IVF0017334 (gene) Melon (IVF77) v1

Overview


Name	IVF0017334
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	protein DCL, chloroplastic
Location	chr07: 2239862 .. 2242408 (-)
RNA-Seq Expression	IVF0017334
Synteny	IVF0017334

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAATGCGGATCGAAGAGAAATTCTATAGAATCTCCATTCCATGAGATTGATGATAATGTGAGCGACCGTTAACAGTTCTTCTTCCTCCGTTTTCTCAAAGAATTGGGAGAAAAGCCATGCTCCGAAATCGCACACTACCATTTCATTCTCGATAGTTGCAATTTCAAGCTCCTTGTCTCAATTGATCAAGGGCATGGCCATGGCGTCCATTTTGACACTACTGCCATTTCCGCCCTTTCACTCTCTAAATCCAAACTTCTTCAACTCTTCACCACTGATCTTATGTTTTCCTACACACCCAATCAATTCGTTTCACCCATCTACTCGTGCCCTCAAAACTGGCCCTGAAGGCAGTAGAATTCGAAGCCATCAAGAATATAGTTCCGATTTGCTGCGGAAACCGGTTGTTCCACCGGCGAAGGATTTGGCTGGACCATCGGAGGATGACGACAGCAGTGAGGAGAGTGGAAATGACGAGGAGGAGGAAGTGGATTGGGTTGATTGGGAGGACAAGATTTTGGAGGATACTGTTCCTCTGGTTGGCTTTGTTAGGATGGTTCTTCACACTGGAAAGTAAGCAACCATTGTTTCTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTGGCTTTTTAACTGAATTTGAACTTCCTGGTCAAATAGAAATTATGCAACCATATTCTTAGTGAATTTTTAACTTGCGTTTGTTCAAATGAAAACGTGTCACTCGAAGATGAACGGAACTATATCATTTGAGATCGATGTTACGGAACTCCTATGGAATGTTCATCAATTTCCATACCATAAGGACAAGAATTACGAATACCGTCAATTAATCTCTTCGAAGTTCATTGGTTTTATTCAATTTTTTTTAATTTGATTAATAATTGGGATACCCAAAGACTTTGAATCTAAAAAATTGATGAAAAAAAAGGCTCTTGCAACAGTAGATACTCAACCTATGACCCTTAGCCCATGGATACTGCTTGCAGCTCTCGCAATATGATCTTTATGAAAAAGGGTTTCAAAATATGAATGATTAAGAGGACTTCTATATCTTCTTAAAAAGATATGTAGTCTAAACCGGTAGTCAAGTTATTATACCTTCTCTCTCCTACTTATCTGATTAGGTGTTCGTAGCATGTATGCTGTTATCTCTTAGTAAGAGTTTCAAGTTGCTATTATTTCAGCATATCTCCTCAGACAAAATTATAACGTTTTATAGTTGTTTTTCTTCCCTTGGATGCAATTATAATGGTGGATCACAAATCTGAAAGAGAATATTTTGTCTTGGATTCATTAGCATGATGAAGTAGAGTTTAATCTCCATTCGTTAATCATCTTTAATCATACACCTGCAGATATGAAAGTGGGGATAGGTTGAGACCAGAACACGAGAAAACAATTCTTGAGAGGTTGCTTCCATATCATCCCGAGAGTGAGAAGAAGATTGGATGTGGGGTTGATTATATCACGGTATATCTCTCTCCGTACATATTTGTACATGTCATGTGTTTTGAGCTTATTTTTAGAATTTACATTTATGTAAAATAAAACAACTAATTAGTACTCTAGCCTGTAGCCTCTTTTTCTATTTCCTTGGATGAAAGAAAGCTCGTCTTGAATCTGGTAAAGAAACTAAATGTTCACAAGCAAGTATTTTATTACTTCTGATGAGGCATGCTGATTATTGCTGTTGTTGAGATCAACTTCAATCAGTTCATGATCTATACCGTGGATTTTTTTACAAGCTTAATTTGTAATGTTAAAATATTTGTCTATACTGTTCATCAACTTGTAAAGATATAAATTGTTGTCGAACAGAACACTTCTAAGAAAGGAAAACTTTCTTTTCCTTCTACTTGTTATGTACATTATCTGTGGATTTTTTTTCTTTCTAAAAGACATGCTTCCTGTGATATAAATGAAGAATGCATAATGGCGAGAAGGCATTGATAAGTGGCAACGGTTTGAATCTTTGTTGAAACATTGTATTTTCACTTGATTGTATATATGTGATACTGCCTAAAGGGTTATACCTTGACTTGAAGAACCTGCTTATGGGCAGTTCCATGTTCGTTTTTAAACTATTTTCTTTCGTATTATACTGGGCATTGGATATACGCTGTATTTGTTAACTGAAATGACCATGGCAATTTTTATTGGTGGTGTTGTGGTCGGCAGGTTGGATATCATCCTGATTTTGAAAGCTCAAGATGTTTATTCATAGTCAGAAAAGATGGAGAGTTGGTTGACTTTTCATATTGGAAGTGCATCAAGGGTCTGATCAGAAAGAACTATCCTCTTTACGCAGAAAGCTTCATTCTTAGGCATTTCCGGCGACGTAGACGCAATTTGCGTCGGTAACACCTGTAAGATCTGTTAATCATACTCTTGTATCATTCAATTTCAGGAATTCTTTGAATATCAAAGCTTGAGATTGACCAACCACGCTTGTGTGGTTCTCTTGTGTTTAATGACTTGAAATTAGCAAATCAAGATGGATATGGGGTGAATGTAGACTCTTGCTTAGTAAAATTCAATTTTGTA

mRNA sequence

GGAATGCGGATCGAAGAGAAATTCTATAGAATCTCCATTCCATGAGATTGATGATAATGTGAGCGACCGTTAACAGTTCTTCTTCCTCCGTTTTCTCAAAGAATTGGGAGAAAAGCCATGCTCCGAAATCGCACACTACCATTTCATTCTCGATAGTTGCAATTTCAAGCTCCTTGTCTCAATTGATCAAGGGCATGGCCATGGCGTCCATTTTGACACTACTGCCATTTCCGCCCTTTCACTCTCTAAATCCAAACTTCTTCAACTCTTCACCACTGATCTTATGTTTTCCTACACACCCAATCAATTCGTTTCACCCATCTACTCGTGCCCTCAAAACTGGCCCTGAAGGCAGTAGAATTCGAAGCCATCAAGAATATAGTTCCGATTTGCTGCGGAAACCGGTTGTTCCACCGGCGAAGGATTTGGCTGGACCATCGGAGGATGACGACAGCAGTGAGGAGAGTGGAAATGACGAGGAGGAGGAAGTGGATTGGGTTGATTGGGAGGACAAGATTTTGGAGGATACTGTTCCTCTGGTTGGCTTTGTTAGGATGGTTCTTCACACTGGAAAATATGAAAGTGGGGATAGGTTGAGACCAGAACACGAGAAAACAATTCTTGAGAGGTTGCTTCCATATCATCCCGAGAGTGAGAAGAAGATTGGATGTGGGGTTGATTATATCACGGTTGGATATCATCCTGATTTTGAAAGCTCAAGATGTTTATTCATAGTCAGAAAAGATGGAGAGTTGGTTGACTTTTCATATTGGAAGTGCATCAAGGGTCTGATCAGAAAGAACTATCCTCTTTACGCAGAAAGCTTCATTCTTAGGCATTTCCGGCGACGTAGACGCAATTTGCGTCGGTAACACCTGTAAGATCTGTTAATCATACTCTTGTATCATTCAATTTCAGGAATTCTTTGAATATCAAAGCTTGAGATTGACCAACCACGCTTGTGTGGTTCTCTTGTGTTTAATGACTTGAAATTAGCAAATCAAGATGGATATGGGGTGAATGTAGACTCTTGCTTAGTAAAATTCAATTTTGTA

Coding sequence (CDS)

ATGGCCATGGCGTCCATTTTGACACTACTGCCATTTCCGCCCTTTCACTCTCTAAATCCAAACTTCTTCAACTCTTCACCACTGATCTTATGTTTTCCTACACACCCAATCAATTCGTTTCACCCATCTACTCGTGCCCTCAAAACTGGCCCTGAAGGCAGTAGAATTCGAAGCCATCAAGAATATAGTTCCGATTTGCTGCGGAAACCGGTTGTTCCACCGGCGAAGGATTTGGCTGGACCATCGGAGGATGACGACAGCAGTGAGGAGAGTGGAAATGACGAGGAGGAGGAAGTGGATTGGGTTGATTGGGAGGACAAGATTTTGGAGGATACTGTTCCTCTGGTTGGCTTTGTTAGGATGGTTCTTCACACTGGAAAATATGAAAGTGGGGATAGGTTGAGACCAGAACACGAGAAAACAATTCTTGAGAGGTTGCTTCCATATCATCCCGAGAGTGAGAAGAAGATTGGATGTGGGGTTGATTATATCACGGTTGGATATCATCCTGATTTTGAAAGCTCAAGATGTTTATTCATAGTCAGAAAAGATGGAGAGTTGGTTGACTTTTCATATTGGAAGTGCATCAAGGGTCTGATCAGAAAGAACTATCCTCTTTACGCAGAAAGCTTCATTCTTAGGCATTTCCGGCGACGTAGACGCAATTTGCGTCGGTAA

Protein sequence

MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR

Homology

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BLAST of IVF0017334 vs. ExPASy Swiss-Prot
Match: Q9C642 (Protein DCL homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DCL PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.1e-68
Identity = 136/225 (60.44%), Postives = 168/225 (74.67%), Query Frame = 0


Query: 1   MAMASILTLLPF--PPFHSLNPNF-FNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIR 60
           M++ASI +  P   P F      F F+SSPL L FP     S  P  RAL+T  +G++I 
Sbjct: 1   MSLASIPSSSPVASPYFRCRTYIFSFSSSPLCLYFPRGDSTSLRPRVRALRTESDGAKIG 60

Query: 61  SHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVG 120
           + + Y S+LLR+P +   +     S +++  EE  N E +E  +VDWEDKILE TVPLVG
Sbjct: 61  NSESYGSELLRRPRIASEE-----SSEEEEEEEEENSEGDE--FVDWEDKILEVTVPLVG 120

Query: 121 FVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRC 180
           FVRM+LH+GKY + DRL PEHE+TI+E LLPYHPE EKKIGCG+DYI VG+HPDFESSRC
Sbjct: 121 FVRMILHSGKYANRDRLSPEHERTIIEMLLPYHPECEKKIGCGIDYIMVGHHPDFESSRC 180

Query: 181 LFIVRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRN 223
           +FIVRKDGE+VDFSYWKCIKGLI+K YPLYA+SFILRHFR+RR+N
Sbjct: 181 MFIVRKDGEVVDFSYWKCIKGLIKKKYPLYADSFILRHFRKRRQN 218

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BLAST of IVF0017334 vs. ExPASy Swiss-Prot
Match: Q42463 (Protein DCL, chloroplastic OS=Solanum lycopersicum OX=4081 GN=DCL PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 8.0e-67
Identity = 125/180 (69.44%), Postives = 147/180 (81.67%), Query Frame = 0


Query: 46  ALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSED---DDSSEESGNDEEEEVDWV 105
           A+KTG EG  IRS    +++LLRKPV+    +    SE+   ++S +E G    +   WV
Sbjct: 47  AVKTGSEGGGIRSD---NAELLRKPVISTELETTSESEELVKEESDDEVGKKSGDGEGWV 106

Query: 106 DWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVD 165
           DWED+ILEDTVPLVGFVRM+LH+GKY  GDRL P+H++TIL+RLLPYHPE +KKIG GVD
Sbjct: 107 DWEDQILEDTVPLVGFVRMILHSGKYAIGDRLSPDHQRTILQRLLPYHPECDKKIGPGVD 166

Query: 166 YITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRN 223
           YITVGYHPDFE+SRCLFIVRKDGE VDFSYWKCIKGLIRKNYPLYA+SFILRHFR+RRRN
Sbjct: 167 YITVGYHPDFENSRCLFIVRKDGETVDFSYWKCIKGLIRKNYPLYADSFILRHFRKRRRN 223

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BLAST of IVF0017334 vs. ExPASy Swiss-Prot
Match: Q5D869 (DNA-directed RNA polymerase V subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRPE1 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.7e-21
Identity = 46/116 (39.66%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 105  EDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYI 164
            E ++L D  P++  +R ++H   Y  GD +  + +  +LE++L +HP+ E K+G GVD+I
Sbjct: 1736 EQELLSDVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFI 1795

Query: 165  TVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRR 221
            TV  H  F  SRC F+V  DG   DFSY K +   + K YP  AE FI ++F + R
Sbjct: 1796 TVDKHTIFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMKKYPDRAEEFIDKYFTKPR 1851

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BLAST of IVF0017334 vs. ExPASy Swiss-Prot
Match: Q8L557 (Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana OX=3702 GN=EMB514 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.3e-04
Identity = 37/118 (31.36%), Postives = 58/118 (49.15%), Query Frame = 0


Query: 83  EDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTI 142
           E+   S++    EEE+   V    K    +V +  +    LH    +  D  + EH   +
Sbjct: 48  ENGGESKKQKVGEEEKSGPVKLGPKEFVTSVAMFDYFVKFLHFWPTDL-DVNKYEH-MVL 107

Query: 143 LERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI 201
           L+ +   H E EKKIG G+    V  HP ++ SRC F+VR+D    DFS+ KC+  ++
Sbjct: 108 LDLIKKGHSEPEKKIGGGIKTFQVRTHPMWK-SRCFFLVREDDTADDFSFRKCVDQIL 162

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BLAST of IVF0017334 vs. ExPASy Swiss-Prot
Match: P85936 (Protein DCL, chloroplastic (Fragment) OS=Pseudotsuga menziesii OX=3357 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.4e-04
Identity = 18/22 (81.82%), Postives = 21/22 (95.45%), Query Frame = 0


Query: 101 WVDWEDKILEDTVPLVGFVRMV 123
           WVDWED+IL+DTVPLV FVRM+
Sbjct: 2   WVDWEDQILQDTVPLVNFVRMI 23

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BLAST of IVF0017334 vs. ExPASy TrEMBL
Match: A0A5A7VDC9 (Protein DCL OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003370 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 9.3e-127
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ 60
           MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ
Sbjct: 1   MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ 60

Query: 61  EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR 120
           EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR
Sbjct: 61  EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR 120

Query: 121 MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180
           MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI
Sbjct: 121 MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180

Query: 181 VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR 226
           VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR
Sbjct: 181 VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR 225

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BLAST of IVF0017334 vs. ExPASy TrEMBL
Match: A0A1S3BVA4 (protein DCL, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493543 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 9.3e-127
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ 60
           MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ
Sbjct: 1   MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ 60

Query: 61  EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR 120
           EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR
Sbjct: 61  EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR 120

Query: 121 MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180
           MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI
Sbjct: 121 MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180

Query: 181 VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR 226
           VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR
Sbjct: 181 VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR 225

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BLAST of IVF0017334 vs. ExPASy TrEMBL
Match: A0A0A0L2D0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639820 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.2e-119
Identity = 212/225 (94.22%), Postives = 218/225 (96.89%), Query Frame = 0


Query: 1   MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ 60
           MAMASIL   PFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEG R+RSHQ
Sbjct: 1   MAMASILKPPPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGIRLRSHQ 60

Query: 61  EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR 120
           EYSSDLLRKPV P AKDLAGPSEDDDSSEESGN++EEEV+WVDWEDKILEDTVPLVGFVR
Sbjct: 61  EYSSDLLRKPVGPSAKDLAGPSEDDDSSEESGNEDEEEVEWVDWEDKILEDTVPLVGFVR 120

Query: 121 MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180
           MVLHTGKYE+GDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI
Sbjct: 121 MVLHTGKYENGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180

Query: 181 VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR 226
           VRKDGE+VDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRN RR
Sbjct: 181 VRKDGEMVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNSRR 225

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BLAST of IVF0017334 vs. ExPASy TrEMBL
Match: A0A6J1BTU2 (protein DCL homolog, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005680 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 6.3e-107
Identity = 192/224 (85.71%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 1   MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ 60
           MAMAS+    PFPPFHSLNP+F NSSP+ILCFP HP+ S HPS RALKTGPEGSRIRSH+
Sbjct: 1   MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHE 60

Query: 61  EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR 120
           EYSSDLLRKPVVPPAKD A  SEDD+ SEESG D EEE DWVDWEDKILEDTVPLVGFVR
Sbjct: 61  EYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEEDWVDWEDKILEDTVPLVGFVR 120

Query: 121 MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180
           MVLH+GKY SGDRL  EHEKTIL+RLLPYHPE EKKIGCG+DYIT+GYHPDFESSRCLFI
Sbjct: 121 MVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFI 180

Query: 181 VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLR 225
           VRKDGELVDFSYWKCIKGLIRKNYPL+AESFILRHFRRRRRN R
Sbjct: 181 VRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRRRNYR 224

[Close]

BLAST of IVF0017334 vs. ExPASy TrEMBL
Match: A0A6J1FFU9 (protein DCL homolog, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111443664 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.3e-101
Identity = 182/225 (80.89%), Postives = 202/225 (89.78%), Query Frame = 0


Query: 1   MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ 60
           +AMASIL   P  P HSLNPN  N+SP+I+CF THP+ SFHPS RALKTGPEGSRIRSH+
Sbjct: 3   LAMASILKPPPLVPLHSLNPNLLNASPVIVCFRTHPMTSFHPSIRALKTGPEGSRIRSHE 62

Query: 61  EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR 120
           EYSSDLLRKPVVPPA DLA PSED  SSEESGN +EEE +WVDWED+ILE+TVPLVGFVR
Sbjct: 63  EYSSDLLRKPVVPPAMDLATPSEDYSSSEESGNGDEEEEEWVDWEDRILEETVPLVGFVR 122

Query: 121 MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180
           MVLH+GKYESGDRL PEHEKTIL+RLL YHPE EKKIGCG+DYIT+GYHP+FE SRCLFI
Sbjct: 123 MVLHSGKYESGDRLTPEHEKTILDRLLSYHPECEKKIGCGIDYITIGYHPNFERSRCLFI 182

Query: 181 VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR 226
           VRKDGELVDFSYWKC++GLIRKNYPL+AESFILRHF+RRRR+  R
Sbjct: 183 VRKDGELVDFSYWKCMEGLIRKNYPLHAESFILRHFQRRRRHFFR 227

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BLAST of IVF0017334 vs. NCBI nr
Match: XP_008452556.1 (PREDICTED: protein DCL, chloroplastic [Cucumis melo])

HSP 1 Score: 461 bits (1187), Expect = 5.02e-164
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ 60
           MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ
Sbjct: 1   MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ 60

Query: 61  EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR 120
           EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR
Sbjct: 61  EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR 120

Query: 121 MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180
           MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI
Sbjct: 121 MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180

Query: 181 VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR 225
           VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR
Sbjct: 181 VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR 225

[Close]

BLAST of IVF0017334 vs. NCBI nr
Match: KAA0064386.1 (protein DCL [Cucumis melo var. makuwa] >TYK20201.1 protein DCL [Cucumis melo var. makuwa])

HSP 1 Score: 461 bits (1187), Expect = 5.12e-163
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ 60
           MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ
Sbjct: 1   MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ 60

Query: 61  EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR 120
           EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR
Sbjct: 61  EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR 120

Query: 121 MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180
           MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI
Sbjct: 121 MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180

Query: 181 VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR 225
           VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR
Sbjct: 181 VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR 225

[Close]

BLAST of IVF0017334 vs. NCBI nr
Match: XP_004141259.1 (protein DCL homolog, chloroplastic [Cucumis sativus] >KGN55194.1 hypothetical protein Csa_011993 [Cucumis sativus])

HSP 1 Score: 436 bits (1122), Expect = 4.09e-154
Identity = 212/225 (94.22%), Postives = 218/225 (96.89%), Query Frame = 0


Query: 1   MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ 60
           MAMASIL   PFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEG R+RSHQ
Sbjct: 1   MAMASILKPPPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGIRLRSHQ 60

Query: 61  EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR 120
           EYSSDLLRKPV P AKDLAGPSEDDDSSEESGN++EEEV+WVDWEDKILEDTVPLVGFVR
Sbjct: 61  EYSSDLLRKPVGPSAKDLAGPSEDDDSSEESGNEDEEEVEWVDWEDKILEDTVPLVGFVR 120

Query: 121 MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180
           MVLHTGKYE+GDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI
Sbjct: 121 MVLHTGKYENGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180

Query: 181 VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR 225
           VRKDGE+VDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRN RR
Sbjct: 181 VRKDGEMVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNSRR 225

[Close]

BLAST of IVF0017334 vs. NCBI nr
Match: XP_038897137.1 (protein DCL homolog, chloroplastic [Benincasa hispida])

HSP 1 Score: 409 bits (1051), Expect = 2.93e-143
Identity = 200/225 (88.89%), Postives = 210/225 (93.33%), Query Frame = 0


Query: 1   MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ 60
           MAMASIL   PF P HSLNPNFFNSSP+ILCFPT P+ SFH STRALKTGPEGSRIRSH+
Sbjct: 3   MAMASILKPPPFVPSHSLNPNFFNSSPVILCFPTQPMTSFHLSTRALKTGPEGSRIRSHE 62

Query: 61  EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR 120
           EYSSDLLRKPVVPPA+DLA  SEDDDSSEESGND+EEE DWVDWEDKILEDTVPLVGFVR
Sbjct: 63  EYSSDLLRKPVVPPARDLARLSEDDDSSEESGNDDEEEEDWVDWEDKILEDTVPLVGFVR 122

Query: 121 MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180
           MVLH+GKY SGDRL PEHEKTIL+RLLPYHPESEKKIGCG+DYIT+GYHPDFESSRCLFI
Sbjct: 123 MVLHSGKYGSGDRLNPEHEKTILDRLLPYHPESEKKIGCGIDYITIGYHPDFESSRCLFI 182

Query: 181 VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR 225
           VRKDGELVDFSYWKCIKGLIRK YPL+AESFILRHFRRRRRN RR
Sbjct: 183 VRKDGELVDFSYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR 227

[Close]

BLAST of IVF0017334 vs. NCBI nr
Match: XP_022133006.1 (protein DCL homolog, chloroplastic [Momordica charantia])

HSP 1 Score: 396 bits (1017), Expect = 4.14e-138
Identity = 192/224 (85.71%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 1   MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ 60
           MAMAS+    PFPPFHSLNP+F NSSP+ILCFP HP+ S HPS RALKTGPEGSRIRSH+
Sbjct: 1   MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHE 60

Query: 61  EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR 120
           EYSSDLLRKPVVPPAKD A  SEDD+ SEESG D EEE DWVDWEDKILEDTVPLVGFVR
Sbjct: 61  EYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEEDWVDWEDKILEDTVPLVGFVR 120

Query: 121 MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180
           MVLH+GKY SGDRL  EHEKTIL+RLLPYHPE EKKIGCG+DYIT+GYHPDFESSRCLFI
Sbjct: 121 MVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFI 180

Query: 181 VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLR 224
           VRKDGELVDFSYWKCIKGLIRKNYPL+AESFILRHFRRRRRN R
Sbjct: 181 VRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRRRNYR 224

[Close]

BLAST of IVF0017334 vs. TAIR 10
Match: AT1G45230.1 (Protein of unknown function (DUF3223) )

HSP 1 Score: 261.2 bits (666), Expect = 7.9e-70
Identity = 136/225 (60.44%), Postives = 168/225 (74.67%), Query Frame = 0


Query: 1   MAMASILTLLPF--PPFHSLNPNF-FNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIR 60
           M++ASI +  P   P F      F F+SSPL L FP     S  P  RAL+T  +G++I 
Sbjct: 1   MSLASIPSSSPVASPYFRCRTYIFSFSSSPLCLYFPRGDSTSLRPRVRALRTESDGAKIG 60

Query: 61  SHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVG 120
           + + Y S+LLR+P +   +     S +++  EE  N E +E  +VDWEDKILE TVPLVG
Sbjct: 61  NSESYGSELLRRPRIASEE-----SSEEEEEEEEENSEGDE--FVDWEDKILEVTVPLVG 120

Query: 121 FVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRC 180
           FVRM+LH+GKY + DRL PEHE+TI+E LLPYHPE EKKIGCG+DYI VG+HPDFESSRC
Sbjct: 121 FVRMILHSGKYANRDRLSPEHERTIIEMLLPYHPECEKKIGCGIDYIMVGHHPDFESSRC 180

Query: 181 LFIVRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRN 223
           +FIVRKDGE+VDFSYWKCIKGLI+K YPLYA+SFILRHFR+RR+N
Sbjct: 181 MFIVRKDGEVVDFSYWKCIKGLIKKKYPLYADSFILRHFRKRRQN 218

[Close]

BLAST of IVF0017334 vs. TAIR 10
Match: AT1G45230.2 (Protein of unknown function (DUF3223) )

HSP 1 Score: 258.1 bits (658), Expect = 6.7e-69
Identity = 135/225 (60.00%), Postives = 167/225 (74.22%), Query Frame = 0


Query: 1   MAMASILTLLPF--PPFHSLNPNF-FNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIR 60
           M++ASI +  P   P F      F F+SSPL L FP     S  P  RAL+T  +G++I 
Sbjct: 1   MSLASIPSSSPVASPYFRCRTYIFSFSSSPLCLYFPRGDSTSLRPRVRALRTESDGAKIG 60

Query: 61  SHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVG 120
           + + Y S+LLR+P +   +     S +++  EE  N E +E  +VDWEDKILE TVPLVG
Sbjct: 61  NSESYGSELLRRPRIASEE-----SSEEEEEEEEENSEGDE--FVDWEDKILEVTVPLVG 120

Query: 121 FVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRC 180
           FVRM+LH+GKY + DRL PEHE+TI+E LLPYHPE EKKIGCG+DYI V +HPDFESSRC
Sbjct: 121 FVRMILHSGKYANRDRLSPEHERTIIEMLLPYHPECEKKIGCGIDYIMVWHHPDFESSRC 180

Query: 181 LFIVRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRN 223
           +FIVRKDGE+VDFSYWKCIKGLI+K YPLYA+SFILRHFR+RR+N
Sbjct: 181 MFIVRKDGEVVDFSYWKCIKGLIKKKYPLYADSFILRHFRKRRQN 218

[Close]

BLAST of IVF0017334 vs. TAIR 10
Match: AT3G46630.1 (Protein of unknown function (DUF3223) )

HSP 1 Score: 134.8 bits (338), Expect = 8.6e-32
Identity = 59/118 (50.00%), Postives = 80/118 (67.80%), Query Frame = 0


Query: 101 WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCG 160
           W + E +IL D  P+    + +LH+ +Y  G+RL  E EK ++E+LLPYHP S+ KIGCG
Sbjct: 87  WKNLEAEILRDIEPISLLAKEILHSDRYLDGERLDFEDEKIVMEKLLPYHPYSKDKIGCG 146

Query: 161 VDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRR 219
           +D+I V  HP F  SRCLF+VR DG  +DFSY KC++  +R  YP +AE FI  HF+R
Sbjct: 147 LDFIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLRAYVRDKYPSHAERFIREHFKR 204

[Close]

BLAST of IVF0017334 vs. TAIR 10
Match: AT2G40030.1 (nuclear RNA polymerase D1B )

HSP 1 Score: 102.1 bits (253), Expect = 6.1e-22
Identity = 46/116 (39.66%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 105  EDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYI 164
            E ++L D  P++  +R ++H   Y  GD +  + +  +LE++L +HP+ E K+G GVD+I
Sbjct: 1736 EQELLSDVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFI 1795

Query: 165  TVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRR 221
            TV  H  F  SRC F+V  DG   DFSY K +   + K YP  AE FI ++F + R
Sbjct: 1796 TVDKHTIFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMKKYPDRAEEFIDKYFTKPR 1851

[Close]

BLAST of IVF0017334 vs. TAIR 10
Match: AT5G62440.1 (Protein of unknown function (DUF3223) )

HSP 1 Score: 46.6 bits (109), Expect = 3.1e-05
Identity = 37/118 (31.36%), Postives = 58/118 (49.15%), Query Frame = 0


Query: 83  EDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTI 142
           E+   S++    EEE+   V    K    +V +  +    LH    +  D  + EH   +
Sbjct: 48  ENGGESKKQKVGEEEKSGPVKLGPKEFVTSVAMFDYFVKFLHFWPTDL-DVNKYEH-MVL 107

Query: 143 LERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI 201
           L+ +   H E EKKIG G+    V  HP ++ SRC F+VR+D    DFS+ KC+  ++
Sbjct: 108 LDLIKKGHSEPEKKIGGGIKTFQVRTHPMWK-SRCFFLVREDDTADDFSFRKCVDQIL 162

The following BLAST results are available for this feature:

BLAST of IVF0017334 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C642	1.1e-68	60.44	Protein DCL homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DCL PE=2 S...	[more]
Q42463	8.0e-67	69.44	Protein DCL, chloroplastic OS=Solanum lycopersicum OX=4081 GN=DCL PE=2 SV=1	[more]
Q5D869	8.7e-21	39.66	DNA-directed RNA polymerase V subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRPE1...	[more]
Q8L557	4.3e-04	31.36	Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana OX=3702 GN=EMB514 PE=1 SV=1	[more]
P85936	7.4e-04	81.82	Protein DCL, chloroplastic (Fragment) OS=Pseudotsuga menziesii OX=3357 PE=1 SV=1	[more]

BLAST of IVF0017334 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VDC9	9.3e-127	100.00	Protein DCL OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003370 P...	[more]
A0A1S3BVA4	9.3e-127	100.00	protein DCL, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493543 PE=4 SV=1	[more]
A0A0A0L2D0	3.2e-119	94.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639820 PE=4 SV=1	[more]
A0A6J1BTU2	6.3e-107	85.71	protein DCL homolog, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11100568...	[more]
A0A6J1FFU9	2.3e-101	80.89	protein DCL homolog, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of IVF0017334 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452556.1	5.02e-164	100.00	PREDICTED: protein DCL, chloroplastic [Cucumis melo]	[more]
KAA0064386.1	5.12e-163	100.00	protein DCL [Cucumis melo var. makuwa] >TYK20201.1 protein DCL [Cucumis melo var...	[more]
XP_004141259.1	4.09e-154	94.22	protein DCL homolog, chloroplastic [Cucumis sativus] >KGN55194.1 hypothetical pr...	[more]
XP_038897137.1	2.93e-143	88.89	protein DCL homolog, chloroplastic [Benincasa hispida]	[more]
XP_022133006.1	4.14e-138	85.71	protein DCL homolog, chloroplastic [Momordica charantia]	[more]

BLAST of IVF0017334 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G45230.1	7.9e-70	60.44	Protein of unknown function (DUF3223)	[more]
AT1G45230.2	6.7e-69	60.00	Protein of unknown function (DUF3223)	[more]
AT3G46630.1	8.6e-32	50.00	Protein of unknown function (DUF3223)	[more]
AT2G40030.1	6.1e-22	39.66	nuclear RNA polymerase D1B	[more]
AT5G62440.1	3.1e-05	31.36	Protein of unknown function (DUF3223)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF11523	DUF3223	coord: 121..196 e-value: 3.1E-29 score: 101.5
None	No IPR available	GENE3D	3.10.450.40		coord: 110..199 e-value: 1.2E-25 score: 91.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..99
None	No IPR available	PANTHER	PTHR33415:SF15	PROTEIN DCL HOMOLOG, CHLOROPLASTIC	coord: 19..222
IPR044673	Protein DCL-like	PANTHER	PTHR33415	FAMILY NOT NAMED	coord: 19..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0017334.1	IVF0017334.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:1901259	chloroplast rRNA processing
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003729	mRNA binding