49/55 (89.09%), Query Frame = 0
BLAST of IVF0017451 vs. NCBI nr
Match: KAA0066980.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ96789.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 101 bits (251), Expect = 9.68e-26 Identity = 47/55 (85.45%), Postives = 51/55 (92.73%), Query Frame = 0
BLAST of IVF0017451 vs. NCBI nr
Match: TYJ95515.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 104 bits (260), Expect = 1.09e-25 Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|