IVF0017385 (gene) Melon (IVF77) v1

Overview


Name	IVF0017385
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	photosystem II 22 kDa protein, chloroplastic
Location	chr03: 8195481 .. 8197695 (+)
RNA-Seq Expression	IVF0017385
Synteny	IVF0017385

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAAACTCTTCCACCAAATCCACATGCACAATCTCCTTCTCTTCCCTTCCACCATACACTCAAAATCCCACTGATCTTCTTCTTCATAAAAACCCATATAATCATAAATTAATTTCCTCAAGTTTTTCTTTTCCAATTAAACAAACAACTCTGCTAAAGAGGCCTTTCTTCCACCATTTCCATGGCGGCTCAAACCATGCTCCTCACTTCTGGTGTGTGCGTCGGCCATGGTGTGTGTCTCAAAAGAGAATTGAGCCTTAGACCTAACAACAACCAATTTACTCGTCTCTTTTTCAATCCTCTGCCGAACCATTCTGTTTCTTTACCGGCGCGTGGTTTCACCCCTCTTGCTGTGTTCAAATCCAGAACTAAAGCCCCGCCCAAGAAGGTAATTGATTAATTGTTTATTTTTGTTATTATCAATATTATTATTAAATAAAATGGAATTAGAATGAAAGTATTTTGATATTGTTTTAGGTTGAGAAGCCGAAGCAGAAGGTTGAAGATGGAATTTTTGGGACTTCTGGTGGCATTGGTTTTACCAAGCAGAATGAACTCTTCGTCGGCCGTGTTGCTATGATCGGCTTTGCTGTAAGATCTATGGATCTATACGTTTATTATTACATATAATTTTATTTATTTTATTTTTCGTAAAATTGATAGCTATTTTAGCAGATTTGTTGGAGAATCTATGAAACTATATTTCAAAATCTTTACTACTAAAATCATACAATATTTTTCTGACATTTTTACCATTGTTTTCAAGTTAAGTATTCTAAATCATCTAGTTTAAGTATGAGTGTTTATTTAATATATGTTTTTAATATTTTTAATTTTTACTTACATTTCACCATATTCTTTTTTTTTTTCAAATACTTGGTCTATTCATGATTGGTATTTAATCGAAAAATTCAATGTTATTTTTCTTTTTTCAAAAATTCATTAGTACAATTGAACCAAATAAAATTTGAAATTTAGTAACTAAACTTGTAGTTTAATTAAATTAATCCAAACCCAAGATGGAATAAAATATATGAAATTTACTCACCAAATTTGTAATTTAACAAAACTATTCTAAAAAATTAGAGTGATGGTTTAGTTTCAGAGTGAACCAAGAATCAAACAAAATCGATTGGTTTTAAAATTGAATAAAGAAAAAACCCATGGGTTCATTTTTACTTAGTTATTGTTTCGTGACATTTTTTTTGTAACTGCACTTTGTAATAAAGACAATCGTATAGGAAAATAAGCATAACTGGAGTGGTAAATGTTACATTATCTCTCACACATCGCATCAATCCAAACTAAAAAAATTAGAATAAACTTAATCGGTAGATTTTGATATTTGTGTAAAATTTGCAGGCATCATTGCTAGGAGAGGCGATCACCGGAAAGGGAATTCTAGCTCAACTCAACTTAGAAACTGGAATTCCCATTTACGAGGCCGAGCCTCTTCTTCTCTTCTTCATCTTATTCACTCTTCTCGGAGCCATCGGAGCCCTAGGAGACCGTGGAAAATTCATCGACGATCCTGAACCCGCCACTGGATTGGAACGCGCCGTCATTCCTCCCGGAAAGAGCTTCAGATCGGCCTTAGGTCTCAAAGAAGGAGGTAATTTTAATTACATCACAAACAATCAAATCAACTTACTCCATTCTTCTCTTCTCTTCAATTAAATCTAATTTATGACGCCTTTGTTCTGTTGAAGGTCCGTTGTTCGGATTCACCAAGGCCAATGAGCTGTTCGTCGGAAGATTGGCGCAGCTAGGGTTTGCGTTCTCGTTGATCGGAGAAATTATTACAGGAAAGGGAGCTTTGGCGCAATTGAACATCGAGACGGGAGTGCCGATCAATGAGATTGAGCCTCTGGTTTTGTTGAATGTTGTGTTCTTCTTCATTGCGGCGGTGAATCCTGGAACTGGTAAATTCGTGACGGATGAAGAAGATGATGAATGAAGAGATGGATTGTGCTTTAATTTTTCTCTGTACATGATGAACTTAGCAAGTCCGTATGTTCTTTCTCAGGGTTGTTGTGCTATTAGAACATTCTTATCCTCTGCTTGAGCACTCGAATCAACGAAATCGAAGTAACAAACTTTGGGTAGTTAAAGTTTAGGCAAACATCAGTCTTTTTGCTTCTTTCATTTTACTTTTCTCATTTTTCCCCCTTTGGATTGGGTGGAGAAAATTAATTAATAAATACATTAGCCAAG

mRNA sequence

CTCAAACTCTTCCACCAAATCCACATGCACAATCTCCTTCTCTTCCCTTCCACCATACACTCAAAATCCCACTGATCTTCTTCTTCATAAAAACCCATATAATCATAAATTAATTTCCTCAAGTTTTTCTTTTCCAATTAAACAAACAACTCTGCTAAAGAGGCCTTTCTTCCACCATTTCCATGGCGGCTCAAACCATGCTCCTCACTTCTGGTGTGTGCGTCGGCCATGGTGTGTGTCTCAAAAGAGAATTGAGCCTTAGACCTAACAACAACCAATTTACTCGTCTCTTTTTCAATCCTCTGCCGAACCATTCTGTTTCTTTACCGGCGCGTGGTTTCACCCCTCTTGCTGTGTTCAAATCCAGAACTAAAGCCCCGCCCAAGAAGGTTGAGAAGCCGAAGCAGAAGGTTGAAGATGGAATTTTTGGGACTTCTGGTGGCATTGGTTTTACCAAGCAGAATGAACTCTTCGTCGGCCGTGTTGCTATGATCGGCTTTGCTGCATCATTGCTAGGAGAGGCGATCACCGGAAAGGGAATTCTAGCTCAACTCAACTTAGAAACTGGAATTCCCATTTACGAGGCCGAGCCTCTTCTTCTCTTCTTCATCTTATTCACTCTTCTCGGAGCCATCGGAGCCCTAGGAGACCGTGGAAAATTCATCGACGATCCTGAACCCGCCACTGGATTGGAACGCGCCGTCATTCCTCCCGGAAAGAGCTTCAGATCGGCCTTAGGTCTCAAAGAAGGAGGTCCGTTGTTCGGATTCACCAAGGCCAATGAGCTGTTCGTCGGAAGATTGGCGCAGCTAGGGTTTGCGTTCTCGTTGATCGGAGAAATTATTACAGGAAAGGGAGCTTTGGCGCAATTGAACATCGAGACGGGAGTGCCGATCAATGAGATTGAGCCTCTGGTTTTGTTGAATGTTGTGTTCTTCTTCATTGCGGCGGTGAATCCTGGAACTGGTAAATTCGTGACGGATGAAGAAGATGATGAATGAAGAGATGGATTGTGCTTTAATTTTTCTCTGTACATGATGAACTTAGCAAGTCCGTATGTTCTTTCTCAGGGTTGTTGTGCTATTAGAACATTCTTATCCTCTGCTTGAGCACTCGAATCAACGAAATCGAAGTAACAAACTTTGGGTAGTTAAAGTTTAGGCAAACATCAGTCTTTTTGCTTCTTTCATTTTACTTTTCTCATTTTTCCCCCTTTGGATTGGGTGGAGAAAATTAATTAATAAATACATTAGCCAAG

Coding sequence (CDS)

ATGGCGGCTCAAACCATGCTCCTCACTTCTGGTGTGTGCGTCGGCCATGGTGTGTGTCTCAAAAGAGAATTGAGCCTTAGACCTAACAACAACCAATTTACTCGTCTCTTTTTCAATCCTCTGCCGAACCATTCTGTTTCTTTACCGGCGCGTGGTTTCACCCCTCTTGCTGTGTTCAAATCCAGAACTAAAGCCCCGCCCAAGAAGGTTGAGAAGCCGAAGCAGAAGGTTGAAGATGGAATTTTTGGGACTTCTGGTGGCATTGGTTTTACCAAGCAGAATGAACTCTTCGTCGGCCGTGTTGCTATGATCGGCTTTGCTGCATCATTGCTAGGAGAGGCGATCACCGGAAAGGGAATTCTAGCTCAACTCAACTTAGAAACTGGAATTCCCATTTACGAGGCCGAGCCTCTTCTTCTCTTCTTCATCTTATTCACTCTTCTCGGAGCCATCGGAGCCCTAGGAGACCGTGGAAAATTCATCGACGATCCTGAACCCGCCACTGGATTGGAACGCGCCGTCATTCCTCCCGGAAAGAGCTTCAGATCGGCCTTAGGTCTCAAAGAAGGAGGTCCGTTGTTCGGATTCACCAAGGCCAATGAGCTGTTCGTCGGAAGATTGGCGCAGCTAGGGTTTGCGTTCTCGTTGATCGGAGAAATTATTACAGGAAAGGGAGCTTTGGCGCAATTGAACATCGAGACGGGAGTGCCGATCAATGAGATTGAGCCTCTGGTTTTGTTGAATGTTGTGTTCTTCTTCATTGCGGCGGTGAATCCTGGAACTGGTAAATTCGTGACGGATGAAGAAGATGATGAATGA

Protein sequence

MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

Homology

[Close]

BLAST of IVF0017385 vs. ExPASy Swiss-Prot
Match: Q9XF91 (Photosystem II 22 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBS PE=2 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.7e-108
Identity = 211/271 (77.86%), Postives = 230/271 (84.87%), Query Frame = 0


Query: 3   AQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPAR--GFTPLAVFK 62
           AQTMLLTSGV  GH +  K  L+      +   LF +   N  V+LP+R   F PLA+FK
Sbjct: 2   AQTMLLTSGVTAGHFLRNKSPLA----QPKVHHLFLS--GNSPVALPSRRQSFVPLALFK 61

Query: 63  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGI 122
            +TKA PKKVEKPK KVEDGIFGTSGGIGFTK NELFVGRVAMIGFAASLLGEA+TGKGI
Sbjct: 62  PKTKAAPKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGI 121

Query: 123 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS 182
           LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGLE+AVIPPGK+
Sbjct: 122 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDD--PPTGLEKAVIPPGKN 181

Query: 183 FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 242
            RSALGLKE GPLFGFTKANELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +
Sbjct: 182 VRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQD 241

Query: 243 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 272
           IEPLVLLNV FFF AA+NPG GKF+TD+ ++
Sbjct: 242 IEPLVLLNVAFFFFAAINPGNGKFITDDGEE 264

[Close]

BLAST of IVF0017385 vs. ExPASy Swiss-Prot
Match: Q9FPP4 (Photosystem II 22 kDa protein, chloroplastic OS=Solanum sogarandinum OX=52705 GN=PSBS PE=2 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 2.5e-107
Identity = 210/277 (75.81%), Postives = 229/277 (82.67%), Query Frame = 0


Query: 3   AQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLP----NHSVSLPARGF--TPL 62
           AQTMLLT+   V   +  K  L  R      + LF   LP    + + +  +  F  T +
Sbjct: 2   AQTMLLTANAKV--DLRSKESLVERLKPKPLSSLFLPSLPLRFSSSTTNFSSSKFTSTTV 61

Query: 63  AVFKSRTKAPPKKVEKP--KQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEA 122
           A+FKS+ KAPPKKV  P  KQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEA
Sbjct: 62  ALFKSKAKAPPKKVAPPKEKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEA 121

Query: 123 ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAV 182
           ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRG+FIDDP PATGLE+AV
Sbjct: 122 ITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGRFIDDPAPATGLEKAV 181

Query: 183 IPPGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIET 242
           IPPGKSF+SALGL EGGPLFGFTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ET
Sbjct: 182 IPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFET 241

Query: 243 GVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 272
           GVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEE+D
Sbjct: 242 GVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276

[Close]

BLAST of IVF0017385 vs. ExPASy Swiss-Prot
Match: P54773 (Photosystem II 22 kDa protein, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PSBS PE=3 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 3.3e-107
Identity = 210/277 (75.81%), Postives = 228/277 (82.31%), Query Frame = 0


Query: 3   AQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLP----NHSVSLPARGF--TPL 62
           AQTMLLT+   V   +  K  L  R      + LF   LP    + S +  +  F  T +
Sbjct: 2   AQTMLLTANAKV--DLRSKESLVERLKPKPLSSLFLPSLPLRFSSSSTNASSSKFTSTTV 61

Query: 63  AVFKSRTKAPPKKVEKP--KQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEA 122
           A+FKS+ KAPPKKV  P  KQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEA
Sbjct: 62  ALFKSKAKAPPKKVAPPKEKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEA 121

Query: 123 ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAV 182
           ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRGKF+DDP P TGLE+AV
Sbjct: 122 ITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFVDDPTPPTGLEKAV 181

Query: 183 IPPGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIET 242
           IPPGKSF+SALGL EGGPLFGFTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ET
Sbjct: 182 IPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFET 241

Query: 243 GVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 272
           GVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEE+D
Sbjct: 242 GVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276

[Close]

BLAST of IVF0017385 vs. ExPASy Swiss-Prot
Match: Q02060 (Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSBS PE=1 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 3.3e-107
Identity = 209/278 (75.18%), Postives = 234/278 (84.17%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELSLR------PNNNQFTRLFFNPLPNHSVSLPARGFT 60
           MA   +L+  GV   + + LKR   L+         +  + LFF+PLP+ S S  +  F 
Sbjct: 1   MAQAMLLMMPGVSTTNTIDLKRNALLKLQIQKIKPKSSTSNLFFSPLPSSS-SSSSTVFK 60

Query: 61  PLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEA 120
            LA+FKS+ KA PKKVEKPK KVEDG+FGTSGGIGFTK+NELFVGRVAMIGFAASLLGE 
Sbjct: 61  TLALFKSKAKA-PKKVEKPKLKVEDGLFGTSGGIGFTKENELFVGRVAMIGFAASLLGEG 120

Query: 121 ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAV 180
           ITGKGIL+QLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+F+D  EP TGLE+AV
Sbjct: 121 ITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVD--EPTTGLEKAV 180

Query: 181 IPPGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIET 240
           IPPGK  RSALGLK  GPLFGFTK+NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIET
Sbjct: 181 IPPGKDVRSALGLKTKGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIET 240

Query: 241 GVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 273
           GVPINEIEPLVLLNVVFFFIAA+NPGTGKF+TD+E+++
Sbjct: 241 GVPINEIEPLVLLNVVFFFIAAINPGTGKFITDDEEED 274

[Close]

BLAST of IVF0017385 vs. ExPASy Swiss-Prot
Match: Q9SMB4 (Photosystem II 22 kDa protein, chloroplastic OS=Nicotiana tabacum OX=4097 GN=PSBS PE=2 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 3.4e-104
Identity = 206/275 (74.91%), Postives = 223/275 (81.09%), Query Frame = 0


Query: 3   AQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARG-----FTPLA 62
           AQTMLLT+   V   +  K  L  R      +  F   LP    S  A        T +A
Sbjct: 2   AQTMLLTANAKV--DLRSKESLVERLKPKPLSSFFLPSLPLKYPSASASASSHFTSTTVA 61

Query: 63  VFKSRTKAPPKK-VEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAIT 122
           +FKS+ KAP KK V KPK+KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAIT
Sbjct: 62  LFKSKAKAPAKKVVPKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAIT 121

Query: 123 GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP 182
           GKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGAL DRGKFIDDP P TGL++AVIP
Sbjct: 122 GKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALEDRGKFIDDPAPPTGLDKAVIP 181

Query: 183 PGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGV 242
           PGK F+SALGL EGGPLF FTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGV
Sbjct: 182 PGKGFKSALGLSEGGPLFEFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGV 241

Query: 243 PINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 272
           PINEIEPL+L N+VFFF+AA+NPGTGKFVTDEE++
Sbjct: 242 PINEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 274

[Close]

BLAST of IVF0017385 vs. ExPASy TrEMBL
Match: A0A5A7UZ08 (Photosystem II 22 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00970 PE=4 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.4e-148
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFK 60
           MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFK
Sbjct: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFK 60

Query: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGI 120
           SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGI
Sbjct: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGI 120

Query: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS 180
           LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS
Sbjct: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS 180

Query: 181 FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240
           FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE
Sbjct: 181 FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240

Query: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 273
           IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Sbjct: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 272

[Close]

BLAST of IVF0017385 vs. ExPASy TrEMBL
Match: A0A1S3CS23 (photosystem II 22 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504056 PE=4 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.4e-148
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFK 60
           MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFK
Sbjct: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFK 60

Query: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGI 120
           SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGI
Sbjct: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGI 120

Query: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS 180
           LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS
Sbjct: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS 180

Query: 181 FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240
           FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE
Sbjct: 181 FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240

Query: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 273
           IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Sbjct: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 272

[Close]

BLAST of IVF0017385 vs. ExPASy TrEMBL
Match: A0A0A0K7N4 (Photosystem II protein OS=Cucumis sativus OX=3659 GN=Csa_7G267900 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.2e-144
Identity = 266/272 (97.79%), Postives = 268/272 (98.53%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFK 60
           MAAQTMLLTSGVCVGHGVCLKRELSLRPN  QFTRLFFNPLP+HSVSLP RGFT LAVFK
Sbjct: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFK 60

Query: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGI 120
           SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAAS+LGEAITGKGI
Sbjct: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASILGEAITGKGI 120

Query: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS 180
           LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS
Sbjct: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS 180

Query: 181 FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240
           FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE
Sbjct: 181 FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240

Query: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 273
           IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Sbjct: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 272

[Close]

BLAST of IVF0017385 vs. ExPASy TrEMBL
Match: A0A6J1GLX6 (photosystem II 22 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111455493 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.1e-129
Identity = 244/276 (88.41%), Postives = 256/276 (92.75%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNNNQFTRLFFNPLPNHSVSLPARGFTP 60
           MAAQTM+L+SGVC  HGV LKRE++     LRP N QF+RLFFNPLP+ SVSLPARGF  
Sbjct: 1   MAAQTMVLSSGVCASHGVALKREIASLTQRLRP-NAQFSRLFFNPLPSSSVSLPARGFRT 60

Query: 61  LAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAI 120
           LA+FKS+ K P KKV KPK+KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGE I
Sbjct: 61  LAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI 120

Query: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180
           TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI
Sbjct: 121 TGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180

Query: 181 PPGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240
           PPGK  RSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG
Sbjct: 181 PPGKGLRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240

Query: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 272
           VPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Sbjct: 241 VPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED 275

[Close]

BLAST of IVF0017385 vs. ExPASy TrEMBL
Match: A0A6J1JV31 (photosystem II 22 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111487764 PE=4 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 9.2e-129
Identity = 243/276 (88.04%), Postives = 255/276 (92.39%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNNNQFTRLFFNPLPNHSVSLPARGFTP 60
           MAAQTM+L+SGVC  HGV LKRE++     LRP N Q +RLFFNPLP+ SVSLPARGF  
Sbjct: 1   MAAQTMVLSSGVCASHGVALKREIASLTRRLRP-NAQSSRLFFNPLPSSSVSLPARGFRT 60

Query: 61  LAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAI 120
           LA+FKS+ K P KKV KPK+KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGE I
Sbjct: 61  LAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI 120

Query: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180
           TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI
Sbjct: 121 TGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180

Query: 181 PPGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240
           PPGK  RSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG
Sbjct: 181 PPGKGLRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240

Query: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 272
           VPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Sbjct: 241 VPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED 275

[Close]

BLAST of IVF0017385 vs. NCBI nr
Match: XP_008466710.1 (PREDICTED: photosystem II 22 kDa protein, chloroplastic [Cucumis melo] >KAA0059887.1 photosystem II 22 kDa protein [Cucumis melo var. makuwa] >TYK24837.1 photosystem II 22 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 536 bits (1381), Expect = 5.00e-192
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFK 60
           MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFK
Sbjct: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFK 60

Query: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGI 120
           SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGI
Sbjct: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGI 120

Query: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS 180
           LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS
Sbjct: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS 180

Query: 181 FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240
           FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE
Sbjct: 181 FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240

Query: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 272
           IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Sbjct: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 272

[Close]

BLAST of IVF0017385 vs. NCBI nr
Match: XP_004150442.1 (photosystem II 22 kDa protein, chloroplastic [Cucumis sativus] >KAE8647273.1 hypothetical protein Csa_018297 [Cucumis sativus])

HSP 1 Score: 523 bits (1347), Expect = 7.63e-187
Identity = 266/272 (97.79%), Postives = 268/272 (98.53%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFK 60
           MAAQTMLLTSGVCVGHGVCLKRELSLRPN  QFTRLFFNPLP+HSVSLP RGFT LAVFK
Sbjct: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNYTQFTRLFFNPLPSHSVSLPPRGFTTLAVFK 60

Query: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGI 120
           SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAAS+LGEAITGKGI
Sbjct: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASILGEAITGKGI 120

Query: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS 180
           LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS
Sbjct: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS 180

Query: 181 FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240
           FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE
Sbjct: 181 FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240

Query: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 272
           IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Sbjct: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 272

[Close]

BLAST of IVF0017385 vs. NCBI nr
Match: XP_038885143.1 (photosystem II 22 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 508 bits (1309), Expect = 4.56e-181
Identity = 261/272 (95.96%), Postives = 266/272 (97.79%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFK 60
           MAAQTMLLTSGVCVGHGV +KREL LRPN  QF+RLFFNPLP+HSVSLPARGFT LAVFK
Sbjct: 1   MAAQTMLLTSGVCVGHGVGVKRELRLRPNA-QFSRLFFNPLPSHSVSLPARGFTTLAVFK 60

Query: 61  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGI 120
           SRTKAPPKKV KPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGI
Sbjct: 61  SRTKAPPKKVSKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGI 120

Query: 121 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS 180
           LAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK+
Sbjct: 121 LAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKN 180

Query: 181 FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240
           FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE
Sbjct: 181 FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 240

Query: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 272
           IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Sbjct: 241 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 271

[Close]

BLAST of IVF0017385 vs. NCBI nr
Match: XP_022952982.1 (photosystem II 22 kDa protein, chloroplastic-like [Cucurbita moschata] >XP_023545993.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG7032798.1 Photosystem II 22 kDa protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 473 bits (1218), Expect = 3.89e-167
Identity = 244/276 (88.41%), Postives = 256/276 (92.75%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNNNQFTRLFFNPLPNHSVSLPARGFTP 60
           MAAQTM+L+SGVC  HGV LKRE++     LRPN  QF+RLFFNPLP+ SVSLPARGF  
Sbjct: 1   MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNA-QFSRLFFNPLPSSSVSLPARGFRT 60

Query: 61  LAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAI 120
           LA+FKS+ K P KKV KPK+KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGE I
Sbjct: 61  LAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI 120

Query: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180
           TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI
Sbjct: 121 TGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180

Query: 181 PPGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240
           PPGK  RSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG
Sbjct: 181 PPGKGLRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240

Query: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 271
           VPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Sbjct: 241 VPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED 275

[Close]

BLAST of IVF0017385 vs. NCBI nr
Match: XP_022991058.1 (photosystem II 22 kDa protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 470 bits (1210), Expect = 6.44e-166
Identity = 243/276 (88.04%), Postives = 255/276 (92.39%), Query Frame = 0


Query: 1   MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNNNQFTRLFFNPLPNHSVSLPARGFTP 60
           MAAQTM+L+SGVC  HGV LKRE++     LRPN  Q +RLFFNPLP+ SVSLPARGF  
Sbjct: 1   MAAQTMVLSSGVCASHGVALKREIASLTRRLRPNA-QSSRLFFNPLPSSSVSLPARGFRT 60

Query: 61  LAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAI 120
           LA+FKS+ K P KKV KPK+KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGE I
Sbjct: 61  LAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI 120

Query: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180
           TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI
Sbjct: 121 TGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180

Query: 181 PPGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240
           PPGK  RSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG
Sbjct: 181 PPGKGLRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240

Query: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 271
           VPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Sbjct: 241 VPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED 275

[Close]

BLAST of IVF0017385 vs. TAIR 10
Match: AT1G44575.1 (Chlorophyll A-B binding family protein )

HSP 1 Score: 393.7 bits (1010), Expect = 1.2e-109
Identity = 211/271 (77.86%), Postives = 230/271 (84.87%), Query Frame = 0


Query: 3   AQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPAR--GFTPLAVFK 62
           AQTMLLTSGV  GH +  K  L+      +   LF +   N  V+LP+R   F PLA+FK
Sbjct: 2   AQTMLLTSGVTAGHFLRNKSPLA----QPKVHHLFLS--GNSPVALPSRRQSFVPLALFK 61

Query: 63  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGI 122
            +TKA PKKVEKPK KVEDGIFGTSGGIGFTK NELFVGRVAMIGFAASLLGEA+TGKGI
Sbjct: 62  PKTKAAPKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGI 121

Query: 123 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS 182
           LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGLE+AVIPPGK+
Sbjct: 122 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDD--PPTGLEKAVIPPGKN 181

Query: 183 FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE 242
            RSALGLKE GPLFGFTKANELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +
Sbjct: 182 VRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQD 241

Query: 243 IEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 272
           IEPLVLLNV FFF AA+NPG GKF+TD+ ++
Sbjct: 242 IEPLVLLNVAFFFFAAINPGNGKFITDDGEE 264

[Close]

BLAST of IVF0017385 vs. TAIR 10
Match: AT1G44575.2 (Chlorophyll A-B binding family protein )

HSP 1 Score: 258.8 bits (660), Expect = 4.8e-69
Identity = 144/191 (75.39%), Postives = 156/191 (81.68%), Query Frame = 0


Query: 3   AQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPAR--GFTPLAVFK 62
           AQTMLLTSGV  GH +  K  L+      +   LF +   N  V+LP+R   F PLA+FK
Sbjct: 2   AQTMLLTSGVTAGHFLRNKSPLA----QPKVHHLFLS--GNSPVALPSRRQSFVPLALFK 61

Query: 63  SRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGI 122
            +TKA PKKVEKPK KVEDGIFGTSGGIGFTK NELFVGRVAMIGFAASLLGEA+TGKGI
Sbjct: 62  PKTKAAPKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGI 121

Query: 123 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKS 182
           LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGLE+AVIPPGK+
Sbjct: 122 LAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDD--PPTGLEKAVIPPGKN 181

Query: 183 FRSALGLKEGG 192
            RSALGLKE G
Sbjct: 182 VRSALGLKEQG 184

The following BLAST results are available for this feature:

BLAST of IVF0017385 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XF91	1.7e-108	77.86	Photosystem II 22 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9FPP4	2.5e-107	75.81	Photosystem II 22 kDa protein, chloroplastic OS=Solanum sogarandinum OX=52705 GN...	[more]
P54773	3.3e-107	75.81	Photosystem II 22 kDa protein, chloroplastic OS=Solanum lycopersicum OX=4081 GN=...	[more]
Q02060	3.3e-107	75.18	Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSB...	[more]
Q9SMB4	3.4e-104	74.91	Photosystem II 22 kDa protein, chloroplastic OS=Nicotiana tabacum OX=4097 GN=PSB...	[more]

BLAST of IVF0017385 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UZ08	1.4e-148	100.00	Photosystem II 22 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CS23	1.4e-148	100.00	photosystem II 22 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A0A0K7N4	1.2e-144	97.79	Photosystem II protein OS=Cucumis sativus OX=3659 GN=Csa_7G267900 PE=4 SV=1	[more]
A0A6J1GLX6	1.1e-129	88.41	photosystem II 22 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1JV31	9.2e-129	88.04	photosystem II 22 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of IVF0017385 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466710.1	5.00e-192	100.00	PREDICTED: photosystem II 22 kDa protein, chloroplastic [Cucumis melo] >KAA00598...	[more]
XP_004150442.1	7.63e-187	97.79	photosystem II 22 kDa protein, chloroplastic [Cucumis sativus] >KAE8647273.1 hyp...	[more]
XP_038885143.1	4.56e-181	95.96	photosystem II 22 kDa protein, chloroplastic [Benincasa hispida]	[more]
XP_022952982.1	3.89e-167	88.41	photosystem II 22 kDa protein, chloroplastic-like [Cucurbita moschata] >XP_02354...	[more]
XP_022991058.1	6.44e-166	88.04	photosystem II 22 kDa protein, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of IVF0017385 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G44575.1	1.2e-109	77.86	Chlorophyll A-B binding family protein	[more]
AT1G44575.2	4.8e-69	75.39	Chlorophyll A-B binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 51..216 e-value: 3.1E-9 score: 37.6
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 32..133 e-value: 3.8E-6 score: 29.1
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 134..244 e-value: 2.5E-5 score: 26.1
None	No IPR available	PANTHER	PTHR14154:SF74	PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC	coord: 3..184
None	No IPR available	PANTHER	PTHR14154:SF74	PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC	coord: 194..257
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 3..184
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 194..257
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 76..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0017385.2	IVF0017385.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010196	nonphotochemical quenching
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019904	protein domain specific binding